BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G22110.1
Length=1391
Score E
Sequences producing significant alignments: (Bits) Value
Ahg472482 jgi|Araly1|472482|fgenesh2_kg.1__2436__AT1G22430.1 1243 0.0
Ahg492663 jgi|Araly1|492663|fgenesh2_kg.7__2096__AT4G22110.2 1144 0.0
Ahg472484 jgi|Araly1|472484|fgenesh2_kg.1__2438__AT1G22440.1 1051 0.0
> Ahg472482 jgi|Araly1|472482|fgenesh2_kg.1__2436__AT1G22430.1
Length=1388
Score = 1243 bits (673), Expect = 0.0
Identities = 1026/1195 (86%), Gaps = 29/1195 (2%)
Strand=Plus/Plus
Query 122 ATCT-ATCATCCACCATGGAGAAAACATCAATGTTCTCCATTC-ACGAAGG-AAAGCCGA 178
|||| ||||| ||||||||| || ||||| | ||||| | | ||||||| ||| || |
Sbjct 74 ATCTCATCAT-CACCATGGACAAGACATC--T-TTCTCTA-GCAACGAAGGTAAA-CCAA 127
Query 179 TTCGATGCAAAGCAGCAGTATCTAGAAAACCAGGAGAAGCATTGGTGATAGAAGAGATCC 238
|| |||||||||||||| ||| ||||||| |||||||||| |||||||| ||||| ||||
Sbjct 128 TTAGATGCAAAGCAGCAATATGTAGAAAAGCAGGAGAAGCGTTGGTGATTGAAGACATCC 187
Query 239 ATGTGGATCCACCTCAAGCTTATGAAGTTAGGATAAAGATCATATGTACATCTTTATGTC 298
| |||||||||||||||||||||||||||||||| ||||| ||||||| ||| ||||||
Sbjct 188 ACGTGGATCCACCTCAAGCTTATGAAGTTAGGATTAAGATTTTATGTACTTCTCTATGTC 247
Query 299 ATACCGATGTTTCTTTCTCGAAAATAGACAGTGGACCGCTTGCAAGGTTTCCTAGGATTC 358
| || ||| || | |||| |||| ||||| ||||||| || ||||||||||||||||||
Sbjct 248 ACACTGATCTTACCTTCTGGAAACTAGACTTTGGACCGATTTCAAGGTTTCCTAGGATTC 307
Query 359 TAGGACACGAAGCAGTCGGTGTGATCGAGAGCATTGGTGAACATGT-GAATGGATTTCAA 417
| ||||| ||||||||||||||| ||||||||||||||||| | || | | |||||| ||
Sbjct 308 TTGGACATGAAGCAGTCGGTGTGGTCGAGAGCATTGGTGAAAACGTGGTA-GGATTTAAA 366
Query 418 CAAGGTGACGTCGTTTTGCCAGTGTTTCACCCTCACTGTGAAGAATGTAGAGATTGCAAA 477
||||| ||||||||||||||||| ||||| ||| | || |||||||| | ||| |||||
Sbjct 367 CAAGGCGACGTCGTTTTGCCAGTTTTTCATCCTTATTGCGAAGAATGCAAAGACTGCAAG 426
Query 478 TCCTCAAAGAGCAACTGGTGCGCA-AGATTTGCCGACGATTTCTTATCAAACACGAGACG 536
|| ||||| | ||||||||||| | |||| ||| ||||||||| |||||||||| |||||
Sbjct 427 TCTTCAAAAACCAACTGGTGCG-ACAGATATGCAGACGATTTCATATCAAACACAAGACG 485
Query 537 ATATGGAATGACTTCACGATTCAAAGACTCCTT-TGGAGAAGATATTTACCATTTTCTCT 595
|||||||||| ||||| ||||||||||| ||| ||||||| |||| ||||||||||||
Sbjct 486 ATATGGAATGGCTTCAAGATTCAAAGAC-ACTTCGGGAGAAGTTATTCACCATTTTCTCT 544
Query 596 TTGTCTCGAGTTTTTCTGAATATACGGTCGTCGACATCGCACATCTTGTCAAAATCTCTC 655
