BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G20980.1
Length=2126
Score E
Sequences producing significant alignments: (Bits) Value
Ahg492789 jgi|Araly1|492789|fgenesh2_kg.7__2222__AT4G20980.1 3365 0.0
Ahg948689 jgi|Araly1|948689|scaffold_800576.1 1740 0.0
> Ahg492789 jgi|Araly1|492789|fgenesh2_kg.7__2222__AT4G20980.1
Length=2030
Score = 3365 bits (1822), Expect = 0.0
Identities = 1967/2036 (97%), Gaps = 13/2036 (1%)
Strand=Plus/Plus
Query 13 AGAATTAGGGTTTCCGC-TTT-CCACACACAC--AGCTGCAACACTATCTTCTCAGAAAT 68
||||||||||||||||| ||| |||||||||| ||||||||||||||||||||| ||||
Sbjct 1 AGAATTAGGGTTTCCGCTTTTCCCACACACACAGAGCTGCAACACTATCTTCTCAAAAAT 60
Query 69 GGTAACCGAAGCTTTCGAATTCGTCGCCGTTCCTTTCAATTCCGATGGCTGGGGACCTCC 128
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 61 GGTAGCCGAAGCTTTCGAATTCGTCGCCGTTCCTTTCAATTCCGATGGCTGGGGTCCTCC 120
Query 129 AGACGCTTCCGACGTTTCCTCCTCCGCCT-CTCCCACCAGCGTCGCCGCCGCTAATCTTC 187
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 121 AGACGCTTCCGACGTTTCCTCCTCCGCCTCCT-CCACCAGCGTCGCCGCCGCTAATCTTC 179
Query 188 TCCCGAACGTTCCTTTCGCTTCCTTCTCCCGTTCCGATAAGCTCGGCCGTGTAGCTGATT 247
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 TCCCAAACGTTCCTTTCGCTTCCTTCTCCCGTTCCGATAAGCTCGGCCGTGTAGCTGATT 239
Query 248 GGACTCGCAATCTCTCTAATCCATCCGCTCGTCCTAACACCGGATCCAAATCAGATCCGT 307
|||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct 240 GGACTCGCAATCTCTCTAATCCCTCCGCTCGTCCTCCCACCGGATCCAAATCAGATCCGT 299
Query 308 CTGCAGTTTTCGATTTCTCCGCTTTCGCAATCGACGAAGGCTTCGGTCTCGCTTCCTCCG 367
|||||||||||||||||||||||||||| ||||||||||| || |||||| |||||||||
Sbjct 300 CTGCAGTTTTCGATTTCTCCGCTTTCGCTATCGACGAAGGATTTGGTCTCACTTCCTCCG 359
Query 368 GTGGTAATCCCGACGAAGACGCAGCTTTCCGTCTCGTCGACGGTAAACCTCCGCCGCGTC 427
|||| |||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 360 GTGGAAATCCCGATGAGGACGCAGCTTTCCGTCTCGTCGACGGTAAACCTCCGCCGCGTC 419
Query 428 CTAAATTCGGACCTAAATGGCGTTTCAATCCTCACCACAATCGGAATCAGCTTCCTCAAC 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 CTAAATTCGGACCTAAATGGCGTTTCAATCCTCACCACAATCGGAATCAGCTTCCTCAAC 479
Query 488 GGCGAGATGAAGAAGTTGAAGCTAAGAAGCGTGATGCTGAGAAGGAACGAGCTCGTCGTG 547
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 480 GGCGAGATGAAGAAGTCGAAGCTAAGAAGCGTGACGCTGAGAAGGAACGAGCTCGTCGTG 539
