BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G21670.1
Length=3774
Score E
Sequences producing significant alignments: (Bits) Value
Ahg492708 jgi|Araly1|492708|fgenesh2_kg.7__2141__AT4G21670.1 5334 0.0
Ahg492707 jgi|Araly1|492707|fgenesh2_kg.7__2140__AT4G21680.1 60.2 1e-07
> Ahg492708 jgi|Araly1|492708|fgenesh2_kg.7__2141__AT4G21670.1
Length=3654
Score = 5334 bits (2888), Expect = 0.0
Identities = 3407/3646 (93%), Gaps = 81/3646 (2%)
Strand=Plus/Plus
Query 1 AGAACGCCACAAAACCTAATAAACTTTTCCCAGATACACAAACAAACTCATCATCAACCA 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||
Sbjct 1 AGAACGCCACAAAACCTAATAAACTTTTCCCAGATACACAAACAAA---ATCATC-ATCA 56
Query 61 AGGAAGAAGAAAGAAACTAGGGtttttttttGTGGATTCATCATCGGTATTTTACAGATC 120
| | |||| ||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 57 A-G--GAAG-AAG-AACTAGGG--GTTTTTTGTGGATTCATCATCGGTATTTTACAGATC 109
Query 121 TATATTCAAAGGGAACAAAATCTTAAGGAACAAACACTAAATTTTCATTCTTTCTCTTAT 180
|||||||||||||||||||||| ||| |||||||||||||||| |||||||||||||||
Sbjct 110 TATATTCAAAGGGAACAAAATC-TAAAGAACAAACACTAAATTCTCATTCTTTCTCTTA- 167
Query 181 TTACCCATTTATCAAAAATCTTCCTTTTGTTTTCCTGATTCTTGCTAAAGaaaaaaaCTC 240
||| | | ||||||| ||||||||||| ||||||||||||||| |||||||||
Sbjct 168 TTA--C------C--AAATCTT-CTTTTGTTTTCTTGATTCTTGCTAAAG-AAAAAACTC 215
Query 241 GGATCCAATTCATAAACTAGTGTGGACTGGTGATCAATCTATCAATTCTGGCCAAGGGAC 300
|||||||||||| |||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 216 GGATCCAATTCAAAAACTAGTGTGGACTGGTGATCAATCTATCAAATCAGGCCAAGGGAC 275
Query 301 AACAAAAAGTTTAGATTTTGATGAACCAATTTTGAGATGAGACAATAGACATCCATTGAT 360
|| |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 276 AAGAAAAAGTTAAGATTTTGATGAACCAA-TTTGAGATGAGACATTAGACATCCATTGAT 334
Query 361 CTGTAAACTTTAAGAAGGAGAAGGAGAAAAGAAAGTATGTATAGTAATAATAGAGTAGAA 420
||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct 335 CTGTAAACTTT----------A--AGAAAAGAAAGTATGTATAGTAATAATAGAGTAGAA 382
Query 421 GTGTTTCATGGTGATGGAAGACTTGGAGAATTGGAGATATACCCTTCAAGGGAATTG-A- 478
||||||||||| ||||||||| |||||||| |||||||||||||||||||||||| | |
Sbjct 383 GTGTTTCATGGAGATGGAAGAATTGGAGAAATGGAGATATACCCTTCAAGGGAATCGCAG 442
Query 479 -ATCAGCAACAAGATGATGTGATGAAGCAGAGGAAGAAGAAACAGAGGGAAGTAATGGAG 537
| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 443 CAGCAGCAAGAAGATGATGTGATGAAGCAGAGGAAGAAGAAACAGAGGGAAGTAATGGAG 502
Query 538 CTAGCCAAGATGGGAATCAGAATAAGCCACTTTTCTCAATCTGGCGAGAGGTGTCCTCCT 597
|||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 503 GAAGCCAAGATGGGAATCAGAATAAGCCACTTTTCTCAATCTAGCGAGAGGTGTACTCCT 562
Query 598 CTTGCAATACTTACTACAATTTCATCTTGTGGCCTTTGTTTCAAATTAGAAGCTTCACCT 657
|| ||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 563 CTCGCAGTACTTACTACAATTTCATCTTGTGGTCTCTGTTTCAAATTAGAAGCTTCACCT 622
