BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G23180.1
Length=2185
Score E
Sequences producing significant alignments: (Bits) Value
Ahg492546 jgi|Araly1|492546|fgenesh2_kg.7__1979__AT4G23180.1 2782 0.0
Ahg492547 jgi|Araly1|492547|fgenesh2_kg.7__1980__AT4G23150.1 1024 0.0
Ahg889850 jgi|Araly1|889850|Al_scaffold_0007_1836 987 0.0
Ahg889852 jgi|Araly1|889852|Al_scaffold_0007_1838 680 0.0
Ahg889838 jgi|Araly1|889838|Al_scaffold_0007_1824 652 0.0
Ahg492548 jgi|Araly1|492548|fgenesh2_kg.7__1981__AT4G23130.2 575 5e-163
Ahg492542 jgi|Araly1|492542|fgenesh2_kg.7__1975__AT4G23260.1 499 3e-140
Ahg489975 jgi|Araly1|489975|fgenesh2_kg.6__3109__AT4G11480.1 414 1e-114
> Ahg492546 jgi|Araly1|492546|fgenesh2_kg.7__1979__AT4G23180.1
Length=2181
Score = 2782 bits (1506), Expect = 0.0
Identities = 1978/2200 (90%), Gaps = 56/2200 (3%)
Strand=Plus/Plus
Query 1 AATCAAATTTGTTTCATATATC--A----CT-CAAAGCTTGAT--G-AGAAGAAACACAG 50
|||||||||||||||||||||| | | ||||||||||| | ||||||||||||
Sbjct 1 AATCAAATTTGTTTCATATATCAGAGTTTTTCCAAAGCTTGATGAGAAGAAGAAACACAA 60
Query 51 ATCAAGAAAGCCCAATTATGTCTTATTActcctctttcttcttccttttcctcttctcct 110
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 61 ATCAAGAAAGCCCAATTATGTCTTATTACGCCTCTTTCTTCTTCCTTTTCCTTTTCTCCT 120
Query 111 ttctcACGAGTTTCAGAGTTTCTGCTCAAGATCCCACTTACGTATACCACACCTG-TCAA 169
||||||| ||||||||||||||||||||||||||||||||| |||| |||| ||| || |
Sbjct 121 TTCTCACTAGTTTCAGAGTTTCTGCTCAAGATCCCACTTACCTATATCACATCTGTTC-A 179
Query 170 AATACGGCAAATTACACAAGTAACAGCAC-TTACAACAACAATCTCAAG-ACCCTTTTGG 227
||||||||||||||| | ||||||||| | |||||||| ||||||| || ||||||||||
Sbjct 180 AATACGGCAAATTACTCGAGTAACAGC-CTTTACAACACCAATCTC-AGAACCCTTTTGG 237
Query 228 CTTCTCTTTCTTCCCGCAACGCTTCCTACTCCACCGGATTCCAAAACGCCACCGTCGGCC 287
|||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| |
Sbjct 238 CTTCTCTTTCTTCCCGCAACGCCTCTTACTCCACCGGCTTCCAAAACGCCACCGTCGGGC 297
Query 288 AAGCTCCAGACAGAGTCACCGGACTTTTCAACTGCCGTGGAGATGTCTCAACGGAAGTTT 347
|||||||||||||||||||||||||||| || |||||||||||| |||| || |||||||
Sbjct 298 AAGCTCCAGACAGAGTCACCGGACTTTTTAATTGCCGTGGAGATTTCTCGACAGAAGTTT 357
Query 348 G-C-----CGTAGATGCGTCTCCTTTGCCGTCAACGACACCTTAACTCGGTGTCCTAACC 401
| | ||| | |||||| ||||||| |||||||||||||||| ||||||| | ||
Sbjct 358 GCCTTTGTCGTCGCTGCGTCACCTTTGCTGTCAACGACACCTTAAGTCGGTGTTCGAATG 417
Query 402 AGAAAGAAGCCACACTTTATTACGATGAGTGTGTACTTAGATACTCTAACCAGAATATTC 461
||||||| | |||| | || |||||| ||||| | ||||||||||||||| ||| || |
Sbjct 418 AGAAAGAGGTCACAATCTACTACGATCAGTGTATGCTTAGATACTCTAACGGGAACATAC 477
Query 462 TCTCGACACTAATAACCACCGGTGGAGT-TATCT-TGGTTAACACC-CGGAATGTGACAT 518
|||| || |||| ||| || ||||| | | | ||| ||| || | |||||| ||||
Sbjct 478 TCTCAACCCTAAGCACCGGTGGAGGAGTGTTTATGTGG--AAC-CCTCAGAATGTTACAT 534
Query 519 CTAACCAACTAGACCTGTTAAGTGATTTGGTTTTG-CCTACTCTGAACCAAGCCGCCACC 577
||||||||||||||| || || |||||||| | || || |||||||||||||| |
Sbjct 535 CTAACCAACTAGACCAATTCAGAGATTTGGTCGCGACC-ACGATGAACCAAGCCGCCGCT 593
Query 578 GTAGCCTTG--AACAGTTCCAAAAAATTCGGTACGAGAAAAAACAATTTTACTGCGTTGC 635
| || | || | || ||||| |||||| | | | |||||| ||| || ||||||||||
Sbjct 594 GAAG-C-TGCCAGCAATTCCAGAAAATTTGATGCCAGAAAAGCCAACTTCACTGCGTTGC 651
Query 636 AG-AGTTTCTATGGACTGGTTCAGTGCACACCTGATCTCACGAGACAAGACTGTTCGCGT 694
|| || || || ||||||||||||||||| |||||||| |||||||||||||||| | ||
Sbjct 652 AGAAG-TTGTACGGACTGGTTCAGTGCACTCCTGATCTGACGAGACAAGACTGTTTGAGT 710
Query 695 TGTCTCCAACTG-GTCATCAATCAAATACCTACTGACAGAATTGGTGCAAGAATTATTAA 753
||||| |||| | | |||||||||| | || ||||| | |||||| | |||| ||| | |
Sbjct 711 TGTCTACAACAGAG-CATCAATCAATTGCCCACTGATAAAATTGGGGGAAGATTTA-TGA 768
Query 754 T-CCGAGCTGTACTTCAAGATACGAGATCTACGCGTTTTACACCGAATCCGCCGTT-c-- 809
| | |||||||| |||||||| |||| | ||||||||||||| |||||||||| || |
Sbjct 769 TGCAGAGCTGTAGTTCAAGATTCGAGCTTTACGCGTTTTACAACGAATCCGCCATTACTA 828
Query 810 ca-c--caccaccaccaccaccGTCAATTTCTACTCCTCCAGTTTCAGCTCCTCCGCGAT 866
|| | |||||||||| |||||| | ||||||||||||| || || ||||||||||||
Sbjct 829 CACCTTCACCACCACCTCCACCGCCGGTTTCTACTCCTCCGGTGTCTGCTCCTCCGCGAC 888
Query 867 CTGGAAAAGATGGGAATTCAAAGGTGTTAGTGATAGCCATTGTTGTGCCTATTATAGTGG 926
|||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 889 CTGGGAAAGGTGGGAATTCAACTGTGTTAGTGATAGCCATTGTTGTGCCTATTATAGTGG 948
Query 927 CTGTTCTGCTTTTTATAGCTGGTTATTGTTTCCTTACAAGAAGGGCAAGGAAGAGTTATT 986
||||||||||||| || | ||||||||||||| || ||| |||||||| ||||| ||||
Sbjct 949 CTGTTCTGCTTTTCATCGTTGGTTATTGTTTCATTGCAAAAAGGGCAAAGAAGACTTATG 1008
Query 987 ACACACCATCTGCATTTGCTGGAGATGATATCACAACAGCAGACTCACTACAGCTTGATT 1046
||||| |||||||||||| |||||||||||| ||||| ||||||||||| ||||||||||
Sbjct 1009 ACACAACATCTGCATTTGATGGAGATGATATTACAACTGCAGACTCACTGCAGCTTGATT 1068
Query 1047 ATAGAACAATTCAAACTGCAACAGATGATTTTGTAGAGAGTAATAAGATTGGTCAAGGTG 1106
