BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G22990.2
Length=2434
Score E
Sequences producing significant alignments: (Bits) Value
Ahg945819 jgi|Araly1|945819|scaffold_702048.1 3419 0.0
Ahg489997 jgi|Araly1|489997|fgenesh2_kg.6__3131__AT4G11810.1 2069 0.0
Ahg475048 jgi|Araly1|475048|fgenesh2_kg.2__178__AT1G63010.1 630 1e-179
> Ahg945819 jgi|Araly1|945819|scaffold_702048.1
Length=2142
Score = 3419 bits (1851), Expect = 0.0
Identities = 2039/2131 (96%), Gaps = 7/2131 (0%)
Strand=Plus/Plus
Query 270 TGTAGAAGATGGTAGCCTTCGGGAAAAAACTCAAGGAACGGAGCATTCAAGAATGGCAAG 329
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 15 TGTAGAAGATGGTAGCTTTCGGGAAAAAGCTCAAGGAACGGAGCATTCAAGAATGGCAAG 74
Query 330 GATATTATATCAATTACAAATTGATGAAGAAGAAAGTGAAGCAATATAGTCGCCAATTAG 389
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 GATATTACATCAATTACAAATTGATGAAGAAGAAAGTGAAGCAATATAGTCGCCAATTAG 134
Query 390 AAGGAGGCAATCTTGAGCGCCGTCATGTTCTTAAAGATTTCTCAAGGATGCTTGATAATC 449
|||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 135 AAGGCGGGAATCTTGAGCGCCGTCATGTTCTTAAAGATTTCTCAAGGATGCTTGATAACC 194
Query 450 AGATCGAGAAAATCGCTCTTTTCATGTTGGAGCAACAAGGGTTGCTTGCAAGCAGGCTAC 509
|||| |||||||| |||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct 195 AGATTGAGAAAATAGCTCTTTTCATGTTGGAGCAACAAGGATTGCTTGCAAGTAGGCTAC 254
Query 510 AGACACTAAGGGGATCACACGATGCTCTCCAGGAGCAGCCAGACATATCCCACATGTCTT 569
||| |||||||||| | || ||||||||||| |||||||| || ||||| || ||||||
Sbjct 255 AGAGACTAAGGGGACCGCATGATGCTCTCCAAGAGCAGCCGGATATATCTCATATGTCTA 314
Query 570 ATCTAAAGGAAGAGTATAGAGCTGTTGGGCAAGATCTTCTCAAGCTTTTGTTTTTCGTTG 629
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||| || |
Sbjct 315 ATCTAAAGGAGGAGTATAGAGCTGTTGGGCAAGATCTTCTCAAGCTTCTGTTTTTTGTCG 374
Query 630 AGATGAATGCTATTGGTATCCGTAAGATACTGAAGAAATTTGACAAACGGTTTGGTTATC 689
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 375 AGATGAATGCTATTGGTATCCGTAAGATACTGAAGAAATTCGATAAACGGTTTGGTTATC 434
Query 690 GATTCACAAACTATTATGTCAAGACTAGAGCTAACCATCCTTACTCTGAACTCCAGCAAG 749
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 435 GATTCACAAACTATTATGTCAAGACTCGAGCTAACCATCCTTACTCTGAACTCCAGCAAG 494
Query 750 TCTTTAGACATGTGGGCCTTGGAGCTGTTGTTGGAGCCGTATCTCGCAACCTTCATGAGC 809
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 495 TCTTTAGACATGTGGGCCTTGGAGCTGTTGTTGGAGCTGTATCTCGCAACCTTCATGAGC 554
Query 810 TTCAAAACAATCAAGGAAGCTACTTATCGATTTATGATCAACC-AGTTCTTCCTCTTCAA 868
|||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||
Sbjct 555 TTCAAAACAATCAAGGAAGCTACTTATCGATTTATGATCAGCCTA-TTCTTCCTCTTCAA 613
