BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G19500.1 Length=4313 Score E Sequences producing significant alignments: (Bits) Value Ahg890226 jgi|Araly1|890226|Al_scaffold_0007_2212 2433 0.0 Ahg925117 jgi|Araly1|925117|scaffold_200678.1 2213 0.0 Ahg494346 jgi|Araly1|494346|fgenesh2_kg.8__162__AT5G46260.1 71.3 6e-11 Ahg915424 jgi|Araly1|915424|Al_scaffold_0008_175 69.4 2e-10 > Ahg890226 jgi|Araly1|890226|Al_scaffold_0007_2212 Length=3369 Score = 2433 bits (1317), Expect = 0.0 Identities = 2042/2386 (86%), Gaps = 73/2386 (3%) Strand=Plus/Plus Query 1680 GCCAATGATGTCATTGATTTTCTTCGCACACGGCAG-GTTTTAGGCA-GCA--C--T-GA 1732 ||||| || ||||||||||||||||||| |||||| || | |||| | | | | || Sbjct 904 GCCAAAGACGTCATTGATTTTCTTCGCATGCGGCAGACTTCT-GGCATGGAGGCTGTCGA 962 Query 1733 GGCTCTCGTTGACCGCCTCATTTTCA-GTAGTGAGGCATTTGGCATAAAACCTGA-GGAA 1790 |||||||| || ||||| || || ||||||| |||||| | ||| | ||| Sbjct 963 GGCTCTCGCTGGTTACCTCAAGGCCATGT-GTGAGGCGCATGGCATCAGACC-AATGGAC 1020 Query 1791 AACCCTTTTCGCAGCCAAGCTGTAACATCGTACTTGAAGGCGGCCAGGGATATGAC-ACG 1849 || ||||||||||||| |||||| ||||| ||| | ||| | || || || ||||| | | Sbjct 1021 AATCCTTTTCGCAGCCTAGCTGTGACATCATACCTAAAGTCAGCAAGTGAGATGACTA-G 1079 Query 1850 AGAAAAAGAATGCATACTT-GTGTTTTCGTGCCACGACAACCTTGATGTAGATGAAACAT 1908 |||||||||||||||| || || || |||||| | || |||| ||||||||| || |||| Sbjct 1080 AGAAAAAGAATGCATA-TTAGTCTTCTCGTGCAATGAAAACCATGATGTAGACGAGACAT 1138 Query 1909 CTTTCATTGAAGCCATCTCAAAAGAATTGCACAAGC-AGGGGTTCATCCCTTTGACATAT 1967 |||| || |||||||| |||||||| || ||||||| || || ||| ||| |||| ||| Sbjct 1139 CTTTTATCGAAGCCATTTCAAAAGAGTTACACAAGCGAGAGG-TCACCCCGTTGATGTAT 1197 Query 1968 AATCTTTTGGGCAGAGAGAACCTCGATGAGGAGATGTTATACGGATCTAGAGTCGGTATC 2027 ||||| || ||||||||||||| ||||| ||||| ||||| ||||||| || ||||| Sbjct 1198 AATCTACTGAGCAGAGAGAACCTGGATGAAAAGATGCTATACAGATCTAGTGTTGGTATT 1257 Query 2028 ATGATACTTTCA-AGTAGTTATGTTTCTTCTAGACAGTCCCTGGATCACCTGGTTGCAGT 2086 |||||||||||| | |||||||| || |||||||||| | || ||||| ||||| | | | Sbjct 1258 ATGATACTTTCACA-TAGTTATGCTTGTTCTAGACAGGCTCTTGATCATCTGGTGGAAAT 1316 Query 2087 TATGGAGCATTGGAAAACAACAGACCTTGTAATTATTCCTATATATTTTAAAGTAAGACT 2146 ||||||||| ||||| ||| | |||||||||||||||||||||||||||| || | ||| Sbjct 1317 CATGGAGCATGGGAAAGCAAGAAACCTTGTAATTATTCCTATATATTTTAAGGTGACACT 1376 Query 