BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G20430.1 Length=2746 Score E Sequences producing significant alignments: (Bits) Value Ahg354710 jgi|Araly1|354710|fgenesh1_pg.C_scaffold_7001883 3975 0.0 Ahg494534 jgi|Araly1|494534|fgenesh2_kg.8__350__AT5G44530.1 1862 0.0 Ahg890123 jgi|Araly1|890123|Al_scaffold_0007_2109 1847 0.0 > Ahg354710 jgi|Araly1|354710|fgenesh1_pg.C_scaffold_7001883 Length=2574 Score = 3975 bits (2152), Expect = 0.0 Identities = 2439/2579 (95%), Gaps = 13/2579 (1%) Strand=Plus/Plus Query 176 ATGAGGAGAGTTTTAATGGTGAATTTTGGGGTTTTACTTCTGTTCTGTTTTGGGGTTTTG 235 |||| ||||||||| |||||||||||||||||||| |||||||||||||||||| ||||| Sbjct 1 ATGATGAGAGTTTTGATGGTGAATTTTGGGGTTTTCCTTCTGTTCTGTTTTGGGTTTTTG 60 Query 236 TCGAATTCATTTGGACAAG---ATAATGGTGGTGATTCTGATATAAACTCTACTACGGCT 292 ||||| || |||||||||| |||||| ||||||||||||||||||||||||||||||| Sbjct 61 TCGAACTCCTTTGGACAAGATAATAATGCTGGTGATTCTGATATAAACTCTACTACGGCT 120 Query 293 GTTTACATTGTTACCCTGAGACAAGCTTCTTCTCTTCACCTTTTCCAACAAGAAGCAGAA 352 |||||||||||||| |||||||||||| |||||||||| |||||||| |||||| ||||| Sbjct 121 GTTTACATTGTTACTCTGAGACAAGCTCCTTCTCTTCATCTTTTCCAGCAAGAAACAGAA 180 Query 353 --GAAGTGAAAAGGGTCAGAGATC-AATCCAAACATGGAGACACTTCCAAGTTTACTAGA 409 ||| ||| ||||||||||| | ||||||||||||||||||||||||||||||||||| Sbjct 181 GTGAA--GAACAGGGTCAGAGA-CAAATCCAAACATGGAGACACTTCCAAGTTTACTAGA 237 Query 410 CCAAAACTCCAACCAAGGAACATTTCAAGGTCACGTTATTGGAGATCAAGAAGATCAGCA 469 |||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||| Sbjct 238 CCAAAACTCCAACCAAGGAACATTTCAAAGTCACGTTATTGGAGATCAAGGTGACCAGCA 297 Query 470 ATTGCTCAAGCTCATGACTCTTTGCTAAGAAATGCATTGAAGGGAGAGAAGTATATAAAG 529 |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||| Sbjct 298 ATTGCTCAAGCTCATGACTCTTTGTTGAGAAATGCATTGAAGGGAGAGAAGTATATAAAG 357 Query 530 CTCTATAGCTTCCATTATCTCATCAATGGTTTTGCTGTGTTTGTTAGCTCACAACAGGCT 589 || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 358 CTTTATAGCTTCCATTATCTCATCAATGGTTTTGCTGTCTTTGTTAGCTCACAACAGGCT 417 Query 590 GAGACTCTTTCAAGAAGAAGGGAAGTAGCAAACATAGTGTTGGATTTTTCTGTTAGGACG 649 |||| || ||||| ||| ||||||||||||||||||||||||||||||||||||| ||| Sbjct 418 GAGAAGCTGTCAAGGAGAGGGGAAGTAGCAAACATAGTGTTGGATTTTTCTGTTAGAACG 477 Query 650 GCAACAACTTATACACCTCAATTCATGGGTTTACCAAAAGGTGCATGGGTTAAAGAAGGT 709 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 478 GCAACAACTTATACACCTCAGTTCATGGGTCTACCAAAAGGTGCATGGGTTAAAGAAGGT 537 Query 710 GGATATGAAACTGCTGGAGAAGGAATTGTTATCGGGTTTATCGACACTGGCATTGATCCA 769 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 538 GGATTTGAAACTGCTGGAGAAGGAATTGTTATCGGGTTTATCGACACTGGCATTGACCCA 597 Query 770 ACTCACCCTAGTTTCAATGGCACTGACACTTCCCAGCGTCAGTATCCGATCCCTAATCAT 829 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 598 ACTCACCCTAGTTTCAATGGCACTGACACTTCCCAGCGTCAGTATCCGATCCCTAATCAT 657 Query 830 