Query 869 GATCCTGTAGTGGACTCAATTAGAGCGGCAGTGGATAGGCTAACGCGGTCAACAAACTTT 928
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 614 GATCCTGTCGTGGACTCAATTAGAGCGGCAGTGGATAGGCTAACGCGGTCAACAAACTTT 673
Query 929 CTACACTTCATGGCTCAGCACGCGCTTATAATGCAAGAAGAGTTACCAAGTCCACAAGAT 988
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 674 CTACACTTCATGGCTCAGCACGCGCTTATAATGCAAGAAGAGTTACCAAGTCCGCAAGAT 733
Query 989 GAGGAAGGGGAAGAAGAAGATGGGAGATATCACTTCATGTCTCTCTTGTTGAATTTGGTC 1048
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 734 GAGGAAGGGGAAGAAGAAGATGGGAGATATCACTTCATGTCTCTCTTGTTGAATTTGGTC 793
Query 1049 AACACGTTTCTCTATATGGTCAATACCTATATCATTGTCCCTACAGCAGATGACTATTCA 1108
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 794 AACACATTTCTCTATATGGTCAATACATATATCATTGTCCCTACAGCAGATGACTATTCC 853
Query 1109 ATGAGCCTCGGTGCAGCAGCAACGGTGTGTGGTGTTGTGATTGGTGCTATGGCTGTAGCT 1168
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 854 ATGAGCCTCGGTGCAGCGGCAACGGTGTGCGGTGTTGTGATTGGTGCTATGGCTGTAGCT 913
Query 1169 CAGCTCTTCTCTTCGGTTTACTTCAGTGCCTGGTCCAATAGATCCTACTTCAAACCACTC 1228
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 914 CAGCTCTTCTCTTCGGTTTACTTCAGCGCCTGGTCCAATAGATCCTACTTCAAACCACTC 973
Query 1229 ATATTCAGTAGCATTGTTCTCTTCATTGGGAACTTGTTATATGCATTAGCTTTTGACTTC 1288
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 974 ATATTCAGTAGCATTGTCCTCTTTATTGGGAACTTGTTATATGCATTAGCTTTTGACTTC 1033
Query 1289 AATTCAATAGCGGTTCTCTTGATCGGGCGGCTTTTCTGTGGATTGGGATCGGCGAGAGCA 1348
||||||||||||||||||||||| || | |||||||||||||| |||||||| ||||||
Sbjct 1034 AATTCAATAGCGGTTCTCTTGATTGGTAGACTTTTCTGTGGATTTGGATCGGCAAGAGCA 1093
Query 1349 GTGAACCGGAGATATATAAGCGACTGTGTACCGTTAAAGATCAGGATGCAAGCTTCTGCG 1408
|||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct 1094 GTGAACCGGAGATATATAAGTGACTGTGTACCGTTAAAGATCAGGATGCAGGCTTCAGCA 1153
Query 1409 GGTTTTGTTAGTGCAAGTGCTCTAGGAATGGCGTGTGGTCCTGCGCTTGCTGGTCTATTG 1468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1154 GGTTTTGTTAGTGCAAGTGCTCTAGGAATGGCGTGTGGTCCTGCGCTTGCTGGTCTATTG 1213
Query 1469 CAAATTAGATTCAAGATCTATAAACTTACATTTAACCAAGATACATTGCCTGGTTGGGTT 1528
||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1214 CAAATCAGATTCACGATTTATAAACTTACATTTAACCAAGATACATTGCCTGGTTGGGTT 1273
Query 1529 ATGGCTGTAGCTTGGCTTATATACTTGGTCTGGTTAGCTATATCGTTTCGTGAGCCTGCA 1588
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1274 ATGGCTGTGGCTTGGCTTATATACTTGGTATGGTTAGCTATATCGTTTCGTGAGCCTGCA 1333
Query 1589 CGTGAGCCTGAGGAGATTCCTAAGACTTCAGAAGAGTCTAATCACTCTGAAGCTGTTCAA 1648
||||||||||||| | ||||||||||||||||||||||||||| ||| |||||||||