Query 548 ATCGTCTCTACAATAACAACCGTAACAACATCCATCACCAACGCCGTGAAGCTGCCGCTT 607
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 540 ATCGTCTCTACAATAACAACCGTAACAACATCCATCACCAGCGCCGTGAAGCCGCCGCTT 599
Query 608 TCAAATCATCCGTTGATATTCAGCCGGAGTGGAACATGCTTGAGCAGATCCCTTTCTCAA 667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 600 TCAAATCATCCGTTGATATTCAGCCGGAGTGGAACATGCTTGAGCAGATCCCTTTCTCAA 659
Query 668 CATTCTCGAAGCTCTCGTACACAGTTCAAGAACCAGAAGATCTTCTTCTCTGTGGTGGCC 727
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct 660 CATTCTCGAAGCTCTCGTTCACAGTTCAAGAACCAGAAGATCTACTTCTCTGTGGTGGCC 719
Query 728 TTGAGTACTACAACCGCCTTTTCGATCGCATAACGCCGAAAAACGAACGCAGACTCGAGC 787
||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||||
Sbjct 720 TTGAGTACTACAACCGCGTTTTCGATCGCACAACGCCTAAAAACGAACGCAGACTCGAGC 779
Query 788 GTTTCAAGAACAGGAACTTCTTCAAAGTCACTACTAGTGATGATCCTGTGATTAGGCGTT 847
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 780 GTTTCAAGAACAGGAACTTCTTCAAAGTCACTACGAGTGATGATCCTGTGATTAGGCGTT 839
Query 848 TAGCTAAGGAAGACAAAGCTACTGTTTTCGCTACTGATGCTATATTAGCTGCTCTTATGT 907
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 840 TAGCTAAGGAAGACAAAGCTACTGTTTTCGCAACTGATGCTATATTAGCTGCTCTTATGT 899
Query 908 GTGCTCCTAGATCTGTTTACTCTTGGGATATTGTTATTCAACGTGTTGGTAACAAACTGT 967
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 900 GTGCTCCTCGATCTGTTTACTCTTGGGATATTGTTATTCAACGTGTTGGTAACAAACTGT 959
Query 968 TCTTTGACAAGAGAGATGGATCACAGCTTGATTTGTTGTCTGTGCATGAGACATCTCAAG 1027
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 960 TCTTTGACAAGAGAGATGGATCACAGCTTGATTTGCTGTCTGTGCATGAGACATCTCAAG 1019
Query 1028 AGCCATTGCCTGAGTCTAAAGATGATATCAATTCTGCTCATTCTCTAGGTGTGGAAGCTG 1087
|||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||
Sbjct 1020 AGCCATTGCCTGAGGCTAAAGATGATATCAATTCTGCTTACTCTCTAGGTGTGGAAGCTG 1079
Query 1088 CTTACATCAATCAGAACTTTTCGCAGCAGGTTTTGGTTAGAGATGGAAAGAAGGAAACTT 1147
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1080 CTTATATCAATCAGAACTTTTCGCAGCAGGTTTTGGTTAGAGATGGAAAGAAGGAAACTT 1139
Query 1148 TTGATGAAGCCAATCCATTTGCTAATGAAGGTGAAGAGATTGCTTCTGTTGCTTATAGGT 1207
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 TTGATGAGGCGAATCCATTTGCTAATGAAGGTGAAGAGATTGCTTCTGTTGCTTATAGGT 1199
Query 1208 ATAGAAGGTGGAAGCTTGATGATAATATGCATCTTGTTGCGAGGTGTGAGTTACAGAGTG 1267
