BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G18600.1
Length=6153
Score E
Sequences producing significant alignments: (Bits) Value
Ahg492998 jgi|Araly1|492998|fgenesh2_kg.7__2431__AT4G18600.1 4595 0.0
> Ahg492998 jgi|Araly1|492998|fgenesh2_kg.7__2431__AT4G18600.1
Length=6092
Score = 4595 bits (2488), Expect = 0.0
Identities = 3047/3316 (92%), Gaps = 41/3316 (1%)
Strand=Plus/Plus
Query 2851 ATGGAAGGAGTCTTGTCAGAAAAGTCTCCCGAAACGTATCCTTCTTTGTCAGAATTGCCT 2910
||| |||| ||||| |||||||| || |||||| ||| |||||||| |||||||||
Sbjct 2804 ATGAAAGG-TTCTTGCCAGAAAAGCCTTTCGAAACATATTCTTCTTTGGCAGAATTGCAG 2862
Query 2911 GAAGAAAAGATTTTGGATGAAGAAGCTGATGATGCCATGCACCCATGTCTTTCTGAAGCT 2970
||||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||
Sbjct 2863 GAAGAAAAGATTTTGCATGAAGAAGCTGATGATGGTATGCGCCCATGTCTTTCTGAAGCT 2922
Query 2971 GTTAGTGATGAACAAAGCTCACCTAACGTTCTTGGTTCCACAAATTCGCCTGTGGCAGAA 3030
||| ||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 2923 TTTACTGATGAACAAATCTCACCTAAAGTTCTTGATTCCACAAATTCGCCTGTGGCAGAA 2982
Query 3031 GCTGTTCCACAAGCGCAAATCTCAGTTGAAGAATTTGTTGGCATAGATCCATGTTTGGTA 3090
||||||||||| | |||| | || ||||||| |||||||||| ||||||||||||||||
Sbjct 2983 GCTGTTCCACATGAACAAACCACACTTGAAGATTTTGTTGGCAGAGATCCATGTTTGGTA 3042
Query 3091 GAAGCTGTTCCTGATATGAGGGATTTGCCAGAAGAACATATCACCTCATGTATCTATTTA 3150
|||||||||| ||||| ||||| ||||||||||||||| ||||||||||||||||||||
Sbjct 3043 GAAGCTGTTCATGATAAGAGGGTTTTGCCAGAAGAACAGGTCACCTCATGTATCTATTTA 3102
Query 3151 ACAAATGTGGTGCCTATCGAAGAAGTCTTGCCAGAAGAACCTTTTGAAGCGTGTGCATCT 3210
||||||||||||||||| |||||||||||||||||||||||||| || | ||||||||||
Sbjct 3103 ACAAATGTGGTGCCTATTGAAGAAGTCTTGCCAGAAGAACCTTTAGATGTGTGTGCATCT 3162
Query 3211 TTGGGAAAATTGCCTAAAGATAAGATCTCACAAGAAGAATCTGATGAGGCTACACATACG 3270
|||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |
Sbjct 3163 TTGGGAAAATTGCCTAAAGATAAGATCTCACAAGAAAAATCTGATGAGGCTATTCAT-C- 3220
Query 3271 TTGTCTTGTGCCAAAGCTGAAAGTGATGAACATGTCTCACTGGAAGTTCTTAATTCCA-C 3329
||||||||||||| |||||||| ||||| || |||||||| |||||||| ||| || |
Sbjct 3221 -CGTCTTGTGCCAAAACTGAAAGTCATGAAAATTTCTCACTGCAAGTTCTTGATT-CATC 3278
Query 3330 AAATTTGTCTGCGGCAGAAGCTATTCCAAATGAGCAAGTCACACTTGACGAATTTGTTGG 3389
||||||||||| |||||||||||||||| |||| ||| |||||||||||||||||||||
Sbjct 3279 AAATTTGTCTGTGGCAGAAGCTATTCCACATGAACAAACCACACTTGACGAATTTGTTGG 3338
Query 3390 CATAGATCCGTGTTTGGGAGAAGTTGTTCTTGATG-AAGAGGTTTTGCCAGAACAACTTG 3448
| ||||||||||||||||||||| ||||||||||| ||| ||||||||||||| ||||||
Sbjct 3339 CGTAGATCCGTGTTTGGGAGAAGCTGTTCTTGATGAAAG-GGTTTTGCCAGAAGAACTTG 3397
Query 3449 ACACCACATGTCGGTCTTTGACGAAAGCTGCGCCCATC-ATGACAATCTTTCCAGAAGAA 3507
|||||||||||| |||||||| ||||| ||||||||| | ||||||||||||||||||
Sbjct 3398 ACACCACATGTCTGTCTTTGAAAAAAGCCGCGCCCATCGA-AACAATCTTTCCAGAAGAA 3456
Query 3508 CCTCCGGAAGTGTATCCTTCTTTGGAAGAATTGCCAGAAGAAAAGATCGCACAAGAAGAA 3567
||||| |||||||||||||||||||||||||||||||||||||||||| | |||| | ||
Sbjct 3457 CCTCCCGAAGTGTATCCTTCTTTGGAAGAATTGCCAGAAGAAAAGATCTCGCAAG-A-AA 3514
Query 3568 GAAGTTGATGATGCTACTCATCCATATTTTTCTGAAGCTGTTTGTGATGAGAAGATCCCG 3627
|| || | ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3515 -AA---GA--A-GCTACTCATCCATATTTTTCTGAAGCTGTTTGTGATGAGAAGATCTCA 3567
Query 3628 CCACTGGAAGATCCTGGTTCCACACATCCATCTTTGGAAGAATCCGTTCCGTAT-GAGGA 3686
|||||||||||||||||||||||||||||||||||||||||||||| | ||| | ||||
Sbjct 3568 CCACTGGAAGATCCTGGTTCCACACATCCATCTTTGGAAGAATCCGATACGT-TCGAGG- 3625
Query 3687 AG-CCTCGCATGAAGAACTTGTTGGCACAAATCCATTTTTGGAATCAGCTTTTCCCAACG 3745
|| |||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||
Sbjct 3626 AGACCTCGCATGAAGAACTTGTTGGAACAAATCCATTTTTGGAATTAGCTGTTCCCAACG 3685
Query 3746 AAATCGGTTTTCCAGACGAACCTGGCGTCACATATCGGTCT-TCGGCAGAAGCTGTTTCT 3804
|||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 3686 AAATGGGTTTTCCAGACGAACCTGGCGTCACATATCGGTCTGT-GGCAGAAGCTGTTTCT 3744