TTCTCAGGTGTTTGTGAAGTTACTCCGGATTTTCCATCAGGCTCCTGTAATAGGAAGCTT 889 ||||||||||||||||||||||| |||||||||||||| ||||| || | |||||||||| Sbjct 658 TTCTCAGGTGTTTGTGAAGTTACACCGGATTTTCCATCGGGCTCGTGCAGTAGGAAGCTT 717 Query 890 GTTGGAGCTCGCCATTTCGCGCAGTCAGCTATTACTAGAGGGATTTTCAATTCATCTGAA 949 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 718 GTTGGAGCCCGCCATTTCGCGCAGTCAGCTATTACTAGAGGCATTTTCAATTCATCTGAG 777 Query 950 GACTATGCTTCACCTTTTGACGGCGATGGCCATGGCACGCACACAGCTTCCATCGCAGCG 1009 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 778 GACTATGCTTCACCTTTTGACGGCGATGGCCATGGCACGCACACAGCTTCCATCGCAGCG 837 Query 1010 GGTAACCATGGTGTCTCAGCAGTAGTTTCTGGCCATAACTTTGGAAGTGCTAGTGGAATC 1069 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 838 GGTAACCATGGGGTCTCAGCAGTAGTTTCTGGTCATAACTTTGGAAGTGCTAGTGGAATC 897 Query 1070 GCTCCTCGTGCGCATATTTCTGTTTACAAGGCATTGTATAAGAGTTTTGGGGGATTTGCT 1129 ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 898 GCTCCTCGTGCACATATTTCTGTTTACAAGGCATTATATAAGAGTTTTGGGGGATTTGCT 957 Query 1130 GCAGATGTTGTTGCTGCTATAGACCAGGCAGCTCAAGATGGAGTTGACATATTAAGTCTA 1189 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 958 GCAGATGTTGTTGCTGCTATAGATCAGGCAGCTCAAGATGGAGTTGACATATTAAGTCTA 1017 Query 1190 TCCATCACACCTAATCGACGTCCTCCCGGTGTAGCCACGTTCTTTAACCCGTTAGATATG 1249 ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct 1018 TCCATCACACCAAATCGACGTCCTCCTGGTGTAGCCACGTTCTTTAACCCATTAGATATG 1077 Query 1250 GCCATGCTTTCCGCTGTTAAGGCCGGTATATTCGTTGTACAAGCTGCAGGAAACACAGGT 1309 || ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 1078 GCTATGCTATCCGCTGTTAAGGCTGGTATATTCGTTGTGCAAGCTGCAGGAAACACAGGT 1137 Query 1310 CCTTCTCCTAAGAGCATGTCCTCCTTCAGTCCATGGATTTTCACTGTTGGTGCTGCTTCT 1369 || |||||||||||||||||||||||||| |||||||||||||| |||||||||||| || Sbjct 1138 CCCTCTCCTAAGAGCATGTCCTCCTTCAGCCCATGGATTTTCACAGTTGGTGCTGCTACT 1197 Query 1370 CACGATCGAGACTACTCTAACTCGATAGTCCTAGGCAACAATGTATCTATTCCAGGCGTA 1429 |||||||||| |||||||| |||||| | ||||||||||||||||||||||||||| || Sbjct 1198 CACGATCGAGTTTACTCTAATTCGATAATTCTAGGCAACAATGTATCTATTCCAGGCATA 1257 Query 1430 GGACTTGCACTTCGTACAGATGAAGGCAAGAAGTACACAATGATCTCTGCTCTTGATGCG 1489 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1258 GGACTTGCACTTCCTACAGATGAAGGCAAGGTGTACACAATGATCTCTGCTCTTGATGCA 1317 Query 1490 TTGAAGAACAAAAGTTCAGTAGTAGACAAAGACATGTATGTAGGTGAATGCCAAGACTAT 1549 |||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||| Sbjct 1318 TTGAAGAACAAAAGTTTAGTACTCGACAAAGACATGTATGTAGGTGAATGCCAAGACTAT 1377 Query 1550 GGCAGCTTCGATAAAGATGTTATCCGTGGGAATCTACTGATATGTAGCTACTCTATCCGT 1609 | |||||||||||||||| | |||||||||||||| |||||||||||||||||||||||| Sbjct 1378 GACAGCTTCGATAAAGATATCATCCGTGGGAATCTTCTGATATGTAGCTACTCTATCCGT 1437 Query 1610 TTCGTCCTCGGGCTTTCCACTATTAAACAAGCTTTAGCTGTTGCCAAGAATCTATCTGCA 1669 ||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1438 