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1069 ATAGAAAAATTCAAACTGCAACAGATGATTTTGCAGAGAGTAATAAGATTGGTCAAGGTG 1128
Query 1107 GATTTGGTGAGGTTTACAAGGGTACTTTATCGGATGGGACTGAAGTTGCGGTGAAGCGAC 1166
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1129 GATTTGGTGAGGTTTACAAGGGTACTTTATCGGATGGGACTGAAGTTGCGGTGAAGAGAC 1188
Query 1167 TATCAAAGTCATCAGGACAAGGTGAAGTAGAGTTCAAGAACGAGGTTGTTCTTGTTGCAA 1226
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1189 TATCAAAGTTATCAGGACAAGGTGAAGCAGAGTTCAAGAACGAGGTTGTTCTTGTTGCAA 1248
Query 1227 AGCTACAACATAGAAATCTGGTTAGACTTCTTGGGTTTTGTCTAGACGGAGAAGAAAGAG 1286
||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 1249 AGCTACAGCATAGAAATCTGGTTAGACTTCTCGGGTTTTGTCTAGACGGAGAAGAAAGGG 1308
Query 1287 TACTGGTCTACGAGTATGTGCCCAACAAAAGTCTTGATTACTTCCTCTTTGACCCTGCAA 1346
|| | |||||||||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct 1309 TATTAGTCTACGAGTATGTACCCAACAAAAGTCTGGATTACTTCCTCTTTGACCCTGCAA 1368
Query 1347 AGAAAG-GCCAGCTGGATTGGACTCGACGATACAAGATTATCGGTGGAGTTGCTCGAGGG 1405
|| || | ||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1369 AG-CAGAGTCAGTTGGATTGGACTCGGCGATACAAGATTATCGGTGGAGTTGCTCGAGGG 1427
Query 1406 ATTCTGTATCTTCATCAAGACTCACGACTCACAATCATACACCGTGACCTCAAAGCCAGT 1465
||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1428 ATTTTGTATCTTCATCAAGATTCACGACTCACAATCATACACCGTGACCTCAAAGCCAGT 1487
Query 1466 AACATTCTCTTGGACGCGGATATGAATCCTAAAATTGCAGATTTTGGAATGGCTAGGATC 1525
|||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1488 AACATTCTATTGGATGCGGACATGAATCCTAAAATTGCAGATTTTGGAATGGCTAGGATC 1547
Query 1526 TTTGGATTGGACCAAACCGAAGAGAACACAAGCAGAATAGTTGGTACCTATGGTTACATG 1585
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1548 TTTGGATTGGACCAAACCCAAGAGAACACAAGCAGAATAGTTGGTACCTATGGTTACATG 1607
Query 1586 TCTCCCGAGTATGCAATGCATGGTCAGTACTCAATGAAATCTGATGTCTATAGCTTCGGA 1645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1608 TCTCCCGAGTATGCAATGCATGGTCAGTACTCAATGAAATCTGATGTCTATAGCTTCGGA 1667
Query 1646 GTGTTAGTTCTTGAGATTATAAGTGGCAAGAAGAATAGCAGCTTCTACCAAACAGATGGT 1705
||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |||
Sbjct 1668 GTGTTAGTTCTTGAGATTATAAGCGGTAAGAAGAATAGCAGCTTCTACCAAACAGACGGT 1727
Query 1706 GCACATGACTTGGTCTCATATGCTTGGGGGCTTTGGAGTAACGGG-CGACCATTAGAACT 1764
||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||
Sbjct 1728 GCACATGACTTGGTCTCATATGCTTGGGGGCTTTGGAGTAACGGGAC-ACCATTGGAACT 1786
Query 1765 CGTGGATCCAGCTATTGTAGAAAATTGCCAAAGGAATGAAGTTGTTCGATGTGTCCATAT 1824
||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||
Sbjct 1787 CGTGGATCCAGCTATTGCAGATAATTGCCAAAGGAGTGAAGTTGTTCGATGTGTCCATAT 1846
Query 1825 CGGTCTTTTATGTGTTCAAGAAGATCCTGCTGAGCGTCCGACGTTGTCAACCATTGTTCT 1884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1847 CGGTCTTTTATGTGTTCAAGAAGATCCTGCTGAGCGTCCGACGTTGTCAACCATTGTTCT 1906
Query 1885 GATGCTCACTAGTAACACTGTGACTTTACCCGTGCCACGGCAACCCGGTCTTTTCTTTCA 1944
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1907 GATGCTCACTAGTAACACTGTGACTTTACCCGTGCCACGGCAACCAGGTCTTTTCTTTCA 1966
Query 1945 GAGTAGAATTGGAAAAGACCCGCTTGATACAGATACAACGAGCAAATCTCTTCTAGGGTC 2004
||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1967 GAGTAGACTTGGAAATGACCCGCTTGATACAGATACAACGAGCAAATCTCTTATAGGGTC 2026
Query 2005 TGTTGACGATGCATCCATCACAGATATACATCCTCGATGATGATGAGTTTTTCCCTTCAT 2064
||||||||||||||||||||||||| || ||||||||||| ||||||| || |||||
Sbjct 2027 TGTTGACGATGCATCCATCACAGATGTATATCCTCGATGAAGATGAGTA---CC-TTCAT 2082
Query 2065 ACCTGATTCCTGAATCTATTGGTGTTGAAAATAAGTTAAAAACTTCTTTTGTTAT-AGAA 2123
||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||
Sbjct 2083 ACCTGATTCCTGAATCTATTGGTGTTGAAAATAAGTTTAAAACTTCTTTTGT-AGCAGAA 2141
Query 2124 TGTTTGTATTGTAATTGTAACCACAAGCAAGTATAAGATA 2163
|||||||||||||||||||||||||||||||||||||||
Sbjct 2142 CGTTTGTATTGTAATTGTAACCACAAGCAAGTATAAGATA 2181
> Ahg492547 jgi|Araly1|492547|fgenesh2_kg.7__1980__AT4G23150.1
Length=1656
Score = 1024 bits (554), Expect = 0.0
Identities = 1321/1681 (79%), Gaps = 93/1681 (6%)
Strand=Plus/Plus
Query 84 ctttcttcttccttttcctcttctcctttctcACGAGTTTCAGAGTTTCTGCTCAAGATC 143
||||| ||||||||||||| ||||| || ||||| | ||||| | |||||||||||| |
Sbjct 17 CTTTCATCTTCCTTTTCCTTTTCTCATTCCTCACTACTTTCACTGCTTCTGCTCAAGAAC 76
Query 144 CCACTTACGTATACC-ACACCTGTCAAAATACGG-CAAATTACACAAGTAACAGCACTTA 201
| | | || || || | |||| ||||| || ||| |||| ||||||||||||||||
Sbjct 77 CTAATGACCTA-GCCTATTGGTGTCCAAATA-GGACAACTTACTCAAGTAACAGCACTTA 134
Query 202 CAACAACAATCTCAAGACCCTTTTGGCTTCTCTTTCTTCCCGCAACGCTTCCTACTCCAC 261
| || |||||| || |||||||| | ||||| ||||||| |||||| || ||||||||
Sbjct 135 CTTCACCAATCTTAAAACCCTTTTTTCCTCTCTCTCTTCCCCCAACGCCTCTTACTCCAC 194
Query 262 CGGATTCCAAAACGCCACCGTCGGCCAAGCTCCAGACAGAGTCACCGGACTTTTCAACTG 321
|||||| ||||||||||| || || ||||| || ||||| ||||| ||||||||| ||
