BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G19130.1
Length=2496
Score E
Sequences producing significant alignments: (Bits) Value
Ahg329623 jgi|Araly1|329623|fgenesh1_pm.C_scaffold_7001850 3221 0.0
Ahg313748 jgi|Araly1|313748|fgenesh1_pm.C_scaffold_1002528 1142 0.0
> Ahg329623 jgi|Araly1|329623|fgenesh1_pm.C_scaffold_7001850
Length=2406
Score = 3221 bits (1744), Expect = 0.0
Identities = 2203/2415 (91%), Gaps = 69/2415 (3%)
Strand=Plus/Plus
Query 1 ATGGAGGTAAGTTTGACGGCGGGAGCAATCGGGAAGATAATGAATGGAGAAGTGACGACT 60
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||
Sbjct 1 ATGGAGGTAAGTTTGACGGCGGGAGCAATCGGGAAGATAATGAGTGGGGAAGTGAAAACT 60
Query 61 GAAGCAGATATGATTCCGGTGTTGCAAGTGACGGATTTGAAGCAGATTATGGCTCAACAA 120
|| ||||||||||| |||||| ||||||||||||| ||||||||| ||| |||| | |||
Sbjct 61 GAGGCAGATATGATGCCGGTGCTGCAAGTGACGGAATTGAAGCAGCTTAAGGCTTATCAA 120
Query 121 GATCCAACAAGAGAGAGGTTTAGGAT-GGTGTTATCTGATGGGACAT-ACTTGCATCAAG 178
|||||||| ||||||||||||||||| ||| ||||| |||||||| | ||||||||||||
Sbjct 121 GATCCAACGAGAGAGAGGTTTAGGATGGGT-TTATCAGATGGGAC-TCACTTGCATCAAG 178
Query 179 GAATGCTAGGAACTGATCTCAACAATCTTGTCAAAGAAGGGACTCTTCAACCCGGTTCTA 238
| ||||| | ||||||||||||| ||||||||||| |||||||||||||| ||||||| |
Sbjct 179 GTATGCTCGCAACTGATCTCAACGATCTTGTCAAACAAGGGACTCTTCAATCCGGTTCCA 238
Query 239 TTGTTAGACTTACTCGTTTCGTCGGTGATGTCATCAAGGGTCGAAGGATTGTTATTGTTC 298
||||| ||||||||| ||||| || | ||||| || || ||||||||||||||||||||
Sbjct 239 TTGTTCGACTTACTCATTTCGGCGTTCATGTCGTCCAGACTCGAAGGATTGTTATTGTTC 298
Query 299 CGCAACTGGAGGTGTTAAAA-CAGATTTCTGATATTATCGGGCATCCTGTTCCAGGAGGA 357
| ||||||||||| ||||| | || ||||||||| ||||||||||||||||||||||||
Sbjct 299 GGGAACTGGAGGTGATAAAATC-GAATTCTGATATAATCGGGCATCCTGTTCCAGGAGGA 357
Query 358 AAGCATAATGATCAACGTGGAGCAGATTCTGGTATTAAGTTTAATACAA------CTGAG 411
|||||||||||||||||||||||||| |||||||||||||| ||||||| ||||
Sbjct 358 AAGCATAATGATCAACGTGGAGCAGAGTCTGGTATTAAGTTAAATACAACTGGTTCTGAT 417
Query 412 CAACAAGGTAGTGGTATCCGTCAAGTAAACAATATCGAGCCAGGGAGAAGTAATGCAGCT 471
||||| ||| |||| |||||||||| |||||||||||| |||||||||||||||||||
Sbjct 418 CAACAGGGTCTTGGTGTCCGTCAAGTTAACAATATCGAGACAGGGAGAAGTAATGCAGCG 477
Query 472 ATTTCACCTC-AG--GTT---------G-G--TGGTACTGGTTCTAGTGTTCCTGCATCA 516
|| ||||||| || ||| | | ||||||| ||||||||||||||||||||
Sbjct 478 ATGTCACCTCAAGTTGTTCAAAGGCCAGTGTTTGGTACTAGTTCTAGTGTTCCTGCATCA 537
Query 517 ACAACACCTTCCACTCGGGCATACAGCAATCCGTCTTCAGGTAATGGAGTCACTAGGCAG 576
||||||||||||||||||| | ||||||| |||||| ||||| ||||||| ||||||||
