BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G20910.1
Length=3125
Score E
Sequences producing significant alignments: (Bits) Value
Ahg492795 jgi|Araly1|492795|fgenesh2_kg.7__2228__AT4G20910.1 4569 0.0
Ahg890100 jgi|Araly1|890100|Al_scaffold_0007_2086 649 0.0
> Ahg492795 jgi|Araly1|492795|fgenesh2_kg.7__2228__AT4G20910.1
Length=2947
Score = 4569 bits (2474), Expect = 0.0
Identities = 2804/2960 (95%), Gaps = 35/2960 (1%)
Strand=Plus/Plus
Query 1 ATTTCAGGGGTATGCACATTTTGCATAAAAGTT-CCAATCTTTCCTGATCGTTGACAATA 59
||||||||| | ||||||||||||||||||||| || |||||| |||||| |||||||||
Sbjct 1 ATTTCAGGGATCTGCACATTTTGCATAAAAGTTACC-ATCTTTGCTGATCTTTGACAATA 59
Query 60 TTTATGTGTACCCTTTTGTTTGTCTCAGTGTGTTAAAGAAGCTACATTGTGTTTGTGATG 119
|||||||||||| |||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct 60 GTTATGTGTACCC-TTTGCTTGTCTCAGTGTATTAAAGAAGCTACATTGTGTTTGTGATG 118
Query 120 GCCGGTGGTGGGAAGCATACTCCTACTCCAAAGGCGATTATACATCAGAAGTTTGGTGCT 179
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 119 GCGGGTGGTGGGAAGCATACTCCTACTCCAAAGGCGATTATACATCAGAAGTTTGGTGCT 178
Query 180 AAAGCAAGCTATACAGTTGAGGAAGTTCATGACTCTTCTCAGAGTGGTTGTCTAGGATTA 239
||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct 179 AAAGCAAGCTATAGAGTTGAGGAAGTTCATGACTCTTCTCAGAGTGGTTGTCCAGGTTTA 238
Query 240 GCAATTCCTCAAAAAGGTCCATGTCTCTATCGTTGCCACTTGCAGCTACCTGAATTTTCT 299
||||| |||||||||||||||||||||||||| ||||||||||||||||| || ||||||
Sbjct 239 GCAATACCTCAAAAAGGTCCATGTCTCTATCGCTGCCACTTGCAGCTACCAGACTTTTCT 298
Query 300 GTTGTGTCAAATGTCTTCAAGAAGAAGAAGGATTCTGAACAATCTGCTGCTGAATTGGCT 359
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 299 GTTGTATCAAATGTCTTCAAGAAGAAGAAGGATTCTGAACAATCTGCTGCTGAATTGGCT 358
Query 360 CTTGACAAGCTAGGCATTCGCCCTCAGAATGATGATCTTACTGTGGATGAAGCTAGGGAT 419
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 359 CTTGACAAGCTAGGCATTCGTCCTCAGAATGATGATCTTACTGTGGATGAAGCTTGGGAT 418
Query 420 GAAATTGTTGGACGCATTAAGTATATATTTTCTGATGAGTTTCTTTCAGCTGAGCATCCT 479
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 419 GAAATTGTTGGCCGCATTAAGTATATATTTTCTGATGAGTTTCTTTCAGCTGAGCACCCT 478
Query 480 CTGGGAGCTCACCTTAGAGCGGCATTGCGAAGAGATGGTGAACGTTGTGGATCAGTTCCC 539
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 CTGGGAGCTCACCTTAGAGCGGCATTGCGAAGAGATGGTGAACGTTGTGGATCAGTTCCT 538
Query 540 GTTTCTGTCATTGCTACAGTTGATGCAAAGATTAACAGTCGTTGTAAAATTATCAATCCT 599
|||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||
Sbjct 539 GTTTCTGTCATTGCTACATTTGATGCAAAGATTAACAGTCGTTGTAAAATTATCGATCCT 598
Query 600 TCTGTGGAGTCAGATCCTTTCTTGGCCATTTCCTATGTTATGAAGGCTGCTGCAAAGTTG 659
|||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct 599 TCTGTGGAATCAGATCCTTTCTTGGCCATTTCCTATGTCATGAAGGCTTCTGCAAAGTTG 658
Query 660 GCAGACTACATTGTTGCATCTCCGCATGGACTCCGAAGGAAAAATGCATACCCTTCAGAA 719