|||||||||||||||| ||||| || ||||| || || ||||||||||||||||| ||||
Sbjct 545 TTGTCTCGAGTTTTTCCGAATACACCGTCGTGGATATTGCACATCTTGTCAAAATATCTC 604
Query 656 CTGATATTCCGGTTGATAAAGCAGCATTGCTTAGCTGCGGTGTTTCCACAGGAATTGGAG 715
|||| || || ||||||||||| || ||||| ||||| ||||| ||||||||||||||||
Sbjct 605 CTGAAATCCCTGTTGATAAAGCGGCTTTGCTCAGCTGTGGTGTCTCCACAGGAATTGGAG 664
Query 716 CAGCTTGGAAAGTGGCTAACGTGGAAAAAGGCTCCACCGTTGCAGTTTTTGGCCTTGGTG 775
|||||||||| || |||||||||||| ||||||| |||||||||||||||||||||||||
Sbjct 665 CAGCTTGGAAGGTAGCTAACGTGGAAGAAGGCTCTACCGTTGCAGTTTTTGGCCTTGGTG 724
Query 776 CTGTTGGACTTGCGGTTGGAGAAGGAGCCAGGCTGCGTGGAGCCGGCAA-GATCATTGGT 834
|||||||||||||||||| |||||||||||| || ||||| || | ||| ||||||||||
Sbjct 725 CTGTTGGACTTGCGGTTGCAGAAGGAGCCAGACTACGTGGGGCTG-CAAAGATCATTGGT 783
Query 835 GTTGAT-CTCAATCCAGAAAAATTCGAGCTAGGCAAGAAATTTGGTTTCACGGATTTCAT 893
||||| | |||||| || |||||||||||||| |||||||||||||| |||||||||||
Sbjct 784 ATTGATAC-CAATCCTGATAAATTCGAGCTAGGTAAGAAATTTGGTTTTACGGATTTCAT 842
Query 894 CAATTCTACCTTGTGTGGAGAAAATAAGATTAGCGAGGTGATTAAAGAAATGACTGGAGG 953
|||| ||||||| || |||||||| |||||||| |||||| ||||||||||||| | |||
Sbjct 843 CAATCCTACCTTATGCGGAGAAAAGAAGATTAGTGAGGTGGTTAAAGAAATGACAGAAGG 902
Query 954 AGGAGTTGACTATAGTTTCGAATGCGTTGGTTTACCTTCTTTA-TTGACCGAAGCTTTC- 1011
||| |||||||||||||||||||||||||| ||| |||||||| || ||||| ||||||
Sbjct 903 AGGCGTTGACTATAGTTTCGAATGCGTTGGCTTAGCTTCTTTACTT-ACCGAGGCTTTCA 961
Query 1012 TCCAGCACTCGCACGGGTTCAGGAAAAACGGTAGTGTTGGGGATAGATAAGCAT-CTAAC 1070
|| || || |||||||| |||| ||||| ||| |||||||||| || |||||| | | |
Sbjct 962 TC-AGTACCCGCACGGGAACAGGTAAAACAGTAATGTTGGGGATGGAGAAGCATGC-AGC 1019
Query 1071 GCCAGTAAGTTTGGGTAGCTTTGATCTTCTCAGAGGCAGACATGTTTGTGGAAGCTTGTT 1130
||| | ||||||||||| ||||||||| | | ||||||| || |||| |||||||||||
Sbjct 1020 ACCAATTAGTTTGGGTAGTTTTGATCTTTTAAAAGGCAGAAATATTTGCGGAAGCTTGTT 1079
Query 1131 TGGTGGTCTTAAACCCAAACTAGATATTCCGATTCTGGTTGATCATTAC-TTAAAAAAGG 1189
|||||||| ||| ||||||| |||||||| ||||| || ||||||||| ||||||| ||
Sbjct 1080 CGGTGGTCTGAAATCCAAACTTGATATTCCCATTCTCGTCGATCATTACCTTAAAAA-GG 1138
Query 1190 AGCTTAATTTGGATAGTTTTATTACACATGAATTGAAATTTGAGGAAATCAACAAAGCTT 1249
|||| ||||||||||||||||| ||||||||| |||| ||| |||||||||| || ||||
Sbjct 1139 AGCTCAATTTGGATAGTTTTATCACACATGAACTGAATTTTAAGGAAATCAATAAGGCTT 1198
Query 1250 TCG-ATTTATTAGTGCAAGGAAAGTCTCTCCGCTGCATTCTTTGGATGAACAAGT 1303