Sbjct 195 CGGATTTCAAAACGCCACGGTGGGACAAGCCCCCGACAGGGTCACTGGACTTTTCCTTTG 254
Query 322 CCGTGGAGA-TGTCTCAACGGAAGTTTGCCGTAGA-TGCGTCTCCTTT-GCCGTCAACGA 378
||| ||||| | |||| ||||||||||||||| | |||||| |||| |||| |||||
Sbjct 255 CCGCGGAGACT-TCTCGCCGGAAGTTTGCCGTA-ACTGCGTC-GCTTTCTCCGTTAACGA 311
Query 379 CA-CCTTAACTCGGTGTCCTAACCAGAAAGAAGCCACACTT-TATTACGATGAGTGTGTA 436
| | |||| ||||||||| || |||| ||||| || ||||||||||| || |
Sbjct 312 -ATCGTTAATTCGGTGTCCAAATCAGAGAGAAG-TTGTGTTCTATTACGATGAATGCATG 369
Query 437 CTTAGATACTCTAACCAGAATATTCTCTCGAC-ACTAATAACCACCGGTGGAG--T-TAT 492
|| ||||||||| || |||||||||| ||||| | || || | || |||| | |||
Sbjct 370 CTCAGATACTCTCACAAGAATATTCTATCGACGGCCAA-CACAAACGAAGGAGAATATAT 428
Query 493 CTTGGTTAACAC-CCGGA-ATGT-GAC-A-TC-TAA-CCAACTAGACCTGTTAAGTGA-T 544
| || ||| | | || | | | || || | ||| | ||| ||| | | | |
Sbjct 429 CATGACGAACGCTAATAATATTTCTCCTATTCAAAATCAAAC-AAACCAGTTTA-TAATT 486
Query 545 TTGGTTTTGCCTACTCTGAACCAAGCCGCCACCGTAGCCTTGAACAGTTCCAAAAAATTC 604
||||| || ||| | |||||||||| ||||| | ||| |||||||| | |||||||
Sbjct 487 TTGGTGTTATCTAATATGAACCAAGCTGCCACGGAAGCAGCCAACAGTTCTAGAAAATTC 546
Query 605 GGTACGAGAAAAAAC-AATTTTACTGCGTTGCAGAGTTTCTATGGACTGGTTCAGTGCAC 663
||||| ||| | | || || || || | |||| ||| || || || ||||| |||||
Sbjct 547 TCTACGATAAAGACCGAA-TTGACCGCACTCCAGACTTTGTACGGGCTCGTTCAATGCAC 605
Query 664 ACCTGATC--TCACGAGACAAGACTG-TTCGCGTTGTCT-CCAACTGGT-CATCAATCA- 717
||||||| ||| |||| || |||| | | ||||||| ||| | | ||||||| |
Sbjct 606 TCCTGATCTTTCAAGAGA-AA-ACTGCAT-GAGTTGTCTGACAA--GTTCCATCAAT-AG 659
Query 718 AATACCTACTGAC-AGAATTGGTGCAAGA-ATTATTAATCCGAGCTGTACTTCAAGATAC 775
| | || | | | |||||||| |||||| | | || || || |||| |||||| |||
Sbjct 660 ACTGCC-ATTTTCTAGAATTGGAGCAAGACA-TCTTTGGCCAAGTTGTAATTCAAGGTAC 717
Query 776 GAGATCTACGCGTTTTAC-ACCGAATCCGCCGTTccaccaccaccaccaccaccGTCAAT 834
||| | |||||||| ||| | |||| ||||| || | |||||||||| |||
Sbjct 718 GAGCTTTACGCGTTCTACGA-CGAAACCGCCATT--GGTA-CACCACCACCGCCG----- 768
Query 835 TTCTACTCCTCCAGTT-TCAGCTCCTCCGCGATCTGG-AAAAGATGGGAATTCAAAGGTG 892
|| ||||| ||| || ||||| | | | |||| ||||| |||||| ||||| |||
Sbjct 769 --CT--GCCTCC-GTTGGCATCTCCTTCACTACCTGGTAAAAG-TGGGAACTCAAATGTG 822
Query 893 TTAGTGATAGCCATTGTTGTGCCTATTATAGTGGCTGTTCTGCTTTTTATAGCTGGTTAT 952
|||||| ||||||||||||||||||| ||| |||||||||||||| | ||||||||||||
Sbjct 823 TTAGTGGTAGCCATTGTTGTGCCTATCATATTGGCTGTTCTGCTTCTCATAGCTGGTTAT 882
Query 953 TGTTTCCTTA--C-AAGAAGGGCAAGGAAGAGTTATTACACACCATCTGCATTT-GCTGG 1008
||||| ||| | ||| ||||||| ||||| |||| |||| || |||| ||| | ||
Sbjct 883 TGTTT--TTATGCAAAG-AGGGCAAAGAAGACTTATGGCACAGCACCTGC-TTTAGATGA 938
Query 1009 AGATGATATCACAA-CAGCAGACTCACTACAGCTTGATTATAGAACAATTCAAACTGCAA 1067
|||||||| |||| || ||| || || || |||||||||||| |||||||| || |||
Sbjct 939 AGATGATAAAACAACCA-TAGAGTCTCTGCAACTTGATTATAGAGCAATTCAAGCTACAA 997
Query 1068 CAGATGATTTTGT-AGAGAGTAATAAGATTGGTCAAGGTGGATTTGGTGAGGTTTACAAG 1126
|| |||||||| | ||||| |||||| ||||||| ||||||||||||||| |||||||||
Sbjct 998 CAAATGATTTT-TCAGAGAATAATAAAATTGGTCGAGGTGGATTTGGTGACGTTTACAAG 1056
Query 1127 GGTAC-TTTATCGGATGGGACTGAAGTTGCGGTGAAGCGACTATC-AAAGTCATCAGGAC 1184
||||| ||| || |||| || |||||||| |||||| |||| || ||| |||||| ||
Sbjct 1057 GGTACATTT-TCAAATGGAACCGAAGTTGCAGTGAAGAGACTGTCGAAA-ACATCAGAAC 1114
Query 1185 AAGGTGA-AGTAGAGTTCAAGAACGAGGTTGTTCTTGTTGCAAAGCTACAACATAGAAAT 1243
||||||| | ||| |||||||||||||||||| |||||||||| || | || | ||||
Sbjct 1115 AAGGTGACA-CAGAATTCAAGAACGAGGTTGTTGTTGTTGCAAATCTTCGGCACAAAAAT 1173
Query 1244 CTGGTTA-GACTTCTTGGGTTTTGTCTAGACGGAGAAGAAA-GAGTACTGGTCTACGAGT 1301
||||||| || |||| || |||| | |||| |||||||||| || || ||||||| ||||
Sbjct 1174 CTGGTTAGGA-TTCTCGGATTTTCTATAGAAGGAGAAGAAAGGA-TATTGGTCTATGAGT 1231
Query 1302 ATGTGCCCAACAAAAGTCTTGATTACTTCCTCTTTGACCCTGCAAAGAAAGGCCAGCTGG 1361
||||| || ||||| |||||| ||||||| ||||| |||||||||||||| ||||||
Sbjct 1232 ATGTGGAAAATAAAAGCCTTGATAACTTCCTATTTGATCCTGCAAAGAAAGGTCAGCTGT 1291
Query 1362 ATTGGACTCGA-CGATACAAGATTATCGGT-GGAGTTGCTCGAGGGATTCTGTATCTTCA 1419
| ||||| | | |||||| | || || || ||| ||||| ||||||| || ||||||||
Sbjct 1292 ACTGGACAC-AGCGATACTATATCATTAGTGGGA-TTGCTAGAGGGATCCTATATCTTCA 1349
Query 1420 TCAAGACTCACGACTCACAATCATACACCGTGACCTCAAAGCCAGTAACATTCTCTTGGA 1479
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 1350 TCAAGATTCACGACTCACAATCATACACCGTGACCTCAAAGCGAGTAACATTCTCCTGGA 1409
Query 1480 CGCGGATATGAATCCTAAAATTGCAGATTTTGGAATGGCTAGGATCTTTGGATTGGACCA 1539
|| |||||||||||||||||||| |||||||||||||| |||||||| ||| |||||||
Sbjct 1410 TGCAGATATGAATCCTAAAATTGCTGATTTTGGAATGGCAAGGATCTTCGGAATGGACCA 1469
Query 1540 AACCGAAG-AGAACACAAGCAGAATAGTTGGTACCTATGGTTACATGTCTCCCGAGTATG 1598
|||| | | |||||||||||||||||||||||||||| |||||||||||||| || ||||
Sbjct 1470 AACCCA-GCAGAACACAAGCAGAATAGTTGGTACCTACGGTTACATGTCTCCTGAATATG 1528
Query 1599 CAATGCATGGTCAGTACTCAATGAAATCTGATGTCTATAGCTTCGGAGTGTTAGTTCTTG 1658