2147 TTCAGACATTTGTGGGTTGAAAGGCAGGTTTGAAGCAGCGTT-TCTGCAGCTTCATAT-G 2204 ||||||||||||||||||| |||||||||||||| || || ||||||| | |||| | Sbjct 1377 TTCAGACATTTGTGGGTTGGAAGGCAGGTTTGAACCA-ATTTATCTGCAG--T-ATATGG 1432 Query 2205 --TCT-CTCCAG-GAAGACAGAGTTCAGAAATGGAAGGCGGCTATGTCTGAAATAGTGTC 2260 ||| | |||| ||| |||||||||||||||||| ||||||||| ||||||||| ||| Sbjct 1433 ATTCTGC-CCAGCTAAG-CAGAGTTCAGAAATGGAAAGCGGCTATGGCTGAAATAGCGTC 1490 Query 2261 CATCGGTGGACATGAAT-GGACCAAGGGAAGTCA-GTTTATTCTTGCCGAGGAAGTTGTA 2318 ||||| ||||||||||| ||| ||| |||| || |||| | |||||||||||||||||| Sbjct 1491 CATCGATGGACATGAATGGGAAAAAGAGAAG-CAGGTTT-TGCTTGCCGAGGAAGTTGTA 1548 Query 2319 AGAAATGCATCCTTAAGGCTATA-TCTGAAAAGTAGCAAGAATCTGCTTGGAATCTTAGC 2377 ||| | |||| ||||| ||||| || ||||| |||||||||||| || | |||||||| Sbjct 1549 AGAGACGCATGCTTAAACCTATATTC-GAAAAACAGCAAGAATCTGATTAGCATCTTAGC 1607 Query 2378 GTTGTTAAATCACTCCCAGTCTACAGACGTGGAAATTATGGGAATCTGGGGTATAGCAGG 2437 || ||||||||||||||| || ||| |||||||||| ||||| |||||||||| || || Sbjct 1608 ATTTTTAAATCACTCCCAGCCTTCAGGCGTGGAAATTGTGGGACTCTGGGGTATGGCTGG 1667 Query 2438 AATAGGTAAGACATCGATTGCAAGAGAAATATTTGAATTACAT-GCTCC-ACATTATGAT 2495 ||||||||||||||| |||||||||||||| |||||| || | ||||| | | |||||| Sbjct 1668 AATAGGTAAGACATCCATTGCAAGAGAAATTTTTGAAATA-TTAGCTCCGA-AATATGAT 1725 Query 2496 TTCTGTTACTTCCTGCAAGACTTTCATCTAATGTGTCAGATGAAAAGGCCGAGGCAATTG 2555 || |||||||| |||||||||||| |||| ||| |||| | |||| ||| ||| ||| || Sbjct 1726 TTTTGTTACTTTCTGCAAGACTTTTATCTTATGAGTCAAAAGAAAGGGCTGAGACAAATG 1785 Query 2556 CGTGAAGATTT-TATCTCAAAATTGTTTGGGGAAG-AAAA--AGGTCTAGGTGC-TAGTG 2610 ||||| ||||| | |||| ||| | || |||||| |||| | || || |||| || || Sbjct 1786 CGTGATGATTTCT-TCTCTAAAGTATTCAGGGAAGAAAAACTAAGTATAAGTGCTTA-TG 1843 Query 2611 ATGTAAAGCCAAGTTTCATGAGGGACTGGTTCCATaaaaaaaCGATTCTTCTCGTTCTTG 2670 || |||| || |||||||||||||| |||||||| || |||||||||||||| ||||| | Sbjct 1844 ATATAAAACCGAGTTTCATGAGGGATTGGTTCCACAAGAAAACGATTCTTCTTGTTCTCG 1903 Query 2671 ATGACGTGAGTAATGCCAGAGATGCAGAAGCTGTAATCGGAGGGTTTGGCTGGTTTTCTC 2730 |||||||||| |||||||||||||||||||||| | |||||||||||||||||||||| Sbjct 1904 ATGACGTGAGCGATGCCAGAGATGCAGAAGCTGTTGTTGGAGGGTTTGGCTGGTTTTCTC 1963 Query 2731 ATGGACACAGAATCATCTTAACCTCTAGGAGTAAACAAGTTCTTGTACAGTGTAAGGTTA 2790 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1964 