BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G22950.1 Length=691 Score E Sequences producing significant alignments: (Bits) Value Ahg492570 jgi|Araly1|492570|fgenesh2_kg.7__2003__AT4G22950.1 1122 0.0 > Ahg492570 jgi|Araly1|492570|fgenesh2_kg.7__2003__AT4G22950.1 Length=688 Score = 1122 bits (607), Expect = 0.0 Identities = 663/690 (96%), Gaps = 4/690 (1%) Strand=Plus/Plus Query 1 ATGGTGAGGGGCAAAACGGAGATGAAGAGGATAGAGAACGCAACAAGCAGGCAAGTGACG 60 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGTGAGGGGCAAAACGGAGATGAAGAGGATAGAGAACGCAACAAGCAGGCAAGTGACA 60 Query 61 TTTTCGAAGAGAAGAAATGGACTCTTGAAGAAAGCCTTCGAATTATCGGTCCTTTGTGAT 120 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 61 TTTTCGAAGAGAAGAAATGGACTCTTGAAGAAAGCTTTCGAATTATCGGTCCTTTGTGAT 120 Query 121 GCTGAAGTTGCTTTGGTTATCTTCTCTCCAAGATCCAAACTCTATGAGTTCTCTAGCTCT 180 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 121 GCTGAAGTTGCTTTGGTCATCTTCTCTCCAAGATCCAAACTCTATGAGTTCTCTAGCTCT 180 Query 181 AGTATAGCAGCAACAATTGAACGCTATCAGAGACGAATAAAAGAAATTGGGAATAATCAT 240 ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||| Sbjct 181 AGTATAGCAAAAACAATTGAACGCTATCAGAGACGAATAAAAGAAATTGGGATTAACCAT 240 Query 241 AAGAGAAATGATAATTCTCAGCAAGCGAGAGACGAAACATCTGGATTGACAAAAAAGATT 300 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 241 AAGAGAAATGATAATTCTCAGCAAGCGAGAGACGAAACATCTGGTTTGACAAAAAAGATT 300 Query 301 GAACAGCTAGAGATATCTAAACGAAAATTGCTTGGAGAAGGCATTGATGCATGTTCCATC 360 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 301 GAACAGCTAGAGACATCTAAACGAAAATTGCTTGGAGAAGGCATTGATGCATGTTCTATC 360 Query 361 GAGGAGCTGCAACAGTTAGAGAATCAGTTGGACCGAAGCTTGAGCAGGATAAGAGCCAAG 420 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 361 GAGGAGCTGCAACAGTTAGAGAATCAGTTGGAGCGAAGCTTGAGCAGGATAAGAGCCAAG 420 Query 421 AAGTACCAATTACTCCGTGAAGAAATTGAGAAGTTGAAGGCAGAGGAGAGGAATCTCGTT 480 ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct 421 AAGTACCAATTACTCCGTGAAGAAATTGAGAAGTTAAAGGAAGAGGAGAGGAATCTCGTT 480 Query 481 AAGGAAAATAAAGATCTGAAGGAGAAGTGGCTTGGAATGGGAACAGC-AACAATAGCATC 539 |||||||||||||| ||||||||||||||||||||||||||| || | |||||||||||| Sbjct 481 AAGGAAAATAAAGAACTGAAGGAGAAGTGGCTTGGAATGGGAGCA-CTAACAATAGCATC 539 Query 540 ATCACAATCAACGTTATCATCATCAGAAGTGAACATAGATGACAATATGGAAGTGGAGAC 599 ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 540 ATCACAATCTACGTTATCATCATCAGAAGTGAACTTAGATGACAATATGGAAGTGGAGAC 599 Query 600 TGGTTTGTTCATTGGACCTCCTGAGACAAGACAATCCAA-AAAATTCCCTCCTCAAAATT 658 ||||||||||||||||||||||||||||||||| | | |||||| | ||||||||||| Sbjct 600 TGGTTTGTTCATTGGACCTCCTGAGACAAGACAGTTGATGAAAATTTC-TCCTCAAAATT 658 Query 659 AATCTTACAACTTCTTCAAAAAGAATGTTT 688 ||||| |||||||||||||||||||||||| Sbjct 659 AATCTCACAACTTCTTCAAAAAGAATGTTT 688 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 25389862722 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5