Sbjct 538 ACAACACCTTCCACTCGGGTAGACAGCAACCCGTCTGCAGGTCATGGAGTTTCTAGGCAG 597
Query 577 GACTATGCTCGTGATCCTCCAACAAGTTATCCTCATCAGCCTCAACCACCACCACCGATG 636
||| ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 598 GACCATGCTCGTGATCCTCCAACCAGTTATCCTCGTCAGCCTCAACCACCACCACCGATG 657
Query 637 TATGCAAACAGGGGACCAGTGGCT-AGGAATGAAGCACCTCCTAAGATAATTCCAGTTAA 695
|||||||||||||||||||||| | ||||| ||||||||||||| |||||||||| ||||
Sbjct 658 TATGCAAACAGGGGACCAGTGG-TAAGGAACGAAGCACCTCCTAGGATAATTCCAATTAA 716
Query 696 TGCTCTTAGTCCATATTCAGGTAGGTGGACCATCAAGGCCAGAGTCACGAATAAAGCAGC 755
||||||||| || || || |||||||||||||||||||||||||||||||||||||||||
Sbjct 717 TGCTCTTAGCCCGTACTCGGGTAGGTGGACCATCAAGGCCAGAGTCACGAATAAAGCAGC 776
Query 756 ACTTAAGCAATACAGTAATCCCCGTGGGGAAGGGAAAGTGTTCAACTTTGATCTTCTTGA 815
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 777 ACTTAAGCAATACAGTAATCCCCGTGGGGAGGGGAAAGTGTTCAACTTTGATCTTCTTGA 836
Query 816 TGCTGATGGCGGAGAAATACGTGTTACTTGTTTTAACGCTGTGGCTGATCAATTCTATGA 875
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 837 TGCTGATGGCGGAGAAATACGTGTTACTTGTTTTAACGCTGTGGCTGATCAATTCTTTGA 896
Query 876 CCAGATTGTTGTTGGTAATCTTTATCTTATCTCGAGGGGAAGTTTGCGGCCTGCACAAAA 935
||||||||||||||||||||||||||| || ||||||||||||||||||||||| || ||
Sbjct 897 CCAGATTGTTGTTGGTAATCTTTATCTGATTTCGAGGGGAAGTTTGCGGCCTGCTCAGAA 956
Query 936 GAACTTTAATCATCTTCGAAATGATTACGAGATCATGCTGGATAATGCATCAACTATAAA 995
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 957 GAACTTTAATCATCTTCCCAATGATTACGAGATCATGCTGGATAATGCATCAACTATAAA 1016
Query 996 ACAATGCTATGAAGAGGATGCTGCAATTCCGCGCCATCAGTTCCATTTCCGTACCATTGG 1055
|||||||||||| ||||||||||||||||||||||| ||||||||||||||||| || ||
Sbjct 1017 ACAATGCTATGAGGAGGATGCTGCAATTCCGCGCCAACAGTTCCATTTCCGTACTATAGG 1076
Query 1056 GGATATTGAGAGCATGGAGAATAACTGCATCGTTGATGTAATTGGTATTGTGTCATCTAT 1115
|||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 1077 TGATATTGAAAGCATGGAGAATAACAGCATCATTGATGTAATTGGTATTGTGTCATCTAT 1136
Query 1116 CAGTCCTACTGTAACAATAACGAGGAAAAACGGAACTGCAACACCGAAAAGATCACTTCA 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 CAGTCCTACTGTAACAATAACGAGGAAAAACGGAACTGCAACACCGAAAAGATCACTTCA 1196
Query 1176 GTTGAAGGATATGTCAGGCCGAAGTGTTGAGGTAACTATGTGGGGTGACTTCTGCAATGC 1235
||||||||||||||| ||||||||||| ||| |||||||||||||| |||||||||||||
Sbjct 1197 GTTGAAGGATATGTCTGGCCGAAGTGTCGAGTTAACTATGTGGGGTAACTTCTGCAATGC 1256
Query 1236 AGAAGGACAAAGGCTGCAAAGTCTTTGTGATTCTGGTGTGTTTCCGGTTCTTGCTGTTAA 1295
|||||||||||||||||||| ||||||||||||||| | |||||||||||||||||||||