Query 3805 AAGGAAAAGAACTTGCCAGAAGAATCCTTACCTACATATCCGTCTTGGGCAGAAGTTGTA 3864
|||| |||||||||||| |||||| |||||||||| ||||||||||||||||| ||||||
Sbjct 3745 AAGGGAAAGAACTTGCCGGAAGAACCCTTACCTACTTATCCGTCTTGGGCAGATGTTGTA 3804
Query 3865 CCTGATGAAAAGATCTCTCGAGAAGAACTTGATTCCACATATCCATCTTCTGCAGAAGCT 3924
|||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||
Sbjct 3805 CCTGATGAAAAGATCTCTGGAGAAGAACTTCATTCCACAAATCCATCTTCTGCAGAAGCA 3864
Query 3925 GTTTTTGATGAAAATATCTCAGGCTCAGAAGCTCCTGGTTCCACAACAGAAACTGG-TCG 3983
|||||| | ||||| ||| |||||||||||||| || |||||||||||||||| || ||
Sbjct 3865 GTTTTTAAAGAAAAGATCCCAGGCTCAGAAGCTTCTAGTTCCACAACAGAAAC-GGTTCC 3923
Query 3984 ACAAAACAAAACCTTCCCTGAAAAAACTTTTGCCACGGAAAATTCCTTGAACGAAGCAGT 4043
||| |||||||||||||||||| || ||||||||| ||||||||||||||| ||||||||
Sbjct 3924 ACACAACAAAACCTTCCCTGAAGAACCTTTTGCCATGGAAAATTCCTTGAATGAAGCAGT 3983
Query 4044 TTTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTACTTCCACAACAGAAACTGGTCCACA 4103
|||||||||||||||| |||||||||||||||||| |||||| ||||||||| ||||||
Sbjct 3984 TTTTGATGAAAAGATCTCAGGCTCAGAAGCTTCTAGTTCCACTACAGAAACTAATCCACA 4043
Query 4104 CAACAAAACCTTCCCTGAAGAACCTTTTGCCATGGAAAATTTCTTGAACGAAGCAGTTTT 4163
||||||||||||| |||||||||||||||||| |||||||| | |||| ||||||| |||
Sbjct 4044 CAACAAAACCTTCACTGAAGAACCTTTTGCCACGGAAAATTCCCTGAAAGAAGCAGATTT 4103
Query 4164 TGATGAAAAGATCCCAGGCTCAGAAGCTCCTGTTTCCACAACAGAAACTGGTCTACACAA 4223
||||||||||||||| || ||||||||||||| ||| |||| |||||||||| ||||||
Sbjct 4104 TGATGAAAAGATCCCTGGTTCAGAAGCTCCTGGTTCTGCAACCGAAACTGGTCCACACAA 4163
Query 4224 TGAAA-CCTTCAC-TGAAGAACCTGTTGCCACAGATATTTCCTTGAACGAAGCAGTTTTT 4281
||| | ||| | ||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct 4164 -CAAATCATTC-CTTGAAGAACCTGTTGCCAGAGATATTTCCTTGAACGAAGCAGTTGTT 4221
Query 4282 GGTGAAATTATCCCAGGCTCAGAAGCTCCTGGTTCCGCAACAGAAACTGGTCTACACAAC 4341
| ||||| |||||||||||||||||| || ||||| ||| |||||||| || |||||||
Sbjct 4222 GATGAAAAGATCCCAGGCTCAGAAGCTTCTTGTTCCACAAGAGAAACTGTTCCACACAAC 4281
Query 4342 AAAACCTTCCCTGAAAAACCTTTTGCCACGGATCTTT-CTTTAAAAGAAGCAGTTTTTGA 4400
|||||||||||| | ||||| ||||||| ||||||| ||| | |||| ||||||||
Sbjct 4282 GAAACCTTCCCTGGAGAACCTGTTGCCACAGATCTTTCCTTGGTCA-AAGCTGTTTTTGA 4340
Query 4401 TGAAAAGATCCCAGGCTCAGAAGCTTCTAGTTCCACAACAGAAACTAGTCCACACAACAA 4460
||||| ||||||||||||||||| |||||||||| ||| |||||| ||| |||||||||
Sbjct 4341 TGAAAGGATCCCAGGCTCAGAAGATTCTAGTTCCTCAATAGAAACCGGTCTACACAACAA 4400
Query 4461 AACCTTCCCTAGAGAAACTATTACCACAGATCTGTCCTCGACCGAAGCTGTTTTTGATGA 4520
|||||||||| ||||| || || |||| || ||||||| ||||||||||| |||||||||
Sbjct 4401 AACCTTCCCTGGAGAACCTGTTGCCACGGAGCTGTCCTTGACCGAAGCTGGTTTTGATGA 4460
Query 4521 AAAGATCACAGGCTCAGGAGTTCCTAGTTTCACAACAGAAACTGGTTCACACAACAAATG 4580
||||||| | ||||||| || |||||||| |||||||||||||||| |||||||||||
Sbjct 4461 AAAGATCCCCGGCTCAGAAGCTCCTAGTTCCACAACAGAAACTGGTCCACACAACAAAAC 4520
Query 4581 CTTCCCTGAAGAACCTGTTCCCAAGGAAAATATTCTGCCAAAAGAACCTGCTGCTGCATA 4640
||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 4521 CTTCCCTGAAGAACCTGTTACCAACGAAAATATTCTGCCAAAAGAACCTGCTGCTGCATA 4580
Query 4641 TCTGGCTTTGGCTGAAGGTATTCCTGACCAAAAAGTATTCTTGGATGATGCCGCACTTTT 4700
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4581 TCTGGCTTTGGCTGAAGGTATTCCTGACCAAAAAGTATTCTTGGATGATGCCGCACTTTT 4640
Query 4701 GTTATTTGCAGAAGCTATTTTCGATCAAAAGTTTTCACCAGAAGTTCCGGATTCCACGTA 4760
||||||||||||||||||||||||||||||||||||||||||| |||| |||||||| ||
Sbjct 4641 GTTATTTGCAGAAGCTATTTTCGATCAAAAGTTTTCACCAGAATTTCCAGATTCCACATA 4700
Query 4761 TCCTTCTTTGAAAGAACCAGAAATGCATGTTGCCGCACCATGTGTAGTAACAGATCTTCC 4820
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct 4701 TCCTTCTTTGAAAGAACCAGAAATGCATGTTGCCGCACCATCTTTAGTAACAGATCTTCC 4760
Query 4821 TGCTAAAAACATCAAGGTAAAAGAAGGTGAAGTACATAATGAGCCCTACACAGCATCTGA 4880
|||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||