TTCGTGCTCGGACTTTCCACTATTAAACAAGCTTTAGCTGTTACCAAGAATCTATCTGCA 1497 Query 1670 AAGGGTGTTGTGTTCTACATGGACCCTTATGTTCTTGGTTTTCAGATTAATCCTACACCG 1729 |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| Sbjct 1498 AAGGGTGTTGTGTTCTACATGGACCCTTATGTCCTTGGTTTTCAGATTAACCCTACACCA 1557 Query 1730 ATGGACATGCCCGGGATCATAATTCCATCCGCAGAAGATTCCAAGGTTTTACTCAAGTAC 1789 |||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1558 ATGGACATGCCCGGCATCATAATTCCATCCTCAGAAGATTCCAAGGTTTTACTCAAGTAC 1617 Query 1790 TATAACTCTTCTCTTGTAAGAGATGGAACAACCAAGGAGATTGTTAGATTTGGAGCAGTT 1849 ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| Sbjct 1618 TATAACTCTTCTCTTGTAAGAGATGGAACCACCAAAGAGATTGTTAGATTTGGGGCAGTT 1677 Query 1850 GCAGCCATTGCAGGTGGACAAAATGCTAACTTCAGTAACAGAGCTCCTAAGATTATGTAC 1909 || |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 1678 GCGGCCATTGCAGGTGGACAAAATGCTAACTTCAGTAACAGAGCTCCCAAGATAATGTAC 1737 Query 1910 TACTCAGCAAGAGGACCTGATCCACAAGACAGCCTTTTTAACGACGCCGACATTTTGAAA 1969 |||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 1738 TACTCAGCAAGAGGACCTGATCCAGAAGACAGCCTCTTTAACGACGCCGACATTTTGAAA 1797 Query 1970 CCAAATCTTGTAGCTCCTGGAAATTCCATTTGGGGCGCTTGGAGTTCCGCTGCCACTGAA 2029 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1798 CCAAATCTTGTAGCTCCTGGAAATTCCATTTGGGGTGCTTGGAGTTCCGCTGCCACTGAA 1857 Query 2030 TCCACTGAGTTTGAAGGAGAAAGTTTTGCGATGATGTCTGGTACGAGTATGGCTGCTCCT 2089 |||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct 1858 TCCACTGAGTTTGAAGGAGAGAGTTTCGCGATGATGTCTGGTACGAGTATGGCTGCTCCT 1917 Query 2090 CATGTAGCTGGTGTGGCTGCATTGGTCAAGCAGAAATTCAGAAAGTTTAGTCCTTCAGCT 2149 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || Sbjct 1918 CATGTAGCTGGTGTGGCTGCATTGGTCAAGCAGAAATTCAGAAAATTTAGTCCTTCATCT 1977 Query 2150 ATTGCATCTGCACTTTCAACAACCTCTGTTCTATTTGACAATAAAGGCGAGGCGATAATG 2209 |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||| Sbjct 1978 ATTGCATCTGCACTGTCAACAACCTCTGTTCTTTTTGACAATAAAGGTGAGGCGATAATG 2037 Query 2210 GCTCAACGTGCTTATGCTAATCCTGATCAAACCATATCTCCTGCTACCCCATTTGATATG 2269 ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct 2038 GCTCAACGTGCTTATGCTAATCCTGATCAAACCCTATCTCCTGCAACCCCATTTGATATG 2097 Query 2270 GGGAATGGCTTTGTGAATGCAACCGCAGCTTTGGATCCTGGCCTAATCTTTGATACTAGT 2329 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2098 GGGAATGGCTTTGTGAATGCAACCGCAGCTTTGGATCCTGGCCTAATCTTTGATACTAGT 2157 Query 2330 TTTGAAGACTATATGTCATTTCTTTGTGGCATCAATGGATCAGCTCCAGTGGTATTCAAC 2389 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 2158 TTTGAAGACTATATGTCATTTCTTTGTGGAATCAATGGATCAGCTCCAGTGGTTTTCAAC 2217 Query 2390 TACACCGGCACAAATTGCTTGCGGAACAATGCAACAATCAGCGGATCTGACCTTAATTTG 2449 |||||||||| |||||| |||| | ||||||||||||||||||| ||||||| |||||| Sbjct 2218 TACACCGGCAAAAATTGTTTGCTTAGCAATGCAACAATCAGCGGAGCTGACCTCAATTTG 2277 Query 2450 CCATCCATCACTGTATCGAAGCTTAACAACACTCGAACGGTCCAAAGACTAATGACAAAC 