Sbjct 1257 AGAAGGACAAAGGCTGCAAAATCTTTGTGATTCTGGGGAGTTTCCGGTTCTTGCTGTTAA 1316
Query 1296 GGCGGGCAGGATTAGTGAATTTAATGGAAAGACAGTGAGCACCATTGGATCAAGTCAGCT 1355
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1317 GGCGGGCAGGATCAGTGAATTTAACGGAAAGACAGTGAGCACCATTGGATCAAGTCAACT 1376
Query 1356 GTTCATTGACCCAGATTTTGTTGAAGCTGAGAAACTGAAGAACTGGTTTGAGAGAGAAGG 1415
||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||
Sbjct 1377 GTTCATTGACCCAGATTTTGTTGAAGCCCACAAACTGAAGGACTGGTTTGAGAGAGAAGG 1436
Query 1416 AAAGAGTGTCCCTTGTATCTCCTTATCTCGGGAGTTTTCCGGCAGTGGCAAAGTAGATGT 1475
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1437 AAAGAGTGTCCCTTGTATCTCCTTATCTCGGGAGTTTTCCGGCAGTGGCAGAGTAGATGT 1496
Query 1476 TCGTAAGACAATATCTCAAATTAAAGATGAGAAACTAGGAACCTCCGAAAAACCAGACTG 1535
|||||| ||||| |||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1497 TCGTAAAACAATTTCTCAAATTAAAGATGAGAAACTAGGGACCTCAGAAAAACCAGACTG 1556
Query 1536 GATCACAGTCAGTGCCACAATTTTATACTTGAAGTTTGATAACTTCTGCTACACAGCTTG 1595
||| |||||||||||||||||| ||||| ||||| |||| ||||||||||||||||||||
Sbjct 1557 GATTACAGTCAGTGCCACAATTATATACATGAAGGTTGAAAACTTCTGCTACACAGCTTG 1616
Query 1596 TCCTATCATGAACGGTGATCGTCCATGCAGCAAAAAGGTAACAGACAATGGAGATGGGAC 1655
|||||||||||| ||||||||||| ||||||||||| ||||| |||||||||||||| ||
Sbjct 1617 TCCTATCATGAATGGTGATCGTCCGTGCAGCAAAAAAGTAACGGACAATGGAGATGGCAC 1676
Query 1656 ATGGCGGTGCGAAAAGTGTGATAAAAGCGTTGATGAATGTGACTACAGGTATATACTGCA 1715
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1677 ATGGCGGTGCGAAAAGTGTGATAAAAGCGTCGATGAATGTGACTACAGGTATATACTGCA 1736
Query 1716 GCTTCAGATACAGGACCATACAGATCTTACTTGCGTCACAGCATTCCAGGAGGCTGGTGA 1775
||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1737 GCTCCAGATACAGGACCATACGGATCTTACTTGGGTCACAGCATTCCAGGAGGCTGGTGA 1796
Query 1776 AGAGATAATGGGCATATCTGCTAAAGATTTGTATTATGTGAAGAATGAACACAAGGATGA 1835
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 1797 AGAGATAATGGGCATATCTGCTAAAGATTTGTATTATGTGAAGTATGAACACAATGATGA 1856
Query 1836 GGAAAAATTCGAAGATATCATCCGTAAGGTTGCTTTTACCAAGTACAACTTCAAGCTGAA 1895
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1857 GGAAAAATTCGAAGATATCATCCGTAAGGTTGCTTTTACCAAGTACATCTTCAAGCTGAA 1916
Query 1896 GGTAAAAGAAGAAACATTCAGCGACGAACAGCGTGTGAAAGCAACAGTTGTGAAAGTGGA 1955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1917 GGTAAAAGAAGAAACATTCAGCGACGAACAGCGTGTGAAAGCAACAGTTGTGAAAGTGGA 1976
Query 1956 CAAGCTAAACTATTCAGCAGATACCAGGACTATGTTAGGTGCTATGGATAAACTCAGGAC 2015
|||||||||||||||| |||||||||||||||| |||| ||| |||||||||||||||||