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1200 ATAGAAGGTGGAAGCTTGATGAGAATATGCATCTTGTTGCGAGGTGTGAGTTACAGAGTG 1259
Query 1268 TTGCTGATCTCAACAACCAAAGGTCGTTTCTTACTTTGAATGCTCTTAACGAGTTTGATC 1327
||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 1260 TTGCTGATCTCAATAACCAGAGGTCGTTCCTTACTTTGAATGCTCTTAACGAGTTTGATC 1319
Query 1328 CTAAGTACTCTGGTGTTGATTGGAGACAGAAGCTTGAAACTCAGAGAGGTGCGGTTTTAG 1387
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1320 CTAAGTACTCTGGTGTTGATTGGAGGCAGAAGCTTGAAACTCAGAGAGGTGCGGTTTTGG 1379
Query 1388 CTACAGAATTGAAGAACAATGGAAATAAGTTGGCTAAATGGACTGCACAAGCTTTATTGG 1447
|||| ||||||||||||||||| || ||||||||||||||||||||||||||| | ||||
Sbjct 1380 CTACCGAATTGAAGAACAATGGGAACAAGTTGGCTAAATGGACTGCACAAGCTCTCTTGG 1439
Query 1448 CTAATGCTGATATGATGAAGATTGGTTTTGTCTCTAGGGTTCATCCTCGTGATCATTTCA 1507
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1440 CTAATGCTGATATGATGAAGATTGGCTTTGTCTCTAGGGTTCATCCTCGTGATCATTTCA 1499
Query 1508 ACCATGTTATATTATCTGTTTTGGGGTATAAGCCGAAGGATTTCGCTGGACAGATTAATC 1567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1500 ACCATGTTATATTATCTGTTTTGGGGTATAAGCCGAAGGATTTCGCTGGACAGATTAATC 1559
Query 1568 TCAACACTTCTAACATGTGGGGGATTGTGAAATCCATAGTTGATCTGTGTATGAAACTAA 1627
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1560 TCAACACTTCTAACATGTGGGGAATTGTGAAATCCATAGTTGATCTGTGTATGAAACTTA 1619
Query 1628 GCGAAGGGAAGTATGTTCTTGTGAAGGATCCATCGAAGCCTCAAGTGAGGATTTATGAGG 1687
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1620 GCGAAGGGAAATATGTTCTTGTGAAGGATCCATCGAAGCCTCAAGTGAGGATTTACGAGG 1679
Query 1688 TTCCACCTGATGC-TTTCGAGAATGATTACGTTGAGGAACCGTTGCCTGAAGATGAACAG 1746
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1680 TTCCACCTGATGCGTTT-GAGAATGATTACGTTGAGGAACCGTTGCCTGAAGATGAACAG 1738
Query 1747 GTTCAGCCAACTGAGGAAAACACAGAGGGAGCAGAAGCAAGTGTAGCTGCAACTAAAGAA 1806
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 1739 GTTCAGCCAACTGAGGAAAACGCAGAGGGAGCAGAAGCAAGTGTAGCTGCAGCTAAAGAA 1798
Query 1807 ACCGAGGAGAAGAAAGCTGATGATGCTCAAGCTTGATGGTTATAAAGTCAGGTCCAAAGT 1866
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1799 ACCGAGGATAAGAAAGCTGATGAAGCTCAAGCTTGATGGTTATAAAGTCAGGTCCAAAGT 1858
Query 1867 CTACACCTTTCGTTTCTGGGTTCTTTT-GAGAGTTGAAGCTTCAATCAAACAACAACAAT 1925
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1859 CTACACCTTTCGTTTCTGGGTTCTTTTTGAGAGTTGAAGCTTCAATCAAACAACAACAAT 1918