Sbjct 4761 TGCTAAAAACATCAAGGTAAAAGAAGGTGAAGTACATAATGAACCTTACTCAGCATCTGA 4820
Query 4881 TGTTTCTATGAATCAGAAGAGTGGTTTATTGGAACCAGAATCTACTGAAAGAACATTTCC 4940
||||||||||| ||||||||||||||||||||||| || ||||||||||||||| ||||
Sbjct 4821 CGTTTCTATGAACCAGAAGAGTGGTTTATTGGAACCGGAGTCTACTGAAAGAACAATTCC 4880
Query 4941 CTCGAGCGGTGGTACTGTTACGATTTCTCCAGATACTCAGAATTCTCTTCCAAATGGTAC 5000
|||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 4881 CTCGAGTGGTGGTACTGACACGATTTCTCCAGATACTCAGAAATCTCTTCCAAATGGTAC 4940
Query 5001 AAGTGTTGAATCAATAAGTATATGGAGCAATGGAGGACTCCTTGGACTCGCGCCATTGAA 5060
||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 4941 AAGTGTTGAATCAATCAGTATATGGAGCAATGGAGGACTCCTTGGACTTGCGCCATTGAA 5000
Query 5061 ACCTCCAGTATTTGCTGAGCCTAATTCTGGAAGCCAACATATAAAGCACGAGATCAACGA 5120
||||||||| ||||||||||||||| ||||||||||||||||| || |||||||||||||
Sbjct 5001 ACCTCCAGTTTTTGCTGAGCCTAATGCTGGAAGCCAACATATACAGAACGAGATCAACGA 5060
Query 5121 AGCTAGTGTTCTTTCGACAAGGAAGCAGGAATCATCGAGCCGATCAGTTGAAAATGCTGA 5180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||
Sbjct 5061 AGCTAGTGTTCTTTCGACAAGGACGCAGGAATCATCGAGCCGATCAGTTGAAAATACTGA 5120
Query 5181 GAAGAGCTCACTTCCATTAATTGTTTCAGATCCCACGTCTCAACAACAAAGCAACATGTC 5240
||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||
Sbjct 5121 GAAGAGCTCACTTCCATTAGTTGTTTCAGATCCCACGTCTCAACAACACAGCAACATGTC 5180
Query 5241 GAGTCTCTCTCCCATGCAGAGCACTGGAACATCGTTCAGAGTTTTTGGCTTAAGTCATAG 5300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 5181 GAGTCTCTCTCCCATGCAGAGCACTGGAACATCATTCAGAGTTTTTGGCTTAAGTCATAG 5240
Query 5301 ATTACTCATGGCTGGGTTTCGGGGAAACTCTTCTTCAACTTGCAAATTTGAATCTGTACC 5360
||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |||||
Sbjct 5241 ATTACTCATGGCTGGGTTTGGGGGAAACTCTTCTTCATCTTGCAAATTTGAATCCGTACC 5300
Query 5361 TAGTAGTAGCTATGATA-CCAGAGTAGCTGCTATCGAAGACAGGACTCAGCAAAGTCCTG 5419
||||||||||||| || || ||||||| ||||||||||||| ||||||||||| |||||
Sbjct 5301 AAGTAGTAGCTATG-TAACCGGAGTAGCAGCTATCGAAGACAAGACTCAGCAAACTCCTG 5359
Query 5420 GTGGTTCAAGCTTTGAGGAGCAATTGGATTATGAATCATCTCTCTTTGGCTCACCTACTT 5479
|||| ||||||| ||||||||||| |||||||||||||||||||||||| || |||||||
Sbjct 5360 GTGGCTCAAGCTATGAGGAGCAATGGGATTATGAATCATCTCTCTTTGGTTCGCCTACTT 5419
Query 5480 CATCCCCACCGGTTGAACATATGAAAATATCATTCAACCCAATAGAAGCCTCTCCAGTTC 5539
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5420 CATCACCACCGGTTGAACATATGAAAATATCATTCAACCCAATAGAAGCCTCTCCAGTTC 5479
Query 5540 CTAAATTGAAACTGAGAATCCCATGCCAACCTCGGTACAATGGTGAAAATGCGGATATGT 5599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5480 CTAAATTGAAACTGAGAATCCCATGCCAACCTCGGTACAATGGTGAAAATGCGGATATGT 5539
Query 5600 TCCCTTCGTTTCAGTTGGTTCCAGAGGCTAGCAACTCTGATGACGGCGATGACAACAGTG 5659
|||||||||||||| ||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct 5540 TCCCTTCGTTTCAGCTGGTTCCAGAGGCTAGCAACTCTGAAGACGACGACGACAACAGTG 5599
Query 5660 ACACCTTTTGTCAGTCATCTCCTTGTGTTTCCGACTATTGTTTGTCAGATTCTGAGCTGT 5719
||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||| |
Sbjct 5600 ACACCTTTTGTCAGTCATCTCCTTGTGCTTCTGACAATTGTTTGTCAGATTCTGAGCTAT 5659
Query 5720 GGGAATCTGATGAAAGCCCTAGAATATCTGTATCAAGCTTGAAGCAAGTTGAAGAGAGAA 5779
|||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 5660 GGGAATCTGATGAAAGCCCTAGAAAATCTGTATCAAGCTTAAAGCAAGTTGAAGAGAGAA 5719
Query 5780 GTAGACATGGTGATATGGGTTCTTTTTCTGGTTCGTTTCTTGATCTCCCATGTTACGACG 5839
|||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct 5720 GTAGACATGGCGATATGGGTTCTTTTTCTGGTTCACTTCTTGATCTTCCATGTTACGACG 5779
Query 5840 CCGTAGATCATCAATCCACATTTTCAAGACTAGAGCAAGAACAAGTTCCGGAATACAAAC 5899
| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct 5780 CTGTAGATCATCAATCCACATCTTCAAGACTAGAGCAAGAACAAGTTCCAGAATACAAAC 5839
Query 5900 CATCTGTCTCAGAGATCATCCGTGC-TTGGCCACCAAACCAACCAAAAAGCAGTCCCTGT 5958
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| ||
Sbjct 5840 CATCTGTCTCAGAGATCATCCGT-CATTGGCCACCAAACCAACCAAAAAGCAGTCCCAGT 5898