2509 |||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||| Sbjct 2278 CCATCCATCACTGTCGCGAGGCTTAACAACACTCGAACTATCCAAAGACTAATGACAAAC 2337 Query 2510 ATTGCTGGAAATGAGACCTATACTGTCAGTTTGATTACTCCTTTTGATGTTTTGAT-AAA 2568 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| Sbjct 2338 ATTGCTGGAAATGAGACCTATACTGTCAGTTTGATTCCTCCTTTTGATGTTTTGGTGAAA 2397 Query 2569 TGTATCTCCTACTCAATTCTCTATAGCCAGTGGAGAGACAAAGCTACTTAGTGTAATCCT 2628 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2398 -GTATCTCCTACTCAATTCTCTATAGCCAGTGGAGAGACAAAGCTACTTAGTGTAATCCT 2456 Query 2629 CACAGCAAAGAGGAACAGCTCTATTTCTAGTTTTGG-AGGGATCAAGCTGCTAGGAAACG 2687 ||||||||||| ||||||||||||| |||||||||| || | ||||||| | |||| || Sbjct 2457 CACAGCAAAGAAGAACAGCTCTATTGCTAGTTTTGGGAGAG-TCAAGCTTTTTGGAACCG 2515 Query 2688 CGGGACACATTGTTCGTATTCCGGTGTCTGTCACAGTGAAAATCGCCTCGAAACAATGA 2746 | ||||| |||||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct 2516 CAGGACATGTTGTTCATATTCCGATGTCTGTCACAGTGAAAATCGCCTCGAACCAATGA 2574 > Ahg494534 jgi|Araly1|494534|fgenesh2_kg.8__350__AT5G44530.1 Length=2867 Score = 1862 bits (1008), Expect = 0.0 Identities = 1941/2381 (82%), Gaps = 105/2381 (4%) Strand=Plus/Plus Query 409 ACCAAAACTCCAACCAAGGAACATTTCAAGGTCACGTTATTGG-AGATCAAGAAGAT--C 465 ||||||| | |||||||||||| ||||||| |||| || || || || | ||||| | Sbjct 435 ACCAAAATTGAAACCAAGGAACAATTCAAGGAAACGTCATGGGAAG-TC-A-AAGATACC 491 Query 466 AGCAATTGCTCAAGCTCATGACTCTTTGC-TAAGAAATG-CATTGAAGGGAGAGAAGTAT 523 | | |||||||| ||||||||||||| | | ||||| | |||| || |||||||||||| Sbjct 492 ATCTGTTGCTCAATCTCATGACTCTTT-CTTGAGAAA-GACATTAAAAGGAGAGAAGTAT 549 Query 524 ATAAAGCTCTATAGCTT-CCATTATCTCATCAATGGTTTTGCTGTGTTTGTTAGCTCACA 582 |||||||| ||||| || ||||||||| |||||||| |||||| |||||||||||||||| Sbjct 550 ATAAAGCTTTATAG-TTACCATTATCTAATCAATGGATTTGCTCTGTTTGTTAGCTCACA 608 Query 583 ACAGGCTGAGACTCTTTCAA-GAAGAAGGGAAGTAGCAAACATAGTGTTGGATTTTTCTG 641 ||||||||||| || |||| | ||||| ||||||||||||||||||||||||| |||| Sbjct 609 ACAGGCTGAGAAGCTGTCAATG-AGAAGAGAAGTAGCAAACATAGTGTTGGATTACTCTG 667 Query 642 TTAGGACGGCAACAACTTATACACCTCAATTCATGGGTTTACCAAAAGGTGCATGGGTTA 701 ||||||| |||||||||||||| || || || |||||||||||| |||| |||||||| | Sbjct 668 TTAGGACAGCAACAACTTATACCCCACAGTTTATGGGTTTACCACAAGGAGCATGGGTCA 727 Query 702 AAGAAGGTGGATATGAAACTGCTGGAGAAGGAATTGTTATCGGGTTTATCGACACTGGCA 761 |||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||| | Sbjct 728 AAGAAGGTGGATATGAGATTGCTGGAGAAGGAATTGTTATCGGGTTTATCGATACTGGGA 787 Query 762 TTGATCC-AACTCACCCTAGTTTCAATGGCACTGACACTTCCCAGCG-TCAGTATCCGAT 819 | ||||| || ||| ||||||||||||| || || || || |||| ||| ||||| || Sbjct 788 TCGATCCGAA-TCATCCTAGTTTCAATGACAATG--AC-TCTAAGCGTTCA-TATCCAAT 842 Query 820 CCCTAATCATTTCTCAGGTGTTTGTGAAGTTACTCCGGATTTTCCATCAGGCTCCTGTAA 879 |||||| |||||||||||||||||||||||||| ||||||||||| ||||| || || || Sbjct 843 