||| ||| ||||| | ||||||||||||| ||||||||||| |||||| | ||||
Sbjct 1199 TCGCATT-ATTAGAGGAAGGAAAGTCTCTACGCTGCATTCTATGGATGGATAAGT 1252
> Ahg492663 jgi|Araly1|492663|fgenesh2_kg.7__2096__AT4G22110.2
Length=1273
Score = 1144 bits (619), Expect = 0.0
Identities = 759/825 (92%), Gaps = 15/825 (2%)
Strand=Plus/Plus
Query 109 TAATAAGTTCATAATCTATCATCCACCATGGAGAAAACATCAAT-GTTCTCCATTCACGA 167
||||||||||||| ||||||| |||||||||| || |||| || |||||||||||||||
Sbjct 1 TAATAAGTTCATACTCTATCACCCACCATGGACAAGGCATC-ATCGTTCTCCATTCACGA 59
Query 168 AGGAAAGCCGATTCGATGCAAAGCAGCAGTATCTAGAAAACCAGGAGAAGCATTGGTGAT 227
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 60 AGGAAAGCCGATTCGATGCAAAGCAGCAATATCTAGGAAACCAGGAGAAGCATTGGTGAT 119
Query 228 AGAAGAGATCCATGTGGATCCACCTCAAGCTTATGAAGTTAGGATAAAGATCATATGTAC 287
||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 120 AGAAGAGATCCATGTGGATCCACCTCAAGCTTACGAAGTTAGGATTAAGATCATATGTAC 179
Query 288 ATCTTTATGTCATACCGATGTTTCTTTCTCGAAAATAGACAGTGGACCGCTTGCAAGGTT 347
|||||||||||| |||||||||||||||| |||| |||| ||||||||||||| ||||||
Sbjct 180 ATCTTTATGTCACACCGATGTTTCTTTCTGGAAAGTAGAAAGTGGACCGCTTGTAAGGTT 239
Query 348 TCCTAGGATTCTAGGACACGAAGCAGTCGGTGTGATCGAGAGCATTGGTGAACATGTGAA 407
||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||||||
Sbjct 240 TCCTATGATTCTAGGACACGAAGCAGTCGGTGTGATCGAGAGTATTGGTGAACCTGTGAA 299
Query 408 TGGATTTCAACAAGGTGACGTCGTTTTGCCAGTGTTTCACCCTCACTGTGAAGAATGTAG 467
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 300 TGGATTTCAACAAGGTGACGTCGTTTTGCCAGTGTTTCACCCTCATTGTGAAGAATGTAG 359
Query 468 AGATTGCAAATCCTCAAAGAGCAACTGGTGCGCAAGATTTGCCGACGATTTCTT-ATCAA 526
||| |||||||||||||||||||||||||| |||||||||||||| ||||| | |||||
Sbjct 360 AGACTGCAAATCCTCAAAGAGCAACTGGTGTGCAAGATTTGCCGATGATTT-TGCATCAA 418
Query 527 ACACGAGACGATATGGAATGACTTCACGATTCAAAGACTCCTTTGG-AGAAGATATTTAC 585
|||| ||||| ||||||||||||||| ||||||||||||| || || |||||||||| ||
Sbjct 419 ACACAAGACGGTATGGAATGACTTCAGGATTCAAAGACTC-TTCGGGAGAAGATATTAAC 477
Query 586 CATTTTCTCTTTGTCTCGAGTTTTTCTGAATATACGGTCGTCGACATCGCACATCTTGTC 645
||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||| |||
Sbjct 478 CATTTTCTCTTTGTCTCAAGTTTTTCTGAATATACCGTCGTAGATATCGCACATCTCGTC 537
Query 646 AAAATCTCTCCTGATATTCCGGTTGATAAAGCAGCATTGCTTAGCTGCGGTGTTTCCACA 705