Query 1926 GGAGGTTCCTTTTTTAATTATCTTGTCCTTTTTCAAATTTTTGTGGTACTGCTGTAATTT 1985
||||||| ||||||| ||||||||||||||| ||| |||||||||||||||||||||||
Sbjct 1919 GGAGGTT--TTTTTTA-TTATCTTGTCCTTTTCCAA-TTTTTGTGGTACTGCTGTAATTT 1974
Query 1986 TAAGTCAGAAATGAGATTGTAGAACACTATCTTCGTGACATCTTTTGGAAAATCAT 2041
| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1975 TGAGTCAGAAATGAGATTTTAGAACACTATCTTCGTGACATCTTTTGGAAAATCAT 2030
> Ahg948689 jgi|Araly1|948689|scaffold_800576.1
Length=1815
Score = 1740 bits (942), Expect = 0.0
Identities = 1477/1730 (85%), Gaps = 58/1730 (3%)
Strand=Plus/Plus
Query 75 CGAAGCTTTCGAATTCGTCGCCGTTCCTTTCAATTCCGATGGCTGGGGACCTCCAGACGC 134
|||||| |||||| | | | | || || |||||||||||||| |||||||||||||| ||
Sbjct 37 CGAAGCATTCGAAGTAGGCACAGTCCCATTCAATTCCGATGGTTGGGGACCTCCAGATGC 96
Query 135 TTCCGACGTTTCCTCCTCCGCCTCTCCCACCAGCGTCGCCGCCGCTAATCTTCTCCCGAA 194
||||||| || | | || ||||||||||||| || || ||||| ||||| ||
Sbjct 97 TTCCGAC----ACT--T----C-CT-CCACCAGCGTCGCGGCGGCGAATCTCCTCCCAAA 144
Query 195 CGTTCCTTTCGCTTCCTTCTCCCGTTCCGATAAGCTCGGCCGTGTAGCTGATTGGACTCG 254
||| ||||||||||||||||| ||||| || || ||||| || || ||||||||||| ||
Sbjct 145 CGTCCCTTTCGCTTCCTTCTCACGTTCTGAAAAACTCGGACGCGTCGCTGATTGGACACG 204
Query 255 CA-ATCTCTCTAATCCATCCGCTCGTCCTAACACCGGATCCAAATCAGATCCGTCTGCAG 313
| |||||| |||||||| ||||||||| |||||||||||||||||||||| || |||
Sbjct 205 -AGCTCTCTCAAATCCATCAGCTCGTCCTCACACCGGATCCAAATCAGATCCATCAGCAA 263
Query 314 TTTTCGATTTCTCCGCTTTCGCAATCGACGAAGGCTTCGGTCTCGCTTCCTCCGGTGGTA 373
| ||||||||||| ||||| ||| | || ||||| || ||||| || |||||||| |
Sbjct 264 TCTTCGATTTCTCAGCTTTTGCAGTAGATGAAGGATTTGGTCTAACTAATTCCGGTGG-A 322
Query 374 ATC-CCGACGAAGACGCAGCTTTCCG-TCTCGTCGACGGTAAACCTCCGCCGCGTCCTAA 431
| | |||||||||||||||||||||| | | |||||||||||||| ||||||||||||||
Sbjct 323 AACGCCGACGAAGACGCAGCTTTCCGAT-TAGTCGACGGTAAACCACCGCCGCGTCCTAA 381
Query 432 ATTCGGACCTAAATGGCG-TTTCAATC-CTCACCACAATCGGAATCAGCTTCCTCAACGG 489
|||||||||||||||| | ||| |||| | |||| || || |||||||||||||||||
Sbjct 382 ATTCGGACCTAAATGGAGATTT-AATCAAT-ACCATAACCGTAATCAGCTTCCTCAACGT 439
Query 490 CGAGATGAAGAAGTTGAAGCTAAGAAGCGTGATGCTGAGAAGGAACGAGCTCGTCGTGAT 549
|| ||||||||||||||||||||||| ||||| |||||||| || |||||||||||||||
Sbjct 440 CGTGATGAAGAAGTTGAAGCTAAGAAACGTGAAGCTGAGAAAGATCGAGCTCGTCGTGAT 499