| |||| ||| || | ||||||||||||||||||||| || || ||||| ||||||||||
Sbjct 1529 CGATGCGTGGCCAATTCTCAATGAAATCTGATGTCTACAGTTTTGGAGTATTAGTTCTTG 1588
Query 1659 AGATTATAAGTGGCAAGAAGAATAGCAGCTTCTACCAAACAGATGGTGCACATGACTTGG 1718
|||||||||| || | |||||||| ||||||| || | ||||||| ||||| |||||||
Sbjct 1589 AGATTATAAGCGGTAGGAAGAATAACAGCTTCAACGAGACAGATGACGCACAAGACTTGG 1648
Query 1719 T 1719
|
Sbjct 1649 T 1649
> Ahg889850 jgi|Araly1|889850|Al_scaffold_0007_1836
Length=1821
Score = 987 bits (534), Expect = 0.0
Identities = 1023/1251 (82%), Gaps = 66/1251 (5%)
Strand=Plus/Plus
Query 836 TCTACTCCTCCAGTT-TCAGCTCCTCCGCGATCT-GGAAAAGATGGGAATTCAAAGGTGT 893
||||| ||||| ||| || ||||| | | | || ||||||| | ||||||||| ||||
Sbjct 556 TCTACGCCTCC-GTTGACATCTCCTTCACTACCTGGGAAAAG-TAGGAATTCAACTGTGT 613
Query 894 TAGTGATAGCCATTGTTGTGCCTATTATAGTGGCTGTTCTGCTTTTTATAGCTGGTTATT 953
||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 614 TAGTGGTAGCCATTGTTGTGCCTATTATAGTGGTTGTTCTGCTTTTCATAGCTGGTTATT 673
Query 954 GTTTCCTTAC-AAGAAGGGCAAGGAAGAGTTAT--TACA-CACC--ATC----TG-C--- 999
|||||||| | ||| ||||||| ||||| |||| ||| |||| || || |
Sbjct 674 GTTTCCTTGCAAAG-AGGGCAAAGAAGACTTATGGCACAGCACCTGCTCTTGATGACATT 732
Query 1000 -ATT-TGC-TG-G-AGATGATATCACAACAGCAGACTCACTACAGCTTGATTATAGAACA 1054
||| ||| | | |||||||| ||||| |||| || || || ||||||||| || ||
Sbjct 733 TATTGTGCAAGAGAAGATGATAAAACAACCTCAGAGTCTCTGCAACTTGATTATGGAGCA 792
Query 1055 ATTCAAACTGCAACAGATGATT-TTGTAGA-GAGTAATAAGATTGGTCAAGGTGGATTTG 1112
|||||| |||||||| || ||| || ||| || |||||| ||||||| |||||||||||
Sbjct 793 ATTCAAGCTGCAACAAATAATTATT-CAGAGGA-TAATAAAATTGGTCGAGGTGGATTTG 850
Query 1113 GTGAGGTTTACAAGGGTAC-TTTATCGGATGGGACTGAAGTTGCGGTGAAGCGACTATC- 1170
|||| |||||||||||||| ||| || |||| || |||||||| |||||| |||| ||
Sbjct 851 GTGATGTTTACAAGGGTACATTT-TCAAATGGAACCGAAGTTGCAGTGAAGAGACTTTCG 909
Query 1171 AAAGTCATCAGGACAAGGTGAAGTAGAGTTCAAGAAC-GAGGTTGTTCTTGTTGCAAAGC 1229
||| |||||| ||||||||| | || |||||| || ||||||| |||||||||| |
Sbjct 910 AAA-ACATCAGAACAAGGTGACGCGGAATTCAAG-ACAGAGGTTGCAGTTGTTGCAAATC 967
Query 1230 TACAACATAGAAATCTGGTTAGACTTCTTGGGTTTTGTCTAGACGGAGAAGAAA-GAGTA 1288
| | || |||||||||||||| ||||| ||||||| ||||||||||||||||| || ||
Sbjct 968 TTCGGCACAGAAATCTGGTTAGGCTTCTCGGGTTTTCTCTAGACGGAGAAGAAAGGA-TA 1026
Query 1289 CTGGTCTACGAGTATGTGCCCAACAAAAGTCTTGATTACTTCCTCTTTGACCCTGCAAAG 1348
||||||| ||||||||| | || ||||| |||||| ||||||| ||||| |||||||||
Sbjct 1027 TTGGTCTATGAGTATGTGGCAAATAAAAGCCTTGATAACTTCCTATTTGATCCTGCAAAG 1086
Query 1349 AAAGGCCAGCTGGATTGGACTCGA-CGATACAAGATTATCGGT-GGAGTTGCTC-GAGGG 1405
||| | |||||| | ||||| | | |||||| |||| || ||| ||| |||| | |||||
Sbjct 1087 AAAAGTCAGCTGTACTGGACAC-AGCGATACCAGATCATTGGTGGGA-TTGC-CAGAGGG 1143
Query 1406 ATTCTGTATCTTCATCAAGACTCACGACTCACAATCATACACCGTGACCTCAAAGCCAGT 1465
|| || |||||||||||||| |||||||| || |||||||||||||||||||||| |||
Sbjct 1144 ATCCTATATCTTCATCAAGATTCACGACTAACGATCATACACCGTGACCTCAAAGTGAGT 1203
Query 1466 AACATTCTCTTGGACGCGGATATGAATCCTAAAATTGCAGATTTTGGAATGGCTAGGATC 1525
||||||||| |||| || ||||||||||| ||||||||||||||||||||||| || |||
Sbjct 1204 AACATTCTCCTGGATGCAGATATGAATCCAAAAATTGCAGATTTTGGAATGGCAAGAATC 1263
Query 1526 TTTGGATTGGACCAAACCGAAG-AGAACACAAGCAGAATAGTTGGTACCTATGGTTACAT 1584
|||||| |||| |||||| || |||||||| |||||||||||||||||| ||||||||
Sbjct 1264 TTTGGAATGGATCAAACC-CAGCAGAACACACTCAGAATAGTTGGTACCTACGGTTACAT 1322
Query 1585 GTCTCCCGAGTATGCAATGCATGGTCAGTACTCAATGAAATCTGATGTCTATAGCTTCGG 1644
|||||| || |||||||||| ||| |||| |||||||||||||||||||||||| |||||
Sbjct 1323 GTCTCCTGAATATGCAATGCGTGGCCAGTTCTCAATGAAATCTGATGTCTATAGTTTCGG 1382
Query 1645 AGTGTTAGTTCTTGAGATTATAAGTGGCAAGAAGAATAGCAGCTTCTACCAAACAGATGG 1704
|||||||||||||||||||||||| || |||||||||||||||||| || | |||||||
Sbjct 1383 AGTGTTAGTTCTTGAGATTATAAGCGGTAAGAAGAATAGCAGCTTCAACGAGACAGATGA 1442
Query 1705 TGCACATGACTTGGTCTCATATGCTTGGGGGCTTTGGAGTAACGGG-CGACCATTAGAAC 1763
||||| |||||||| || |||||||| |||||||||||||||| | | ||||||| |
Sbjct 1443 CGCACAAGACTTGGTGACACATGCTTGGAGGCTTTGGAGTAACGGAAC-AGCATTAGACC 1501
Query 1764 TCGTGGATCCAG-CTATTGTAGAAAATTGCCA-AAGGAATGAAGTTGTTCGATGTGTCCA 1821
| ||||||||| | |||||||| || ||||| || | |||||| |||||||| ||||
Sbjct 1502 TAGTGGATCCAATC-ATTGTAGATAACTGCCAGAAT-AGTGAAGTGGTTCGATGCATCCA 1559
Query 1822 TATCGGTCTTTTATGTGTTCAAGAAGATCCTGCTGA-GCGTCC-GACGTTGTCAACCATT 1879
||| |||||||||||||||||||||||||||| | | || ||| | | | |||||| |||
Sbjct 1560 TATAGGTCTTTTATGTGTTCAAGAAGATCCTG-TAAAGCATCCAGCCAT-GTCAACGATT 1617
Query 1880 GTTC-TGATGCTCACTAGTAACACTGTGACTTTACCCGTGCCACGGCAACCCGGTCTTTT 1938
| | |||||||||| | ||| |||||||||||||| | ||| | |||||| ||| ||||
Sbjct 1618 -TCCGTGATGCTCACCAATAATACTGTGACTTTACCAGCGCCTCAGCAACCGGGTTTTTT 1676
Query 1939 CTTTCAGAGTAGAATTGGAAAAGACCC-GCTTGATACAGATA---CAAC---GAGCAAAT 1991
| | |||||||| ||||| |||| ||||||| |||||| |||| |||||| |
