BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G21990.1
Length=1785
Score E
Sequences producing significant alignments: (Bits) Value
Ahg945948 jgi|Araly1|945948|scaffold_702177.1 2362 0.0
Ahg943230 jgi|Araly1|943230|scaffold_603774.1 1142 0.0
Ahg475126 jgi|Araly1|475126|fgenesh2_kg.2__256__AT1G62180.1 785 0.0
> Ahg945948 jgi|Araly1|945948|scaffold_702177.1
Length=1417
Score = 2362 bits (1279), Expect = 0.0
Identities = 1372/1418 (97%), Gaps = 1/1418 (0%)
Strand=Plus/Plus
Query 113 AGATTTGGTTTGGAGTGAAAATGGCACTAGCAATCAACGTTTCTTCATCTTCTTCTTCTG 172
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AGATTTGGTTTGGTGTGAAAATGGCACTAGCAATCAACGTTTCTTCATCTTCTTCTTCTG 60
Query 173 CGATCTCAAGCTCTAGCTTCCCTTCTTCAGATCTCAAAGTAACAAAAATCGGATCATTGA 232
|||||||||||||||||||||||||||| |||||||||||| || |||||||||||||||
Sbjct 61 CGATCTCAAGCTCTAGCTTCCCTTCTTCCGATCTCAAAGTACCACAAATCGGATCATTGA 120
Query 233 GGTTATTGAATCGTACCAATGTCTCTGCGGCTTCTCTGAGTTTGTCCGGGAAGAGATCCT 292
|||||||| |||||| ||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 121 GGTTATTGGATCGTATCAATGTCTCTGCGGCGTCTCTGAGTTTATCCGGGAAGAGATCCT 180
Query 293 CCGTGAAAGCTCTTAATGTGCAATCAATTACAAAGGAATCCATTGTTGCTTCTGAGGTTA 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 CCGTGAAAGCTCTTAATGTGCAATCAATTACAAAGGAATCCATTGTTGCTTCTGAGGTTA 240
Query 353 CAGAGAAGCTAGATGTGGTGGAAGTTGAAGACTTTGAGGAACTAGCAAAGAGATTAGAGA 412
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 CAGAGAAGCTAGATGTCGTGGAAGTTGAAGACTTTGAGGAACTAGCAAAGAGATTAGAGA 300
Query 413 ATGCTTCTCCTCTTGAGATCATGGATAAAGCTCTTGAGAAGTTTGGGAATGACATTGCTA 472
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 301 ATGCTTCTCCTCTTGAGATCATGGATAAAGCTCTTGAGAAGTTTGGGAATGACATTGCAA 360
Query 473 TTGCCTTTAGTGGAGCTGAAGATGTTGCTCTGATTGAGTATGCTCATTTAACTGGAAGAC 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 TTGCCTTTAGTGGAGCTGAAGATGTTGCTCTGATTGAGTATGCTCATTTAACTGGAAGAC 420
Query 533 CTTATAGGGTATTCAGTTTGGATACAGGGAGATTGAATCCAGAAACATATAGACTCTTCG 592
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 421 CTTATAGGGTTTTCAGTTTGGATACAGGGAGATTGAATCCAGAAACATACAGACTCTTCG 480
Query 593 ATACCGTGGAGAAACATTACGGTATTCGGATTGAGTATATGTTTCCTGATGCTGTTGAGG 652
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 ATACCGTGGAGAAACATTACGGTATTCGGATTGAGTATATGTTTCCTGATGCTGTTGAGG 540