Query 658 TCTC-CAGCTCAGGAGTCACTCAGT-TTATTCTACTCGTCCTGTCTCAGGGACAACAAGA 715
|||| | ||||| ||| |||||||| || |||||||||| ||||||| |||||||||||
Sbjct 623 TCTCTC-GCTCAAGAGCCACTCAGTCTT-CTCTACTCGTCTTGTCTCATGGACAACAAGA 680
Query 716 CAGCAGTAATGCTCTTGGGTGGAGAAGAGCTCCATTTGGTTGCTATGTACTCGGAAAATA 775
| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 681 CGGCAGTAATGCTCCTGGGTGGAGAAGAGCTCCATTTGGTTGCCATGTACTCGGAAAATA 740
Query 776 TCAAGAATGACCGTCCTTGTTTCTGGGCATTTAGTGTTGCTCCTGGAATTTACGATTCCT 835
|||||||||||||||||||||||||||||||||||||||| |||||| | ||||||||||
Sbjct 741 TCAAGAATGACCGTCCTTGTTTCTGGGCATTTAGTGTTGCCCCTGGAGTCTACGATTCCT 800
Query 836 GTCTTGTTATGTTGAATCTTAGATGTCTGGGTATTGTCTTTGATCTTGATGAAACCCTTG 895
||||||| |||||| || |||||||||||||||||||||||||||| |||||||||||||
Sbjct 801 GTCTTGTCATGTTGCATATTAGATGTCTGGGTATTGTCTTTGATCTCGATGAAACCCTTG 860
Query 896 TAGTGGCGAATACCATGCGCTCATTTGAGGATAAGATTGACGGGTTTCAGCGGAGAATAA 955
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 861 TAGTGGCGAATACCATGCGCTCATTTGAGGATAAGATTGACGGGTTGCAGCGGAGAATAA 920
Query 956 ACAACGAGATGGACCCTCAACGCCTTGCCGTTATAGTGGCTGAGATGAAGCGTTATCAAG 1015
|||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 921 ACAATGAGATGGACCCTCAACGCCTTGCCGTTATGGTGGCTGAGATGAAGCGATATCAAG 980
Query 1016 ATGACAAAAATCTATTGAAGCAATATATTGAAAGTGACCAGGTTGTTGAAAACGGGGAGG 1075
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 981 ATGACAAAAATCTATTGAAGCAATATGTTGAAAGTGACCAGGTTGTTGAAAACGGGGAGG 1040
Query 1076 TGATAAAGGTGCAATCTGAAATTGTTCCTGCCTTGTCTGACAACCATCAGCCTCTTGTTC 1135
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1041 TGATCAAGGTGCAATCTGAAATTGTTCCTGCCTTGTCTGACAACCATCAGCCTCTTGTTC 1100
Query 1136 GCCCTCTGATAAGGTTGCAAGAGAAGAATATTATTCTGACTCGCATTAACCCAATGATTC 1195
|||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 1101 GCCCCCTGATAAGGTTGCAAGAGAAGAATATTATCCTGACTCGCATTAACCCGATGATTC 1160
Query 1196 GTGATACAAGTGTTCTTGTGAGAATGAGGCCCTCATGGGAGGAACTTCGAAGCTATTTGA 1255
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1161 GTGATACAAGTGTTCTTGTGAGAATGAGGCCTTCATGGGAGGAACTTCGAAGCTATTTGA 1220
Query 1256 CAGCAAAAGGGCGTAAGCGTTTTGAAGTATATGTTTGCACGATGGCTGAAAGAGATTACG 1315
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1221 CAGCAAAAGGGCGCAAGCGTTTTGAAGTATATGTTTGCACGATGGCTGAAAGAGATTACG 1280
Query 1316 CCTTAGAGATGTGGAGGCTCCTTGATCCAGAAGGGAATTTGATAAACACAAATGACTTGC 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1281 CCTTAGAGATGTGGAGGCTCCTTGATCCAGAAGGGAATTTGATAAACACAAATGACTTGC 1340
Query 1376 TTGCTCGCATCGTTTGTGTGAAATCTGGTTTTAAAAAGTCACTGTTCAATGTGTTTCTCG 1435
| |||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 1341 TGGCTCGCATTGTTTGTGTGAAATCTGGTTTAAAAAAATCACTGTTCAATGTGTTTCTCG 1400
Query 1436 ATGGAACCTGCCATCCAAAGATGGCATTGGTAATTGATGATCGATTGAAAGTTTGGGATG 1495
| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct 1401 ACGGAACCTGCCATCCAAAGATGGCACTGGTAATTGATGATCGACTGAAAGTTTGGGATG 1460
Query 1496 AGAAGGATCAGCCGAGGGTACATGTGGTTCCTGCATTCGCTCCCTATTATTCTCCTCAAG 1555
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1461 AGAAGGATCAGCCGAGGGTGCATGTGGTTCCTGCATTCGCTCCCTATTATTCTCCTCAAG 1520
Query 1556 CTGAAGCTGCTGCAACACCAGTACTATGTGTTGCCAGGAACGTTGCCTGTGGTGTCAGAG 1615
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 1521 CTGAAGCTGCTGCAACACCAGTACTATGTGTTGCCAGAAACGTTGCTTGTGGTGTCAGAG 1580
Query 1616 GTGGATTTTTCAGGGATTTTGATGATAGTCTGCTACCAAGGATTGCTGAAATTTCTTATG 1675
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1581 GTGGATTTTTCAGGGATTTTGATGATAGTCTGCTACCAAGGATTGCTGAAATATCTTATG 1640
Query 1676 AGAATGATGCTGAGGATATTCCTTCTCCGCCTGATGTCAGCCATTATTTGGTGTCGGAGG 1735
||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1641 AGAATGATGTTGAGGATATTCCTTCTCCACCTGATGTCAGCCATTATTTGGTGTCGGAGG 1700
Query 1736 ATGATACATCGGGTTTAAATGGGAACAAAGATCCACTTTCCTTTGACGGGATGGCTGATA 1795
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1701 ATGATACATCGGGTTTAAACGGGAACAAAGATCCACTTTCCTTTGACGGGATGGCTGATG 1760
Query 1796 CTGAAGTGGAGAGAAGACTGAAGGAGGCAATTTCTGCATCTTCAGCTGTCCTTCCGGCGG 1855
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1761 CTGAAGTGGAGAGAAGACTGAAGGAGGCAATTTCTGCATCTTCAGTTGTCCTTCCGGCGG 1820
Query 1856 CAAATATAGATCCGAGGATAGCTGCTCCCGTTCAGTTCCCCATGGCTTCTGCTTCTTCTG 1915
|||||||||||| |||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 1821 TAAATATAGATCCAAGGATAGCTGCTCCCGTTCAGTACCCCATGGCTTCTACTTCTTCTG 1880
Query 1916 TTTCAGTTCCAGTACCAGTAC-A--A---GTCGTGCAACAAGCAATACAACCTTCAGCTA 1969
||||||||||||||||||||| | | ||||||||||||||| ||||||| |||||||
Sbjct 1881 TTTCAGTTCCAGTACCAGTACCAGGACCAGTCGTGCAACAAGCACTACAACCATCAGCTA 1940
Query 1970 TGGCCTTTCCAAGTATTCCATTTCAACAACCTCAACAACCGACATCAATAGCTAAACACT 2029
|||||||||||||| || | |||||||| |||||||||||| |||||||
Sbjct 1941 TGGCCTTTCCAAGT-TT---T--CAACAACC---------GACATCAATAGCAAAACACT 1985
Query 2030 TGGTTCCTTCAGAACCAAGCTTGCAGAGTTCTCCTGCTAGAGAGGAAGGTGAGGTACCTG 2089
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1986 TGATTTCTTCAGAACCAAGCTTGCAGAGTTCTCCTGCTAGAGAGGAAGGTGAGGTACCTG 2045
Query 2090 AATCAGAATTAGATCCAGATACTAGGAGGAGACTCCTCATATTGCAGCATGGACAAGATA 2149
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2046 AATCAGAATTAGATCCAGATACTAGGAGGAGGCTCCTCATATTGCAGCATGGACAAGATA 2105
Query 2150 CTAGGGATCCTGCTCCAAGTGAACCTTCATTTCCTCAGAGACCTCCAGTTCAAGCTCCA- 2208
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2106 CTAGGGATCCTGCTCCAAGTGAACCTTCGTTTCCTCAGAGACCTCCAGTTCAAGCTCCAG 2165
Query 2209 CCCTCACATGTGCAATCAAGAAATGGCTGGTTTCCTGTTGAGGAGGAGATGGATCCTGCT 2268
||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 2166 CCC-CACATGTGCAATCAAGAAATGGTTGGTTTCCTGTTGAGGAGGAGATGGATCCAGCT 2224