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 659 TCAGACTACATTGTTGCATCTCCGCATGCACTCCGAAGGAAAAATGCATACCCTTCAGAA 718
Query 720 ATCGTGGAAGCACTAGCTACTCATGTATCTGATTCCCTACATAGCAGAGAAGTCGCGGCT 779
|| || |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 719 ATTGTAGAAGCACTAGCTACTCATGTATCTGATTCCCTACATAGAAGAGAAGTCGCGGCT 778
Query 780 GTATATATACCATGTATCGATGAGGAAGTTGTTGAGTTAGATACTCTTTACATTTCATCA 839
|||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 779 GTATATATACCATGTATCGATGAGGAGGTTGTTGAGCTAGATACTCTTTACATTTCATCA 838
Query 840 AACCGGCATTACTTGGATAGTATTGCTGAAAGGCTCGGATTGAAAGATGGCAACCAAGTG 899
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 839 GACCGGCATTACTTGGATAGTATTGCTGAAAGGCTCGGATTGAAAGATGGCAGCCAAGTG 898
Query 900 ATGATAT-C--CAGGA-TGTTTGGCAAAGCTTCCTGTGGCTCTGAGTGTAGATTGTACTC 955
||||||| | ||||| | ||||| ||||| |||||||| ||||||||||||||||||||
Sbjct 899 ATGATATCCAGCAGGACT-TTTGGAAAAGCATCCTGTGGTTCTGAGTGTAGATTGTACTC 957
Query 956 TGAGATTCCAAAGAAGTACT-TGGATAATTCATCAGATGCCTCTGGTACTTCAAATGAAG 1014
||| ||||| ||||||| || | |||||||||||||| |||||||| | |||||||||||
Sbjct 958 TGATATTCCGAAGAAGTCCTCT-GATAATTCATCAGAAGCCTCTGGAAGTTCAAATGAAG 1016
Query 1015 ACTCATCTCATATTGTAAAATCTCGGAATGCACGAGCAAGTTACATTTGTGGTCAAGATA 1074
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1017 ACTCATCTCATATTAAAAAATCTCGGAATGCACGAGCAAGTTACATTTGTGGTCAAGATA 1076
Query 1075 TTCACGGGGATGCAATCTTGGCATCTGTTGGTTACCGATGGAAGTCCGATGATCTTGACT 1134
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1077 TTCACGGGGATGCAATCTTGGCATCTGTTGGTTACCGATGGAAGTCCGACGATCTTGACT 1136
Query 1135 ATGATGATGTAACCGTAAATTCATTTTACAGAATATGTTGCGGTATGTCACCCAATGGAA 1194
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1137 ATGATGATGTAACTGTAAATTCATTTTACAGAATATGTTGCGGTATGTCACCCAATGGAA 1196
Query 1195 TCTACAAAATTTCCCGACAAGCTGTAATTGCTGCACAGTTGCCTTTTGCATTCACTACAA 1254
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 1197 TCTACAAAATTTCCCGACAAGCAGTAATTGCTGCACAGTTGCCTTTTTCATTCACTACAA 1256
Query 1255 AATCTAATTGGAGAGGTCCACTCCCCAGGGAGATTCTCGGCCTGTTCTGCCACCAGCACC 1314
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1257 AATCTAATTGGAGAGGTCCACTCCCCAGGGAGATTCTCTGCCTGTTCTGCCACCAGCACC 1316
Query 1315 GACTAGCAGAACCCATCCTTTCTTCATCTACTGCACCTGTGAAATCGTTGTCCGACATAT 1374
||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1317 GACTAGCAGAACCCATCATTTCTTCATCTACTGCTCCTGTGAAATCGTTGTCTGACATAT 1376
Query 1375 TCAGATCTCACAAGAAGTTGAAGGTCTCAGGAGTTGATGATGCCAATGAGAATTTGAGTA 1434
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1377 TCAGATCTCAAAAGAAGTTGAAGGTCTCAGGAGTTGATGATGCCAATGAGAATTTGAGTA 1436
Query 1435 GGCAAAAAGAAGATACACCAGGACTAGGGCATGGGTTTAGATGTGAAGTGAAGATTTTTA 1494
|| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 1437 GGGAAAAAGAAGATACACCAGGACTAGGGCATGGGTTTAGATGTGAAGTGAAAATCTTTA 1496
Query 1495 CAAAGTCTCAGGATTTAGTTTTAGAATGTTCACCGAGAAAATTCTATGAGAAGGAAAATG 1554