Sbjct 1977 CAAGCTAAACTATTCATCAGATACCAGGACTATTTTAGATGCCATGGATAAACTCAGGAC 2036
Query 2016 CAGAGATGCAAATTCTCTTCCCATTAAC-----C-CAGAAGGATC-CGATTACAATGCTG 2068
||||||||| ||||||| |||||||| | |||||||||| | ||||||| ||||
Sbjct 2037 TGGAGATGCAAGTTCTCTTTCCATTAACATTAACGCAGAAGGATCTC-ATTACAACGCTG 2095
Query 2069 ATGTGGTTAATACTGGTATAGGAAGCTCAGGAA-C-CAG-A----GA--TCCCTCATCGG 2119
||| ||||| |||||||||||||||||||||| | ||| | || ||||||||| |
Sbjct 2096 ATGCAGTTAACACTGGTATAGGAAGCTCAGGAAGCTCAGGAACCAGAGATCCCTCATCAG 2155
Query 2120 TCCAAAGAAGGGATTTCGGTTTACATGCGCATCAATCGGGTCAATCTGGGAATCACTATA 2179
||||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||
Sbjct 2156 TCCAAAGAAGGGATTTCAGTTTACATGCTCATCAATCAGGTCAATCTGGGAATCACTATA 2215
Query 2180 GT-G-G--T---GG--T---GGTG------CTACTACTAGCTGCAATGTCTGTGGAAACA 2221
|| | | | || | |||| ||||||||||||||||||||||||||||||
Sbjct 2216 GTAGTGGCTCTAGGCCTCAAGGTGGTGATGCTACTACTAGCTGCAATGTCTGTGGAAACA 2275
Query 2222 GTGGTCATGTTTCTGCAAAGTGTCCAGGCGCTACTAAGCCGCAAGA-GCAAGGGCAGTAC 2280
||||||||||||||||||| |||||| | ||||| | | | | | |||||||||||||
Sbjct 2276 GTGGTCATGTTTCTGCAAACTGTCCAAGTGCTACGA--CTG-A-GCCGCAAGGGCAGTAC 2331
Query 2281 ATGGGTGGCTCTTACAGAGGCACGACGGGGAGTTATGGAGGAGGACTACCGAGACAACAT 2340
|||||||||||||||||||||| | |||||||||||||||||||| |||| || ||||||
Sbjct 2332 ATGGGTGGCTCTTACAGAGGCATGTCGGGGAGTTATGGAGGAGGAATACCTAGGCAACAT 2391
Query 2341 GTTGGAAGCTACTGA 2355
|||||||||||||||
Sbjct 2392 GTTGGAAGCTACTGA 2406
> Ahg313748 jgi|Araly1|313748|fgenesh1_pm.C_scaffold_1002528
Length=2469
Score = 1142 bits (618), Expect = 0.0
Identities = 1285/1600 (80%), Gaps = 73/1600 (5%)
Strand=Plus/Plus
Query 627 ACCACCGATGTATGCAAACAGGGGACCAGTGGCTAGGAATGAAGCACCTCCTAAGATAAT 686
|||||||||||||| || |||||||| ||||||||||||||||| ||||| | ||||||
Sbjct 735 ACCACCGATGTATGTTAATAGGGGACCTGTGGCTAGGAATGAAGCTCCTCCGAGGATAAT 794
Query 687 TCCAG-TTAATGCTCTTAGTCCATATTCA-GGTAGGTGGACCATCAAGGCCAGAGTCACG 744
||| | || |||||||| ||| || || ||| ||||||||||||||| ||| ||| ||
Sbjct 795 TCC-GATTGCTGCTCTTAATCCTTA-CCAGGGTCGGTGGACCATCAAGGTCAGGGTCTCG 852
Query 745 AATAAAGCAGCACTTAAG-CAATACAGTAATCCCCGTGGGGAAGGGAAAGTGTTCAACTT 803
| ||| |||| || | || | | | |||||| ||||||||||||||| |||||| ||
Sbjct 853 AGTAAGGCAGAAC-TGAGACGGTTTAATAATCCGCGTGGGGAAGGGAAATTGTTCAGTTT 911
Query 804 TGATCTTCTTGATGCTGATGGCGGAGAAATACGTGTTACTTGTTTTAACGCTGTGGCTGA 863
|||||| |||||||||||||| ||||||||||| || ||||||||||| | || || |||
Sbjct 912 TGATCTCCTTGATGCTGATGGTGGAGAAATACGGGTGACTTGTTTTAATGATGCGGTTGA 971