ATGGACACAGAATCATCTTAACCTCTAGGAGAAAACAAGTTCTTGTACAGTGTAAGGTTA 2023 Query 2791 AAAAGCCATACGAGATCCAAAAATTAAGCGATTTTGAATCGTTTCGTCTCTGCAAACAAT 2850 || || ||||| |||||||||| ||| |||| ||||||||||| |||||||||||||||| Sbjct 2024 AAGAGACATACAAGATCCAAAAGTTATGCGAGTTTGAATCGTTACGTCTCTGCAAACAAT 2083 Query 2851 ATTTGGATGGCGAAAATCCGGTCATCTCT-GAGCTTATCAGCTGCAGTAGTGGTATTCCA 2909 |||| ||| |||| | |||||||| | ||||| || |||||||||||||| |||||| Sbjct 2084 ATTTAAATGAAGAAAGTGGGGTCATCT-TGGAGCTGATGAGCTGCAGTAGTGGCATTCCA 2142 Query 2910 TTGGCTCTCAAACTTTT-AGTTTCCTCTGTATCAAAGCAGTATAT-AACGAATATGAAAG 2967 |||||||||||| |||| |||| |||| ||||||||||| | || ||| ||| |||| | Sbjct 2143 TTGGCTCTCAAAGTTTTGGGTTT-CTCTTTATCAAAGCAGCACATAAAC-AATTTGAAGG 2200 Query 2968 ACCATCTCCAAAGCTTGAGGAAAGATCCTCCTACTCAGATTCAAGAAGCATTTCGGAGAA 3027 | |||||||| |||||| ||||| ||||||| ||||||||||| ||||||||||||||| Sbjct 2201 AACATCTCCATAGCTTGCGGAAAAATCCTCCAACTCAGATTCAGGAAGCATTTCGGAGAT 2260 Query 3028 GTTTTGATGGACTAGATGAAAACGAGAAA-AACATATTTTTGGATCTTGCATGTTTTTTC 3086 | ||||||||||||||||||||||| ||| |||||||||||||| |||||||||||||| Sbjct 2261 GCTTTGATGGACTAGATGAAAACGA-AAAGAACATATTTTTGGACCTTGCATGTTTTTTT 2319 Query 3087 AG-GGGGCAGAGCAAAGATTATGCGGTGCTATTACTTGATGCTTGTGGtttttttACATA 3145 || |||| ||| || |||| ||| |||| |||||||||||||||||| |||||||| || Sbjct 2320 AGAGGGG-AGAACATAGATCATGTGGTGAAATTACTTGATGCTTGTGGGTTTTTTACGTA 2378 Query 3146 TATGGGAATCTGTGAGCTCATTGACGAGTCACTCATTAGCCTTGTAGACAACAAGATAGA 3205 | ||||||||||||| |||||||||||||| |||||||||||| | ||||| | |||||| Sbjct 2379 TTTGGGAATCTGTGATCTCATTGACGAGTCTCTCATTAGCCTTTTGGACAATAGGATAGA 2438 Query 3206 GATGCCTATTCCTTTTCAAGACATGGGCCGAATTATTGTTCATGAAGAAGATGAGGATCC 3265 ||| |||||||||||||||||||| || ||| ||||||||||||||||||| |||||||| Sbjct 2439 GATCCCTATTCCTTTTCAAGACATTGGTCGATTTATTGTTCATGAAGAAGACGAGGATCC 2498 Query 3266 ATGTGAACGTAGCAGATTGTGGGACTCGAAGGACATCGTTGATGTTTTGACAAACAATTC 3325 || ||||||||||||||||||||||| || ||||||| ||||||||||| ||||||||| Sbjct 2499 TTGCGAACGTAGCAGATTGTGGGACTCTAATGACATCGCTGATGTTTTGAGAAACAATTC 2558 Query 3326 AGGAACAGAAGCAATTGAGGGCATCTTCCTGGATGCGTCTGACTTGACCTGCGAGCTT-A 3384 |||||| ||||||||||| |||||||||||||||||||||| | ||||||| ||| || | Sbjct 2559 AGGAACTGAAGCAATTGAAGGCATCTTCCTGGATGCGTCTGTCCTGACCTGTGAG-TTGA 2617 Query 3385 GTCCTACTGTGTTTGGTAAGATGTATAATCTTAGATTGCTGAAGTTCTATTGTTCAACCT 