Sbjct 1677 CGTGAAGAGTAGACCCGGAAAC-ACCCCGCTTGATTCAGATAAATCAACAACGAGCAAGT 1735
Query 1992 CTCTTCTAGGGTCTGTTGACGATG-CATCCATCACAGATATACATCCTCGA 2041
|| ||| || ||| ||||||| | |||| || | ||| || ||||||||
Sbjct 1736 CTTTTCCAGTATCTTTTGACGA-GACATCTATAAGTGATTTATATCCTCGA 1785
> Ahg889852 jgi|Araly1|889852|Al_scaffold_0007_1838
Length=2088
Score = 680 bits (368), Expect = 0.0
Identities = 604/716 (84%), Gaps = 24/716 (3%)
Strand=Plus/Plus
Query 1337 GACCCTGCAAAG-AAAGGCCAGCTGGATTGGACTCGACGATACAAGATTATCGG-TGGAG 1394
|||||| ||||| ||| |||||| | ||||||| |||||||||||| || || |||
Sbjct 1375 GACCCTACAAAGCAAA-TTCAGCTGAACTGGACTCTACGATACAAGATCATTGGAGGGA- 1432
Query 1395 TTGCTCGAGGGATTCTGTATCTTCATCAAGACTCACGA-CTCACAATCATACACCGTGAC 1453
||||||| |||||||| |||||||||||||| || | | |||||||||||||||||||||
Sbjct 1433 TTGCTCGGGGGATTCTATATCTTCATCAAGATTCGC-AGCTCACAATCATACACCGTGAC 1491
Query 1454 CTCAAAGCCAGTAACATTCTCTTGGACGCGGATATGAATCCTAAAATTGCAGATTTTGGA 1513
||||||| |||||||||||| | || |||||||| ||||| ||||||||||||||||||
Sbjct 1492 CTCAAAGTAAGTAACATTCTCCTAGATGCGGATATAAATCCGAAAATTGCAGATTTTGGA 1551
Query 1514 ATGGCTAGGATCTTTGGATTGGACCAAACCGAAGAGAACACAAGCAGAATAGTTGGTACC 1573
|||||||||||||| ||||||||||||||| | || ||||||||||||||||||||||||
Sbjct 1552 ATGGCTAGGATCTTCGGATTGGACCAAACCCAGGATAACACAAGCAGAATAGTTGGTACC 1611
Query 1574 TATGGTTACATGTCTCCCGAGTATGCAATGCATGGTCAGTACTCAATGAAATCTGATGTC 1633
|| ||||||||| ||||||| ||||| |||||||| || | |||||||||||||||||||
Sbjct 1612 TACGGTTACATGGCTCCCGAATATGCGATGCATGGCCAATTCTCAATGAAATCTGATGTC 1671
Query 1634 TATAGCTTCGGAGTGTTAGTTCTTGAGATTATAAGTGGCAAGAAGAATAGCAGCTTCTAC 1693
|||||||||||||||||||||||||||||||||||||| | |||||||||||| ||| ||
Sbjct 1672 TATAGCTTCGGAGTGTTAGTTCTTGAGATTATAAGTGGTAGGAAGAATAGCAGTTTCCAC 1731
Query 1694 CAAACAGATGGTGCACATGACTTGGTCTCATATGCTTGGGGGCTTTGGAGTAACGGG-CG 1752
| ||||||||||||| |||||| || || |||||||| ||||||||| |||||| |
Sbjct 1732 GAGTCAGATGGTGCACAAGACTTGCTCACACATGCTTGGAGGCTTTGGAATAACGGAAC- 1790
Query 1753 ACCATTAGAACTCGTGGATCCAGCT-ATTGTAGAAAATTGCCA-AAGGAATGAAGTTGTT 1810
| ||||||| |||||||||||| || || ||||| |||||||| ||| | |||||| ||
Sbjct 1791 AGCATTAGACCTCGTGGATCCA-CTTATAGTAGATAATTGCCAGAAG-AGTGAAGTGGTG 1848
Query 1811 CGATGTGTCCATATCGGTCTTTTATGTGTTCAAGAAGATCCTGCTGA-GCGTCCGACGTT 1869
||||| ||||||| |||||||||||||||||||||||||||| | | |||||| || |
Sbjct 1849 CGATGCATCCATATTGGTCTTTTATGTGTTCAAGAAGATCCTG-TAAAGCGTCCTACAAT 1907
Query 1870 GTCAACCATTGTTC-TGATGCTCACTAGTAACACTGTGACTTTACCCGTGCCACGGCAAC 1928
|||||| || ||| |||||||||| ||||| |||||||||||||| ||||| || ||||
Sbjct 1908 ATCAACCGTT-TTCATGATGCTCACCAGTAATACTGTGACTTTACCAGTGCCTCGACAAC 1966
Query 1929 CCGG-TCTTTTCTTTCAGAGTAGAATTGGAAAAGACCCGCTTGATACAGAT-A--C-A-- 1981
| || | ||||| |||| |||||| | ||| ||||||| |||| ||||| | | |
Sbjct 1967 CAGGGT-TTTTCATTCAAAGTAGACCCGTAAAGGACCCGCCTGATTCAGATCAGTCTACC 2025
Query 1982 ACGAGCAAATCTCTTCTAGGGTCTGTTGACGATGCATCCATCACAGATATACATCC 2037
|||| ||| ||| ||| || |||| ||||||||| ||| || || ||| || ||||
Sbjct 2026 ACGACCAAGTCTATTCCAGCGTCTATTGACGATGAATCGATTACTGATTTATATCC 2081
> Ahg889838 jgi|Araly1|889838|Al_scaffold_0007_1824
Length=2115
Score = 652 bits (353), Expect = 0.0
Identities = 891/1142 (78%), Gaps = 71/1142 (6%)
Strand=Plus/Plus
Query 234 TTTCTTCCCGCAACGCTTCCTACTCCACCGGATTCCAAAACGCCACCGTC-GGCCAAGCT 292
|||||||||| ||||| || ||||||||||||||||||||||||| || | || ||||
Sbjct 272 TTTCTTCCCGTAACGCCTCTTACTCCACCGGATTCCAAAACGCCA-CGGCAGGAAAAGCC 330
Query 293 CCAGACAGAGTCACCGGACTTTTCAACTGCCGTGGAGATGTCTCAACGGAAGTTTGCCGT 352
|| ||||| ||||||||||||||| || || ||||| ||||| |||||||||||||||
Sbjct 331 CCCGACAGGGTCACCGGACTTTTCCTTTGTCGCGGAGACGTCTCGACGGAAGTTTGCCGT 390
Query 353 AGATGCGTC-TCCTTTGCCGTCAACGACACC-TTAACTCGGTGTCCTAACCAGAA-AGAA 409
|| |||||| | ||||||||||||||||||| |||| ||||||||| | | || ||||
Sbjct 391 AGCTGCGTCGT-CTTTGCCGTCAACGACACCTTTAA-TCGGTGTCCGGA-TAAAAGAGAA 447
Query 410 GCCACACTT-TATTACGATGAGTGTGTACTTAGATACTCTAACCAGAATATTCTCTCGAC 468
||| || |||||||| ||||| | || ||||||||| || ||||||| || |||||
Sbjct 448 GCC-GTGTTCTATTACGAGGAGTGCATGCTCAGATACTCTGACAAGAATATACTATCGAC 506
Query 469 -ACTA-ATAACCACCGGTGGAGTT-ATCTTGGTTAACACCC-GGAATGTGACATCTAACC 524
|| || || | ||| ||| || ||| || ||| ||| ||| | | ||||| |
Sbjct 507 GGTTACAT-ACGA-CGGAGGA-TTAATCATGACGAAC-CCCAACAATATTTCTTCTAATC 562
Query 525 AACTAGACCT-GTTAAGT-GATTTGGTTTTG-CCTACTCTGAACCAAGCCGCCACCGTAG 581
|| ||| || ||| || | || ||| | | || || |||||||||| ||| ||||
Sbjct 563 AAAGAGA-CTCGTT-CGTAGCTTCGGTGTCGTCC-ACAATGAACCAAGCTGCCGTCGTAA 619
Query 582 CCTTGAACAGTTCCAAAAAATTCGGTACGAGAAAAAACAAT-TTTACTGC-GTTGCAGAG 639
| |||||||| | ||||||| |||| | | || | || || | | | ||||
Sbjct 620 CAGCCAACAGTTCTAGAAAATTCTATACG-TTAGAGACCGTGTTAACCCCAG-TCCAGAC 677
Query 640 TTTCTATGGACTGGTTCAGTGCACACCTGATCTCACGAGACAAGACTG-TTCGCGTTGTC 698