Query 864 TCAATTCTATGACCAGATTGTTGTTGGTAATCTTTATCTTATCTCGAGGGGAAGTTTGCG 923
|||||||| |||||||||||| ||||||||| ||||||| || || ||||||| ||||
Sbjct 972 TCAATTCTTTGACCAGATTGTAGTTGGTAATGTTTATCTGATATCAAGGGGAAATTTGAA 1031
Query 924 GCCTGCACAAAAGAACTTTAATCATCTTCGAAATGATTACGAGAT-CATGCTGGATAATG 982
|||||| || ||||||| ||||||||||| |||||||| || || ||| ||||| ||
Sbjct 1032 GCCTGCTCAGAAGAACTATAATCATCTTCCCAATGATTATGAAATACAT-TTGGATTCTG 1090
Query 983 CATCAACTATAAAACAATGCTATGAAGAGGATGCTGCAATTCCGCGCCATCAGTTCCATT 1042
||||||| || ||| ||| ||| || |||| | | ||||| ||| ||||||||||||
Sbjct 1091 CATCAACGAT---ACAGCGCTGTGAGGATGATGGTACCATTCCACGCAATCAGTTCCATT 1147
Query 1043 TCCGTACCATTGGGGATATTGAGAGCATGGAGAATAACTGCATCG-TTGATGTAATTGGT 1101
| |||| ||| | |||||||| | |||||||| ||| |||| | |||| ||||||||
Sbjct 1148 TTCGTAACATAAGTGATATTGAAAACATGGAGAGCAACAGCAT-GACTGATCTAATTGGT 1206
Query 1102 ATTGTGTCATCTATCAGT-CCTACTGTAACAATAACGAGGAAAAACGGAACTGCA-ACAC 1159
||||| || || ||| || || || ||| |||| | | ||||||||||||||| | |
Sbjct 1207 ATTGTTTCGTCCATCGGTACC-ACAGTACCAATTATGCGGAAAAACGGAACTG-AGGTAG 1264
Query 1160 CGAAAAGATCACTTCAGTTGAAGGATATGTCAGGCCGAAGTGTTGAGGTAACTATGTGGG 1219
||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 1265 ATAAAAGGGCACTTCAGTTGAAGGATATGTCAGGCCGTAGTGTTGAGGTAACCATGTGGG 1324
Query 1220 GTGACTTCTGCAATGCAGAAGGACA--AAGGCTGCAAAGTCTTTGTGATTCTGGTGTGTT 1277
|| | ||||||| ||||||||||| || |||||| ||||||||||||||| || ||
Sbjct 1325 GTAATTTCTGCAGCGCAGAAGGACAGCAA--TTGCAAAATCTTTGTGATTCTGGGGTATT 1382
Query 1278 TCCGGTTCTTGCTGTT-AAGGCGGGCAGGATTAGTGAATTTAATGGAAAGAC-AGTGAGC 1335
|||||||||||| || || ||||||||||| ||||||| || || ||| | |||||||
Sbjct 1383 CCCGGTTCTTGCT-TTGAAAGCGGGCAGGATCGGTGAATTCAACGGGAAG-CAAGTGAGC 1440
Query 1336 ACCATTGGATCAAGTCAGCTGTTCATTGACCCAGATTTTGTTGAAG-CTGAGAAACTGAA 1394
||||||||||||||||| | ||| | || |||||||| ||||| | ||| || | ||
Sbjct 1441 ACCATTGGATCAAGTCAATTCTTCGTAGAGCCAGATTTCCCTGAAGCCAGAG-AA-TTAA 1498
Query 1395 -G-AACTGGTTTGAGAGAGAAGGAAAGAGTGTC-CCTTGTATCTCCTTATCTCGGGAGTT 1451
| || |||| |||||||||||||| || || | | || || |||| ||||| | |||||
Sbjct 1499 GGCAA-TGGTATGAGAGAGAAGGAAGGAATG-CTCATTTTACCTCCATATCTAGAGAGTT 1556
Query 1452 TTCCGGCAG-TGGCAAAGTAGATGTTCGTAAGACAA-TATCTCAAATTAAAGATGAGAAA 1509
|||||| | ||||| | ||| ||||| ||| || || |||| || || || |||||
Sbjct 1557 TTCCGG-TGTTGGCAGACAAGAGGTTCGCAAGGTAATTA-CTCAGATCAAGGACGAGAAG 1614
Query 1510 CTAGGAACCTCCGAAAAACCAGACTGGATCACAGTCAGTGCCACAATTTTATACTTGAAG 1569
||||| ||||| || || || ||||||||||||||| ||||||| |||| || | |||||
