BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G19450.1
Length=1921
Score E
Sequences producing significant alignments: (Bits) Value
Ahg492916 jgi|Araly1|492916|fgenesh2_kg.7__2349__AT4G19450.1 2907 0.0
Ahg948476 jgi|Araly1|948476|scaffold_800363.1 758 0.0
Ahg915596 jgi|Araly1|915596|Al_scaffold_0008_347 549 3e-155
> Ahg492916 jgi|Araly1|492916|fgenesh2_kg.7__2349__AT4G19450.1
Length=1910
Score = 2907 bits (1574), Expect = 0.0
Identities = 1810/1923 (94%), Gaps = 19/1923 (1%)
Strand=Plus/Plus
Query 5 AAAAAACCAAACCCACAAAGtctctctctcttgctctctcGGTGATTCGATTTTCAGAAC 64
|||||| |||||||||||| |||||||| | ||||||||||||||||||||||
Sbjct 1 AAAAAAAAAAACCCACAAAG--TCTCTCTC--G----CTCGGTGATTCGATTTTCAGAAT 52
Query 65 CGAAACTCCGGCGAAAAGATTATGGCGGGACAGTCACGAAAATGGATGATACTGGTGGCG 124
| ||| |||||||||||||||||||||| || ||||||||||||||||| |||||||||
Sbjct 53 C--AACGCCGGCGAAAAGATTATGGCGGGGCAATCACGAAAATGGATGATTCTGGTGGCG 110
Query 125 ACGATATGGATTCAAGCTTTCACCGGGACGAATTTCGATTTCTCAGCTTACTCGTCAGAT 184
|||||||||||||||||||| ||||| || ||||||||||||||||||||||| ||||||
Sbjct 111 ACGATATGGATTCAAGCTTTTACCGGAACAAATTTCGATTTCTCAGCTTACTCATCAGAT 170
Query 185 TTGAAATCGGTTCTAGGGATTTCACAGGTGCAGCTAAACTACCTCGCCGTGGCTTCGGAT 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 171 TTGAAATCGGTTCTAGGGATTTCACAGGTGCAGCTAAACTACCTCGCCGTGGCTTCAGAT 230
Query 245 CTCGGAAAAGTATTCGGATGGTCGTCGGGACTAGCGCTTATGTATTTCCCGCTTTGGACG 304
||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 231 CTCGGAAAAGTTTTCGGATGGTCGTCGGGGCTAGCACTTATGTATTTCCCGCTTTGGACG 290
Query 305 GTGCTTTTCGCGGCGGCGTTTATGGGATTCGTCGGTTATGGAGTTCAGTGGCTTGTCATC 364
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 291 GTGCTTTTCGCGGCGGCGTTTATGGGATTCGTCGGTTATGGAGTTCAGTGGCTCGTCATC 350
Query 365 ACTCATTTCATCTCTTTGCCTTATATCATGGTGTTTCTCTGTTGCTTACTTGCTGGTTTA 424
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct 351 ACTCATTTCATCTCTTTGCCTTATATTATGGTGTTTCTCTGTTGCTTACTTGCTGGTCTA 410
Query 425 AGTATCTGTTGGTTCAACACTGTCTGCTTTGTGCTCTGCATTAGTAACTTCCCTGCAAAC 484
||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 411 AGTATATGTTGGTTCAACACAGTCTGCTTTGTTCTCTGCATTAGTAACTTCCCTGCAAAC 470
Query 485 AGATCACTTGCTCTTTCCCTCACAGTGAGTTTCAATGGTGTAAGCGCTGCTTTATATACT 544
||||||||||||||||||||||| ||||| |||||||| ||||||||||| |||||||||