3444 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2618 GTCCTACTGTGTTTGGTAAGATGTATAATCTTAGATTGCTGAAGTTCTATTGTTCCACCT 2677 Query 3445 CTGGGAACCAGTGCAAGCTTACTCTACCTCACGGCCTAGACACTTTGCCTGATGAGCTAA 3504 ||| ||| |||| ||||| | ||||||||| ||||| |||||||||||||||||||||| Sbjct 2678 CTGAGAATGAGTGTAAGCTAAGTCTACCTCAAGGCCTCGACACTTTGCCTGATGAGCTAA 2737 Query 3505 GTCTACTTCACTGGGAGAATTACCCTCTGGTTTACTTGCCTCAGAAATTTAATCCTGTGA 3564 | ||||||||||||||||| |||||||||| ||||||||||| ||||||||||||| || Sbjct 2738 GGCTACTTCACTGGGAGAACTACCCTCTGGAATACTTGCCTCATAAATTTAATCCTGAGA 2797 Query 3565 ACCTTGTAGAGTTAAACATGCCTTATAGCAACATGGAGAAGTTGTGGGAAGGAAAGAAAA 3624 ||||||||||| |||||||||| |||||||||||||| ||||| |||||||||||||||| Sbjct 2798 ACCTTGTAGAGATAAACATGCCATATAGCAACATGGAAAAGTTATGGGAAGGAAAGAAAA 2857 Query 3625 ATCTCGAGAAGCTAAAGAACATCAAACTGAGTCACTCCAGAGAATTAACTGATATCCTGA 3684 |||| |||||||||||||| |||||| ||||| |||||||| |||| ||||||||||||| Sbjct 2858 ATCTTGAGAAGCTAAAGAATATCAAATTGAGTTACTCCAGAAAATTGACTGATATCCTGA 2917 Query 3685 TGTTATCAGAAGCCCTGAACCTGGAACACATTGATCTCGAAGGGTGTACGAGTCTGATTG 3744 |||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||| Sbjct 2918 TGTTATCAGAAGCCCTGAACCTTGAACATATTGATCTCGAAGGGTGTACAAGTCTGATTG 2977 Query 3745 ATGTTAGCATGTCTATTC-CT-TGTTGTGGGAAGCTTGTTTCCTTGAATATGAAAGACTG 3802 ||||||||| ||||||| | | ||| || ||||||||||||||||||||||||||||| Sbjct 2978 ATGTTAGCACATCTATTCGCCATCTTG-GG-AAGCTTGTTTCCTTGAATATGAAAGACTG 3035 Query 3803 TTCTCGTTTGCGAAGTCTGCCTTCTATGGTTGATTTAACAACTCTCAAGCTTCTTAATTT 3862 ||| ||||||| || |||||| || ||||| |||||||| ||||||||| |||||||| Sbjct 3036 TTCCCGTTTGCAAACTCTGCCGTCCATGGTCAATTTAACATCTCTCAAGCGCCTTAATTT 3095 Query 3863 GTCTGGCTGCTCAGAATTTGAGGATATTCAGGATTTTGCACCAAACCTGGAAGAGATATA 3922 |||||||||||||| |||| || || ||||||||||||||||||||||||||| || | Sbjct 3096 TTCTGGCTGCTCAGAGCTTGATGAGATCCAGGATTTTGCACCAAACCTGGAAGAGTTACA 3155 Query 3923 TCTAGCTGGGACAT-CCATTAGAGAGCTTCCGTTGTCAATC-AGGAATCTCACTGAACTT 3980 |||||||||| | | |||||||||| |||| || |||||| || ||||||||||||||| Sbjct 3156 TCTAGCTGGGTC-TGCCATTAGAGAAATTCCATTCTCAATCTAG-AATCTCACTGAACTT 3213 Query 3981 GTTACGCTAGATCTGGAGAACTGC-GAAAGGCTTCAGGAAA-TGCC 4024 |||||||||||||||||||||||| ||| |||||||| ||| |||| Sbjct 3214 GTTACGCTAGATCTGGAGAACTGCAGAA-GGCTTCAG-AAACTGCC 3257 > Ahg925117 