Sbjct 1334 CGTGAGCCTGAGGGGCCTCCTAAGACTTCAGAAGAGTCTAATCATTCT---GCTGTTCAA 1390
Query 1649 GATGTGAATCTGGAGAAAGGTATGAAACAACCACTT-CTGCTTACATCAGAAGAGATAGA 1707
||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||
Sbjct 1391 GATGTGAATCTGGAGAAAGGTATGAAACAACCA-TTGCTGCTTACATCAGAAGAAATAGA 1449
Query 1708 AGAACAGGGTGAAGATGAATGTGATGGAAGCGAAGAAGCTTCCGAGGATTCTCGTACACC 1767
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1450 AGAACAGGGTGAAGATGAATGTGATGGAAGCGAAGAAGCTTCTGAGGATTCTCGTACACC 1509
Query 1768 TGCAAACTCCATTTTAGCTGCTTATAGATTACTGACACCTTCAGTAAAAGTTCAACTATT 1827
||||||||||||| ||||||||||||||||||| ||||||||||| || |||||||||||
Sbjct 1510 TGCAAACTCCATTGTAGCTGCTTATAGATTACTCACACCTTCAGTTAAGGTTCAACTATT 1569
Query 1828 GATATACTTCATGCTCAAGTATGCAATGGAGATTCTTCTCTCTGAATCTAGTGTCATCAC 1887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1570 GATATACTTCATGCTCAAGTATGCAATGGAGATTCTTCTCTCTGAATCTAGTGTCATCAC 1629
Query 1888 CACTTACTACTTTGGTTGGTCAACGAGCTCTGTTGCGATCTTCTTGTTTTGTCTCGGTCT 1947
||||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||
Sbjct 1630 CACTTACTACTTTGGTTGGTCCACGAGCTCGGTTGCGATCTTTTTGTTTTGTCTCGGTCT 1689
Query 1948 CACGGTTCTTCCAGTTAACCTCGTCGTTGGAAGCTATATAAGCAACATGTTCGAAGACCG 2007
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1690 CACGGTTCTTCCAGTTAACCTCGTCGTTGGAAGCTATATAAGCAACATGTTCGAAGACCG 1749
Query 2008 GCAAATCCTGTTGGTCTCGGAGATTATGGTCTGTGTAGGAATACTTCTGAGCTTCCATGT 2067
||||||| ||||||| |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1750 GCAAATCTTGTTGGTATCGGAGATTATGGTCTGTGTCGGAATACTTCTCAGCTTCCATGT 1809
Query 2068 CGTTGTTCCCTACACTGTGCCACAATACGTTTGCTCAGGACTCATCATGTTTGTTTCTGC 2127
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1810 CGTTGTCCCCTACACTGTGCCACAATACGTTTGCTCAGGACTCATCATGTTTGTTTCTGC 1869
Query 2128 AGAAGTTCTTGAAGGTGTCAATCTATCGTTACTCTCGAGAGTCATGTCGTCGAGGCTATC 2187
|||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||
Sbjct 1870 AGAAGTTCTTGAAGGTGTTAATCTATCGTTACTCTCTAGAGTTATGTCGTCGAGGCTATC 1929
Query 2188 GAGAGGAACTTATAACGGAGGTTTGCTTTCGACGGAGGCTGGCACGATCGCACGTGTGAT 2247
|||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1930 GAGAGGGACTTATAACGGAGGTTTGCTTTCAACGGAGGCTGGCACGATCGCACGTGTGAT 1989
Query 2248 TGCTGACGCGACGATTACCGTCGCCGGTTTCTTTGGACGGAATATGCTTTTGAATGTTAC 2307
||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||
Sbjct 1990 TGCTGACGCAACGATTACCGTCGCCGGTTACTTCGGACGGAATATGCTTTTGAATGTTAC 2049
Query 2308 ACTGCTTCCGTCTCTAGTCATTTGTGTTTTGTCCATCGTAGCTACTTGTTTTACTTATAA 2367
|| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2050 TCTACTTCCGTCTCTAGTCATTTGTGTTTTGTCCATTGTAGCTACTTGTTTTACTTATAA 2109