Sbjct 471 AGATCACTTGCTCTTTCCCTCACCGTGAGCTTCAATGGCGTAAGCGCTGCGTTATATACT 530
Query 545 CTTGCTTACAACGCAATCAATCCAACTTCTCCAGAGCTATATCTTCTTTTGAACGCTCTT 604
|| ||||| ||||||||||||||||| |||||||||||||| |||||||| || ||||||
Sbjct 531 CTCGCTTATAACGCAATCAATCCAACCTCTCCAGAGCTATACCTTCTTTTAAATGCTCTT 590
Query 605 ATACCGCTCATTGTCTCTTTCACTGCTATCATCCCGATTCTTCGTCAACCGCCTTTTGAG 664
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 591 ATACCGCTCATTGTCTCTTTCACTGCAATCATCCCGATTCTTCGCCAACCGCCTTTTGAG 650
Query 665 CCTCTTCCACCAGATGGAGTTCGTCGTGACTCTCTCATGTTTCTATTGCTCAACATACTC 724
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 651 CCTCTTCCACCAGATGGAGTTCGTCGTGACTCTCTCATGTTTCTATTGCTCAACATACTC 710
Query 725 GCTGCTTTAAACGGTGTTTATCTCCTTCTCTTTGGATCAAACTCCTCTGATTTAACCTCT 784
||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||||||||
Sbjct 711 GCTGCTTTAAACGGTGTTTATCTCCTTCTATTTGGGTCAAACTCAACTGATCTAACCTCT 770
Query 785 GCTCGTCTACTCTTTGGTGGAGCAATCCTCCTCTTGGTATTCCCTTTATGTATTCCCGGT 844
||||| || ||||||||||| || ||| |||| ||| | ||||||||||||||||| |||
Sbjct 771 GCTCGGCTCCTCTTTGGTGGTGCTATCGTCCTTTTGATCTTCCCTTTATGTATTCCTGGT 830
Query 845 TTAGTCATCGCCCGGAATTGGTATAACCGCACAATCCACACTAGTTTCCGTCTAGAAGGT 904
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 831 CTAGTCATCGCCCGGAATTGGTATAACCGCACAATCCACACCAGTTTCCGTCTAGAAGGT 890
Query 905 TCTGGTTTCATTCTTGTTGATCCTGATGAGCTTGAGTTGCATAAAGGGATGCTTGCACAT 964
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 891 TCTGGTTTCATTCTTGTTGATCCTGATGACCTTGAGTTGCATAAAGGGATGCTTGCACAT 950
Query 965 GAAGCAAACCGTGAAGGTTACCAATTGCTGAGTGACGATGTGGTGCAAAACCCGGTTAAG 1024
|||||||| |||||||| ||||||||||||| ||| ||||||||||||||||||||||||
Sbjct 951 GAAGCAAATCGTGAAGGCTACCAATTGCTGAATGATGATGTGGTGCAAAACCCGGTTAAG 1010
Query 1025 TCCGTAGCTGTTGAGGAAGAGGATAGTGATGAGTCATGTTGCAAGAAACTTATCACAAGA 1084
||||||||||||||||||| |||| ||||||||| ||||||||||| ||||| ||||||
Sbjct 1011 ACCGTAGCTGTTGAGGAAGACGATACTGATGAGTCTTGTTGCAAGAAGCTTATTACAAGA 1070
Query 1085 GATCAGCTTGAAGGTTTGGGGATTGAACATTCTTTGTCGCTGCTCTTAACCAGATCAGAT 1144
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 1071 GATCAGCTTGAAGGTTTGGGGATTGAACATTCTTTGTCGCTGCTCTTAGGCAGATCTGAT 1130
Query 1145 TTTTGGTTATACTATATCACGTACTTCTGCGGTGGAACCATTGGACTTGTGTACAGCAAC 1204
|| ||||||||||||||| | || ||||||||||||||||||||||||||||||||||||