jgi|Araly1|925117|scaffold_200678.1 Length=2326 Score = 2213 bits (1198), Expect = 0.0 Identities = 1880/2204 (85%), Gaps = 67/2204 (3%) Strand=Plus/Plus Query 1856 AGAATGCATACT-TGTGTTTTCGTGCCACGACAACCTTGATGTAGATGAAACATC-TTTC 1913 ||||||| || | || ||||| ||| | |||| || |||||| || || ||| | ||| Sbjct 32 AGAATGCGTA-TCAGTCTTTTCATGCAATGACAGCCATGATGTGGACGAGACA-CAGTTC 89 Query 1914 ATTGAAGCCATCTCAAAAGAATTGCACAAGCAG-GGGTTCATC-CCTTTGACATATAATC 1971 || |||||||||| |||||| |||||| ||| | ||| ||| | |||||||| ||||||| Sbjct 90 ATGGAAGCCATCTTAAAAGAGTTGCACGAGC-GAGGGATCA-CACCTTTGACGTATAATC 147 Query 1972 TTTTGGGCAGAGAGAACCTCG-ATG-AGGAGATGTTATACGGATCTAGAGTCGGTATCAT 2029 ||| || |||||||| || | | | | || |||||| || ||||||| || ||||| || Sbjct 148 TTTCAGGAAGAGAGAA-CTTGAACGTA-GAAATGTTAAACAGATCTAGTGTTGGTATTAT 205 Query 2030 GATACTTTCAAGTAGTTATGTTTCTTCTAGACAGTCCCTGGATCACCTGGTTGCAGTTAT 2089 | || |||||| |||||| |||| ||||| ||||||| ||||||| || || ||| | || Sbjct 206 GGTATTTTCAAATAGTTACGTTTGTTCTAAACAGTCCTTGGATCATCTTGTGGCAATCAT 265 Query 2090 GGAGCATTGGAAAAC-AACAGACCTTGTAATTATTCCTATATATTTTAAAGTAAGACTTT 2148 ||||||||||||| | || |||| |||||||||| ||||||||||||||||| | || || Sbjct 266 GGAGCATTGGAAAGCGAA-AGACATTGTAATTATCCCTATATATTTTAAAGTGACAC-TT 323 Query 2149 C-AGACATTTGTGGGTTGAAAGGCAGGTTTGAAGCAGCGTTTCTGCAGCTTCATATGTCT 2207 | | ||||||||||||||||||||| || ||||||||| ||| |||||||||| | |||| Sbjct 324 CAACACATTTGTGGGTTGAAAGGCATGTCTGAAGCAGCATTTATGCAGCTTCAGAGGTCT 383 Query 2208 CTCCAGGAAGACAGAGTTCAGAAATGGAAGGCGGCTATGTCTGAAATAGTGTCCATCGGT 2267 |||||||||||||||||||||||||||||| |||| || ||||||||| ||||| | | Sbjct 384 CTCCAGGAAGACAGAGTTCAGAAATGGAAGATGGCTCTGGCTGAAATAGAATCCATTGAT 443 Query 2268 GGACATGAATGGAC-CAAGGGAAGTCAGTTTATTCTTGCCGAGGAAGTTGTAAGAAATGC 2326 |||||||||||||| ||||| | | || |||| ||||| ||||||||||| ||||| || Sbjct 444 GGACATGAATGGACAAAAGGG-ACTGAGGTTATGCTTGCTGAGGAAGTTGTTAGAAACGC 502 Query 2327 ATCCTTAAGGCTATA-TCTGAAAAGTAGCAAGAATCTGCTTGGAATCTTAGCGTTGTTAA 2385 || ||||||| |||| || ||||| ||||||||||||| | |||||||||| ||||||| Sbjct 503 ATGCTTAAGGTTATATTC-GAAAAATAGCAAGAATCTGGTCAGAATCTTAGCATTGTTAA 561 Query 2386 ATCACTCCCAGT-CTACAGACG-TGGAAATTATGGGAATCTGGGGTATAGCAGGAATAGG 2443 |||| ||||| | || |||| | | |||||| ||||||| |||||||| ||||||||||| Sbjct 562 ATCAGTCCCA-TCCTTCAGATGCT-GAAATTGTGGGAATTTGGGGTATGGCAGGAATAGG 