Query 2368 CTCCTTGTATTAGTACTCTTGTTACAAATTT 2398
||||||||||||||||| || ||||||||||
Sbjct 2110 CTCCTTGTATTAGTACTTTTTTTACAAATTT 2140
> Ahg489997 jgi|Araly1|489997|fgenesh2_kg.6__3131__AT4G11810.1
Length=2124
Score = 2069 bits (1120), Expect = 0.0
Identities = 1824/2155 (85%), Gaps = 83/2155 (4%)
Strand=Plus/Plus
Query 278 ATGGTAGCCTTCGGGAAAAAA-CTCAAGGAACGGAGCATTCAAGAATGGCAAGGATATTA 336
||||| ||||| |||||||| ||||||||||| |||||| |||||||||||| ||||||
Sbjct 1 ATGGTCGCCTT-TGGAAAAAAGCTCAAGGAACGCAGCATTGAAGAATGGCAAGAATATTA 59
Query 337 TATCAATTACAAATTGATGAAGAAGAAAGTGAAGCAATATAGTCGC-CAATTAGAAGGAG 395
||||||||||||||||||||||||||||||||||||||| ||| | ||| | |||| ||
Sbjct 60 CATCAATTACAAATTGATGAAGAAGAAAGTGAAGCAATATGGTC-CACAAATCGAAGTAG 118
Query 396 GCAA-TCTTGAGCGCCGTCATGTTCTTAAAGATTTCTCAAGGATGCTT-GATAATCAGAT 453
| || ||| || ||||||||||||||||||||||||||||||||| || ||| |||||||
Sbjct 119 G-AAGTCTAGATCGCCGTCATGTTCTTAAAGATTTCTCAAGGATG-TTGGATCATCAGAT 176
Query 454 CGAGAAAATCGCTCTTTTCATGTTGGAGCAACAAGGGTTGCTTGCAAGCAGGCTACAGAC 513
||||||||||||||||||||||||||||||||||| |||||| |||| |||||||| |
Sbjct 177 TGAGAAAATCGCTCTTTTCATGTTGGAGCAACAAGGCTTGCTTTCAAGTAGGCTACA-AA 235
Query 514 A-CTAAGGGGATCACACGATGCTCTCCAGGA-GCAGCCAGACATATCCCACATGTCTTAT 571
| ||||||| || || ||||| ||||| || | |||| ||| |||| | || ||| |
Sbjct 236 AGCTAAGGGAATGGCATGATGCACTCCAAGATG-AGCCTGACTTATCTGAGATATCTAAG 294
Query 572 CTAAAG-GAAGAGTATAGAGCTGTTGGG-CAAGATCTTCTCAAGCTTTTGTTTTTCGTTG 629
|| ||| || | |||||| | | |||| ||||||||||| |||||| |||||||| | |
Sbjct 295 CT-AAGAGAGGCTTATAGATCCG-TGGGACAAGATCTTCTTAAGCTTCTGTTTTTCATCG 352
Query 630 AGATGAATGCTATTGGTATCCGTAAGATACTGAAGAAATTTGACAAACGGTTTGGTTATC 689
| |||||||||||||||||||| |||||||| |||||||| || ||| | || |||||||
Sbjct 353 ATATGAATGCTATTGGTATCCGCAAGATACTAAAGAAATTCGATAAAAGATTCGGTTATC 412
Query 690 GATTCACAAACTATTATGTCAAGACTAGAGCTAACCATCCTTACTCTGAACTCCAGCAAG 749
|||||||||||||||||||||||||| | ||| | |||||||||||| |||| || ||||
Sbjct 413 GATTCACAAACTATTATGTCAAGACTCGCGCTGATCATCCTTACTCTCAACTTCAACAAG 472
Query 750 TCTTTAGACATGTGG---GCCTTGGAGCTGTTGTTGGAGCCGTATCTCGCAACCTTCATG 806
| ||||||||||||| | ||||||||||||||||||||| |||| |||||||||||||
Sbjct 473 TATTTAGACATGTGGTAAGTCTTGGAGCTGTTGTTGGAGCCATATCGCGCAACCTTCATG 532
Query 807 AGCTTCAAAACAATCAAGGAAGCTACTTATCGATTTATGATCAACCAGTTCTTCCTCTTC 866
|||||||||||||| |||||||||||||||| ||||||||||| || |||||||||||||
Sbjct 533 AGCTTCAAAACAATGAAGGAAGCTACTTATCCATTTATGATCAGCCTGTTCTTCCTCTTC 592
Query 867 AAGATCCTGTAGTGGACTCAATT-AGAGCGGCAGTGGATAGGCTAACGCGGTCAACAAAC 925
| |||||||||||||| || ||| ||| |||||||| |||||||| | |||||||||