CCCTAAGCATTTCTCAGGTGTTTGTGAAGTTACACCGGATTTTCCTTCAGGATCTTGCAA 902 Query 880 TAGGAAGCTTGTTGGAGCTC-GCCATTTCGCGCAGTCAGCTATTACTAGAGGGATTTTCA 938 || |||||| ||||||| | | ||||||||||| || ||| | || ||||| ||||| | Sbjct 903 TAAGAAGCTAATTGGAGC-CAGACATTTCGCGCAATCCGCTGTAACCAGAGGAATTTTTA 961 Query 939 ATTCATCTGAAGACTATGCTTCACCTTTTGACGGCGATGGCCATGGCACGCACACAGCTT 998 | ||||||||||| || ||||| ||||| || || ||||| ||||| || |||||||||| Sbjct 962 ACTCATCTGAAGAATACGCTTCTCCTTTCGATGGAGATGGACATGGAACACACACAGCTT 1021 Query 999 CCA-TCGCAGCGGGTAACCATGGTG-TCTCAGCAG-TAGTTTCTGGCCATAACTTTGGA- 1054 || | |||||||||||||| || | || ||| | |||||||| ||||||||||||| Sbjct 1022 -CAGTTGCAGCGGGTAACCACGGAGTTC-CAG-TGATAGTTTCTAACCATAACTTTGGAT 1078 Query 1055 AGTGCTAGTGGAATCGCTCCTCGTGCGCATATTTCTGTTTACAAGGCATTGTATAAGAGT 1114 | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1079 A-CGCTAGTGGAATCGCTCCTCGTGCATTTATTTCTGTTTACAAGGCATTGTATAAGAGT 1137 Query 1115 TTTGGGGGATTTGCTGCAGATGTTGTTGCTGCTATAGACCAGGCAGCTCAAGATGGAGTT 1174 ||||| || |||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 1138 TTTGGAGGTTTTGCTGCAGATGTTGTTGCAGCTATAGATCAGGCAGCTCAAGATGGAGTA 1197 Query 1175 GACATATTAAGTCTATCCATCACACCTAATCGACGTCCTCCCGGTGTAGCCACGTTCTTT 1234 || |||||||||||||| || ||||| |||||| ||||| ||||| ||||| |||||| Sbjct 1198 GATATATTAAGTCTATCAATTACACCGAATCGAAAACCTCCTGGTGTTGCCACTTTCTTT 1257 Query 1235 AACCCGT-TAGATATGGCCA-TGCTTTCCGCTGTTAAGGCCGGTATATTCGTTGTACAAG 1292 || || | | ||||||| || | ||||||||||| || ||||| || || || || |||| Sbjct 1258 AATCC-TATCGATATGG-CATTACTTTCCGCTGTAAAAGCCGGAATTTTTGTAGTCCAAG 1315 Query 1293 CTGCAGGAAACACAGGTCCTTCTCCTAAGAGCATGTCCTCCTTCAGTCCATGGATTTTCA 1352 |||| ||||| || ||||| | ||||| |||||||| || || ||||| |||||||||| Sbjct 1316 CTGCGGGAAATACCGGTCCAGCGCCTAAAAGCATGTCTTCTTTTAGTCCTTGGATTTTCA 1375 Query 1353 CTGTTGGTGCTGCTTCTCACGATCGAGACTACTCTAACTCGATAGTCCTAGGCAACAATG 1412 | ||||||||| ||||||| ||| ||| ||||| || || || | |||| ||||||| Sbjct 1376 CAGTTGGTGCTTCTTCTCATGATAGAGTTTACTCCAATTCTTTAATTTTAGGAAACAATG 1435 Query 1413 TATCTATTCCAGGCGTAGGACTT-GCACTTCGTACAGATGAAGGCAAGAAGTACACA-AT 1470 || |||||| |||| | ||| || ||| ||| ||| ||||| || |||| ||||| | || Sbjct 1436 TAACTATTCAAGGCATTGGA-TTCGCAATTCCTACGGATGATGGAAAGATGTACA-AGAT 1493 Query 1471 GATCTCTGCTCTTGATGCGTTGAAGAACAAAAGTTCAGT-AGTAGACAAAGACATGTATG 1529 |||||||||| || |||| || |||||||||| | | ||||| | ||| ||||||| Sbjct 1494 GATCTCTGCTTTTCATGCCTT---GAACAAAAGTAC-TTCTGTAGATAGAGATATGTATG 1549 Query 1530 TAGGTGAATGCCAAGACTATGGCAGCTTCGATAAAGATGTTATC-CGTGGGAATCTACTG 1588 |||||||||| ||||| |||| | || |||| ||||| || || || |||||||| ||| Sbjct 1550 TAGGTGAATGTCAAGATTATGAAAACTACGATCAAGATCTTGTCTCG-GGGAATCTTCTG 1608 Query 1589 ATATGTAGCTACTCTATC-CGTTTCGTCCTCGGGCTTTCCACTATTAAACAAGCTTTAGC 1647 ||||||||||||||| | ||||| | |||||| |||| ||||| ||||||||||||| Sbjct 1609 ATATGTAGCTACTCT-GCTCGTTTTATTCTCGGGATTTCGACTATAAAACAAGCTTTAGA 1667 