||| ||||| |||||||||||||| | |||||| || ||||||||||| || | | |||
Sbjct 678 TTTGTATGGGCTGGTTCAGTGCACTCGTGATCTTACAAGACAAGACTGCTT-GAGCTGTT 736
Query 699 TCCAACTGGTC-ATCAATCAAATA-CCTA-C-TGACAG-AATTGGTGCAAGAATTATTAA 753
| ||| | || |||||| | || || | | | || | | |||||| |||| || || |
Sbjct 737 TGCAA-AGTTCTATCAAT--AGTATCC-ATCTTTAC-GCAGTTGGTGGAAGATTTGTTTA 791
Query 754 TCCGAGCTGTACTTCAAGATACGAGATCTACGCGTTTTAC-ACCGAA--TCC----G--- 803
||| ||||||| | | || |||||| | ||| | || ||| || ||| || |
Sbjct 792 TCCTAGCTGTAATGCTAGGTACGAGCTTTACTCATTCTACAACGGAACGGCCATTGGAAC 851
Query 804 --C-C--GTTccaccaccaccaccaccacc-GT-CAAT-TTCTACT-C--CTCCAGTTTC 852
| | | ||||| |||| |||||||||| | | || | || | |||||| | |
Sbjct 852 ACCACTAGGTCCACTACCATCACCACCACCACTACCATCGCCGGCTCCAGCTCCAGCTCC 911
Query 853 AGCTCCTCCGCGATC-TGGAAAAGATGGGAATTCAAAGGTGTTAGTGATAGCCATTGTTG 911
||||||| | | | | ||| |||| ||| |||||||| ||||| ||| ||||||||||||
Sbjct 912 AGCTCCTTCACTA-CATGGGAAAGGTGGAAATTCAAATGTGTTGGTGGTAGCCATTGTTG 970
Query 912 TGCCTATTATAGTGGCTGTTCTGCTTTTTATAGCTGGTTATTGTTTCCTTACAAGAAGGG 971
||||||||| ||||| || ||||||||||||||||||||||||||||||| |||||||||
Sbjct 971 TGCCTATTACAGTGGTTGCTCTGCTTTTTATAGCTGGTTATTGTTTCCTTGCAAGAAGGG 1030
Query 972 CAAGGAAGAGTTATTACACACCATCTGCATTTGCTGGAGATGATATCACAACAGCAGACT 1031
||| ||||| || | | || || | || |||| |||||||||||| ||||| | ||| |
Sbjct 1031 CAAAGAAGACTTCTGATACTGCACCAGCCTTTGATGGAGATGATATAACAACCGTAGAGT 1090
Query 1032 CACTACAGCTTGATTATAGAACAATTCAAACTGCAACAGATGA-TTTTGTAGAGAGTAAT 1090
|||| || |||||||||| || |||| | |||||||| || | |||| ||| | ||||
Sbjct 1091 CACTGCAACTTGATTATAAAATGATTCGAGCTGCAACAAATAAGTTTT-CAGAAAATAAT 1149
Query 1091 AAGATTGGTCAAGGTGGATTTGGTGAGGTTTACAAGGGTACT-TTATCGGATGGGACTGA 1149
||||||||||||||||||||||||||||||||||||||||| || ||| |||| |||||
Sbjct 1150 AAGATTGGTCAAGGTGGATTTGGTGAGGTTTACAAGGGTACACTT-TCGAATGGAACTGA 1208
Query 1150 AGTTGCGGTGAAGCGACTATCAAAGTCATCAGGACAAGGTGA-AGTAGAGTTCAAGAACG 1208
||||||||||||| |||||||||| ||||||||||||||||| | |||||||||||||||
Sbjct 1209 AGTTGCGGTGAAGAGACTATCAAAATCATCAGGACAAGGTGAGA-TAGAGTTCAAGAACG 1267
Query 1209 AGGTTGTTCTTGTTGCAAAGCTACAACATAGAAA-TCTGGTTAGACTTCTTGGGTTTTGT 1267
|||||||| | ||||||||||| || || | ||| | ||||||| ||||| ||||||| |
Sbjct 1268 AGGTTGTTGTAGTTGCAAAGCTTCAGCACA-AAAGTTTGGTTAGGCTTCTCGGGTTTTCT 1326
Query 1268 CTAGACGGAGAAGAAAGAGTACTGGTCTACGAGTATGTGCCCAACAAAAGTCTTGATTAC 1327
||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |||
Sbjct 1327 CTAGACGGAGAAGAAAGGGTACTGGTCTACGAGTATGTGCCCAATAAAAGCCTTGACTAC 1386
Query 1328 TT 1329
||
Sbjct 1387 TT 1388
Score = 627 bits (339), Expect = 1e-178
Identities = 529/619 (85%), Gaps = 20/619 (3%)
Strand=Plus/Plus
Query 1340 CCTGCAAAGA-AAGGCCAGCTGGATTGGACTCG-ACGATACAAGATTATCG--GTGGAGT 1395
|||||||| | ||||||| ||||| |||||| | |||| ||||||| || | | ||| |
Sbjct 1504 CCTGCAAA-ACAAGGCCAACTGGACTGGACT-GAACGACACAAGATCATTGAAG-GGA-T 1559
Query 1396 TGCTCGAGGGATTCTGTATCTTCATCAAGACTCACGACTCACAATCATACACCGTGACCT 1455
||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1560 TGCTCGAGGGATTTTGTATCTTCACCAAGATTCACGACTCACAATCATACACCGTGACCT 1619
Query 1456 CAAAGCCAGTAACATTCT-CTTGGACGCGGATATGAATCCTAAAATTGCAGATTTTGGAA 1514
||||| ||||||||||| || ||| |||||| ||||||| |||||||| ||||||||||
Sbjct 1620 AAAAGCAAGTAACATTCTTCT-GGATGCGGATTTGAATCCCAAAATTGCTGATTTTGGAA 1678
Query 1515 TGGCTAGGATCTTTGGATTGGACCAAACCGAAGAGAACACAAGCAGAATAGTTGGTACCT 1574
|||| |||||||| ||| ||||||||||| | ||||||||||||||||||||||||||||
Sbjct 1679 TGGCAAGGATCTTCGGAATGGACCAAACCCAGGAGAACACAAGCAGAATAGTTGGTACCT 1738
Query 1575 AT-GGTTACATGTCTCCCGAGTATGCAATGCATGGTCAGTACTCAATGAAATCTGATGTC 1633
| ||||||||| |||| || |||| ||| ||||| || | |||| ||||||||||||||
Sbjct 1739 -TCGGTTACATGGCTCCTGAATATGTAATACATGGCCATTTCTCAGTGAAATCTGATGTC 1797
Query 1634 TATAGCTTCGGAGTGTTAGTTCTTGAGATTATAAGTGGCAAGAAGAATAGCAGCTTCTAC 1693
|||||||| |||||||||||||||||||||||||| || |||||||| | |||||| |||
Sbjct 1798 TATAGCTTTGGAGTGTTAGTTCTTGAGATTATAAGCGGTAAGAAGAACAACAGCTTTTAC 1857
Query 1694 CAAACAGATGGTGCACATGACTTGGTCTCATATGCTTGGGGGCTTTGGAGTAACGGGCGA 1753
| || || || |||||| |||||||||||||||||||| | || |||||||| ||| |
Sbjct 1858 GAGACTGACGGGGCACATAACTTGGTCTCATATGCTTGGAGTCTATGGAGTAA-GGGA-A 1915
Query 1754 C--CATTAGAACTCGTGGATCCAGCTATTGTAGAAAATTGCCAAAGGAATGAAGTTGTTC 1811
| |||| || |||||||||||| |||| |||| |||||||||| || |||||| ||||
Sbjct 1916 CAGCATTGGATCTCGTGGATCCAATTATTATAGATAATTGCCAAAAGAGTGAAGTGGTTC 1975
Query 1812 GATGTGTCCATATCGGTCTTTTATGTGTTCAAGAAGATCCTGCTGAGCGTCCGA-CGTTG 1870
|||| ||||||| |||||||||||||||||||||||||||| |||||||||| | | |
Sbjct 1976 GATGCATCCATATAGGTCTTTTATGTGTTCAAGAAGATCCTGAGGAGCGTCCGATCAT-G 2034
Query 1871 TCAACCATTGTTCTGATGCTCACTAGTAACACTGTGACTTTACCCGTGCCACGGCAACCC 1930
||||||||| || |||||||||||| | | |||||||||||||| ||||| | |||||
Sbjct 2035 TCAACCATTTTTATGATGCTCACTAATGATACTGTGACTTTACCAGTGCCTCAACAACCA 2094