Sbjct 593 AGGATCCTGTAGTGGATTCGATTAAGA-ATGCAGTGGACAGGCTAACACATTCAACAAAC 651
Query 926 TTTC-TACACTTCATGGCTCAGCACGCGCTT-ATAATGCAAGAAG-AG-T-TACCAA-G- 978
|||| || | ||||||||||| || || || || |||||||| | || | ||| || |
Sbjct 652 TTTCTTA-ATTTCATGGCTCAACATGC-TTTAATCATGCAAGACGAAGATCTACTAATGA 709
Query 979 -TCC-ACAAGATGAGGAAGGGGAAGAAGAAGATGGGAGATATCACTTCATGTCTCTCTTG 1036
||| | ||| ||| ||| |||| ||||||| || |||||||||||||||||||| |||
Sbjct 710 TTCCTGC-AGACGAGCAAGCGGAACAAGAAGAAGGAAGATATCACTTCATGTCTCTATTG 768
Query 1037 TTGAATTTGGTCAACACGTTTCTCTATATGGTCAATACCTATATCATTGTCCCTACAGCA 1096
|| || |||| |||||||||||| |||||||||||||| ||||||||||| ||||||||
Sbjct 769 TTAAACTTGGCCAACACGTTTCTTTATATGGTCAATACATATATCATTGTTCCTACAGCT 828
Query 1097 GATGACTATTCAATGAGCCTCGGTGCAGCAGCAACGGTGTGTGGTGTTGTGATTGGTGCT 1156
||||| || ||||||||||| || |||||||||||||| || |||||||| |||||||||
Sbjct 829 GATGATTACTCAATGAGCCTTGGAGCAGCAGCAACGGTTTGCGGTGTTGTTATTGGTGCT 888
Query 1157 ATGGCTGTAGCTCAGCTCTTCTCTTCGGTTTACTTCAGTGCCTGGTCCAATAGATCCTAC 1216
|||||||| ||||||||||||||||| |||||||||||||| |||||||||| ||| |||
Sbjct 889 ATGGCTGTTGCTCAGCTCTTCTCTTCTGTTTACTTCAGTGCTTGGTCCAATAAATCTTAC 948
Query 1217 TTCAAACCACTCATATTCAGTAGCATTGTTCTCTTCATTGGGAACTTGTTATATGCATTA 1276
|||||||| || ||||| ||||| |||||||| ||| ||||||||||||||||||| ||
Sbjct 949 TTCAAACCGCTTATATTTAGTAGTATTGTTCTTTTCTTTGGGAACTTGTTATATGCTTTG 1008
Query 1277 GCTTTTGACTTCAATTCAATAGCGGTTCTCTTGATCGGGCGGCTTTTCTGTGGATTGGGA 1336
|||| ||||||||||||| |||| |||||||||| || ||||||||||||||||| ||
Sbjct 1009 GCTTATGACTTCAATTCATTAGCACTTCTCTTGATTGGCCGGCTTTTCTGTGGATTTGGT 1068
Query 1337 TCGGCGAGAGCAGTGAACCGGAGATATATAAGCGACTGTGTACCG-TTAAAGATCAGGAT 1395
||||||||||||||||||||||||||||||||||| ||||| ||| | ||| ||| | ||
Sbjct 1069 TCGGCGAGAGCAGTGAACCGGAGATATATAAGCGATTGTGTGCCGCTGAAA-ATCCGAAT 1127
Query 1396 GCAAGCTTCTGCGGGTTTTGTTAGTGCAAGTGCTCTAGGAATGGCGTGTGGTCCTGCGCT 1455
||| ||||| || |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1128 GCAGGCTTCAGCAGGTTTTGTTAGTGCAAGTGCTCTAGGAATGGCGTGTGGTCCTGCTCT 1187
Query 1456 TGCTGGTCTATTGCAAATTAGATT-CAAGATCTATAAACT-T-ACATTTAACCAAGATAC 1512
||||||| | ||||||| |||| |||||| | ||| | | |||||||||||||||||
Sbjct 1188 TGCTGGTTTGTTGCAAACC-GATTTCAAGATAAA-AAA-TGTCACATTTAACCAAGATAC 1244
Query 1513 ATTGCCTGGTTGGGTTATGGCTGTAGCTTGGCTTATA-TACTTGGTCTGGTTAGCTATAT 1571
||| |||||||||||||||||||| |||||||| || ||||| |||||||||||||| |
Sbjct 1245 ATTACCTGGTTGGGTTATGGCTGTTGCTTGGCT-ATTGTACTTAGTCTGGTTAGCTATTT 1303
Query 1572 CGTTTCGTGAGCCTGCACGTGAGCCTGAGGAGATTCCTAAGACTTCAGAAGAGTCTAA-T 1630
||||||| || || |||||||||||||| ||||||| || ||||| ||||||||| |