Sbjct 1131 TTCTGGTTATACTATATCGCTTATTTCTGCGGTGGAACCATTGGACTTGTGTACAGCAAC 1190
Query 1205 AACCTTGGACAGATTGCTCAATCTTTAGGACAAAGCTCAAATACCACAACTCTTGTCACA 1264
||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1191 AACCTCGGACAGATTGCTCAGTCTTTAGGACAAAGCTCAAATACCACAACTCTTGTCACA 1250
Query 1265 CTTTATTC-TGCTTTCTCATTCTTTGGAAGATTGCTTTCTGCAACACCAGATTATATCCG 1323
|||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1251 CTTTATTCCT-CTTTCTCATTCTTTGGAAGATTGCTTTCTGCAACACCTGATTATATCCG 1309
Query 1324 AGCGAAGGTTTATTTTGCCAGAACCGGGTGGTTAGCAATCGCGCTATTACCAACCCCCTT 1383
|||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || ||
Sbjct 1310 AGCGAAGGTTTATTTTGCGAGAACAGGGTGGTTAGCAATCGCGCTATTACCAACGCCATT 1369
Query 1384 CGCACTTTTCTTGCTTGCATCATCAGGAACTGCATCAGCATTACAAGCTGGAACAGCGCT 1443
||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct 1370 CGCGCTTTTCTTGCTTGCATCATCAGGAAATGCATCAGCATTACAAGCAGGAACAGCGCT 1429
Query 1444 GATGGGTTTAAGCTCCGGGTTTATCTTTGCAGCAGCGGTTTCCATCACATCAGAGCTTTT 1503
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1430 GATGGGTTTAAGCTCCGGGTTTATATTCGCAGCAGCGGTTTCCATCACATCAGAGCTTTT 1489
Query 1504 TGGACCAAACAGTGTTGGAGTTAACCACAATATCTTAATCACAAACATACCGATAGGATC 1563
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1490 TGGACCAAACAGTGTTGGAGTTAACCACAATATCTTGATCACAAACATACCAATAGGATC 1549
Query 1564 ATTGATCTATGGATTCTTGGCTGCATTGGTCTATGACTCACATGGTTTCACCGGGACCAA 1623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1550 ATTGATCTATGGATTCTTGGCTGCATTGGTCTATGACTCACATGGTTTCACCGGGACCAA 1609
Query 1624 ATCAATGACCTCGGAGTCGGTGGTGTGTATGGGACGAGATTGTTATTACTTGACCTTTGT 1683
||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1610 ATCGATGACGGCGGAGTCGGTGGTGTGTATGGGACGAGATTGTTATTACTTGACCTTTGT 1669
Query 1684 GTGGTGGGGTTGCTTGTCTCTTCTTGGGCTAGGTTCGAGTCTTGTGTTGTTTATTAGAAC 1743
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1670 GTGGTGGGGTTGCTTGTCTCTACTTGGGCTAGGTTCGAGTCTTGTGTTGTTTATTAGAAC 1729
Query 1744 TAGACGAGCTTATCAACGGTTTGAACAAGCTCGTATAAGTTCGAACATCAACGACTCTTA 1803
|||||||||||||||||||||||| ||||||| |||||||| ||||||| |||||||||
Sbjct 1730 GAGACGAGCTTATCAACGGTTTGAAGAAGCTCGCATAAGTTCAAACATCATCGACTCTTA 1789
Query 1804 ----GAAATTTGCATCAACCCCAACGGTTTGTGTGTATATGTAGGATCTAAATTATAACA 1859
||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1790 ATTAGAAATTTGCCTCAACCCCAACGGTTTGTGT--ATATGTAGGATCTAAATTATAACA 1847