Query 653 TTCAAGCTTTAGTTAGGAACAAGGGTTTGTTCTCTTTCTATGAAGATGGTCACCAGGAGT 712
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 TTCAAGCCTTGGTTAGGAACAAGGGTTTGTTCTCTTTCTATGAAGATGGTCACCAGGAGT 600
Query 713 GTTGCCGTATTAGAAAGGTGAGACCTTTGAGGCGTGCGTTGAAGGGTTTACGTGCTTGGA 772
| ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 601 GCTGCCGTATTAGAAAGGTGAGACCTTTGAGGCGTGCTTTGAAGGGCTTACGTGCTTGGA 660
Query 773 TCACTGGTCAGAGGAAAGATCAATCACCCGGGACAAGATCGGAGATTCCTGTTGTTCAGG 832
||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||
Sbjct 661 TCACTGGTCAGAGGAAAGATCAATCGCCTGGGACAAGATCGGAGATTCCGGTTGTTCAGG 720
Query 833 TTGATCCAGTGTTTGAAGGATTAGATGGTGGAGTTGGTAGTTTGGTGAAGTGGAATCCGG 892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 721 TTGATCCAGTGTTTGAAGGATTAGATGGTGGAGTTGGTAGTTTGGTGAAGTGGAATCCGG 780
Query 893 TTGCTAATGTTGAAGGGAATGATGTTTGGAATTTCTTGAGGACGATGGATGTTCCTGTCA 952
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 781 TTGCGAATGTTGAAGGGAATGATGTTTGGAATTTCTTGAGGACTATGGATGTTCCTGTCA 840
Query 953 ACACGCTTCACGCTGCGGGTTATGTTTCAATCGGATGTGAGCCATGCACGAGAGCGGTTT 1012
|||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 841 ACACGCTTCATGCTGCTGGTTATGTTTCAATCGGATGTGAGCCATGTACGAGAGCAGTTT 900
Query 1013 TGCCGGGTCAGCATGAGAGAGAAGGGAGATGGTGGTGGGAAGATGCTAAGGCTAAAGAGT 1072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 TGCCGGGTCAGCATGAGAGAGAAGGGAGATGGTGGTGGGAAGATGCTAAGGCTAAAGAGT 960
Query 1073 GTGGCCTTCACAAAGGGAATATCAAGGAGAATACCAATGGAAACGCAACCGCTAATGTCA 1132
|||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 961 GTGGACTTCACAAAGGGAATATCAAGGAGAATACCAATGGAAACGCAACTGCTAATGTCA 1020
Query 1133 ACGGGACAGCCTCAGTCGCGGATATCTTCAATAGCGAGAATGTTGTGAACTTGAGCAGGC 1192
|||||||| || | || |||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 1021 ACGGGACATCCACGGTGGCGGATATTTTCAACAGCGAGAATGTTGTGAACTTGAGCAGGC 1080
Query 1193 AAGGGATTGAGAATTTGATGAAGTTAGAGAACCGGAAAGAGGCTTGGATCGTTGTGCTTT 1252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 AAGGGATTGAGAATTTGATGAAGTTAGAGAACCGGAAAGAGGCTTGGATCGTTGTGCTTT 1140
Query 1253 ATGCACCGTGGTGCCCGTTTTGTCAGGCAATGGAAGCTTCATTCGATGAATTGGCGGATA 1312
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 1141 ATGCACCGTGGTGCCCGTTTTGTCAGGCAATGGAAGCTTCATTTGATGAATTGGCAGATA 1200
Query 1313 AGCTGGGAGGAAGTGGTGTGAAGGTTGCTAAGTTTAGAGCTGATGGTGACCAGAAGGACT 1372