Query 1648 TGTTGCCAAGAATCTATCTGCAAAGGGTGTTGTGTTCTACATGGACCCTTATGTTCTTGG 1707 ||||||||||||||||||||| | || || || ||||| || ||||| ||||||||||| Sbjct 1668 TGTTGCCAAGAATCTATCTGCGATTGGCGTGGTATTCTATATAGACCCGTATGTTCTTGG 1727 Query 1708 TTTTCAGATTAATCCTACACCGATGGACATGCCCGGGATCATAATTCCATCCGCAGAAGA 1767 |||| |||| ||||| ||||||||||| |||||||| |||||||||||||| | |||||| Sbjct 1728 TTTTGAGATCAATCCAACACCGATGGATATGCCCGGAATCATAATTCCATCTGTAGAAGA 1787 Query 1768 TTCCAA-G-G-TTTTACTCAAGTACTATAACTCTTCTCTTGTAAGAGATGGAACAACCAA 1824 ||| || | | |||||||||| |||||||||||||||||| |||||||||||| ||||| Sbjct 1788 TTCTAAGGTGATTTTACTCAAATACTATAACTCTTCTCTTCAAAGAGATGGAACCACCAA 1847 Query 1825 GGAGATTGTTAGATTTGGAGCAGTTGCAGCCATTGCAGGTGGACAAAATGCTAACTTCAG 1884 || |||||||| |||||||| ||||||||||||| ||| || |||||||||||||| Sbjct 1848 AGAAATTGTTAGTTTTGGAGCGGTTGCAGCCATTGAAGGCGGTTTAAATGCTAACTTCAA 1907 Query 1885 TAACAGAGCTCCTAAGATTATGTACTACTCAGCAAGAGGACCTGATCCACAAGACAGCCT 1944 ||| |||||||| ||| | ||||| ||||||||||||||||||||||| |||||| || Sbjct 1908 TAATAGAGCTCCCAAGGTAATGTATTACTCAGCAAGAGGACCTGATCCTGAAGACA-ACT 1966 Query 1945 -TTTTAACGACGCCGACATTTTGAAACCAAATCTTGTAGCTCCTGGAAATTCCATTTGGG 2003 |||||||||||| ||||| || ||||| || || |||||||||||||| || ||||||| Sbjct 1967 CTTTTAACGACGCAGACATATTAAAACCGAACCTCGTAGCTCCTGGAAACTCTATTTGGG 2026 Query 2004 GCGCTTGGAGTTCCGCTGCCACTGAATCCACTGAGTTTGAA-G-GAGAAAGTTTTGCGAT 2061 | ||||||||||| | | | || || || || ||||||||| | |||||| |||||||| Sbjct 2027 GTGCTTGGAGTTCTGTTTCAACCGATTCTACCGAGTTTGAAGGTGAGAAA--TTTGCGAT 2084 Query 2062 GATGTCTGGTACGAGTATGGCTGCTCCTCATGTAGCTGGTGTGGCTGCATTGGTCAAGCA 2121 |||||| ||||| |||||||||||||||||||||||||||||||||||||| |||| || Sbjct 2085 GATGTCCGGTACAAGTATGGCTGCTCCTCATGTAGCTGGTGTGGCTGCATTAATCAAACA 2144 Query 2122 GAAATT-CAGA-AAGTTTAGTCCTTCAGCTA-TTGCATCTGCACTTTCAACAACCT-CTG 2177 || || | | || |||| ||||||| | | |||||||||| ||||||||||| | | | Sbjct 2145 -AACTTACCCACAA-TTTACTCCTTCA-CAAATTGCATCTGCGCTTTCAACAAC-TGC-G 2199 Query 2178 -TTCT-ATTTGACAATAAAGGCGAGGC-GATAATGGCTCAACGTGCTTATGCTAATCCTG 2234 |||| | | || |||||||||| | | |||||||||||| || ||||| | ||||| | Sbjct 2200 CTTCTTAAT-GATAATAAAGGCG-GTCCGATAATGGCTCAGCGAACTTATTCCAATCCCG 2257 Query 2235 ATCAAA-CCA-TATCTCCTGCTACCCCATTTGATATGGGGAAT-GGCTTT-GTGAATGCA 2290 |||||| || ||| || || || || ||||||||||| || || ||| || |||||| Sbjct 2258 ATCAAAGCCTCTATA-CC-GCAACACCGTTTGATATGGG-AAGCGG-TTTCGTTAATGCA 2313 Query 2291 ACCGCAGCTTTGGATCCTGGCCTAATCTTTGATACTAGTTTTGAAGACTATATGTCATTT 2350 ||||||||||| || ||||| ||| | || ||||| ||||||||||| |||||||||||| Sbjct 2314 ACCGCAGCTTTAGACCCTGGTCTAGTATTCGATACAAGTTTTGAAGATTATATGTCATTT 2373 Query 2351 CTTTGTGGCATCAATGGATCAGCTCCAGT-GGTATTCAACTACACCGGCACAAATT-GCT 2408 |||||||| ||||| || || | ||| || |||||||||||||||||| | || ||| Sbjct 2374 CTTTGTGGGATCAACGGCTCGGATCC-GTTGGTATTCAACTACACCGG-AT---TTCGCT 2428 Query 2409 -TGCGG--AACAATGCAACAATCAGCGGATCTGACCTTAATTTGCCATCCATCACTGTAT 2465 | | || || ||||||||| || | |||||| |||||||| || || || || | Sbjct 2429 GTTCCACTAAAAACACAACAATCAATGGTTTTGACCTCAATTTGCCGTCAATTACAGTTT 2488 Query 2466 CGA-AGCTTAACAACACTCGAACGGTCCAAAGA-CTAATGACAAACATTGCTGGAAATGA 2523 | | | |||| ||| | || |||||||| | ||||| |||||| || |||||||| Sbjct 2489 CAACA-CTTAGTGGCACGCAAATTTTCCAAAGATC-AATGAGAAACATAGCCGGAAATGA 2546 Query 2524 GACCTATACTGTCAGTTTGATTACTCCTTTTGATGTTTTGAT-AAATGTATCTCCTACTC 2582 ||| || | ||| ||| || | |||||| || ||||| || ||| ||||| ||||||| Sbjct 2547 GACATACAATGTTGGTTGGAGTCCTCCTTATGGTGTTTCAATGAAA-GTATCACCTACTC 2605 Query 2583 AATTCTCTATAGCCAGTGG-AGAGACA-AAGCTACTTAGTGTAATCCTCACAGCAA-AGA 2639 |||| |||||||| | ||| ||| || ||| ||||||| |||| |||||| |||| | | Sbjct 2606 AATTTTCTATAGCGA-TGGGAGAAACTCAAG-TACTTAGCGTAACCCTCACGGCAACAAA 2663 Query 2640 GGAACAGCTCTATTTCTAGTTTTGG-AGGGATCAAGCT-GCTAGGAAACGCGGGACACAT 2697 | ||||| || | |||||||||||| || || | | | | ||||| | |||||||| Sbjct 2664 G-AACAGTTCCAGTTCTAGTTTTGGTAGAC-TCG-GATTGTTTGGAAATACAGGACACAT 2720 Query 2698 TGTTCGTATTCCGGTGTCTGTCACAGTGAAAATCGCCTCGA 2738 |||| |||||| || |||||| || ||||||||| |||| Sbjct 2721 TGTTAATATTCCTGTAACTGTCATAGCGAAAATCGCTTCGA 2761 > Ahg890123 jgi|Araly1|890123|Al_scaffold_0007_2109 Length=1218 Score = 1847 bits (1000), Expect = 0.0 Identities = 1134/1199 (95%), Gaps = 8/1199 (1%) Strand=Plus/Plus Query 1552 CAGCTTCGATAAAGATGTTATCCGTGGGAATCTACTGATATGTAGCTACTCTATCCGTTT 1611 |||||||||||||||| | |||||||||||||| |||||||||||||||||||||||||| Sbjct 24 CAGCTTCGATAAAGATATCATCCGTGGGAATCTTCTGATATGTAGCTACTCTATCCGTTT 83 Query 1612 CGTCCTCGGGCTTTCCACTATTAAACAAGCTTTAGCTGTTGCCAAGAATCTATCTGCAAA 1671 ||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 84 CGTGCTCGGACTTTCCACTATTAAACAAGCTTTAGCTGTTACCAAGAATCTATCTGCAAA 143 Query 1672 GGGTGTTGTGTTCTACATGGACCCTTATGTTCTTGGTTTTCAGATTAATCCTACACCGAT 1731 |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| || Sbjct 144 GGGTGTTGTGTTCTACATGGACCCTTATGTCCTTGGTTTTCAGATTAACCCTACACCAAT 203 Query 1732 GGACATGCCCGGGATCATAATTCCATCCGCAGAAGATTCCAAGGTTTTACTCAAGTACTA 1791 |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 204 GGACATGCCCGGCATCATAATTCCATCCTCAGAAGATTCCAAGGTTTTACTCAAGTACTA 263 Query 1792 TAACTCTTCTCTTGTAAGAGATGGAACAACCAAGGAGATTGTTAGATTTGGAGCAGTTGC 1851 ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| Sbjct 264 TAACTCTTCTCTTGTAAGAGATGGAACCACCAAAGAGATTGTTAGATTTGGGGCAGTTGC 323 Query 1852 AGCCATTGCAGGTGGACAAAATGCTAACTTCAGTAACAGAGCTCCTAAGATTATGTACTA 1911 |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 324 GGCCATTGCAGGTGGACAAAATGCTAACTTCAGTAACAGAGCTCCCAAGATAATGTACTA 383 Query 1912 CTCAGCAAGAGGACCTGATCCACAAGACAGCCTTTTTAACGACGCCGACATTTTGAAACC 1971 |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| Sbjct 384 CTCAGCAAGAGGACCTGATCCAGAAGACAGCCTCTTTAACGACGCCGACATTTTGAAACC 443 Query 