Query 1860 GACGGATTAATGGTATTTTAGTGGATTTTGGCTGAGGTTGATTTT-TTGGTTTGGATTTT 1918
||||||||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||
Sbjct 1848 GACGGATTAATGGAATTTTAGTGGATTTTGGCTGAGGTTGTTTTTGTTGTTTTGGATTTT 1907
Query 1919 GGT 1921
|||
Sbjct 1908 GGT 1910
> Ahg948476 jgi|Araly1|948476|scaffold_800363.1
Length=1138
Score = 758 bits (410), Expect = 0.0
Identities = 921/1160 (79%), Gaps = 66/1160 (6%)
Strand=Plus/Plus
Query 681 GAGTTCGTCGTGACTCTCTCATGTTTCTATTGCTCAACATACTCGCTGCT-TTAAACGGT 739
||||||| || || |||||||||||||| ||||| |||||| | || | | || || |||
Sbjct 1 GAGTTCGACGAGATTCTCTCATGTTTCTCTTGCTTAACATATTAGC-GGTCTTGAATGGT 59
Query 740 GTTTATCTCCTTCTCTTTGGATCAAACTCCTCTGATTTAACCTCTGCTCGTCTACTCTTT 799
|||||||| ||||||||| | ||||| | |||||| |||| || |||||||| ||||||
Sbjct 60 GTTTATCTGCTTCTCTTTCGTTCAAAGACTTCTGATGTAACTTCAGCTCGTCTTCTCTTT 119
Query 800 GGTGGAGCAATCCTCCTCTTGGTATTC--CCTTTATGTATTCCCGGTTTAGTC-ATCGCC 856
|||||| || | || ||||| | |||| ||| |||| |||| ||| ||||| || ||
Sbjct 120 GGTGGATCATTACTTCTCTT-G-ATTCTTCCTCTATGCCTTCCTGGTCTAGTCTAT-GCT 176
Query 857 CGGAATTGGTATAACCGCAC-A-ATCCACACTAGTTTCCGTCTAGAAGGTTCTGGTTTCA 914
|| ||||||||| | ||| | || ||| | ||||| ||||||||||||||||||||||
Sbjct 177 CGTAATTGGTAT--CTACACAATATTCACTCCAGTTTTCGTCTAGAAGGTTCTGGTTTCA 234
Query 915 TTCTTGTTGATCCTGATGAGCTTGAGTTGCATAAAGGGATGCTTG-CACATGAAGCAAAC 973
||||||||||| ||||||||||||| |||||||||| ||| | | ||| |||||| | |
Sbjct 235 TTCTTGTTGATGTTGATGAGCTTGAGATGCATAAAGGAATGGT-GACACGTGAAGCCAGC 293
Query 974 CGTGAAGGTTACCAATTGCTGAGTGACGATGTGGTGCAAAACCCGGTTAAGTCCGTAGCT 1033
| |||||| ||||| ||||| | || ||||| |||| | | | | || | | | ||
Sbjct 294 CTTGAAGGCTACCAGTTGCTAAACGATGATGTAGTGCGAG-CT-G-TCAA-TAC-TC-CT 347
Query 1034 GTTGAGGAAGAGGAT-AGTGA---TGA-GTC--ATGTTG---CAAGAAACTTATCACAAG 1083
| | || ||||| | | ||| ||| | | |||||| || || ||||| |||||
Sbjct 348 GATCAG-AAGAGTTTCATTGAAGATGACGACGGATGTTGTTGCACTAAGCTTATTACAAG 406
Query 1084 AGATCAGCTTGA-AGGTTTGGGGATTGAACATTCTTTGTCGCTGCTCTTAACCAGATCAG 1142
| ||||||||| | | |||| || |||||| |||| || | |||||| ||||||||
Sbjct 407 AAATCAGCTTGGGATGCTTGGAGAA-GAACATCCTTTATCTTTACTCTTATGCAGATCAG 465
Query 1143 ATTTTTGG-TTATACTATATCA-CGTACTTCTGCGGTGGAACCATTGGACTTGTGTACAG 1200
|||| ||| || |||||||| | | ||||| ||||| || || ||||| || || || ||