|||| || |||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1201 AGCTCGGCGGAAATGGCGTGAAGGTTGCTAAGTTTAGAGCTGATGGTGACCAGAAGGACT 1260
Query 1373 TTGCCAAAAAGGAGTTGCAGCTTGGAAGCTTTCCAACAATACTTGTGTTCCCAAAGAACT 1432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 TTGCCAAAAAGGAGTTGCAGCTTGGAAGCTTTCCAACAATACTTGTGTTCCCAAAGAACT 1320
Query 1433 CTTCAAGACCAATCAAGTATCCATCAGAGAAGAGAGATGTTGATTCTTTGACATCTTTCT 1492
|||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 1321 CTTCGAGACCAATCAAGTATCCATCAGAGAAAAGAGATGTTGATTCCTTGACATCTTTCT 1380
Query 1493 TGAATCTTGTTCGGTAAATCCGCAATAAAATCCGCCGA 1530
|||||||||||||||||||||| | ||||||||||||
Sbjct 1381 TGAATCTTGTTCGGTAAATCCGTTA-AAAATCCGCCGA 1417
> Ahg943230 jgi|Araly1|943230|scaffold_603774.1
Length=1438
Score = 1142 bits (618), Expect = 0.0
Identities = 979/1151 (85%), Gaps = 34/1151 (3%)
Strand=Plus/Plus
Query 375 AGTTGAAGACTTTGAGGAACTAGCAAAG-AGATTAGAGAATGCTTCTCCTCTTGAGATCA 433
||||| ||| |||| || || |||||| || || ||||||||||| ||||||||||| |
Sbjct 290 AGTTG-AGA--TTGAAGAGCTTGCAAAGAAGCTT-GAGAATGCTTCACCTCTTGAGATTA 345
Query 434 TGGATAAAGCTCTTGAGAAGTTTGGGAATGACATTGCTATTGCCTTTAGTGGAGCTGAAG 493
||||||||||||||||||| | |||||||| ||||||||||| |||||||| || ||||
Sbjct 346 TGGATAAAGCTCTTGAGAAATACGGGAATGATATTGCTATTGCATTTAGTGGTGCAGAAG 405
Query 494 ATGTTGCTCTGATTGAGTATGCTCATTTAACTGGAAGACC-TTATAGGGTATTCAGTTTG 552
|||||||||| ||||||||||||||||| ||||| ||||| || ||| ||||| ||||||
Sbjct 406 ATGTTGCTCTAATTGAGTATGCTCATTTGACTGGGAGACCATT-TAGAGTATTTAGTTTG 464
Query 553 GATACAGGGAGATTGAATCCAGAAACATATAGACTCTTCGATACCGTGGAGAAACATTAC 612
||||||||||| |||||||| || || ||| | | || ||| | ||||||||||| ||
Sbjct 465 GATACAGGGAGGTTGAATCCCGAGACGTATCGGTTTTTTGATGCGGTGGAGAAACACTAT 524
Query 613 GGTATTCGGATTGAGTATATGTTTCCTGATGCTGTTGAGGTTCAAGCTTTAGTTAGGAAC 672
|| ||| | ||||||||||||||||||||| ||||||||||||||| ||||||||||| |
Sbjct 525 GGGATTAGAATTGAGTATATGTTTCCTGATTCTGTTGAGGTTCAAGGTTTAGTTAGGAGC 584
Query 673 AAGGGTTTGTTCTCTTTCTATGAAGATGGTCACCAGGAGTGTTGCCGTATTAGAAAGGTG 732
||||| ||||||||||||||||| |||||||| ||||||||||||||| || ||||||||
Sbjct 585 AAGGGATTGTTCTCTTTCTATGAGGATGGTCATCAGGAGTGTTGCCGTGTTCGAAAGGTG 644
Query 733 AGACCTTTGAGGCGTGCGT-TGAAGGG-TTTACGTGCTTGGATCACTGGTCAGAGGAAAG 790
||||||||||||||||| | | ||||| || | | |||||||| ||||||||||||||||
Sbjct 645 AGACCTTTGAGGCGTGC-TCTTAAGGGCTTAAAG-GCTTGGATTACTGGTCAGAGGAAAG 702