Query 5959 AATGAAGCAAACGTAGACGCAAACACGGTGTC-GAAGAAAACGCAAGATCAATCTCTTGG 6017
|||||||||||| |||||||||||||||| || |||||||||||||||||||||||| ||
Sbjct 5899 AATGAAGCAAACTTAGACGCAAACACGGT-TCTGAAGAAAACGCAAGATCAATCTCTCGG 5957
Query 6018 GCTTGTAGCTACAGATGACGAGGGTGGTGATAGTGTTTGTCTTGATGAACATAAAACCA- 6076
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 5958 ATTTGTAGCTACAGATGACGACGGTGGTGATAGTGTTTGTCTTGATGAACATAAAACCAG 6017
Query 6077 AAGGGATCTAATTGATTCTTTGTTGTACATTCCTCTCTGTCATTTCAGTTTTCATGTTAA 6136
|||| |||||||||||||||||||||||||||||||||||||||||| |||||| || ||
Sbjct 6018 AAGG-ATCTAATTGATTCTTTGTTGTACATTCCTCTCTGTCATTTCAATTTTCAGGTAAA 6076
Query 6137 CACAAGCACTATTTAT 6152
|||| ||||||||||
Sbjct 6077 AACAAACACTATTTAT 6092
Score = 4224 bits (2287), Expect = 0.0
Identities = 2655/2833 (94%), Gaps = 23/2833 (1%)
Strand=Plus/Plus
Query 1 ATGCCGTTGGTGAGGTTCAAGATACGGAACGAGCTAAGCTTAGGTGGGCCGGAGATTCAA 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGCCGTTGGTGAGGTTCAAGATACGGAACGAGCTAAGCTTAGGTGGGCCGGAGATTCAA 60
Query 61 CGTAGCGCCTCCGTGGAAGATGAGGAACCTAAGGCGATTCTCGGCGCTGTTGAAGTAGCT 120
||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 61 CGTAGCGCCGCCGTGGAAGATGAAGAACCTAAGGCGATTCTCGGCGCTGTTGAAGTGGCT 120
Query 121 GGACTCATCGGTATTCTTCGTCAGTTAGGCGATCTCGCTGAATTTTCTGCAGAAGTATTT 180
|||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 121 GGACTCATCGGTATCCTTCGTCAGTTAGGCGATCTCGCTGAATTTTCCGCAGAAGTATTT 180
Query 181 AACGGCTTACAAGAAGAAGTAACTGTAACGGCATCTAGGTGTCAGAAGTTGACAAGCCGT 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 AACGGCTTACAAGAAGAAGTAACTGTAACGGCATCTAGGTGTCAGAAGTTGACAAGCCGT 240
Query 241 GTTAGACGGATAGAGTCAGCGCTCTCACCTCTTGAAAAGGCTGTTCTATCGCAGACAAGC 300
||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||
Sbjct 241 GTTAGACGGATAGAGTCAGCGCTTTCACCTCTTGAAAAGGCTGTTCTCTCACAGACAAGC 300
Query 301 CACATACATTTTGCATACACTGCAGGCTCTGAGTGGCATCCTCGTATAAGGAATGGACAT 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 301 CACATACATTTTGCATACACAGCAGGCTCTGAGTGGCATCCTCGTATAAGGAATGGACAT 360
Query 361 AGTCATTTTGTTCAGAGTGATTTGCCTCTGTGTGTTATGGAAAGTTATGAGCAATGCAGA 420
||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||||
Sbjct 361 AGTCATTTTGTTCAGAGTGATTTACCACTGTGTGTTATGGAAAGTTATGAACAATGCAGA 420
Query 421 GATCCTCCTCCTTTGCATCTGCTTGACCGATTTGCTGTAGGTGGTCCTGGATCGTGTCTG 480
||||||||||| |||||||||||||| |||||||| | ||||||||||||||||||||||
Sbjct 421 GATCCTCCTCCGTTGCATCTGCTTGAACGATTTGCCGAAGGTGGTCCTGGATCGTGTCTG 480
Query 481 AGAAAATACTCAGACCCAACATTCTTTAGAAAGGAGTTAAGCAACCCCAGTAAAACAGAT 540
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 481 AGAAAATACTCAGACCCAACATTCTTTAGAAAGGAATTAAGCAACCCCAGTAAAACAGAT 540
Query 541 GATATCAAAGTCCAGAGAGATCAGGCTCACCGCAAAAGAAAGAAAAAGAGGTTACCACAA 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GATATCAAAGTCCAGAGAGATCAGGCTCACCGCAAAAGAAAGAAAAAGAGGTTACCACAA 600
Query 601 AGAAACATTTGCAGATCAAATGCAGTGTCTACATCTGATGAAACTAATGGCGCTCATCTC 660
|||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||
Sbjct 601 AGAAACATTTGCAGATCAAATGCAGTGTCTACATCTGACGAAACTAGTGGGGCTCATCTC 660
Query 661 AGTTCTTTTACTGATGACAGACCAACAACTTCTCGGAGTACGTCCACAGTTGACATGCCA 720
||| | ||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct 661 AGTAATCTTACTGATGACAGACAAACAACTTCTCAGAGTACGTCCACAGTTGACATGCCA 720
Query 721 CGTAGCTCTAATATGCAAGATTTATCGGATATTGTAGACCAATCTTATCTGCAAGGGCAG 780
|||||||||||||||||||||||||| |||| ||||||||||||| ||||||||||||||
Sbjct 721 CGTAGCTCTAATATGCAAGATTTATCTGATACTGTAGACCAATCTCATCTGCAAGGGCAG 780
Query 781 TCAGGTGCGCAAGAACAAAGTGAAGCACAAGTACAATCAGATTTCCAAGAGTCATCAAAA 840
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 TCAGATGCGCAAGAACGAAGTGAAGCACAAGTACAATCAGATTTCCAAGAGTCATCAAAA 840
Query 841 GCTCGTGATTCTATAACTGGTTCAGGTTATATAGAGTATGTCATTAATCAAAGTCCTGTT 900