Sbjct 1304 CGTTTCGAGAACCCGCACGTGAGCCTGAAGAGATTCATA---CTTCACAAGAGTCTACCT 1360
Query 1631 C--A-C---TCT---G--A--A-GCTGTTCAAGATGTGAA-TCTGGAGAAAGGTATGAAA 1675
| | | ||| | | | |||| |||||||| ||| | ||||||||||| | |||
Sbjct 1361 CTGAGCAAATCTTTTGTGATGAAGCTGATCAAGATG-GAAATATGGAGAAAGGTCTTAAA 1419
Query 1676 CAACCACT-TCTGCTTACATCAGAAGAGATAGAAGAACAGGGTGAAGATGA--ATGTG-A 1731
|||| || | ||||| |||||||||| | | | ||||||| |||||| || | | | |
Sbjct 1420 AAACCGCTGT-TGCTTGCATCAGAAGA-A-ACA-GAACAGGATGAAGAAGATGACGGGGA 1475
Query 1732 TGGAAGCGAAGAAGCTTCCGAGGATTCTCGTACACCTGCAAACTCCATTT-TAGCTGCTT 1790
||||||||||||| |||| || ||||| |||| ||| || || ||| ||| |||||||||
Sbjct 1476 TGGAAGCGAAGAATCTTCTGACGATTCCCGTAAACCCGCTAATTCC-TTTGTAGCTGCTT 1534
Query 1791 ATAGATTACTGACACCTTCAGTAAAAGTTCAACTATTGATATACTTCATGCTCAAGTATG 1850
| | | |||| || |||||||| || |||||| | ||||||||||||||||| |||||||
Sbjct 1535 ACAAACTACTCACTCCTTCAGTGAAGGTTCAATTGTTGATATACTTCATGCTTAAGTATG 1594
Query 1851 CAATGGAGATTCTTCTCTCTGAATCTAGTGTCATCACCACTTACTACTTTGGTTGGTCAA 1910
||||||||||||| || || ||||| ||||| | ||||| || ||||| |||||||| |
Sbjct 1595 CAATGGAGATTCTACTATCAGAATCAAGTGTTGTTACCACATATTACTTCGGTTGGTCCA 1654
Query 1911 CGAGCTCTGTTGCGATCTTCTTGTTTTGTCTCGGTCTCACGGTTCTTCCAGTTAACCTCG 1970
||| |||||| | ||||||||||| |||||||| || || ||||| || ||||||||||
Sbjct 1655 TGAGTTCTGTTTCCATCTTCTTGTTCTGTCTCGGGCTAACCGTTCTACCGGTTAACCTCG 1714
Query 1971 TCGTTGGAAGCTATATAAGCAACATGTTCGAAGACCGGCAAATCCTGTTGGTC-TCGGAG 2029
| |||||||||||||| ||||||||||| ||||| |||||||| ||| ||| | || |||
Sbjct 1715 TTGTTGGAAGCTATATCAGCAACATGTTTGAAGATCGGCAAATTCTGCTGG-CGTCAGAG 1773
Query 2030 ATTATGGTCTGTGTAGGAATACTTCTGAGCTTCCATGTCGTTGTTCCCT-ACACTGTGCC 2088
|||||||||||| ||||||||||||| ||||||||||| || | |||| ||||||||||
Sbjct 1774 ATTATGGTCTGTATAGGAATACTTCTCAGCTTCCATGTAGTAAT-CCCTTACACTGTGCC 1832
Query 2089 ACAATACGTTTGCTCAGGACTCATCATGTTTGTTTCTGCAGAAGTTCTTGAAGGTGTCAA 2148
||||||||||| ||||||| ||||||||||||||||||| |||||||||| |||||| ||
Sbjct 1833 ACAATACGTTTTCTCAGGATTCATCATGTTTGTTTCTGCTGAAGTTCTTGCAGGTGTGAA 1892
Query 2149 TCT-ATCGTTACTCTCGAGAGTCATGTCGTCGAGGCTATCGA-GAGGAACTTATAACGGA 2206
|| ||||||||| |||||||| ||||| ||||||||||| | | || ||||| ||||||
Sbjct 1893 -CTTATCGTTACTATCGAGAGTGATGTCATCGAGGCTATC-ACGCGGGACTTACAACGGA 1950
Query 2207 GGTTTGCTTTCGACGGAGGCTGGCACGATCGCACGTGTGATTGCTGACGCGACGATTACC 2266
|| || || |||||||| ||||||||||||||||||||||| || || |||||||| ||
Sbjct 1951 GGGTTACTGTCGACGGAAGCTGGCACGATCGCACGTGTGATAGCGGATGCGACGATCACT 2010
Query 2267 GTCGCCGGTTTCTTTGG-ACGGAATATGCTTTTGAATGTTACACTGCTTCCGTCTCTAGT 2325
| || || || ||||| || || |||||||||||||||||| |||||||| ||| | ||