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 538 AAAATGTCTCCTGATATTCCGGTTGATAAAGCAGCATTGCTCAGCTGCGGTGTTTCCACA 597
Query 706 GGAATTGGAGCAGCTTGGAAAGTGGCTAACGTGGAAAAAGGCTCCACCGTTGCAGTTTTT 765
|||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| |||||
Sbjct 598 GGAATTGGAGCAGCTTGGAAAGTGGCTAACATGGAACAAGGCTCCACCATTGCACTTTTT 657
Query 766 GGCCTTGGTGCTGTTGGACTTGCGGTTGGAGAAGGAGCCAGGCTGCGTGGAGCCGGCAAG 825
|||||| ||||||||||||||||||| | | | |||||||||||||||||
Sbjct 658 GGCCTTCGTGCTGTTGGACTTGCGGT---ATCA--ATTT----TGCGTGGAGCCGGCAAG 708
Query 826 ATCATTGGTGTTGATCTCAATCCAGAAAAATTCGAGCTAGGCAAGAAATTTGGTTTCACG 885
||||||||||||||||||||| | ||||||||||| ||||| ||||||||||||||||||
Sbjct 709 ATCATTGGTGTTGATCTCAATGCTGAAAAATTCGACCTAGGTAAGAAATTTGGTTTCACG 768
Query 886 GATTTCATCAATTCTACCTTGTGTGGAGAAAATAAGATTAGCGAG 930
|||||||||||| |||||||||||||| |||| ||||||||||||
Sbjct 769 GATTTCATCAATCCTACCTTGTGTGGAAAAAAGAAGATTAGCGAG 813
Score = 377 bits (204), Expect = 9e-104
Identities = 246/266 (92%), Gaps = 4/266 (2%)
Strand=Plus/Plus
Query 1083 GGGTAGCTTTGATCTTCTCAGAGGCAGACATGTTTGTGGAAGCTTGTTTGGTGGTCTTAA 1142
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 972 GGGTAGCCTTGATCTTCTTAGAGGCAGACATGTTTGTGGAAGCTTGTTTGGTGGTCTTAA 1031
Query 1143 ACCCAAACTAGATATTCCGATTCTGGTTGATCATTACTTAAAAAAGGAGCTTAATTTGGA 1202
||||||||| |||||||| ||||| ||||||||||||||||||||| |||||| ||||
Sbjct 1032 ACCCAAACTGGATATTCCCATTCTCGTTGATCATTACTTAAAAAAG---CTTAATCTGGA 1088
Query 1203 TAGTTTTATTACACATGAATTGAAATTTGAGGAAATCAACAAAGCTTTCGATTTATTAGT 1262
|||||| ||||| |||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct 1089 TAGTTTCATTACGCATGAACTGAAATTTGAGGAAATCAATAAAGCTTTCGATTTATTAGT 1148
Query 1263 GCAAGGAAAGTCTCTCCGCTGCATTCTTTGGATGAACAAG-TGAAGTGATTAATTATGTT 1321
||||| |||||||||||||||||||| |||||||||||| | |||||||||||||||||
Sbjct 1149 ACAAGGGAAGTCTCTCCGCTGCATTCTATGGATGAACAAGGTAAAGTGATTAATTATGTT 1208
Query 1322 GAAACTATATATGTTGAAAAATTGAT 1347
|||| |||||||||||||||| ||||
Sbjct 1209 GAAAGTATATATGTTGAAAAAGTGAT 1234
Score = 159 bits (86), Expect = 4e-38
Identities = 103/111 (93%), Gaps = 1/111 (1%)
Strand=Plus/Plus
Query 932 TGATTAAAGAAATGACTGGAGGAGGAGTTGACTATAGTTTCGAATGCGTTGGTTTACCTT 991
||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 845 TGATTCAAGAAATGACAGGAGGAGGAGTTGACTATAGCTTCGAATGCGTTGGTTTACCTT 904
Query 992 CTTTATT-GACCGAAGCTTTCTCCAGCACTCGCACGGGTTCAGGAAAAACG 1041