Query 1931 GG-TCTTTTCTTTCAGAGT 1948
|| | ||||| ||||||||
Sbjct 2095 GGAT-TTTTCGTTCAGAGT 2112
> Ahg492548 jgi|Araly1|492548|fgenesh2_kg.7__1981__AT4G23130.2
Length=2044
Score = 575 bits (311), Expect = 5e-163
Identities = 691/869 (80%), Gaps = 47/869 (5%)
Strand=Plus/Plus
Query 1010 GATGATATCACAACAGCAGACTCACTACAGCTTGATTAT-AGAACAATTCAAACTGCAAC 1068
||||| || ||||| |||| ||| | ||| |||||| | || ||| || |||| ||
Sbjct 964 GATGACATTACAACTGCAGGGTCATTGCAGTTTGATTTTAAG-GTTATTGAAGCTGCGAC 1022
Query 1069 AGATGATTTTGTAGA-GAGTAATAAGA-TTGGTCAAGGTGGATTTGGTGAGGTTTACAAG 1126
|||| | ||| | || | |||| || | | ||||||||||||||||| | |||||||||
Sbjct 1023 AGATAAGTTT-TCGATGTGTAACAA-ACTCGGTCAAGGTGGATTTGGACAAGTTTACAAG 1080
Query 1127 GG--TACTTTATCGGATGGGACT-GAAGTTGCGGTGAAGCGACTATC-AAAGTCATCAGG 1182
|| ||| || || || ||| | |||||||||||||| ||||||| ||| |||||||
Sbjct 1081 GGCATAC-TT-TCTAAT-GGATTACAAGTTGCGGTGAAGAGACTATCGAAA-ACATCAGG 1136
Query 1183 ACAAGGTGAAGTAGAGTTCAAGAACGAGGTTGTTCTTGTTGCAAAGCTACAACATAGAAA 1242
|||||||||| ||||||||||||||| |||||| |||| |||||||| || || |||||
Sbjct 1137 ACAAGGTGAAAAAGAGTTCAAGAACGAAGTTGTTGTTGTGGCAAAGCTTCAGCACAGAAA 1196
Query 1243 TCTGGT-TAGACTTCTTGGGTTTTGTCTAGACG-GAGAAGA-AAGAGTACTGGTCTACGA 1299
||| || || |||||||| |||||| |||| | | ||||| || | |||| ||||||||
Sbjct 1197 TCTTGTCAAG-CTTCTTGGATTTTGTTTAGA-GAGGGAAGAGAA-AATACTTGTCTACGA 1253
Query 1300 GTATGTGCCCAACAAAAGTCTTGATTACTTCCTCTTTGACCCT-GCAAAGAAAG-GCCAG 1357
|| |||| | || |||||||||||||||||| | ||||| || | || | || |||||
Sbjct 1254 GTTTGTGTCTAATAAAAGTCTTGATTACTTCTTGTTTGATTCTAG-AATG-CAGAGCCAG 1311
Query 1358 CTGGATTGGACT-CGACGATACAAGATTATCGGTGGAGTTGCTCGAGGGAT-TCTGTATC 1415
|| ||||||||| | | | || ||||| || || ||| ||||| |||| || | ||||||
Sbjct 1312 CTAGATTGGACTAC-AAGGTATAAGATCATAGGAGGAATTGCTAGAGGAATAT-TGTATC 1369
Query 1416 TTCATCAAGACTCACGACTCACAATCATACACCGTGACCTCAAAGCCAGTAACATTCTCT 1475
| |||||||| |||||||||||||||||||| |||||||||||||| ||||||| ||||
Sbjct 1370 TCCATCAAGATTCACGACTCACAATCATACATCGTGACCTCAAAGCGGGTAACATCCTCT 1429
Query 1476 TGGACGCGGATATGAATCCTAAAA-TTGCAGATTTTGGAATGGCTAGGATCTTT-GGATT 1533
||||||| |||||||| || |||| ||||||||||||||||||| ||||| ||| | | |
Sbjct 1430 TGGACGCTGATATGAA-CCCAAAAGTTGCAGATTTTGGAATGGCGAGGAT-TTTCGAAAT 1487
Query 1534 GGACCAAACCGAAGAGAACACAAGCAGAATAGTTGGTACCTATGGTTACATGTCTCCCGA 1593
||||||||| |||| | || || ||| |||| || |||||||||||||||||||||||
Sbjct 1488 GGACCAAACAGAAGCCCATACGAGAAGAGTAGTCGGAACCTATGGTTACATGTCTCCCGA 1547
Query 1594 GTATGCAATGCATGGTCAGTACTCAATGAAATCTGATGTCTATAGCTTCGGAGTGTTAGT 1653
|||||| ||| |||| || | ||||||||||||||||| |||||||||||||| |||||
Sbjct 1548 GTATGCGATGTATGGCCAATTTTCAATGAAATCTGATGTTTATAGCTTCGGAGTCTTAGT 1607
Query 1654 TCTTGAGATTATAAGTGGCAAGAAGAATAGCAGCTTCTACCAAACAGATGGT-GCA-CAT 1711
||||||||| ||||| || ||||| || |||||| |||| || | |||| | | |
Sbjct 1608 TCTTGAGATAATAAGCGGGAAGAAAAACAGCAGCCTCTATCAGATGGATGCTAGTTTCG- 1666
Query 1712 GA--CTTGGTCT-CATATGCTTGGGGGCTTTGGAGTAACGGG-CGACCATTAGAACTCGT 1767
|| |||||| | ||||| ||||| | || |||||| ||||| | |||| |||| |||||
Sbjct 1667 GAAACTTGGT-TACATATACTTGGAGACTATGGAGTGACGGGTC-ACCACTAGAGCTCGT 1724
Query 1768 GGATCCAG-C-TATTGTAGAAAATTGCCAAAGGAATGAAGTTGTTCGATGTGTCCATATC 1825
|||| | | | | || |||| |||| ||||| || ||||| || |||| |||||||
Sbjct 1725 GGATTC-GTCCT-TTCTAGAGAATTATCAAAGAAACGAAGTAATTAGATGCATCCATATT 1782
Query 1826 GGTCTT-TTATGTGTTCAAGAAGATCCTG 1853
| | || |||||||| ||||||||| |||
Sbjct 1783 GCT-TTATTATGTGTCCAAGAAGATACTG 1810
> Ahg492542 jgi|Araly1|492542|fgenesh2_kg.7__1975__AT4G23260.1
Length=1990
Score = 499 bits (270), Expect = 3e-140
Identities = 605/762 (79%), Gaps = 41/762 (5%)
Strand=Plus/Plus
Query 1140 ATGGGACTGAAGTTGCGGTGAAGCGACTATC-AAAGTCATCAGGACAAGGTGAAGTAGAG 1198
|||| |||||| ||||||| ||| || | || ||| |||||||||||||||||||||||
Sbjct 1068 ATGGCACTGAAATTGCGGTAAAGAGATTGTCGAAA-ACATCAGGACAAGGTGAAGTAGAG 1126
Query 1199 TTCAAGAACGAGGTTGTTCTTGTTGCAAAGCTACAACATAGAAATCTGGTTAGACTTCTT 1258
|||||||||||||||||| ||||||||||||| ||||| | |||||| |||||||||||
Sbjct 1127 TTCAAGAACGAGGTTGTTGTTGTTGCAAAGCTTCAACACATAAATCTCGTTAGACTTCTC 1186
Query 1259 GGGTTTT-GTCTAGACGGAGAAGAAAGAGT-ACTGGTCTACGAGTATGTGCCCAACAAAA 1316
|| |||| | ||| | |||||||| | ||| ||| || || |||| ||| | |||||||
Sbjct 1187 GGTTTTTCG-CTACAAGGAGAAGAGA-AGTTACTCGTATATGAGTTTGTTTCAAACAAAA 1244
Query 1317 GTCTTGATTACTTCCTCTTTGACCCTGC-AA-AGAAAGGCCAGCTGGATTGGAC--T-CG 1371
| || ||||| ||||||||||| ||| | || ||||| | || |||| ||||| | ||
Sbjct 1245 GCCTCGATTATTTCCTCTTTGATCCTACGAAGAGAAAT-C-AGTTGGACTGGACAATGCG 1302
Query 1372 ACGATACAAGATTATCGGTGG-AGTTGCTCGAGGGATTCTGTATCTTCATCAAGACTCAC 1430
||| ||| || |||||||| | || ||||||||||| | |||||||||||||| ||||
Sbjct 1303 ACG---CAATATCATCGGTGGGA-TTACTCGAGGGATTTTATATCTTCATCAAGATTCAC 1358
Query 1431 GACTCACA-ATCATACACCGTGACCTCAAAGCCAGTAACATTCTCTTGGACGCGGATATG 1489