Sbjct 466 ATTTCTGGCTT-TACTATAT-AGCCTACTTTTGCGGCGGCACGATTGGGCTGGTTTATAG 523
Query 1201 CAACAACCTTGGACAGATTGCTCAATCTTTAGGACAAAGCTCAAATACCACAACTCTTGT 1260
||||||||| ||||||||||| ||||||||||||||||||||| | || |||||||||||
Sbjct 524 CAACAACCTGGGACAGATTGCACAATCTTTAGGACAAAGCTCAGAGACAACAACTCTTGT 583
Query 1261 CACACTTTATTC-TGCTTTCTCATTCTTTGGAAGATTGCTTTCTGCAACACCAGATTATA 1319
|| |||||||| | |||||||||||||||| |||| ||||| ||||||||||| ||||
Sbjct 584 AACGCTTTATTCGT-CTTTCTCATTCTTTGGTCGATTACTTTCAGCAACACCAGACTATA 642
Query 1320 TCCGAGCGAAGGTTTATTTTGCCAGAACCGGGTGGTTAGCAATCGCGCTATTACCAACCC 1379
|| ||||||||||||||||||| ||||| |||||| |||| | || || |||||||||
Sbjct 643 TCAGAGCGAAGGTTTATTTTGCTAGAACAGGGTGGCTAGCCGTTGCTCTTTTACCAACCA 702
Query 1380 CC-TTCGCACTTTTCTTGCTTG-CATCATCAGGAA-CT-GCATCAGCATTACAAGCTGGA 1435
| || || ||||||||| ||| |||||||||||| || | |||| |||||||| |||
Sbjct 703 CAATT-GCTCTTTTCTTG-TTGGCATCATCAGGAAGCTTGG--CAGCGTTACAAGCAGGA 758
Query 1436 ACAGCGCTGATGGGTTTAAGCTCCGGGTTT-ATCTTTGCAGCAGCGGTTTCCATCACATC 1494
||||| || || ||| ||||||| |||||| || |||||||||||||||||||| |||||
Sbjct 759 ACAGCTCTAATCGGTCTAAGCTC-GGGTTTCATATTTGCAGCAGCGGTTTCCATAACATC 817
Query 1495 AGAGCTTTTTGGACCAAACAGTGTTGGAGTTAACCACAATATCTTAATCACAAACATACC 1554
|||||||||||||| |||||||| || ||||||||||| ||| | ||||||||||||||
Sbjct 818 TGAGCTTTTTGGACCCAACAGTGTCGGGGTTAACCACAACATCCTCATCACAAACATACC 877
Query 1555 GATAGGATCATTGATCTATGGATTCTTGGCTGCATTGGTCTATGACTCACATGGTTTCAC 1614
||||||||||||| ||||||| ||||| ||||| ||||||||||| || ||| | | |
Sbjct 878 GATAGGATCATTGGTCTATGGGTTCTTAGCTGCTTTGGTCTATGAATCCCATAGCGTGGC 937
Query 1615 CGGGACCAAATCAATGACCTCGGAGTCGGTGGTGTGTATGGGACGAGATTGTTAT-TACT 1673
|| | |||| ||| | ||||||| | |||||||||||||| ||||| | ||
Sbjct 938 TGG--C----TCAAAGACA--G-AGTCGGTTATATGTATGGGACGAGACTGTTACCTCCT 988
Query 1674 TGACCTTTGTGTGGTGGGGTTGCTTGTCTCTTCTTGGGCTAGGTTCGAGTCTTGTGTTGT 1733
|| |||||||||||||| |||||||| | |||| |||| ||| ||| |||| ||||
Sbjct 989 A-ACGTTTGTGTGGTGGGGATGCTTGTCGGTGATTGGACTAGCTTCAAGTGTTGTCTTGT 1047
Query 1734 TTATT-AGAACTAGACGAGCTTATCAACGGTTTGAACAAGCTCGTATAAGTTCGAA-CAT 1791
|| || |||||||||||||| |||||||| |||||||||| ||| |||| ||| || |||
Sbjct 1048 TT-TTGAGAACTAGACGAGCCTATCAACGTTTTGAACAAGATCGGATAACTTC-AAGCAT 1105
Query 1792 -CAACGACTCTTAGAAATTT 1810
| | | |||||||| |||
Sbjct 1106 GCT-CTATTCTTAGAATTTT 1124