Query 791 ATCAATCACCCGGGACAAGATCGGAGATTCCTGTTGTTCAGGTTGATCCAGTGTTTGAAG 850
|||| || || || || || || |||||||| || |||||||||||||| ||||||||||
Sbjct 703 ATCAGTCTCCAGGAACGAGGTCTGAGATTCCGGTGGTTCAGGTTGATCCTGTGTTTGAAG 762
Query 851 GATTAGATGGTGGAGTTGGTAGTTTGGTGAAGTGGAATCCGGTTGCTAATGTTGAAGGGA 910
| || ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 763 GTTTGGATGGTGGAGTTGGTAGTTTGGTGAAGTGGAATCCGGTTGCGAATGTGGAAGGGA 822
Query 911 ATGATGTTTGGAATTTCTTGAGGACGATGGATGTTCCTGTCAACACGCTT-CACGCTGC- 968
||||||||||||| ||||||||||| ||||||||||| || ||||| || ||||| ||
Sbjct 823 ATGATGTTTGGAACTTCTTGAGGACTATGGATGTTCCGGTTAACACA-TTGCACGCGGCA 881
Query 969 GGGTTATGTTTCAATCGGATGTGAGCCATGCACGAGAGCGGTTTTGCCGGGTCAGCATGA 1028
|||| || | || || ||||||||||| ||||||| ||||||||| ||||| ||||| ||
Sbjct 882 GGGT-ATATATCGATTGGATGTGAGCCTTGCACGAAAGCGGTTTTACCGGGCCAGCACGA 940
Query 1029 GAGAGAAGGGAGATGGTGGTGGGAAGATGCTAAGGCTAAAGAGTGTGGCCTTCACAAAGG 1088
||| ||||||||||||||||||||||||||||| || || || ||||| |||||||||||
Sbjct 941 GAGGGAAGGGAGATGGTGGTGGGAAGATGCTAAAGCCAAGGAATGTGGGCTTCACAAAGG 1000
Query 1089 GAATATCAAGGAGAATACCAATG--GA-AACGCAACCGCT-AATGTCAACGGGACAGCCT 1144
|||| ||||||| || ||| || | |||| || || ||| ||| || || |
Sbjct 1001 GAATGTCAAGGAAAACACCGCTGATGCTAACGTAAACGGGGAATC-CAAAA--AC-GC-T 1055
Query 1145 CAGTCGCGGATATCTTCAATAGCGAGAATGTTGTGAACTT-GAGCAGGCAAGGGATTGAG 1203
|| || |||||||| || || |||||| |||| ||||| |||||||||||||||||||
Sbjct 1056 --GTTGCAGATATCTTTAAGAGTGAGAATCTTGT-AACTTTGAGCAGGCAAGGGATTGAG 1112
Query 1204 AATTTGATGAAGTTAGAGAACCGGAAAGAGGCTTGGATCGTTGTGCTTTATGCACCGTGG 1263
|||||||||||||| |||||||| |||||| |||||||||| ||||||||||| ||||||
Sbjct 1113 AATTTGATGAAGTTGGAGAACCGTAAAGAGCCTTGGATCGTCGTGCTTTATGCTCCGTGG 1172
Query 1264 TGCCCGTTTTGTCAGGCAATGGAAGCTTCAT-TCGATGAATTGGCGGATAAGCTGGGAGG 1322
||||| |||||||| || |||||||| || | | |||||| |||||||||| ||| ||
Sbjct 1173 TGCCCCTTTTGTCAAGCCATGGAAGCATCGTAT-GATGAACTGGCGGATAAATTGGCTGG 1231
Query 1323 AAGTGGTG-TGAAGGTTGCTAAGTTTAGAGCTGATGGTGACCAGAAGGACTTTGCCAAA- 1380
|||||| | | |||||||| || || ||||||||||||||||||||||| ||||| ||
Sbjct 1232 AAGTGG-GATTAAGGTTGCAAAATTCAGAGCTGATGGTGACCAGAAGGATTTTGCTAAGC 1290
Query 1381 AAGGAGTTGCAGCTTGGAAGCTTTCCAACAATACTTGTGTTCCCAAAGAACTCTTCAAGA 1440
||| | |||||||| || ||||| || || |||||||| ||||| |||||||||||||||
Sbjct 1291 AAGAA-TTGCAGCTCGGTAGCTTCCCGACCATACTTGTCTTCCCCAAGAACTCTTCAAGA 1349