Query 550 CGTCTCTACAATAACAACCGTAACAACATCCATCACCAACGCCGTGAAGCTGCCGC-TTT 608
||||| || ||||| ||||||||||| || ||||| ||||| |||||||| || || |||
Sbjct 500 CGTCTTTATAATAATAACCGTAACAATATTCATCAGCAACGTCGTGAAGCCGCGGCGTTT 559
Query 609 CAAATCATCCGTTGATATTCAGCCGGAGTGGAACATGCTTGAGCAGATCCCTTTCTCAAC 668
|||||||| ||||||||||| ||||| ||||| |||||||||||||| ||||| || ||
Sbjct 560 -AAATCATCAGTTGATATTCAACCGGAATGGAATATGCTTGAGCAGATTCCTTTTTCGAC 618
Query 669 ATTCTCGAAGCTCTCGTACACAGTTCAAGAACCAGAAGATCTTCTTCTCTGTGGTGGCCT 728
||||||||||| |||| |||||||||||||| |||||||||||||| |||||||| ||
Sbjct 619 TTTCTCGAAGCTTTCGTTTACAGTTCAAGAACCTGAAGATCTTCTTCTTTGTGGTGGACT 678
Query 729 TGAGTAC-TA-CAACCGCCTTTTCGATCGCATAACGCCGAAAAAC-GAACGCAGACTCGA 785
||||| | || | | | || | ||||| || || || ||| | || || ||||| ||
Sbjct 679 TGAGT-CTTATGATCGGAGTTAT-GATCGTATTACACC-TAAAGCTGATCGTAGACTTGA 735
Query 786 GCGTTTCAAGAACAGGAACTTCTTCAAAGTCACTACTAGTGATGATCCTGTGATTAGGCG 845
||||||||||||||||| | | || || || ||||| |||||||||| ||||||||| ||
Sbjct 736 GCGTTTCAAGAACAGGAGC-T-TT-AAGGTTACTACAAGTGATGATCTTGTGATTAGACG 792
Query 846 TTTAGCTAAGGAAGACAAAGCTACTGTTTTCGCTACTGATGCTA-TATTAGCTGCTCTTA 904
| | ||||||||||| |||||||||||||| ||||||||||||| | || ||||||||||
Sbjct 793 TCTCGCTAAGGAAGATAAAGCTACTGTTTTTGCTACTGATGCTATTCTT-GCTGCTCTTA 851
Query 905 TGTGTGCTCCTAGATCTGTTTACTCTTGGGATATTGTTATTCAACGTGTTGGTAACAAAC 964
|||||||||||||||| ||||| || |||||| |||| |||||||||||||| || || |
Sbjct 852 TGTGTGCTCCTAGATCGGTTTATTCATGGGATCTTGTGATTCAACGTGTTGGGAATAAGC 911
Query 965 TGTTCTTTGACAAGAGAGATGGATCACAGCTTGATTTGTTGTCTGTGCATGAGACATCTC 1024
| |||||||| ||||||||||| || | ||| |||||||||||||| ||||| || ||||
Sbjct 912 TTTTCTTTGATAAGAGAGATGGGTCGCCGCTAGATTTGTTGTCTGTTCATGAAACGTCTC 971
Query 1025 AAGAGCCATTGCCTG-AGTCTAAAGATGATATCAATTCTGCTCATTCTCTAGGTGTGGAA 1083
||||||| ||||||| || ||||||||||||| || |||||||||||||||||||||||
Sbjct 972 AAGAGCCTTTGCCTGAAG-CTAAAGATGATATTAACTCTGCTCATTCTCTAGGTGTGGAG 1030
Query 1084 GCTGCTTACATCAATCAGAACTTTT-CGCAGCAGGTTTTGGTTA-GAGATGGAAAGAA-G 1140
|||||||| || |||||||| |||| | |||||||||||||||| || ||||||| || |
Sbjct 1031 GCTGCTTATATTAATCAGAA-TTTTGCTCAGCAGGTTTTGGTTAGGA-ATGGAAA-AAGG 1087
Query 1141 GAAACTTTTGATGAAGCC-AATCC-ATTTGCTAATGAAGGTGAAGAGATTGCTTCTGTTG 1198
| ||||||||||| |||| | ||| | || ||||||||||||||||| ||||||| |||