Query 2269 CAAATTCGTCGAGCAGTCTCAAAAGAATATCCGTTGGATTCTGAAATGATTCATATGGAA 2328
|||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 2225 CAAATTCGTCGAGCAGTCTCCAAAGAATATCCATTGGATTCTGAAATGATTCATATGGAA 2284
Query 2329 AAGCACAGGCCTCGTCATCCATCAtttttttCTAAGATTGATAACTCAACTCAGTCTGAC 2388
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2285 AAGCACAGGCCTCGTCATCCATCATTTTTTTCTAAGATCGATAACTCAACTCAGTCTGAC 2344
Query 2389 AGGATGCTTCATGAGAATCGCAGGCCGCCAAAGGAGTCTCTCCGGAGAGATGAACAGTTA 2448
||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||
Sbjct 2345 AGGATGCTTCATGAGAATCGCAGGCAGCCGAAGGAGTCGCTCCGGAGAGATGAACAGTTA 2404
Query 2449 CGTTCAAATAACAATCTACCTGACTCTCATCCTTTCTATGGGGAGGATGCGTCTTGGAAT 2508
|| |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2405 CGGCCAAACAACAATCTACCTGGCTCTCATCCTTTCTATGGGGAGGATGCGTCTTGGAAT 2464
Query 2509 CAATCTTCCTCTAGGAACAGTGATCTTGACTTCCTACCTGAACGAAGTGTCTCAGCAACG 2568
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2465 CAATCTTCTTCTAGGAACAGTGATCTTGACTTCCTACCTGAACGAAGTGTCTCAGCAACA 2524
Query 2569 GAGACTTCAGCTGATGTTCTACACGGAATTGCTATCAAATGTGGAGCTAAGGTGGAGTAC 2628
|||| |||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||
Sbjct 2525 GAGAGTTCAGCTGATGTTCTACATGGAATCGCTATCAAATGTGGAACTAAGGTGGAGTAC 2584
Query 2629 AAACCAAGTTTAGTTTCTAGTACAGATTTGCGGTTCTCTGTTGAGGCTTGGCTTTCTAAT 2688
| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2585 AGACCAAGTTTGGTTGCTAGTACAGATTTGCGGTTCTCTGTTGAGGCTTGGCTTTCTAAT 2644
Query 2689 CAAAAAATTGGAGAAGGGATTGGCAAATCGAGAAGAGAAGCCCTGCATAAGGCTGCTGAA 2748
|||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 2645 GAAAAAATTGGTGAAGGGATTGGCAAATCGAGACGAGAAGCCCTGCACAAGGCTGCTGAA 2704
Query 2749 GCTTCTATACAGAATTTAGCTGATGGATATATGCGTGCAAATGGTGACCCAGGGCCCAGC 2808
|||||||||||||| |||||||||| |||||| | ||||||||||||||||||||| |||
Sbjct 2705 GCTTCTATACAGAACTTAGCTGATGTATATATACATGCAAATGGTGACCCAGGGCCAAGC 2764
Query 2809 CACAGAGATGCTACCCCCTTCACCAATGAAAATATAAGTATGGGAAACGCAAATGCGCTT 2868
||||||||||||| |||||||||||||| |||||| | |||||||||||||| |||||||
Sbjct 2765 CACAGAGATGCTAGCCCCTTCACCAATGGAAATATGATTATGGGAAACGCAAGTGCGCTT 2824
Query 2869 AATAATCAGCCATTTGCTAGAGATGAAACAGCGTTGCCAGTTTCTTCTAGACCTACAGAT 2928
|||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||
Sbjct 2825 GATAATCAGCCATTTGCCAGAGATGAAACAGCGATGCCAGTTTCTTCTAGACCTACAGAC 2884
Query 2929 CCGAGATTAGAAGGTTCTATGAGGCACACTGGCTCCATTACTGCACTCAGGGAATTGTGT 2988
|||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 2885 CCGAGATTGGAAGGTTCTATGAGGCACACCGGCTCCATTACTGCGCTCAGGGAATTGTGT 2944
Query 2989 GCATCGGAGGGTCTTGAGATGGCTTTTCAATCTCAGCGTCAGCTTCCATCTGACATGGTC 3048
|||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||
Sbjct 2945 GCATCGGAGGGTTTTGAGATGGCCTTTCAATCTCAGCGTCCGCTTCCATCTGACATGGTC 3004