619 Query 2444 TAAGACATCGATTGCAAGAGAAATATTT-GAATTACAT-GCTCCACATTATGATTTCTGT 2501 ||||||||| |||||||||||||| ||| ||||| | | |||||||| |||||| | ||| Sbjct 620 TAAGACATCCATTGCAAGAGAAATTTTTGGAATT-C-TAGCTCCACAATATGATATGTGT 677 Query 2502 TACTTCCTGCAAGACTTTCATCTAATGTGTCAGATGAAAA-GGCCGAGGCAATTGCGTGA 2560 ||||| |||||||||||| |||||| ||||| | |||| ||| ||||||| ||||||| Sbjct 678 TACTTTCTGCAAGACTTTGATCTAACATGTCA-AACAAAAGGGCTGAGGCAAATGCGTGA 736 Query 2561 AGATTTTA-TCTC-AAAATTGTTTGGGGAAG-AAAA--AGGTCTAGGTGCTAGTGATGTA 2615 || |||| | || |||| | |||||||||| |||| | || |||| ||| |||| || Sbjct 737 TGA-TTTATTTTCTAAAA-TATTTGGGGAAGAAAAACTAAGTATAGGCGCTTCTGATATA 794 Query 2616 AAGCCAAGTTTCATGAGGGACTGGTTCCATaaaaaaaCGATTCTTCTCGTTCTTGATGAC 2675 || | ||||||||||||||||||||||| |||||||||||||||| ||||| |||||| Sbjct 795 AAAACGAGTTTCATGAGGGACTGGTTCCAGGAAAAAACGATTCTTCTTGTTCTCGATGAC 854 Query 2676 GTGAGTAATGCCAGAGATGCAGAAGCTGTAATCGGAGGGTTTGGCTGGTTTTCTCATGGA 2735 |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct 855 GTGAGTAATGCCAGAGATGCAGAAGCTGTAGTTGGAGGGTTTGGCTGGTTTTCTCATGGA 914 Query 2736 CACAGAATCATCTTAACCTCTAGGAGTAAACAAGTTCTTGTACAGTGTAAGGTTAAAAAG 2795 |||||||||||| ||||||||||||| ||||||||||||||||| || | ||||||| || Sbjct 915 CACAGAATCATCATAACCTCTAGGAGAAAACAAGTTCTTGTACAATGCAGGGTTAAAGAG 974 Query 2796 CCATACGAGATCCAAAAATTAAGCGATTTTGAATCGTT-TCGTCTCTGCAAACAATATTT 2854 ||||||||||||||||| ||| |||| |||||||| || |||||||||||| |||||||| Sbjct 975 CCATACGAGATCCAAAAGTTATGCGAGTTTGAATC-TTCTCGTCTCTGCAAGCAATATTT 1033 Query 2855 GGATGGCGAAAATCCGGTCATCTCTGAGCTTATCAGCTGCAGTAGTGGTATTCCATTGGC 2914 | |||| |||||| ||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 1034 GAATGGAGAAAATGTGGTCATCTCAGAGCTTATGAGCTGCAGTAGTGGTATTCCATTGGC 1093 Query 2915 TCTCAAACTTTTAGTTTCCTCTGTATCAAAGCAGTATATAA-CGAATATGAAAGACCATC 2973 |||||| || | | ||||||||||||||||||| ||| || | |||||||| || |||| Sbjct 1094 TCTCAATGTTCTGGGTTCCTCTGTATCAAAGCAGCATAGAAGC-AATATGAAGGAACATC 1152 Query 2974 TCCAAAGCTTGAGGA-AAGATCCTCCTACTCAGATTCAAGAAGCATTTCGGAGAAGTTTT 3032 ||||||||||| ||| || ||||||| |||||||||||||| | ||| | || ||| ||| Sbjct 1153 TCCAAAGCTTGCGGAGAA-ATCCTCCAACTCAGATTCAAGACGAATTCCAGAAAAGCTTT 1211 Query 3033 GATGGACTAGATGAAAACGAGAAA-AACATATTTTTGGATCTTGCATGTTTTTTCAG-GG 3090 | ||||||||| |||||||| ||| ||||||||||||||||||||||||||||||| || Sbjct 