Query 1441 CCAATCAAGTATCCATCAGAGAAGAGAGATGTTGATTCTTTGACATCTTTCTTGAATCTT 1500
|| ||||||||||| || |||||||||||||| ||||||||||| || ||||||||||||
Sbjct 1350 CCGATCAAGTATCCGTCTGAGAAGAGAGATGTCGATTCTTTGACTTCGTTCTTGAATCTT 1409
Query 1501 GTTCGGTAAAT 1511
|| || |||||
Sbjct 1410 GTCCGATAAAT 1420
> Ahg475126 jgi|Araly1|475126|fgenesh2_kg.2__256__AT1G62180.1
Length=1629
Score = 785 bits (425), Expect = 0.0
Identities = 909/1134 (80%), Gaps = 68/1134 (6%)
Strand=Plus/Plus
Query 373 GAAGTTGAAGACTTTGAGGAACTAGC-AAAGAGATTAG-AGAATGCTTCTCCTCTTGAGA 430
|||||||||||||||||| |||| || ||| || || | || |||||||||| ||||| |
Sbjct 351 GAAGTTGAAGACTTTGAGCAACTTGCTAAAAAGCTT-GAAG-ATGCTTCTCCACTTGAAA 408
Query 431 TCATGGATAAAGCTCTTGAGAAGTTTGGGA-ATGACATTGCTATTGCCTTTAGTGGAGCT 489
|||||||||||||||||||||||||| ||| | || || || ||||| |||||||| |||
Sbjct 409 TCATGGATAAAGCTCTTGAGAAGTTT-GGAGACGAAATCGCAATTGCTTTTAGTGGTGCT 467
Query 490 GAAGATGTTGC-TCTGATTGAGTATGCTCATTTAACTGG-AAGACCTTATAGGGTATTCA 547
||||||||||| | |||| ||||| |||| ||||||||| ||| |||| |||||| || |
Sbjct 468 GAAGATGTTGCAT-TGATCGAGTACGCTCGTTTAACTGGAAAG-CCTTTTAGGGTTTTTA 525
Query 548 GTTTGGATACAGGGAGATTGAATCCAGAAACATATAGACTCTTCGATACCGTGGAGAAAC 607
|||| ||||||||||| || || || ||||| || |||||||| ||| | || ||||| |
Sbjct 526 GTTTAGATACAGGGAGGTTAAACCCGGAAACGTACAGACTCTTTGATGCTGTCGAGAAGC 585
Query 608 ATTACGGTATTCGGATTGAGTATATGTTTCCTGATGCTGTTGAGGTTCAAGCTTTAGTTA 667
| ||||| ||||| || ||||| |||||||||||||| ||||||||||||||||| || |
Sbjct 586 AGTACGGGATTCGAATCGAGTACATGTTTCCTGATGCAGTTGAGGTTCAAGCTTTGGTGA 645
Query 668 GGAACAAGGGTTTGTTCTCTTTCTATGAAGATGGTCACCAGGAGTGTTGCCGTATTAG-A 726
|||||||||||||||||||||||||||| ||||| || || |||||||||||| | || |
Sbjct 646 GGAACAAGGGTTTGTTCTCTTTCTATGAGGATGGACATCAAGAGTGTTGCCGTGTGAGGA 705
Query 727 AAGGTGAGACCTTTGAGGCGTGCG-TTGAAGGGT-TTACGTGCTTGGATCACTGGTCAGA 784
||| | ||||||||| | ||||| || |||||| ||| |||||||| || || ||||
Sbjct 706 AAG-TAAGACCTTTGCGTCGTGCTCTT-AAGGGTCTTAAA-GCTTGGATTACAGGACAGA 762
Query 785 GGAAAGATCAATCACCCGGGACAAGATCGGAGATTCCTG-TTGTTCAGGTTGATCCAGTG 843
||||||||||||| || ||||| ||||| |||||||| | |||||||||||||||| |||
Sbjct 763 GGAAAGATCAATCTCCGGGGACGAGATCCGAGATTCC-GATTGTTCAGGTTGATCCTGTG 821
Query 844 TTTGAAGGATTAGATGGTGGAGTTGGTAGT-TTGGTGAAGTGGAATCCGGTTG-CTAATG 901
|||||||| ||||||||||| ||||| ||| ||| ||||||||||||| ||| ||||||