||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 841 GCTCGCGATTCTATAACTGGTTCAGGTTATATCGAGTATGTCATCAATCAAAGTCCTGTT 900
Query 901 GAT-AAGCCTGAAGTGAAGCTAGTAGAGGGATTCCTGTCTGGGTCCTTATGTCCTGCTGA 959
|| || ||||| |||||||||||||| ||||| ||||||||||||||| ||||||||
Sbjct 901 AATGAA-CCTGACGTGAAGCTAGTAGAAGGATTTCTGTCTGGGTCCTTACAACCTGCTGA 959
Query 960 TAGAATAGGTTCAACTGTTCCCGAAGGCTGCATTGAAGTGGTAGATGATAATATCCTATA 1019
||||||||||||| ||||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct 960 TAGAATAGGTTCAGCTGTTCCTGCAGGCTGCATTGAAGTTGTAGATGATAATATCCTATA 1019
Query 1020 TAGCCCCTCAGAAGACCTACTTGTGCCTTCTGCTTCTAATGTTTGTGATGAGAAGAAAGA 1079
|||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct 1020 TAGCCCCTCAGAAGACCTACATGTGCCTTGTGCTTCTATTGTTTGTGATGAGAAGAAAGA 1079
Query 1080 AACACTTGAATCGATGGTGGAGAAAAGCCGCAAAGATGATGAACCATCAGAGCTACATGA 1139
|||||||||||| ||||||||||||||| || |||||||||||||||||||| |||||||
Sbjct 1080 AACACTTGAATCAATGGTGGAGAAAAGCAGCGAAGATGATGAACCATCAGAGATACATGA 1139
Query 1140 GTCAAAATTTGGCCCAGTAACACCAGACAGGGTAAGGCAAAATCAAAGGGACTTTGATAG 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 GTCAAAATTTGGCCCAGTAACACCAGACAGGGTAAGGCAAAATCAAAGGGACTTTGATAG 1199
Query 1200 GACATATATTTTGTTTGATGAGGTAGATATTGTGGGAGAAAAACAAAGTAAGAGCCAGGC 1259
||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||
Sbjct 1200 GACGTATATTTTGTTTGATGAGGTAGATAGTGTGGGAGAAAAACAAAGTAAGAGTCAGGC 1259
Query 1260 CAACAATATTGATGGAACACTAGGAATTGAGAACGAAGGAGAAGATAAGAGTGAACAAGA 1319
|||| ||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct 1260 CAACTATATTGATGGAACACTAGGCATTGAGAACGAAGGAGAAAATAAGAGTGAACAAGA 1319
Query 1320 GAGTGAAGCAGATGAGTTTGTTGATGCTCGTAATACAATTGAATCAGAATCGGAGAGTGA 1379
||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1320 GAGTGAAGCAGATGAATTTGTGGATGCACGTAATACAATTGAATCAGAATCGGAGAGTGA 1379
Query 1380 TATTGATGGAGTACCAAAACCGAAATTGGAGCATTACTTTGGGGATATTAGTACTTATTG 1439
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1380 TATTGATGGAGTACCAAAACCGAAACTGGAGCATTACTTTGGGGATATTAGTACTTATTG 1439
Query 1440 TTCGGAAGATGCTAACAGTGACAACAATGATGGATCAGAAGATATAACA-TATGAAGAAA 1498
||||||||||||||||||||||||| |||||||||||||||||||| || |||||||| |
Sbjct 1440 TTCGGAAGATGCTAACAGTGACAACGATGATGGATCAGAAGATATA-CAATATGAAGACA 1498
Query 1499 TGGCACATGATCCACGCCATGAAAATTCTGAAGATGAATCTTGTTCAGGTTCTTACCTTC 1558
||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1499 TGGCAAATTATCCACGCCATGAAAATTCTGAAGATGAATCTTGTTCAGGTTCTTATTTTT 1558
Query 1559 CTGAAGACTCAAATGTTTCCA-GTTGCCTATCAGATCCAGTGTGTGAGGAAACTCTGTTT 1617
|||||| |||||||| || | ||||| | ||||||||||||||| || ||||||||| |
Sbjct 1559 TTGAAGATTCAAATGTGTC-ATGTTGCATGTCAGATCCAGTGTGTAAGAAAACTCTGTCT 1617
Query 1618 CATGATGAGAATTCTCAAAAGCCATGGGAATTTTTTACCATG-TGCCCTTCGTTATTGGC 1676
|||||||||||||||||||||||||||||||||||| | | | |||||||||||||||||
Sbjct 1618 CATGATGAGAATTCTCAAAAGCCATGGGAATTTTTTGCTA-GCTGCCCTTCGTTATTGGC 1676
Query 1677 TGAAAAAGCCGTTCCGGATGTAACAATTTTGCGAGAAGAACCTGTCA-TGGCACATCCCT 1735
|||||||||| ||||||||||||||||||||||||||||||||||| || |||||| ||
Sbjct 1677 TGAAAAAGCCTTTCCGGATGTAACAATTTTGCGAGAAGAACCTGTCGCTG-CACATCACT 1735
Query 1736 TGTTTGCAGGAGACTCTGCTAATGAAAAGATATCATCTGAAGAACGTA-TTATCTCATGC 1794
|||| |||||||||| |||||||||||||||||||||||||||| || || || ||| |
Sbjct 1736 TGTTGGCAGGAGACTGGGCTAATGAAAAGATATCATCTGAAGAACCTAGTT-TCCCATAC 1794
Query 1795 CCGTCTCTGAAAGATGCTATTCCTGCTGAAAAGATCTTGCCAGAAGAACATTTGGTCAAC 1854
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1795 CCGTCTCTGAAAGATGCTATTCCTGCTGAAAAGATCTTGCCAGAAGAACATTCGGTCAAC 1854
Query 1855 TATCCATCTCTTG-A-A-GCTATTCCCCATGAAAAGATCTTGCCAGGAGAGTCTATTGCC 1911
||||||||||| | | | |||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1855 TATCCATCTCTCGCAGAAGCTATTCCCCGTGAAAAGATCTCGCCAGGAGAGTCTATTGCC 1914
Query 1912 AAATATCCTTCTTTTGCAGAAATCATACCGC-AAGAAAAGATCTTGTCTGAAAAGTCTTT 1970
||||||| ||||||||||||||| | || | ||||||| |||||||| |||||||||||