1212 GGTGGACTAGACGAAAACGA-AAAGAACATATTTTTGGATCTTGCATGTTTTTTCACAGG 1270 Query 3091 GGCAGAGCAAAGATTATGCGGTGCTATTACTTGATGCTTGTGGtttttttACATATATGG 3150 || ||| ||||||| ||| ||||| | |||||||||||||||| |||||||||||| ||| Sbjct 1271 GG-AGAACAAAGATCATGTGGTGCAAATACTTGATGCTTGTGGGTTTTTTACATATTTGG 1329 Query 3151 GAATCTGTGAGCTCATTGACGAGTCACTCATTAGCCTTGTAGACAACAAGATAGAGATGC 3210 |||||||||| |||||||||||||| ||||||||| |||||||| | || || ||||||| Sbjct 1330 GAATCTGTGATCTCATTGACGAGTCTCTCATTAGCGTTGTAGACGATAAAATCGAGATGC 1389 Query 3211 CTATTCCTTTTCAAGACATGGGCCGAATTATTGTTCATGAAGAAGATGAGGATCCATGTG 3270 || ||||||||||||| || || ||| |||| ||||||||||||| ||||||||||| | Sbjct 1390 CTGTTCCTTTTCAAGATATTGGTCGATTTATAGTTCATGAAGAAGGCGAGGATCCATGCG 1449 Query 3271 AACGTAGCAGATTGTGGGACTCGAAGGACATCGTTGATGTTTTGACAAACAATTCAGGAA 3330 |||||||||||||||||||||| || ||||||| | |||| |||||| |||||| |||| Sbjct 1450 AACGTAGCAGATTGTGGGACTCTAAAGACATCGCTAATGTATTGACACGCAATTCCGGAA 1509 Query 3331 CAGAAGCAATTGAGGGCATCTTCCTGGATGCGTCTGACTTGACCTGCGAGCTTAGTCCTA 3390 | ||||| ||||| ||||| ||||||||||| |||||||||| || ||||||||||||| Sbjct 1510 CTGAAGCGATTGAAGGCATTTTCCTGGATGCTTCTGACTTGAACTATGAGCTTAGTCCTA 1569 Query 3391 CTGTGTTTGGTAAGATGTATA-ATCTTAGATTGCTGAAGTTCTATTGTTCAACCTCTGGG 3449 || ||||| |||||||||||| | || |||||||||||| |||||| ||| ||| ||||| Sbjct 1570 CTATGTTTAGTAAGATGTATAGA-CTAAGATTGCTGAAGCTCTATTTTTCCACCCCTGGG 1628 Query 3450 AACCAGTGCAAGCTTACTCTACCTCACGGCCTAGACACTTTGCCTGATGAGCTAAG-TCT 3508 |||||||||||||| | |||| |||| ||||| |||||||||| |||||||| || | | Sbjct 1629 AACCAGTGCAAGCTAAGTCTATCTCAAGGCCTCTACACTTTGCCCGATGAGCTCAGGT-T 1687 Query 3509 ACTTCACTGGGAGAATTACCCTCTGGTTTACTTGCCTCAGAAATTTAATCCTGTGAACCT 3568 |||||| ||||||||||| ||||||| ||||||||||||||||||||||||| || || Sbjct 1688 ACTTCATTGGGAGAATTATCCTCTGGAATACTTGCCTCAGAAATTTAATCCTGAAAATCT 1747 Query 3569 TGTAGAGTTAAACATGCCTTATAGCAACATGGAGAAGTTGTGGGAAGGAAAGAAAAATCT 3628 ||||||| |||||||||| |||||||||||||||||| | |||||||| ||||||||||| Sbjct 1748 TGTAGAGATAAACATGCCCTATAGCAACATGGAGAAGCTATGGGAAGGGAAGAAAAATCT 1807 Query 3629 CGAGAAGCTAAAGA-ACATCAAACTGAGTCACTCCAGAGAA-TTAACTGATATCCTGATG 3686 |||||||||||||| | || |||||||||||||||||| || |||||||| || || || Sbjct 1808 CGAGAAGCTAAAGAGA-ATTAAACTGAGTCACTCCAGA-AACTTAACTGACGTCATGGTG 1865 Query 3687 