> Ahg915596 jgi|Araly1|915596|Al_scaffold_0008_347
Length=1365
Score = 549 bits (297), Expect = 3e-155
Identities = 479/566 (85%), Gaps = 15/566 (3%)
Strand=Plus/Plus
Query 395 GTGTTTCTCTGTTGCTTACTTGCTGGTTTAAGTATCTGTTGGTTCAACACTGTCTGCTTT 454
|||||||| ||||| ||||| ||||| ||||||| |||||||| ||||| |||||||||
Sbjct 103 GTGTTTCTATGTTGTTTACTAGCTGGGCTAAGTATTTGTTGGTTTAACACAGTCTGCTTT 162
Query 455 GTGCTCTGCATTAGTAACTTCCCTGCAAACAGATCACTTGCTCTTTCCCTCACAGTGAG- 513
||||||||||| || ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 163 GTGCTCTGCATCAGAAACTTTCCTGCAAACAGATCACTTGCTCTTTCTCTCACAGTGAGC 222
Query 514 TTTCAATGGTGTAAGCGCTGCTTTATATACTCTTGCTTACAACGCAATCAATCCAACTTC 573
||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||| |||
Sbjct 223 TTT-AATGGCGTAAGTGCTGCTTTATACACTCTTGCTTACAACGCAATCAATCCTGTTTC 281
Query 574 TCCAGAGCTATATCTTCTTTTGAACGCTCTTATACCGCTCATTGTCTCTTTCACTGCTAT 633
| |||||||||| || ||||| ||||||||| |||| || ||||||| ||| ||||| |
Sbjct 282 TACAGAGCTATACCTACTTTTAAACGCTCTTGTACCTCTTTTTGTCTCATTCGCTGCTCT 341
Query 634 CATCCCGATTCTTCGTCAACCGCCTTTTGAGCCTCTTCCACCAGATGGAGTTCGTCGTGA 693
||| || |||||||| ||||||||| |||| ||||||||||| ||||||||||| | ||
Sbjct 342 CATTCCTATTCTTCGCCAACCGCCTCTTGAACCTCTTCCACCCGATGGAGTTCGAAGAGA 401
Query 694 CTCTCTCATGTTTCTATTGCTCAACATACTCGCTGCT-TTAAACGGTGTTTATCTCCTTC 752
||||||||||||||||||||| |||||| | || | | || |||||||||||||| ||||
Sbjct 402 CTCTCTCATGTTTCTATTGCTTAACATATTAGC-GGTCTTGAACGGTGTTTATCTGCTTC 460
Query 753 TCTTTGGATCAAACTCCTCTGATTTAACCTCTGCTCGTCTACTCTTTGGTGGAGCAATCC 812
||||| | ||||| | |||||| |||| || |||||||| |||||| ||||| |||| |
Sbjct 461 TCTTTCGTTCAAAGACTTCTGATGTAACTTCAGCTCGTCTTCTCTTTAGTGGATCAATAC 520
Query 813 TCCTCTTGGTATTC--CCTTTATGTATTCCCGGTTTAGTC-ATCGCCCGGAATTGGTATA 869
| ||||| | |||| ||| |||| |||| ||| ||||| || || || |||||||||
Sbjct 521 TTCTCTT-G-ATTCTTCCTCTATGCCTTCCTGGTCTAGTCTAT-GCTCGTAATTGGTAT- 576
Query 870 ACCGCAC-A-ATCCACACTAGTTTCCGTCTAGAAGGTTCTGGTTTCATTCTTGTTGATCC 927
| ||| | |||||| | ||||||||| |||||||||||||||||||||||||||||
Sbjct 577 -CTACACAATATCCACTCCAGTTTCCGTTTAGAAGGTTCTGGTTTCATTCTTGTTGATGT 635
Query 928 TGATGAGCTTGAGTTGCATAAAGGGA 953
||||||||||||| ||||||| ||||
Sbjct 636 TGATGAGCTTGAGATGCATAA-GGGA 660
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 72181014275
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5