Sbjct 1915 GAATATCCATCTTTTGCAGAAATCGT-CCTCCAAGAAAAAATCTTGTCGGAAAAGTCTTT 1973
Query 1971 GGAAGAAGCTGTGCTTGACAATATGACCCCAGCAGGAGAACCTGATGCTGCTCATCCATC 2030
|||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1974 GGAAGAAGCTGTGCCTGACAATATGACCCCAGCAGGAGAACCTGATGCTACTCATCCATC 2033
Query 2031 ATTTCCCAAAGCTGTTCAAGACAAGAAAATCTCACCAGAAGTTCTTGATTCGAAAATATT 2090
||||||| |||||||||||||||||||| | |||||||||||||||||||||||| | ||
Sbjct 2034 ATTTCCCGAAGCTGTTCAAGACAAGAAACTTTCACCAGAAGTTCTTGATTCGAAATTTTT 2093
Query 2091 TTCTGTGCCAAAAGCTGTTTCACAAGAGCCAATCTCCCTTGAAGAATTTGTTAGGATACA 2150
|||||||||| ||||||||||||||||||||||||| |||||||| |||| | ||||| |
Sbjct 2094 TTCTGTGCCAGAAGCTGTTTCACAAGAGCCAATCTCACTTGAAGAGTTTGATGGGATATA 2153
Query 2151 TCCATGTTTGGCTGAAGCTGTTCCTGATGAAAGGTTCTTGATAGAAGAACCTCCCAGCAC 2210
||||||||||||||||||||||| ||||||||||||||||| |||||| ||| ||| |||
Sbjct 2154 TCCATGTTTGGCTGAAGCTGTTCATGATGAAAGGTTCTTGACAGAAGAGCCTTCCACCAC 2213
Query 2211 ATGTTTGTCTTTGACAAAAGCCATGCCTA-CTGAAATATTATTGCCAGAAAAAACTTTGG 2269
|||||||||||||||||||||||| |||| | |||| | |||||||||||||| ||||||
Sbjct 2214 ATGTTTGTCTTTGACAAAAGCCATCCCTATC-GAAAAAGTATTGCCAGAAAAACCTTTGG 2272
Query 2270 AATCGTCTCATTATTTGGAAGAATTGCCTGAAGAAGATATCTTGCAAGAAAAATCTGTTG 2329
|||||||||| ||||||| |||||||||| |||||||||| |||||||||||| ||||||
Sbjct 2273 AATCGTCTCAATATTTGGCAGAATTGCCTAAAGAAGATATATTGCAAGAAAAAACTGTTG 2332
Query 2330 ATTCTACACATCCATCTTGTGCCAAAGCTGCTGCAGAAACAAATCTATCACCAGAAGTTC 2389
||||||||| |||||||||||||||||||| ||||||||||||| |||||| ||||||||
Sbjct 2333 ATTCTACACGTCCATCTTGTGCCAAAGCTGTTGCAGAAACAAATTTATCACAAGAAGTTC 2392
Query 2390 TTGATTCCACAAAATTGTCTGTGGCAGAAGCTGTTCCGCAAGA-ACAAGTCTCACTTGAA 2448
||||| || ||| ||||||||| ||||||||||||||||||| | || |||||||||||
Sbjct 2393 TTGATGCCTTAAACTTGTCTGTGACAGAAGCTGTTCCGCAAGAGAAAA-TCTCACTTGAA 2451
Query 2449 GAATTTGTTGGCATCAATCCGTGTTTGGTAGAAGCGGTTCCTGATGAAAGGCTCTTGCCA 2508
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2452 GAATTTGTTGGCATCAATCCGTGTTTGGTAGAAACGGTTCCTGATGAAAGGCTCTTGCCA 2511
Query 2509 GAAGAACCTGACACCACATATCTGTCTTTGACAAAAGCCGTGGCTATTGAAAAGGTCTTG 2568
|||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||||
Sbjct 2512 GAAGAACCTGTCACCACATATCTGTCTTTAACAAAAGCTGTGGCCATTGAAAAGGTCTTG 2571
Query 2569 TCAGAAGAGCTTTTGGAAACATATCCTTCTTTGGCAGAATTGCCTGAAGAAGAGTTTTTG 2628
||||||||| ||||||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct 2572 TCAGAAGAGATTTTGGAAACATATCATTCTTTGGCAGAATTGCTTGAAGAAGAGATTTCA 2631
Query 2629 CAGGAAGAAACTGATGATGCCACACATACATCTGAAGCTGTTAGTGATGAAGAAATCTCC 2688
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2632 CAGGAAGAAACTGATGATGCCACACATACATCTGAAGCTGTTAGTGATGAAGGAATCTCC 2691
Query 2689 CAAGAAGTTTCTGATTCCACAAATTTGTCTCTTGAAGAA-GCTCTTCCACTAGAGCACAT 2747
| |||||||||||||||||||||||||||||||||| || |||||||||| |||||| ||
Sbjct 2692 CCAGAAGTTTCTGATTCCACAAATTTGTCTCTTGAA-AACGCTCTTCCACAAGAGCAAAT 2750
Query 2748 CTCACATGAAGAATTTGTTGGCATAGATCAGTGTTTGGTAGAAGTGGCTCCTGAGGAAAG 2807
||||| ||||||||||||||||||| |||||||||||| ||||| || |||||| |||||
Sbjct 2751 CTCACTTGAAGAATTTGTTGGCATAAATCAGTGTTTGGCAGAAGCGGTTCCTGATGAAAG 2810
Query 2808 GTTCTTGCCAGAA 2820
|||||||||||||
Sbjct 2811 GTTCTTGCCAGAA 2823
Score = 647 bits (350), Expect = 0.0
Identities = 504/578 (87%), Gaps = 12/578 (2%)
Strand=Plus/Plus
Query 4036 GAAGCAGTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTACTTCCACAACAGAAACT 4095
|||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3859 GAAGCAGTTTTTAAAGAAAAGATCCCAGGCTCAGAAGCTTCTAGTTCCACAACAGAAAC- 3917
Query 4096 GG-TCCACACAACAAAACCTTCCCTGAAGAACCTTTTGCCATGGAAAATTTCTTGAACGA 4154
|| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 3918 GGTTCCACACAACAAAACCTTCCCTGAAGAACCTTTTGCCATGGAAAATTCCTTGAATGA 3977
Query 4155 AGCAGTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTCCT-GTTTCCACAACAGAAACTG 4213
|||||||||||||||||||||| |||||||||||||| || ||| |||| |||||||||