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1497 CAAAGTCTCAGGATTTGGTTTTAGAATGTTCACCGAGAAAATTCTATGAGAAGGAAAATG 1556
Query 1555 ATGCCATTCAAAATGCTTCATTAA-AGGCCCTCTTATGGTTTAGTAAGTTTTTTGCTGAC 1613
|||||||||||||||||||||| | || ||||||||||||||||||||||||| ||||||
Sbjct 1557 ATGCCATTCAAAATGCTTCATTGAGAG-CCCTCTTATGGTTTAGTAAGTTTTTCGCTGAC 1615
Query 1614 CTGGATGTGGATGGAGAGCAATCATGTGATACAGATGACGACCAGGATACTAAATCTTC- 1672
||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| |
Sbjct 1616 CTGGATGTGGATGGAGAACAACCATGTGATACAGATGACGACCAGGATATTAAATCT-CG 1674
Query 1673 AAGTCCTAATGTTTTTGCGGCCCCACCGATTTTACAAAAGGAACACAGTTCTGAATCAAA 1732
|||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1675 AAGTCCTAATGTTTTTGCGGCCCCACCGATTTCCCAAAATGAACACAGTTCTGAATCAAA 1734
Query 1733 AAACACAAATGTGCTGTCGGCAGAGAAGCGTGTTCAATCTATAACAAATGGTTCCGTGGT 1792
|| ||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1735 AACCACGAATGTGCTATCGGCAGAGAAGCGTGTTCAATCTATAACAAACGGTTCCGTGGT 1794
Query 1793 TAGCATATGCTATTCTTTGTCTTTGGCAGTGGATCCTGAATATTCGAGTGATGGTGAATC 1852
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 1795 TAGCATATGCTATTCTTTGTCTTTGGCAGTGGATTCTGAAGATTCGAGTGATGGTGAATC 1854
Query 1853 TCCAAGAGAAGACAATGAAAGCAATGAAGAGATGGAGTCTGA-----AT----A-T-T-C 1900
|||||||||||||| ||||||||||||||| ||||||||||| || | | | |
Sbjct 1855 TCCAAGAGAAGACATTGAAAGCAATGAAGATATGGAGTCTGAGGTGGATGCTGAATATTC 1914
Query 1901 GGCTAATTGTGAATCCTCAGTAGAGCTCATTGAAAGCAATGAAGAGATAGAGTTTGAGGT 1960
||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 1915 GGCTAATTGTGAACCCTCAATAGATCTCATTGAAAGCAATGAAGAGATAGAGTTTGAGGT 1974
Query 1961 AGGGACTGGATCCATGAATCCACATATTGAATCAGAAGTTACTCAGATGACTGTGGGTGA 2020
||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1975 AGGAACTGGATCCATGAATCCACATATTGAATCAGCTGTTACTCAGATGACTGTGGGTGA 2034
Query 2021 ATATGCTTCATTTAGGATGACACCCCCTGATGCTGCTGAAGCTTTGATTTTGGCTGTTGG 2080
|||| |||| ||||| || || |||||||||||||||||||||||||||||||||||||
Sbjct 2035 ATATTCTTCTTTTAGTATTACCCCCCCTGATGCTGCTGAAGCTTTGATTTTGGCTGTTGC 2094
Query 2081 TTCTGATACTGTGAGAATCCGCTCGCTCCTATCAGAACGTCCATGTTTAAATTACAATAT 2140
||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||| |||
Sbjct 2095 TTCTGATACTGTGAGAACCCGCTCGCTTCTATCAGAACGTCCAAGTTTAAATTACAGTAT 2154
Query 2141 ACTTTTGTTGGGAGTGAAAGGGCCATCAGAAGAACGAATGGAGGCGGCTTTTTTCAAACC 2200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2155 ACTTTTGTTGGGAGTGAAAGGGCCATCAGAAGAACGAATGGAGGCGGCTTTTTTCAAACC 2214
Query 2201 TCCACTTTCAAAACAACGTGTTGAATATGCACTGAAACATATAAGAGAATCATCCGCTTC 2260
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2215 TCCACTTTCTAAACAGCGTGTTGAATATGCACTGAAACATATAAGAGAATCATCCGCTTC 2274
Query 2261 TACTTTGGTTGACTTTGGATGCGGATCTGGAAGTTTATTAGACTCTCTACTTGACTATCC 2320
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2275 TACCTTGGTTGACTTTGGATGCGGATCTGGAAGTTTATTAGACTCTCTACTTGACTATCC 2334