| || | | |||||||| |||||||||||||| |||||||||||||| || || ||||||
Sbjct 1359 GGCTGA-AGATCATACATCGTGACCTCAAAGCGAGTAACATTCTCTTAGATGCTGATATG 1417
Query 1490 AATCCTAAAATTGCAGATTTTGGAATGGCTAGGATCTTTGGATTGGACCAAACCGAAGAG 1549
||||| |||||||| |||||||||||||| |||||||||||| |||||||||| | ||
Sbjct 1418 AATCCGAAAATTGCTGATTTTGGAATGGCAAGGATCTTTGGAGTGGACCAAACTGTAGCC 1477
Query 1550 AACACAAGCA-GAATAGTTGGTACCTAT-GGTTACATGTCTCCCGAGTATGCAATGCATG 1607
|| ||| ||| || ||||||| |||| | |||||||||||||||||||||| | ||||
Sbjct 1478 AATACA-GCAAGAGTAGTTGGAACCT-TCGGTTACATGTCTCCCGAGTATGTGACACATG 1535
Query 1608 GTCAGTACTCAATGAAATCTGATGTCTATAGCTTCGGAGTGTT-AGTTCTTGAGATTATA 1666
| || | ||| |||||||| ||||| |||||||| ||||| || | |||||||||| ||
Sbjct 1536 GCCAATTCTCGATGAAATCAGATGTGTATAGCTTTGGAGTATTGA-TTCTTGAGATCATT 1594
Query 1667 AGTGGCAAGAAGAATAGCAGCTTCTACCAAACAGATGGTGCACATGAC--TTG-GTCTCA 1723
|||||||| |||||||||||||||||||| | |||||| | | || || ||| ||
Sbjct 1595 AGTGGCAAAAAGAATAGCAGCTTCTACCAGATGGATGGTTTAGTTAACAATTTAGTCACA 1654
Query 1724 TATG-CTTGGGGGCTTTGG-AGTAACGGGCGACCATT--A-GAACTCGTGGATCCAGCTA 1778
|||| || || |||||| || ||| | |||| | || ||| | ||||| | ||
Sbjct 1655 TATGTCT-GGAAACTTTGGGAG-AACAA---ATCATTGCATGAGCTCATAGATCCCGTTA 1709
Query 1779 TTGTAGAAAATTGCCAAAG-GAATGAAGTTGTTCGATGTGTCCATATCGGTCTTTTATGT 1837
| |||| |||| |||| || |||||| || ||| | ||||| || || ||||||
Sbjct 1710 TCAAAGAAGATTGTAAAAGCGA-TGAAGTCATTAGATACATTCATATTGGGCTGTTATGT 1768
Query 1838 GTTCAAGAAGATCCTGCTGAGCGTCCGACGTTGTCAACCATT 1879
||||||||| ||||||| || ||||| || |||| || |||
Sbjct 1769 GTTCAAGAAAATCCTGCAGATCGTCCAACAATGTCTACTATT 1810
> Ahg489975 jgi|Araly1|489975|fgenesh2_kg.6__3109__AT4G11480.1
Length=1881
Score = 414 bits (224), Expect = 1e-114
Identities = 612/797 (77%), Gaps = 35/797 (4%)
Strand=Plus/Plus
Query 1087 TAATAAGATTGGTCAAGGTGGATTTGGTGAGGTTTACAAGGGTACT-TTATCGGATGGGA 1145
||| ||| | |||||||||||||| || || ||| ||||| | | ||| | || |
Sbjct 975 TAACAAGCTAGGTCAAGGTGGATTCGGCGAAATTTTTAAGGG-AATATTACCAAATCAAA 1033
Query 1146 CTGAAGTTGCGGTGAAGCGACTATC-A-AAGTCATCAGGACAAGGTGA-AGTAGAGTTCA 1202
| ||||||||||||||||| ||||| | || | ||||||||||| | | ||||||||
Sbjct 1034 CAGAAGTTGCGGTGAAGCGGCTATCGATAAAT--TCAGGACAAGG-CACACAAGAGTTCA 1090
Query 1203 AGAACGAGGTTGTTCTTGTTGCAAAGCTACAACATAGAAATCTGGTTAGACTTCTTGGGT 1262
||||||||||||| |||| || ||||| ||||| || ||||| ||||| ||||||||||
Sbjct 1091 AGAACGAGGTTGTAATTGTGGCTAAGCTTCAACACAGGAATCTTGTTAGGCTTCTTGGGT 1150
Query 1263 TTTGTC-TAGACGGAGAAGAA-AGAGTACTGGTCTACGAGTATGTGCCCAACAAAAGTCT 1320
|||| | |||| || | ||| ||| |||| |||||||||| ||| ||||||| || ||
Sbjct 1151 TTTG-CTTAGAAAGATATGAACAGA-TACTTGTCTACGAGTTTGTTTCCAACAAGAGCCT 1208
Query 1321 TGATTACTTCCTCTTTGACCCTGCAAAGAAAG-GCCAGCTGGATTGGACTCGACGATACA 1379
| | || ||||||||||| || ||||| ||| | ||||| ||||||| |||||||
Sbjct 1209 TAACTATTTCCTCTTTGATCCAACAAAG-AAGAGTCAGCTAGATTGGAAAATACGATAC- 1266
Query 1380 AG-ATTATCGG-TGGAGTTGCTCGAGGGATTCTGTATCTTCATCAAGACTCACGACTCAC 1437
|| || || || ||| || | |||||| |||| ||||||||||||||||| || |||||
Sbjct 1267 AGCATCATTGGAGGGA-TTACGCGAGGGCTTCTCTATCTTCATCAAGACTCGCGGCTCAC 1325
Query 1438 AATCATACACCGTGACCTCAAAGCCAGTAACATTCTCTTGGACGCGGATATGAATCCTAA 1497
|| |||||||||||| ||||||| ||||||||||| || || || |||||||| |||||
Sbjct 1326 CATTATACACCGTGACATCAAAGCAAGTAACATTCTTTTAGATGCCGATATGAACCCTAA 1385
Query 1498 AATTGCAGATTTTGGAATGGCTAG-GATCTTTGGATTGGACCAAACCGAAGAGAACACAA 1556
||| || ||||| ||||| || || || ||| | |||||||||| ||||| || |||
Sbjct 1386 AATAGCGGATTTCGGAATCGCAAGAAAT-TTTAGCGTGGACCAAACTGAAGACAATACAG 1444
Query 1557 GCAGAATAGTTGGTACCTAT-GGTTACATGTCTCCCGAGTATGCAATGCATGGTCAGTAC 1615
| ||| | ||||| || | | ||||||||| |||| ||||||| | ||| || || | |
Sbjct 1445 GAAGAGTTGTTGGAACAT-TCGGTTACATGCCTCCAGAGTATGTGACGCACGGCCAATTC 1503
Query 1616 TCAATGAAATCTGATGTCTATAGCTTCGGAGTGTTAG-TTCTTGAGATTATAAGTGGCAA 1674
|| | ||||||||||| |||||||| ||||| || | |||| |||||||| |||||||
Sbjct 1504 TCTACCAAATCTGATGTTTATAGCTTTGGAGTATT-GATTCTGGAGATTATTTGTGGCAA 1562
Query 1675 GAAGAATAGCAGCTTCTACCAAACAGATGGTGCACATGAC--TT-GGTCTCATATGCTTG 1731
||||||||||||||||||||| | | || | | || | || ||| || ||| |||
Sbjct 1563 GAAGAATAGCAGCTTCTACCAGATGGCTGATTCTGGTGGCAATTTGGTGACACATGTTTG 1622
Query 1732 GGGGCTTTGGAGTAACGGG-CGACCATTAGAACTCGTGGATCCAGCTATTGTAGAAAAT- 1789
| ||||||||| |||| | ||| ||||| ||| | || || || ||| || |||
Sbjct 1623 GAGGCTTTGGAACAACGCTTC-ACCCTTAGATCTCATAGACCCCGCGATTA-AGGAAAGC 1680
Query 1790 TGCCA-AAGGAATGAAGTTGTTCGATGTGTCCATATCGGTCTTTTATGTGTTCAAGAAGA 1848
| | | || || || ||| || ||||| | |||||||| ||||||||||||||||| |
Sbjct 1681 TACGATAATGA-TGTAGTCATTAGATGTATACATATCGGAATTTTATGTGTTCAAGAA-A 1738
Query 1849 -TCCTGCTGAGCGTCCG 1864
||| || || ||||||
Sbjct 1739 CTCCGGCAGATCGTCCG 1755
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 82236838955
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5