Sbjct 2011 TTGGCTGGATT-TTTGGGACAGAGTATGCTTTTGAATGTTACTCTGCTTCCTTCTTTGGT 2069
Query 2326 CATTTGTGTTTTGTCCATCGTAGCTACTTGTTTTACTTATAACTCCTTGTATTAG 2380
||| |||||| ||| |||||||||||||||| ||||||||||||||||||||||
Sbjct 2070 CATCTGTGTTGGGTCTATCGTAGCTACTTGTTATACTTATAACTCCTTGTATTAG 2124
> Ahg475048 jgi|Araly1|475048|fgenesh2_kg.2__178__AT1G63010.1
Length=2508
Score = 630 bits (341), Expect = 1e-179
Identities = 981/1281 (77%), Gaps = 80/1281 (6%)
Strand=Plus/Plus
Query 318 AAGAATGGCA-AGGATATTATATCAATTACAAATTGATGAAGAAGAAAGTGAAGCAATAT 376
|||||||| | | | ||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 198 AAGAATGG-AGATGCTATTACATCAATTACAAATTGATGAAGAAGAAAGTGAAACAATAT 256
Query 377 AG-TCGC-CAATTAGAAGGAGGCAATCTTGAGCG-CC--GTCATGTTCTTAAAGATTTCT 431
| | | ||| | |||| || | ||| | | || | |||||||| ||||||||||
Sbjct 257 -GCT-GAACAAATCCAAGGCGG-A-TCTCAA-CATCCTCGCCATGTTCTCAAAGATTTCT 311
Query 432 CAAGGATGCTTGATAATCAGATCGAGAAAA-TCGCTC-TTTTCATGTTGGAGCAACAAGG 489
|||||||||| |||| |||||| |||| || | | || ||||||||||||| ||||||||
Sbjct 312 CAAGGATGCTCGATACTCAGATTGAGACAACT-G-TCCTTTTCATGTTGGAACAACAAGG 369
Query 490 GTTGCTTGCAAGCAGGCTAC-AGACAC-TA-AGGGGATCACACGATGCTCTCCAGGAGCA 546
|||||||||| | ||| | || || | |||| | | || |||||| | | |||||
Sbjct 370 GTTGCTTGCA-G--GGCGATTAGCCAAATTGAGGGAAACGCATGATGCTATACTTGAGCA 426
Query 547 GCCAGACATATCCCACA-T-GTCTTATCTAA-AGGAAG-AGTATAGAG-CTGTTGGGCAA 601
||| |||||||| | | | ||| | ||| || ||| | || |||| | ||||| | |
Sbjct 427 GCCTGACATATCA-AGAATTGTCG-AGCTACGAG-AAGCA-TACAGAGAC-GTTGGACGA 481
Query 602 GATCTTCTCAAGCTTTTGTTTTTCGTTGAGATGAATGCTATTGGTATCCGTAAGATACTG 661
|| |||||| |||| || ||||||||| |||| || ||||| | || ||||||||
Sbjct 482 GACCTTCTCCAGCTCCTGAAATTCGTTGAGTTGAACGCCGTTGGTCTGCGCAAGATACTT 541
Query 662 AAGAAATTTGACAAACGGTTTGGTTATCGATTCACAAACTATTATGTCAAGACTA-GAGC 720
|| ||||| |||||||| ||||||||| ||||| | | ||||| || ||||| | | ||
Sbjct 542 AAAAAATTCGACAAACGTTTTGGTTATAGATTCGCTGATTATTACGTGAAGAC-ACGCGC 600
Query 721 TAACCATCCTTACTCTGAACTCCAGCAAGTCTTTA-GACATGTGGGCCTTGGAGCTGTTG 779
||| |||||||||||| | || || |||||||||| | |||||||| | ||||||||||
Sbjct 601 TAATCATCCTTACTCTCAGCTTCAACAAGTCTTTAAG-CATGTGGGTGTAGGAGCTGTTG 659
Query 780 TTGGAGCCGTATCTCGCAACCTTCATGAGCTTCAA-AACAATCAAGGAAGCTACTTAT-C 837
|||| || | |||||||| ||||||||||||||| || ||| ||||||||| |||| |
Sbjct 660 TTGGGGCAATTTCTCGCAATCTTCATGAGCTTCAAGAA-AATGAAGGAAGCTT-TTATTC 717
Query 838 GATTTATGATCAACCAGTTCTTCCTCTTCAAGATCCTGTAGTGGACTCAATTAGAGCGGC 897
|||||||| ||||| |||||||| ||||| ||||| || || || | || | | | ||
Sbjct 718 AATTTATGACCAACCTGTTCTTCCGCTTCAGGATCCAGTGGTTGAAGCCATAAAAACTGC 777