Sbjct 1088 GTAACTTTTGATG-AGCCGATTCCGA-ATGTTAATGAAGGTGAAGAGAATGCTTCTATTG 1145
Query 1199 CTTATAGGTATAGAAGGTGGAAGCTTGATGATAATATGCATCTTGTTGCGAGGTGTGAGT 1258
||||||||||||| || |||||||||||||||| |||| |||| ||||| ||||||||||
Sbjct 1146 CTTATAGGTATAGGAGATGGAAGCTTGATGATAGTATGTATCTAGTTGCTAGGTGTGAGT 1205
Query 1259 TACAGAGTGTTGCTGATCTCAACAACCAAAGGTCGTTTCTT-ACTTTGAATGCTCTTAAC 1317
||||||| || |||| | || ||||| || || ||||| ||||||||||||||||||
Sbjct 1206 TACAGAGCACTGTTGATTTGAATAACCAGAGATC-ATTCTTAACTTTGAATGCTCTTAAC 1264
Query 1318 GAGTTTGATCCTAAGTACTCTGGTGTTGATTGGAGACAGAAGCTTGAAACTCAGAGAGGT 1377
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 1265 GAGTTTGATCCTAAGTACTCTGGTGTTGATTGGAGACAGAAGCTCGAGACTCAGAGAGGT 1324
Query 1378 GCGGTTTTAGCTACA-GAATTGAAGAACAATGGAAATAAGTTGGCTAAATGGACTGCACA 1436
||||||||||||| | || |||||||||||||| |||||||| ||||||||||| |||||
Sbjct 1325 GCGGTTTTAGCTA-ATGAGTTGAAGAACAATGGTAATAAGTTAGCTAAATGGACCGCACA 1383
Query 1437 AGCTTTATTGGCTAATGCTGATATGATGAAGATTGGTTTTGTCTCTAGGGTTCATCCTCG 1496
|| | ||||||||||| ||||||||||||||||| ||||| || ||||||||||||||
Sbjct 1384 GGCCCTCTTGGCTAATGCGGATATGATGAAGATTGGGTTTGTTTCGAGGGTTCATCCTCG 1443
Query 1497 TGATCATTTCAACCATGTTATATTATCTGTTTTGGGGTATAAGCCGAAGGATTTCGCTGG 1556
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1444 TGATCATTTTAACCATGTTATATTATCGGTTTTGGGGTATAAGCCGAAGGATTTCGCTGG 1503
Query 1557 ACAGATTAATCTCAACACTT-CTAACATGTGGGGGATTGTGAAATCCATAGTTGATCTGT 1615
||||||||||| |||||| | ||||||||||| |||||||| || || ||||||||||
Sbjct 1504 GCAGATTAATCTGAACACTAAC-AACATGTGGGGAATTGTGAAGTCGATTGTTGATCTGT 1562
Query 1616 GTATGAAACTAAGCGAAGGGAAGTATGTTCTTGTGAAGGATCCATCGAAGCCTCAAGTGA 1675
||||||| |||| ||||| ||||||||||| |||||||||||||||||||||||||| |
Sbjct 1563 GTATGAAGTTAAGTGAAGGAAAGTATGTTCTAGTGAAGGATCCATCGAAGCCTCAAGTTA 1622
Query 1676 GGATTTATGAGGTTCCACCTGATGCTTTCGAGAATGATTACGTTGAGGAACCGT-TGCCT 1734
||||||| || |||||| |||||||||| || |||||||| || ||||| || | | |||
Sbjct 1623 GGATTTACGAAGTTCCAGCTGATGCTTTTGACAATGATTATGTGGAGGAGCC-TCTCCCT 1681
Query 1735 GAAGATGAACAGGTTCAGCCAACTGAGGAAAACACAGA-G--GGAGCAGA 1781
|| |||||||||||||||||| ||||||| ||||| || | ||||||||
Sbjct 1682 GAGGATGAACAGGTTCAGCCACCTGAGGAGAACACTGATGCAGGAGCAGA 1731
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79989514500
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5