Query 2321 AACTTCACTTCAAACCATCATCGGTGTTGACATTTCGCCAAAGGGTCTTGCCCGTGCTGC 2380
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2335 AACTTCACTTCAAACCATCATCGGTGTTGACATTTCGCCGAAGGGTCTTGCCCGTGCTGC 2394
Query 2381 TAAGATGCTACATGTAAAACTAAACAAGGAAGCTTGCAACGTCAAATCTGCTACACTTTA 2440
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2395 TAAGATGCTACATATAAAACTAAACAAGGAAGCTTGCAACGTCAAATCTGCTACACTTTA 2454
Query 2441 TGATGGTTCCATCCTTGAGTTTGACTCCAGGCTGCATGACGTTGACATCGGCACTTGCTT 2500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2455 TGATGGTTCCATCCTTGAGTTTGACTCCAGGCTGCATGACGTTGACATCGGCACTTGCTT 2514
Query 2501 AGAGGTTATTGAACACATGGAAGAAGATCAAGCCTGTGAATTTGGGGAAAAAGTTCTGAG 2560
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 2515 AGAGGTTATTGAACACATGGAAGAAGATCAAGCCTGTGAATTCGGGGAAAAAGTTCTTAG 2574
Query 2561 CTTGTTCCACCCCAAGCTCCTGATTGTCTCAACACCAAACTACGAGTTCAACACAATTCT 2620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2575 CTTGTTCCACCCCAAGCTCCTGATTGTCTCAACACCAAACTACGAGTTCAACACAATTCT 2634
Query 2621 CCAGCGGTCTACACCAGAAACCCAAGAAGAAAACAACTC-GGAGCCACAGCTTCCAAAGT 2679
||| || |||||| ||||||| ||||||||||||||||| || | ||||||||||||| |
Sbjct 2635 CCAACGTTCTACATCAGAAACACAAGAAGAAAACAACTCCGG-GTCACAGCTTCCAAAAT 2693
Query 2680 TCAGGAACCATGACCACAAATTCGAGTGGACAAGAGAACAGTTCAATCAA-TGGGCATCA 2738
|||||||||||||||||||||| || ||||||||||||||||| || ||| ||||| ||
Sbjct 2694 TCAGGAACCATGACCACAAATTTGAATGGACAAGAGAACAGTTTAA-CAACTGGGCCTCT 2752
Query 2739 AAGCTCGGCAAACGCCATAACTACAGCGTCGAGTTTAGCGGTGTTGGTGGGTCTGGTGAA 2798
|| |||| |||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 2753 AATCTCGCCAAACGCCATAACTACGGTGTCGAGTTTAGCGGTGTTGGTGGGTCTGGTGAA 2812
Query 2799 GTAGAACCCGGATTTGCTTCTCAGATAGCTATTTTTAGACGGGAAGCTTCATCTGTTGAG 2858
||||||||||| |||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 2813 GTAGAACCCGGGTTTGCTTCTCAGATAGCTGTTTTTAAACGGGAAGCTTCATCTGTTGAG 2872
Query 2859 AATGTTGCAGAAAGCTCAATGCAGCCTTATAAAGTCATCTGGGAGTGGAAGAAAGAAGAT 2918
||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||| |
Sbjct 2873 AATGTTGCAGAAAGCTCAATGCAGCGTTATAAAGTCATATGGGAATGGAAGAAAGATG-- 2930
Query 2919 GTAGAAAAGAAAAAGACTGA 2938
| ||| || |||| ||||||
Sbjct 2931 G-AGATAA-AAAA-GACTGA 2947
> Ahg890100 jgi|Araly1|890100|Al_scaffold_0007_2086
Length=2565
Score = 649 bits (351), Expect = 0.0
Identities = 723/894 (81%), Gaps = 59/894 (7%)
Strand=Plus/Plus
Query 260 ATGTCTCTATCGTTGCCACTTGCAGCTACCTGAATTTTCTGTTGTGTCAAATGTCTTCAA 319
||| |||||||||||||||||||||||||| |||||||||||||| |||||||| |||||
Sbjct 108 ATGCCTCTATCGTTGCCACTTGCAGCTACCAGAATTTTCTGTTGTATCAAATGTTTTCAA 167
Query 320 GAAG-AAGAAGGATTCTGAACAATCTGCTGCTGAATTGGCTCTTGACAAGCTAGGCATTC 378
| || ||||||||||| |||||||| ||||| ||||||||||| || |||||||| ||||
Sbjct 168 G-AGAAAGAAGGATTCCGAACAATCCGCTGCAGAATTGGCTCTCGAGAAGCTAGGAATTC 226