Sbjct 822 TTTGAAGGGTTAGATGGTGGTGTTGGAAGTCTTG-TGAAGTGGAATCCT-TTGGCTAATG 879
Query 902 TTGAAGGGAA-TGATGTTTGGAA-TTTCTTGAGGACGATGGATGTTCCTGTCAACACGCT 959
||||||| || |||||||||||| ||| |||||||| |||||||| || || || | |
Sbjct 880 TTGAAGG-AAGTGATGTTTGGAACTTT-TTGAGGACAATGGATGTCCCGGTGAATGCA-T 936
Query 960 T-CACGCTGC-GGGTTATGTTTCAATCGGATGTGAGCCATGCACGAGAGC-GGTT-TTGC 1015
| ||||| || ||| ||||| |||||||| ||||||||||| || || || ||| || |
Sbjct 937 TACACGC-GCAGGGGTATGTGTCAATCGGTTGTGAGCCATGTACTAG-GCCGGTGCTT-C 993
Query 1016 CGGGTCAGCATGAGAGAGAAGGGAGATGGTGGTGGGAAGATGCTAAGGCTAAAGAGTGTG 1075
| |||||||| ||||||||||| || |||||||||||||||||||| |||||||| ||||
Sbjct 994 CAGGTCAGCACGAGAGAGAAGGAAGGTGGTGGTGGGAAGATGCTAAAGCTAAAGAATGTG 1053
Query 1076 GCCTTCACAAAGGGAATATCAAGGAGAATACCAATGGAAACGCAACCGCTAATGTCAACG 1135
| || ||||||||||| ||||||||| | | | ||| || | | | | |||| |
Sbjct 1054 GTCTGCACAAAGGGAACATCAAGGAGGA-AG-A-TGGT---GCTGCGG--A-T-TCAAAG 1103
Query 1136 GGACAGCCTCAGTCGCG-GATATCTTC-AATAGCGAGAATGTTGT-GAACTTGAGCAG-G 1191
| || | || || || || ||| || ||| | ||||| || | | |||||||| |
Sbjct 1104 C--CTGCGGCTGT-GCAAGAGATATTCGAA-AGCAACAATGTGGTTGCA-TTGAGCAGAG 1158
Query 1192 CAAGGGATTGAGAAT-TTGATGAAGTTAGAGAACCGGAAAGAGGCTTGGATCGTTGTGCT 1250
| ||| |||||||| || |||||| ||||||| || |||||||| ||| | ||||| ||
Sbjct 1159 GAGGGG-TTGAGAATCTT-ATGAAGCTAGAGAATCGCAAAGAGGCGTGGTTGGTTGTACT 1216
Query 1251 TTATGCACCGTGGTGCCCGTTT-TGTCAGGCAATGGAAGCTTCATTCGAT-GAATTGGCG 1308
||| || || |||||||| ||| || ||||| |||||||| |||| | || ||||||||
Sbjct 1217 TTACGCTCCTTGGTGCCC-TTTCTGCCAGGCGATGGAAGCATCATAC-ATCGAATTGGCT 1274
Query 1309 GATAAGCTGG-GAGGAAGTGGTGTGAAGGTTGCTAAGTTTAGAGCTGATGGTGACCAGAA 1367
|| || || | | |||| || || || || ||||| ||| | ||||| ||||| |||||
Sbjct 1275 GAGAAACTTGCG-GGAAAAGGAGTTAAAGTGGCTAAATTTCGGGCTGACGGTGAGCAGAA 1333
Query 1368 GGACTTTGCCAAA-AAGGAGTTGCAGCTT-GGAAGCTTTCCAACAATACTTGTGTTCCCA 1425
||| ||||| || ||| | || ||| || || ||||| || || |||||| | || ||
Sbjct 1334 GGAGTTTGCTAAGCAAGAACTT-CAG-TTAGGGAGCTTCCCGACGATACTTCTCTTTCCG 1391
Query 1426 AAGAA-CTCTTCAAGACCAATCAAGTATCCATCAGAGAAGAGAGATGTTGATTC 1478
|| || | || || || | || ||||| || |||||| | ||||||||||||||
Sbjct 1392 AA-AAGCGCTCCACGAGCTATTAAGTACCCTTCAGAGCATAGAGATGTTGATTC 1444
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 67000740955
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5