Query 3049 CACAGAGATGAATTACATGCTCAGGTTGAAATAGATGGGCGTGTTGTAGGGGAAGGAGTT 3108
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 3005 CACAGAGATGAATTACGTGCTCAGGTTGAAATAGATGGGCGTGTTGTAGGGGAAGGAGTT 3064
Query 3109 GGATCGACATGGGACGAAGCTAGAATGCAGGCTGCTGAGAGAGCACTGTCCAGTGTGAGA 3168
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 3065 GGATCGACATGGGACGAAGCTAGAATGCAGGCTGCTGAGAGAGCACTGTGTAGTGTGAGA 3124
Query 3169 TCAATGCTTGGTCAACCTCTGCATAAACGACAAGGATCTCCACGATCATTTGGTGGGATG 3228
|||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct 3125 TCAATGCTTGGTCAACCTGTGCATAAACGACAAGGATCTCCACGATCATTTGCCGGGATG 3184
Query 3229 TCAAACAAGCGATTAAAGCCGGACTTTCAACGGTCTCTGCAACGGATGCCATCTTCGGGA 3288
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 3185 TCAAACAAGCGTTTAAAGCCAGACTTTCAACGGTCTCTGCAACGGATGCCATCTTCAGGA 3244
Query 3289 AGATACTCTTAAAAATAAAACCATGTGAAGAACGAA-C-CA--C---ATTCTACATTAAT 3341
||||||||||||||||||||||||||||||||| || | || | ||||||||| |||
Sbjct 3245 AGATACTCTTAAAAATAAAACCATGTGAAGAACAAAGCACATTCTTGATTCTACATCAAT 3304
Query 3342 TCCATTCTCTTGGTAAAAACAGCTACCAAGACGAATTCTTTGTCAAGTTCCTTTCTTCGC 3401
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3305 TCCATTCTCTTGGTAAGAACAGCTACCAAGACGAATTCTTTGTCAAGTTCCTTTCTTCAC 3364
Query 3402 CAAATGATGATCAAGACAGCGAGAGTTGCCTCTCTTGTATTGATGTAACAACAATTTGAG 3461
|||| |||||||||||||| |||||||| ||||||||||||| |||||||||| || |||
Sbjct 3365 CAAACGATGATCAAGACAGAGAGAGTTGGCTCTCTTGTATTGTTGTAACAACAGTT-GAG 3423
Query 3462 GCGGTTCGCGATTTTTGTATCATAGAAACTCTTGAGTTGAAGCATCAGCTCGAGTGGCCA 3521
|||| || ||||||||||||||| |||||| ||||||||||| |||| |||||| ||
Sbjct 3424 GCGGATCATGATTTTTGTATCATAAAAACTCAAGAGTTGAAGCAACAGCCCGAGTGATCA 3483
Query 3522 CAAAGATAAGACCTAAGGATGAACGTTTAGCTTGTTCTCAGG-CTGTTAAGTTTCCACAA 3580
|| |||||||||||||| ||||||| |||||||||||||||| |||||||||||||| ||
Sbjct 3484 CACAGATAAGACCTAAGCATGAACGATTAGCTTGTTCTCAGGGCTGTTAAGTTTCCATAA 3543
Query 3581 AGCTTT-TTCTGCAGTTTCCATAGTTAACAGTC-CTTGTTTTCACT 3624
|||||| ||||||||||| | |||| |||||| || |||||||||
Sbjct 3544 AGCTTTATTCTGCAGTTTT-ACAGTTCACAGTCTCT-GTTTTCACT 3587
Score = 60.2 bits (32), Expect = 1e-07
Identities = 32/32 (100%), Gaps = 0/32 (0%)
Strand=Plus/Plus
Query 3741 GTGGAATCAACTTATCCTTTATTGAGAAACAT 3772
||||||||||||||||||||||||||||||||
Sbjct 3623 GTGGAATCAACTTATCCTTTATTGAGAAACAT 3654
> Ahg492707 jgi|Araly1|492707|fgenesh2_kg.7__2140__AT4G21680.1
Length=1979
Score = 60.2 bits (32), Expect = 1e-07
Identities = 32/32 (100%), Gaps = 0/32 (0%)
Strand=Plus/Minus
Query 3741 GTGGAATCAACTTATCCTTTATTGAGAAACAT 3772
||||||||||||||||||||||||||||||||
Sbjct 1979 GTGGAATCAACTTATCCTTTATTGAGAAACAT 1948
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 142601726031
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5