Query 379 -GCCCTC---A-GA--ATGATGAT-CT-T-ACTGTGGATGAAGCTAGGGATGAAATTGTT 428
| |||| | || |||||||| | | ||||||||||||||| || |||| || |||
Sbjct 227 AG-CCTCAGGATGATGATGATGATGATATAACTGTGGATGAAGCTTGGAATGATATCGTT 285
Query 429 GGACGCATTAAGTATATATTTTCTGATGAGTTTCTTTCAGCTGAGCATCCTCTGGGAGCT 488
| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| |
Sbjct 286 GAACGCATTAAGTATATATTTTCTGATGAGTTCCTTTCAGCTGATCATCCTCTGGGAGGT 345
Query 489 CACCTTAGAGCGGCATTGCGAAGAGATGGTGAACGTTGTGGATCAGTTCCCGTTTCTGTC 548
|| ||||| |||||||||| ||| |||||||||||||| |||||| |||| |||||||||
Sbjct 346 CATCTTAGGGCGGCATTGCAAAGGGATGGTGAACGTTGCGGATCACTTCCTGTTTCTGTC 405
Query 549 ATTGCTACAGTTGATGCAAAGATTAACAGTCGTTGTAAAATTATCAATCCTTCTGTGGAG 608
||||| ||| |||||||||||||||||||||| |||||| | || |||||||||||||
Sbjct 406 ATTGCGACATTTGATGCAAAGATTAACAGTCGCTGTAAAGTGATTGATCCTTCTGTGGAC 465
Query 609 TCAGATCCTTTCTTGGC-CATTTCCTATGTTATGAAGGCTGCTGCAAAGTTGGCAGACTA 667
||||||||| ||||| | ||| |||||||| ||||||||||| ||||||||| | |||||
Sbjct 466 TCAGATCCTATCTTG-CTCATGTCCTATGTCATGAAGGCTGCAGCAAAGTTGCCGGACTA 524
Query 668 CATTGTTGCATCTCCGCATG--GACTC-C---GAAGGAAAAATGCATACCCTTCAGAAAT 721
|||||| | |||||||||| || || | |||||||||| |||||||| ||| |||
Sbjct 525 CATTGTCGTGTCTCCGCATGTAGATTCACTACGAAGGAAAAAACCATACCCTCCAGCAAT 584
Query 722 CGTGGAAGCACTAGCTACTCATGTATCTGATTCCCTACATAGCAGAGAAGTCGCGGCTGT 781
| |||| || ||||||||||| || | | |||| | |||| | ||||||
Sbjct 585 TATAAAAGCTCTGGCTACTCATGT----GA------A-A-AGCATAAAAGTTGAGGCTGT 632
Query 782 ATATATACCATGTA-T-----CGATGAGGAAGTTGTTGAGTTAGAT-ACTCTTTACATTT 834
|||||| ||||| | || ||| ||||||||| || || | |||||| | ||||
Sbjct 633 GCATATACAATGTACTGTTGGCGGTGAAGAAGTTGTTAAGCCAG-TCACTCTTGATATTT 691
Query 835 CATCAAACCGGCATTACTTGGATAGTATTGCTGAAAGGCTCGGATTGAAAGATGGCAACC 894
||||| ||| |||||||||||| ||||||||||| ||| || ||||| ||||||| ||
Sbjct 692 CATCAGGTCGGTATTACTTGGATATTATTGCTGAAAAGCTTGGGTTGAAGGATGGCAGCC 751
Query 895 AAGTGATGATATCCAGGA-TGTTTGGCAAAGCTTCCTGTGGCTCTGAGTGTAGATTGTAC 953
||||||||||||| |||| | || |||||| |||||| ||||| |||||||||| | |||
Sbjct 752 AAGTGATGATATCAAGGACTATT-GGCAAAACTTCCTCTGGCTATGAGTGTAGAGTATAC 810
Query 954 TCTGAGATTCCAAAG---AAGTACTTG-GATAATTCATC-AGATGCCTC-TGGTA--CTT 1005
||| || || ||| |||| ||| |||||||||| | | ||| | || | | |
Sbjct 811 GCTGCCATGCCTAAGTTGAAGT-CTTTCGATAATTCATGGAAA-GCC-CGTGAAAAACGT 867
Query 1006 CAAATGAA-GACTCATCTCATATTGTAAAA-TCTCGGAATGCACGAGCAAGTTACATTTG 1063
| ||| || || ||||| ||| ||| |||| |||||||||||| |||||||| ||||
Sbjct 868 CCAATTAATGAATCATCACATCTTG-AAAAGTCTCGGAATGCAAAAGCAAGTTTTGTTTG 926
Query 1064 TGGTCAAGATATTCACGGGGATGCAATCT-TGGCATCTGTTGGTTACCGATGGA 1116
||||| ||| ||||||| ||||| || | |||||||||||||||||| |||||
Sbjct 927 TGGTCTTGATGTTCACGGTGATGCGAT-TGTGGCATCTGTTGGTTACCCATGGA 979
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 118041669255
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5