||||||| ||||||||||||| |||||| | |||||||||||||||||||
Sbjct 905 CTTTATTTGACCGAAGCTTTCAACAGCACCCCCACGGGTTCAGGAAAAACG 955
> Ahg472484 jgi|Araly1|472484|fgenesh2_kg.1__2438__AT1G22440.1
Length=1291
Score = 1051 bits (569), Expect = 0.0
Identities = 987/1185 (83%), Gaps = 43/1185 (4%)
Strand=Plus/Plus
Query 132 CACCATGGAGAAAACATCAATGTTCTCCATTCA-CGAAGGAAAGCCGATTCGATGCAAAG 190
||||||||| ||| | || | |||||| || ||||||||||||||||||||||||||
Sbjct 96 CACCATGGACAAAGCTTC-A--CTCTCCA-GCACCGAAGGAAAGCCGATTCGATGCAAAG 151
Query 191 CAGCAGTATCT-A-GAAAACCAGGAGAAGCATTGGTGATAGAAGAGATCCATGTGGATCC 248
||||| |||| | | ||| |||||||||| |||||||||||||||||||| || |||||
Sbjct 152 CAGCA--ATCTTACGGAAAGCAGGAGAAGCTTTGGTGATAGAAGAGATCCAAGTTGATCC 209
Query 249 ACCTCAAGCTTATGAAGTTAGGAT-AAAGAT-CATATGTACATCTTTATGTCATACCGAT 306
|||||||||||| ||||||||||| ||| || | ||||||| ||| ||||||| || |||
Sbjct 210 ACCTCAAGCTTACGAAGTTAGGATTAAA-ATTC-TATGTACTTCTCTATGTCACACGGAT 267
Query 307 GTTTCTTTCTCGAAAATAGACAGTGGACCGCTTGCAAGGTTTCCTAGGATTCTAGGACAC 366
||| |||||| |||| |||| ||||||||||||||||||||||||||||| ||||| |||
Sbjct 268 GTTACTTTCTGGAAACTAGAAAGTGGACCGCTTGCAAGGTTTCCTAGGATCCTAGGTCAC 327
Query 367 GAAGCAGTCGGTGTGATCGAGAGCATTGGTG--AACATGTGAATGGATTTCAACAAGGTG 424
||||||||||||||| ||||||| ||||| | ||| | || |||||| ||||||| |
Sbjct 328 GAAGCAGTCGGTGTGGTCGAGAGTATTGGAGCCAACGTA-GAC-GGATTTAAACAAGGCG 385
Query 425 ACGTCGTTTTGCCAGTGTTTCACCCTCACTGTGAAGAATGTAGAGATTGCAAATCCTC-A 483
|||||||||||||||||||||| ||||| ||||||||||| | ||| |||||||| || |
Sbjct 386 ACGTCGTTTTGCCAGTGTTTCAACCTCAATGTGAAGAATGCAAAGAATGCAAATC-TCCA 444
Query 484 AAGAGCAACTGGTGCGCAAGATTTGCCGACGATTTCTTATCAAACACGAGACGATATGGA 543
||||||||||||||| |||||| | | ||||||||||||||||||| ||||||||||||
Sbjct 445 AAGAGCAACTGGTGCACAAGATATACTAACGATTTCTTATCAAACACTAGACGATATGGA 504
Query 544 ATGACTTCACGATTCAAAGACTCCTTTGGAGAAGATATTTACCATTTTCTCTTTGTCTCG 603
||||||||| ||||||| ||||| |||||||||| |||| |||||||| |||||||||||
Sbjct 505 ATGACTTCAAGATTCAAGGACTCTTTTGGAGAAGTTATTCACCATTTTATCTTTGTCTCG 564
Query 604 AGTTTTTCTGAATATACGGTCGTCGACATCGCACATCTTGTCAAAATCTCTCCTGATATT 663
|||||| |||||||||| || || || ||||||||||| ||||||||||||||||| |||
Sbjct 565 AGTTTTACTGAATATACCGTGGTAGATATCGCACATCTCGTCAAAATCTCTCCTGAAATT 624
Query 664 CCGGTTGATAAAGCAGCATTGCTTAGCTGCGGTGTTTCCACAGGAATTGGAGCAGCTTGG 723