Sbjct 1615 CTAGGGACCTCAGAGAAGCCGGACTGGATCACAGTCTGTGCCACCATTTCATTCATGAAG 1674
Query 1570 TTTGATAACTTCTGCTACACAGCTTGTCCTATCATGAACGGTGATCGTCCATGCAGCAAA 1629
|||| || |||||||| || ||||||||||||||||| || ||||||||||||||||||
Sbjct 1675 GTTGAAAATTTCTGCTATACGGCTTGTCCTATCATGAATGGAGATCGTCCATGCAGCAAA 1734
Query 1630 AAGGTAACAGACAATGGAGATGGGACATGGCGGTGCGAAAAGTGTGATAAAAGCGTTGAT 1689
|| || ||| | || ||||||||||||||||| || || |||||||| ||| |||| |||
Sbjct 1735 AAAGTCACAAATAACGGAGATGGGACATGGCGTTGTGAGAAGTGTGACAAATGCGTGGAT 1794
Query 1690 GAATGTGACTACAGGTATATACTGCAGCTTCAGATACAGGACCATACAGATCTTACTTGC 1749
||||||||||||||||||||| ||||| | ||| ||||||||||||||| || || ||
Sbjct 1795 GAATGTGACTACAGGTATATATTGCAGATCCAGTTACAGGACCATACAGGCCTAACCTGG 1854
Query 1750 GTCACAGCATTCCAGGAGGCTGGTGAAGAGATAATGGGCATATCTGCTAAAGATTTGTAT 1809
| ||||||||||||||| |||||||||||||||||||| || ||||| ||||||||||||
Sbjct 1855 GCCACAGCATTCCAGGAAGCTGGTGAAGAGATAATGGGAATGTCTGCAAAAGATTTGTAT 1914
Query 1810 TATGTGAAGAATGAACA-CAAGGATGAGGAAAAATTCGAAGATATCATCCGTAAG-GTTG 1867
||||||||| ||||| | || ||||||||| ||||| |||||||||||||| | | || |
Sbjct 1915 TATGTGAAGTATGAAAATCA-GGATGAGGAGAAATTTGAAGATATCATCCGCA-GTGTCG 1972
Query 1868 CTTTTACCAAGTACAACTTCAAGCTGAAGGTAAAAGAAGAAACAT-TCAGCGACGAACAG 1926
||||||||||||||| || ||||||||| | ||||||||||| | | |||||||| ||
Sbjct 1973 CTTTTACCAAGTACATTTTTAAGCTGAAGATTAAAGAAGAAACTTAT-AGCGACGAGCAA 2031
Query 1927 CGTGTGAAAGCAACAGTTGTGAAAG-TGGACAAGCTAAACTAT-TCAGCAGATACCAGGA 1984
|| || ||||||||||||||||||| || | ||||| |||||| | || ||||||||
Sbjct 2032 CGGGTTAAAGCAACAGTTGTGAAAGCTGAA-AAGCTGAACTATGTTT-CAAATACCAGGT 2089
Query 1985 -CTATGTTAG-GTGCTATGGATAAACTCA-GGACCAG-AGATGCAAATTCTCTTCCCATT 2040
| ||| ||| | || ||||||||||||| || || ||||||||||||||| || ||
Sbjct 2090 GC-ATGCTAGAG-GCAATGGATAAACTCAAGGT--AGGAGATGCAAATTCTCTGCCTATA 2145
Query 2041 AAC-C-CAGAAGGATCCGATTACAA-TGCTGATGTGGTTAATACTGGTATAGGAAGCTCA 2097
|| | |||| | ||| | |||| | |||||| |||||| | ||||| |||| ||||
Sbjct 2146 AAGACACAGA-GT-TCCAACTACAGGT-CTGATGCAGTTAATTCCGGTATTGGAACCTCA 2202
Query 2098 GGAACCAGAGATCCCT-CATC-G-G--TCCAAAGAAGGGATTTCGGTTTACATGC-GCAT 2151
||||| ||||| | || | || | | | || |||| || ||||| ||| ||| |||
Sbjct 2203 GGAACTAGAGA-CACTGCGTCAGTGGATGCAC-GAAGAGAATTCGGAGTACCTGCAGCAA 2260
Query 2152 -C-AA-TCGGGTCAATCTGGGAATCACTATAGTGGTGGTG 2188
| || | |||||||| ||| ||||| || ||| ||||||
Sbjct 2261 ACCAAGT-GGGTCAATATGGAAATCAGTACAGTAGTGGTG 2299
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94082905150
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5