Query 898 AGTGGATAGGCTAACGCGG-TCAACAAACTTTC-TACA-CTTCATGGCTCAGCACGCGCT 954
||||| | | |||| | || || || |||| | || |||| |||| ||||| || ||
Sbjct 778 GGTGGAAAAGTTAAC-CTTCTCGACGAA-TTTCCT-CAACTTCTTGGCACAGCATGCTCT 834
Query 955 TATAATGCAAGAAGAGTTACCAAGTCCA-CA-AG-ATGAGGAAGGGGAAGAAGAAGA-TG 1010
||| |||||||| || || | ||| || || || | || | | || | || |
Sbjct 835 TATCATGCAAGATGATTTGGTGACTCCTTCAGAGGAT-AC-AATCG-ATGA-GCGGACTT 890
Query 1011 GGAGATATCACTTCATGT-CTCTCTTGTTGAATTT-GGTCAACACGTTTCTCTATATGGT 1068
|| | | ||||| | ||| || | ||| | || ||||| ||| | || |||||
Sbjct 891 ACC-ATTTTAATTCAT-TACTC-CT-G---AATCTAGGA-AACACATTTTTGTACATGGT 942
Query 1069 CAATACCTATATCATTGTCCCTACAGCAGATGACTATTCAATGAGCCTCGGTGCAGCAGC 1128
||| || |||||||| || || ||||| || |||||||| |||||||| || || |||||
Sbjct 943 CAACACTTATATCATCGTTCCGACAGCGGACGACTATTCGATGAGCCTTGGAGCTGCAGC 1002
Query 1129 AACGGTGTGTGGTGTTGTGATTGG-TGCTATGGCTGTAGCTCA-GCTCTTCTCTTCGGTT 1186
|||||| ||||||||||| ||||| | |||||||||| ||||| | | ||||| ||||||
Sbjct 1003 AACGGTTTGTGGTGTTGTCATTGGAT-CTATGGCTGTGGCTCAAG-TATTCTCATCGGTT 1060
Query 1187 TACTTCAGTGCCTGGTCCAATAGATCCTACTTCAAACCACTCATATTCAGTAGCATTGTT 1246
|| ||||| || |||||||| | ||| ||||||||||| || | || || ||||| |
Sbjct 1061 TATTTCAGCGCATGGTCCAACAAATCTTACTTCAAACCTCTTGTGTTTAGCAGCATCGCA 1120
Query 1247 CTCTTCATTGGGAACTTGTTATATGCATTAGCTTTTGACTTC-AATTCAATAGCGGTTCT 1305
||||| || || |||||| | ||||| || |||| ||| | | ||||| |||||| ||||
Sbjct 1121 CTCTTTATCGGAAACTTGATGTATGCGTTGGCTTATGA-TGCCAATTCCATAGCGCTTCT 1179
Query 1306 CTTGA-TCGGGCG-G-CTTTTCTGTGGATTGGGATCGGCGAGAGCAGTGAACCGGAGATA 1362
|| | |||| || | || || || || |||||||| || ||||| || |||||||||||
Sbjct 1180 ATT-ACTCGGCCGTGTCTGTTGTG-GG-TTGGGATCAGCAAGAGCTGTTAACCGGAGATA 1236
Query 1363 TATAAGCGACTGTGTACCGTTAAAGA-TCAGGATGCAAGCTTCTGCGGGTTTTGTTAGTG 1421
||| ||||| ||||| || || | || || | ||||| || || ||||||||||| ||||
Sbjct 1237 TATCAGCGATTGTGTGCCTTTGA-GAATCCGAATGCAGGCATCAGCGGGTTTTGTGAGTG 1295
Query 1422 CAAGTGCTCTAGGAATGGCGTGTGGTCCTGCGCTTGCTGGTCTATTGCAAATTAGATTCA 1481
|||||||||| |||||||| ||||||||||||||||| ||| || | ||||| | |||||
Sbjct 1296 CAAGTGCTCTTGGAATGGCTTGTGGTCCTGCGCTTGCCGGTTTACTCCAAATCAAATTCA 1355
Query 1482 AGATCTATAAACTTACATTTAACCAAGATACATTGCCTGGTTGGGTTATGGCTGTAGCTT 1541
|| | || || |||||||||||||| ||| ||||| || |||||||||||||| ||||
Sbjct 1356 AGTTTTACAAGTTTACATTTAACCAATCTACTTTGCCGGGGTGGGTTATGGCTGTGGCTT 1415
Query 1542 GGCT-TATATACTTGGTCTGG 1561
|||| | | || ||||| |||
Sbjct 1416 GGCTGT-TCTATTTGGTATGG 1435
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 91721309960
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5