|| ||||||| |||||| ||||| |||||||||||| |||||||||||||||| || |||
Sbjct 625 CCCGTTGATATAGCAGCCTTGCTCAGCTGCGGTGTTGCCACAGGAATTGGAGCTGCGTGG 684
Query 724 AAAGTGGCTAACGTGGAAAAAGGCTCCACCGTTGC-AGTTTTTGGCCTTGGTGCTGTTGG 782
||||||||| |||| || |||| ||||| || || | | ||||||||||||||||||||
Sbjct 685 AAAGTGGCTGACGTAGAGGAAGGTTCCACTGTCGCTA-TCTTTGGCCTTGGTGCTGTTGG 743
Query 783 ACTTGCGGTTGGAGAAGGAGCCAGGCTGCGTGGAGCCGGC-AAGATCATTGGTGTTGATC 841
||| ||||||| |||||||| ||| |||| |||||| | |||||||| ||||| ||||
Sbjct 744 ACTCGCGGTTGCAGAAGGAGTCAGATTGCGGGGAGCCA-CTAAGATCATCGGTGTGGATC 802
Query 842 TCAATCCAGAAAAATTCGAGCTAGGCAAGAA-ATTTGGTTTCACGGATTTCATCAATTCT 900
||||||| | ||||| || |||| || || || || | ||||||||| ||||| ||
Sbjct 803 TCAATCCCGCCAAATTTGAAATAGGTAA-AAGATACGGAATGACGGATTTCGTCAATCCT 861
Query 901 ACCTTGTGTGGAGAAAATA-AGATTAGCGAGGTGATTAAAGAAATGACTGGAGGAGGAGT 959
| |||||||| || || | | ||||| |||||||||| ||||||||| | || |||||
Sbjct 862 GCTTTGTGTGGGGAGAAGACA-ATTAGTGAGGTGATTAGAGAAATGACAGAAGTAGGAGC 920
Query 960 TGACTATAGTTTCGAATGCGTTGGTTTACCTTCTTT-ATTGACCGAAGCTTTCTCCAGCA 1018
|||||| ||||| |||||| |||||||| |||| || || || || |||||| ||||
Sbjct 921 TGACTACAGTTTTGAATGCATTGGTTTAGCTTCCTTGATGGAA-GAGGCTTTCAATAGCA 979
Query 1019 CTCGCACGGGTTCAGGAAAAACGGTAGTGTTGGGGATAGAT-AAGCAT-CTAACGCCAGT 1076
||||| | || || || ||||||||| | |||||||| || || | ||| ||||||
Sbjct 980 CTCGCCCTGGATCGGGTAAAACGGTAATATTGGGGATGGAACAAA-AGGCTAT-GCCAGT 1037
Query 1077 AAGTTTGGGTAGCTT-TGATCTTCTCAGAGGCAGA-CATGTTTGTGGAAGC-TTGTTTGG 1133
||| |||||||| || ||||||||||||||||||| | | | ||||||| | ||||| ||
Sbjct 1038 AAGCTTGGGTAG-TTATGATCTTCTCAGAGGCAGAAC-TATATGTGGAA-CATTGTTCGG 1094
Query 1134 TGGTCTT-AAACCCAAACTAGATATTCCGATTCTGGTTGATCATTACTTAAAAAAGGAGC 1192
|||| || ||||||||||| |||||||| ||||| || |||| ||| || ||||||||||
Sbjct 1095 TGGT-TTGAAACCCAAACTTGATATTCCAATTCTCGTGGATCGTTATTTGAAAAAGGAGC 1153
Query 1193 TTAATTTGGATAGTTTTATTACACATGAATTGAAA-TTTGAGGAAATCAACAAAGCTTTC 1251
|||| | || || | |||||||||||||| || ||||||||||| |||||||||||
Sbjct 1154 TTAACCTAGACGGTCTGATTACACATGAATT-AAGCTTTGAGGAAATTAACAAAGCTTTT 1212
Query 1252 GATTTATTAGTGCAAGGAAAGTCTCTCCGCTGCATTCTTTGGATG 1296
|||||||| | | ||||||| ||| |||| ||| || | ||||||
Sbjct 1213 GATTTATTGGCGGAAGGAAACTCTATCCGTTGCGTTGTATGGATG 1257
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 51993184425
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5