TTATCAGAAGCCCTGAACCTGGAACACATTGATCTCGAAGGGTGTACGAGTCTGATTGAT 3746 |||||||||||| ||||||| ||||| |||||||||||||| |||| |||||| |||| Sbjct 1866 TTATCAGAAGCCTTGAACCTTGAACATATTGATCTCGAAGGATGTATTAGTCTGGTTGAC 1925 Query 3747 GTTAGCATGTCTATTCCTTGTTGTGGGAAGCTTGTTTCCTTGAATATGAAAGACTGTTCT 3806 ||||||| ||||||||| ||||||||||||||||||| || ||| |||||||||||||| Sbjct 1926 GTTAGCACATCTATTCCTAGTTGTGGGAAGCTTGTTTCATTAAATTTGAAAGACTGTTCT 1985 Query 3807 C-GTTTGCGAAGTCTGCCTTCTATGGTTGATTTAACAACTCTCAAGCTTCTTAATTTGTC 3865 | ||| || |||||||||| | ||| ||| |||| | |||||||||||||| | |||| Sbjct 1986 CAGTT-GCAAAGTCTGCCTGCCATGTTTGGGTTAATATCTCTCAAGCTTCTTCGTATGTC 2044 Query 3866 TGGCTGCTCAGAATTTGAGGATATTCAGGATTTTGCACCAAACCTGGAAGAGATATATCT 3925 |||||||||||| || ||||| ||||||||||||||||||||| || ||||| ||||||| Sbjct 2045 TGGCTGCTCAGAGTTCGAGGAGATTCAGGATTTTGCACCAAACTTGAAAGAGTTATATCT 2104 Query 3926 AGCTGGGACAT-CCATTAGAG-AGCTTCCGTTGTCAATC-AGGAATCTCACTGAACTTGT 3982 ||||||||| | |||| | || | ||||| ||||||||| || ||||||||||||||| | Sbjct 2105 AGCTGGGAC-TGCCATAA-AGGAACTTCCATTGTCAATCGAG-AATCTCACTGAACTTAT 2161 Query 3983 TACGCTAGATCTGGAGAACTGCGA-AAGGCTTCAGGAAA-TGCC 4024 |||||| ||||| ||||||||| | |||||||||| ||| |||| Sbjct 2162 TACGCTTGATCTTGAGAACTGC-ACAAGGCTTCAG-AAACTGCC 2203 > Ahg494346 jgi|Araly1|494346|fgenesh2_kg.8__162__AT5G46260.1 Length=3513 Score = 71.3 bits (38), Expect = 6e-11 Identities = 66/78 (85%), Gaps = 7/78 (9%) Strand=Plus/Plus Query 729 TCTGAGAAAGCT-AGAATGGTCGGGATTTCGGGG--CCTTCAGGGATTGGTAAGACTACC 785 |||||| ||| | |||||||| || || | |||| || ||||||||||||||||||||| Sbjct 598 TCTGAGGAAG-TGAGAATGGTTGGTATAT-GGGGTTCC-TCAGGGATTGGTAAGACTACC 654 Query 786 ATCGCAAAAGCTCT-TTT 802 ||||||| |||||| ||| Sbjct 655 ATCGCAAGAGCTCTGTTT 672 > Ahg915424 jgi|Araly1|915424|Al_scaffold_0008_175 Length=3651 Score = 69.4 bits (37), Expect = 2e-10 Identities = 65/77 (84%), Gaps = 7/77 (9%) Strand=Plus/Plus Query 730 CTGAGAAAGCT-AGAATGGTCGGGATTTCGGGG--CCTTCAGGGATTGGTAAGACTACCA 786 ||||| ||| | |||||||| || || | |||| || |||||||||||||||||||||| Sbjct 602 CTGAGGAAG-TGAGAATGGTTGGTATAT-GGGGTTCC-TCAGGGATTGGTAAGACTACCA 658 Query 787 TCGCAAAAGCTCT-TTT 802 |||||| |||||| ||| Sbjct 659 TCGCAAGAGCTCTGTTT 675 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 163114757878 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5