Sbjct 3978 AGCAGTTTTTGATGAAAAGATCTCAGGCTCAGAAGCTTCTAGTT-CCACTACAGAAACTA 4036
Query 4214 GTCTACACAATGAAACCTTCACTGAAGAACCTGTTGCCACAGATATTTCCTTGAACGAAG 4273
|| |||||| |||||||||||||||||||| ||||||| || | |||| |||| ||||
Sbjct 4037 ATCCACACAACAAAACCTTCACTGAAGAACCTTTTGCCACGGAAAATTCCCTGAAAGAAG 4096
Query 4274 CAGTTTTTGGTGAAATTATCCCAGGCTCAGAAGCTCCTGGTTCCGCAACAGAAACTGGTC 4333
||| ||||| ||||| ||||| || ||||||||||||||||| ||||| ||||||||||
Sbjct 4097 CAGATTTTGATGAAAAGATCCCTGGTTCAGAAGCTCCTGGTTCTGCAACCGAAACTGGTC 4156
Query 4334 TACACAACAAAACCTTCCCTGAAAAACCTTTTGCCACG-GATCTTTCTTTAAAAGAAGCA 4392
|||||||||| | |||| |||| ||||| |||||| | ||| |||| || || ||||||
Sbjct 4157 CACACAACAAATCATTCCTTGAAGAACCTGTTGCCA-GAGATATTTCCTTGAACGAAGCA 4215
Query 4393 GTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTAGTTCCACAACAGAAACTAGT-CC 4451
||| |||||||||||||||||||||||||||||||| ||||||||| ||||||| || ||
Sbjct 4216 GTTGTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTTGTTCCACAAGAGAAACT-GTTCC 4274
Query 4452 ACACAACAAAACCTTCCCTAGAGAAACTATTACCACAGATCTGTCCTCGACCGAAGCTGT 4511
||||||| ||||||||||| ||||| || || |||||||||| |||| | | |||||||
Sbjct 4275 ACACAACGAAACCTTCCCTGGAGAACCTGTTGCCACAGATCTTTCCTTGGTCAAAGCTGT 4334
Query 4512 TTTTGATGAAAAGATCACAGGCTCAGGAG-TTCCTAGTTTCACAACAGAAACTGGT-TCA 4569
||||||||||| |||| ||||||||| || ||| ||||| | ||| |||||| ||| | |
Sbjct 4335 TTTTGATGAAAGGATCCCAGGCTCAGAAGATTC-TAGTTCCTCAATAGAAACCGGTCT-A 4392
Query 4570 CACAACAAATGCTTCCCTGAAGAACCTGTTCCCAAGGA 4607
||||||||| |||||||| |||||||||| ||| |||
Sbjct 4393 CACAACAAAACCTTCCCTGGAGAACCTGTTGCCACGGA 4430
Score = 640 bits (346), Expect = 0.0
Identities = 498/572 (87%), Gaps = 8/572 (1%)
Strand=Plus/Plus
Query 3919 GAAGCTGTTTTTGATGAAAATATCTCAGGCTCAGAAGCTCCTGGTTCCACAACAGAAACT 3978
||||| |||||||||||||| |||||||||||||||||| || ||||||| |||||||||
Sbjct 3976 GAAGCAGTTTTTGATGAAAAGATCTCAGGCTCAGAAGCTTCTAGTTCCACTACAGAAACT 4035
Query 3979 GGTCGACAAAACAAAACCTTCCCTGAAAAAACTTTTGCCACGGAAAATTCCTTGAACGAA 4038
|| ||| |||||||||||| ||||| || |||||||||||||||||||| |||| |||
Sbjct 4036 AATCCACACAACAAAACCTTCACTGAAGAACCTTTTGCCACGGAAAATTCCCTGAAAGAA 4095
Query 4039 GCAGTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTACTTCCACAACAGAAACTGGT 4098
|||| |||||||||||||||||| || ||||||||| || ||| |||| |||||||||
Sbjct 4096 GCAGATTTTGATGAAAAGATCCCTGGTTCAGAAGCTCCTGGTTCTGCAACCGAAACTGGT 4155
Query 4099 CCACACAACAAAACCTTCCCTGAAGAACCTTTTGCCATGGA-AAATTT-CTTGAACGAAG 4156
|||||||||||| | |||| |||||||||| |||||| || | |||| |||||||||||
Sbjct 4156 CCACACAACAAATCATTCCTTGAAGAACCTGTTGCCA--GAGATATTTCCTTGAACGAAG 4213
Query 4157 CAGTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTCCT-GTTTCCACAACAGAAACTGGT 4215
||||| ||||||||||||||||||||||||||||| || ||| |||||| |||||||| |
Sbjct 4214 CAGTTGTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTTGTT-CCACAAGAGAAACTGTT 4272
Query 4216 CTACACAATGAAACCTTCACTGAAGAACCTGTTGCCACAGATATTTCCTTGAACGAAGCA 4275
| |||||| ||||||||| ||| ||||||||||||||||||| |||||||| | ||||
Sbjct 4273 CCACACAACGAAACCTTCCCTGGAGAACCTGTTGCCACAGATCTTTCCTTGGTCAAAGCT 4332
Query 4276 GTTTTTGGTGAAATTATCCCAGGCTCAGAAGCTCCTGGTTCCGCAACAGAAACTGGTCTA 4335
||||||| ||||| |||||||||||||||| | || ||||| ||| |||||| ||||||
Sbjct 4333 GTTTTTGATGAAAGGATCCCAGGCTCAGAAGATTCTAGTTCCTCAATAGAAACCGGTCTA 4392
Query 4336 CACAACAAAACCTTCCCTGAAAAACCTTTTGCCACGGATCTTTCTTTAAAAGAAGCAGTT 4395
||||||||||||||||||| | ||||| |||||||||| || || || | ||||| | |
Sbjct 4393 CACAACAAAACCTTCCCTGGAGAACCTGTTGCCACGGAGCTGTCCTTGACCGAAGCTGGT 4452
Query 4396 TTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTAGTTCCACAACAGAAACTAGTCCACAC 4455
||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||
Sbjct 4453 TTTGATGAAAAGATCCCCGGCTCAGAAGCTCCTAGTTCCACAACAGAAACTGGTCCACAC 4512
Query 4456 AACAAAACCTTCCCTAGA-GAAACTATTACCA 4486
||||||||||||||| || ||| || ||||||
Sbjct 4513 AACAAAACCTTCCCT-GAAGAACCTGTTACCA 4543