1972 AAATCTTGTAGCTCCTGGAAATTCCATTTGGGGCGCTTGGAGTTCCGCTGCCACTGAATC 2031 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 444 AAATCTTGTAGCTCCTGGAAATTCCATTTGGGGTGCTTGGAGTTCCGCTGCCACTGAATC 503 Query 2032 CACTGAGTTTGAAGGAGAAAGTTTTGCGATGATGTCTGGTACGAGTATGGCTGCTCCTCA 2091 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 504 CACTGAGTTTGAAGGAGAGAGTTTCGCGATGATGTCTGGTACGAGTATGGCTGCTCCTCA 563 Query 2092 TGTAGCTGGTGTGGCTGCATTGGTCAAGCAGAAATTCAGAAAGTTTAGTCCTTCAGCTAT 2151 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 564 TGTAGCTGGTGTGGCTGCATTGGTCAAGCAGAAATTCAGAAAATTTAGTCCTTCATCTAT 623 Query 2152 TGCATCTGCACTTTCAACAACCTCTGTTCTATTTGACAATAAAGGCGAGGCGATAATGGC 2211 |||||||||||| ||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct 624 TGCATCTGCACTGTCAACAACCTCTGTTCTTTTTGACAATAAAGGTGAGGCGATAATGGC 683 Query 2212 TCAACGTGCTTATGCTAATCCTGATCAAACCATATCTCCTGCTACCCCATTTGATATGGG 2271 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct 684 TCAACGTGCTTATGCTAATCCTGATCAAACCCTATCTCCTGCAACCCCATTTGATATGGG 743 Query 2272 GAATGGCTTTGTGAATGCAACCGCAGCTTTGGATCCTGGCCTAATCTTTGATACTAGTTT 2331 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 744 GAATGGCTTTGTGAATGCAACCGCAGCTTTGGATCCTGGCCTAATCTTTGATACTAGTTT 803 Query 2332 TGAAGACTATATGTCATTTCTTTGTGGCATCAATGGATCAGCTCCAGTGGTATTCAACTA 2391 ||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct 804 TGAAGACCATATGTCATTTCTTTGTGGGATAAATGGATCAGCTCCAGTGGTATTCAACTA 863 Query 2392 CACCGGCACA-AATTG-CTTGCGGAACAATGCAACAATCAGCGGATCTGACCTTAATTTG 2449 ||| |||| | ||||| ||| | | ||||||||||||||||||||||||||| |||||| Sbjct 864 CACTGGCA-AGAATTGTCTT-CTTAGCAATGCAACAATCAGCGGATCTGACCTCAATTTG 921 Query 2450 CCATCCATCACTGTATCGAAG-CTTAACAACACTCGAACGGTCCAAAGACTAATGACAAA 2508 |||||||||||||| || ||| ||||||||||||||||| |||||||||||| ||||||| Sbjct 922 CCATCCATCACTGTCTC-AAGGCTTAACAACACTCGAACTGTCCAAAGACTATTGACAAA 980 Query 2509 CATTGCTGGAAATGAGACCTATACTGTCAGTTTGATTACTCCTTTTGATGTTTTGATAAA 2568 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | || Sbjct 981 CATTGCTGGAAATGAGACCTATACTGTCAGTTTGATTCCTCCTTTTGATGTTTTGGTGAA 1040 Query 2569 TGTATCTCCTACTCAATTCTCTATAGCCAGTGGAGAGACAAAGCTACTTAGTGTAATCCT 2628 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1041 GGTATCTCCTACTCAATTCTCTATAGCCAGTGGAGAGACAAAGCTACTTAGTGTAATCCT 1100 Query 2629 CACAGCAAAGAGGAACAGCTCTATTTCTAGTTTTGG-AGGGATCAAGCTGCTAGGAAACG 2687 ||||||||||| ||||||||||||| |||||||||| || | ||||||| | |||| || Sbjct 1101 CACAGCAAAGAAGAACAGCTCTATTGCTAGTTTTGGGAGAG-TCAAGCTTTTTGGAACCG 1159 Query 2688 CGGGACACATTGTTCGTATTCCGGTGTCTGTCACAGTGAAAATCGCCTCGAAACAATGA 2746 | ||||| |||||| ||||||| |||||||||||||||||||||||||||| |||||| Sbjct 1160 CAGGACATGTTGTTCATATTCCGATGTCTGTCACAGTGAAAATCGCCTCGAACCAATGA 1218 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 103605466400 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5