Score = 459 bits (248), Expect = 1e-127
Identities = 387/455 (85%), Gaps = 6/455 (1%)
Strand=Plus/Plus
Query 3918 AGAAGCTGTTTTTGATGAAAATATCTCAGGCTCAGAAGCTCCTGGTTCCACAACAGAAAC 3977
|||||| | |||||||||||| ||| | || ||||||||||||||||| |||| |||||
Sbjct 4092 AGAAGCAGATTTTGATGAAAAGATCCCTGGTTCAGAAGCTCCTGGTTCTGCAACCGAAAC 4151
Query 3978 TGGTCGACAAAACAAAACCTTCCCTGAAAAAACTTTTGCCACG-GAAAATTCCTTGAACG 4036
||||| ||| |||||| | |||| |||| || || |||||| | || | |||||||||||
Sbjct 4152 TGGTCCACACAACAAATCATTCCTTGAAGAACCTGTTGCCA-GAGATATTTCCTTGAACG 4210
Query 4037 AAGCAGTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTACTTCCACAACAGAAACTG 4096
|||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 4211 AAGCAGTTGTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTTGTTCCACAAGAGAAACTG 4270
Query 4097 GTCCACACAACAAAACCTTCCCTGAAGAACCTTTTGCCATGGAAAATTTC-TTGAACGAA 4155
|||||||||| |||||||||||| ||||||| |||||| || |||| ||| | ||
Sbjct 4271 TTCCACACAACGAAACCTTCCCTGGAGAACCTGTTGCCACAGATC-TTTCCTTGGTCAAA 4329
Query 4156 GCAGTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTCCT-GTTTCCACAACAGAAACTGG 4214
|| ||||||||||||| ||||||||||||||||| | || ||| || ||| |||||| ||
Sbjct 4330 GCTGTTTTTGATGAAAGGATCCCAGGCTCAGAAGATTCTAGTT-CCTCAATAGAAACCGG 4388
Query 4215 TCTACACAATGAAACCTTCACTGAAGAACCTGTTGCCACAGATATTTCCTTGAACGAAGC 4274
||||||||| |||||||| ||| ||||||||||||||| || | ||||||| ||||||
Sbjct 4389 TCTACACAACAAAACCTTCCCTGGAGAACCTGTTGCCACGGAGCTGTCCTTGACCGAAGC 4448
Query 4275 AGTTTTTGGTGAAATTATCCCAGGCTCAGAAGCTCCTGGTTCCGCAACAGAAACTGGTCT 4334
| ||||| ||||| ||||| ||||||||||||||| ||||| |||||||||||||||
Sbjct 4449 TGGTTTTGATGAAAAGATCCCCGGCTCAGAAGCTCCTAGTTCCACAACAGAAACTGGTCC 4508
Query 4335 ACACAACAAAACCTTCCCTGAAAAACCTTTTGCCA 4369
|||||||||||||||||||||| ||||| || |||
Sbjct 4509 ACACAACAAAACCTTCCCTGAAGAACCTGTTACCA 4543
Score = 255 bits (138), Expect = 2e-66
Identities = 200/230 (87%), Gaps = 3/230 (1%)
Strand=Plus/Plus
Query 3920 AAGCTGTTTTTGATGAAAATATCTCAGGCTCAGAAGCTCCTGGTTCCACAACAGAAACTG 3979
|||||||||||||||||| ||| |||||||||||| | || ||||| ||| |||||| |
Sbjct 4328 AAGCTGTTTTTGATGAAAGGATCCCAGGCTCAGAAGATTCTAGTTCCTCAATAGAAACCG 4387
Query 3980 GTCGACAAAACAAAACCTTCCCTGAAAAAACTTTTGCCACGGAAAAT-TCCTTGAACGAA 4038
||| ||| |||||||||||||||| | || || ||||||||| | | ||||||| ||||
Sbjct 4388 GTCTACACAACAAAACCTTCCCTGGAGAACCTGTTGCCACGG-AGCTGTCCTTGACCGAA 4446
Query 4039 GCAGTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTACTTCCACAACAGAAACTGGT 4098
|| | |||||||||||||||||| |||||||||||| ||| |||||||||||||||||||
Sbjct 4447 GCTGGTTTTGATGAAAAGATCCCCGGCTCAGAAGCTCCTAGTTCCACAACAGAAACTGGT 4506
Query 4099 CCACACAACAAAACCTTCCCTGAAGAACCTTTTGCCATGGAAAAT-TTCT 4147
|||||||||||||||||||||||||||||| || ||| |||||| ||||
Sbjct 4507 CCACACAACAAAACCTTCCCTGAAGAACCTGTTACCAACGAAAATATTCT 4556
Score = 224 bits (121), Expect = 6e-57
Identities = 195/230 (85%), Gaps = 8/230 (3%)
Strand=Plus/Plus
Query 4386 AGAAGCAGTTTTTGATGAAAAGATCCCAGGCTCAGAAGCTTCTAGTTCCACAACAGAAAC 4445
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3858 AGAAGCAGTTTTTAAAGAAAAGATCCCAGGCTCAGAAGCTTCTAGTTCCACAACAGAAAC 3917
Query 4446 TAGT-CCACACAACAAAACCTTCCCTAGA-GAAACTATTACCACAGATC-TGTCCTCGAC 4502
|| ||||||||||||||||||||| || ||| || || ||| || | |||| ||
Sbjct 3918 G-GTTCCACACAACAAAACCTTCCCT-GAAGAACCTTTTGCCATGGAAAAT-TCCTTGAA 3974
Query 4503 CGAAGCTGTTTTTGATGAAAAGATCACAGGCTCAGGAG-TTCCTAGTTTCACAACAGAAA 4561
||||| |||||||||||||||||| ||||||||| || ||| ||||| ||| |||||||
Sbjct 3975 TGAAGCAGTTTTTGATGAAAAGATCTCAGGCTCAGAAGCTTC-TAGTTCCACTACAGAAA 4033
Query 4562 CTGGTTCACACAACAAATGCTTCCCTGAAGAACCTGTTCCCAAGGAAAAT 4611
|| | ||||||||||| |||| ||||||||||| || ||| |||||||
Sbjct 4034 CTAATCCACACAACAAAACCTTCACTGAAGAACCTTTTGCCACGGAAAAT 4083
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 233140692198
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5