BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G23210.3 Length=2261 Score E Sequences producing significant alignments: (Bits) Value Ahg492544 jgi|Araly1|492544|fgenesh2_kg.7__1977__AT4G23210.2 1332 0.0 Ahg889845 jgi|Araly1|889845|Al_scaffold_0007_1831 342 6e-93 Ahg492548 jgi|Araly1|492548|fgenesh2_kg.7__1981__AT4G23130.2 342 6e-93 Ahg889847 jgi|Araly1|889847|Al_scaffold_0007_1833 254 3e-66 > Ahg492544 jgi|Araly1|492544|fgenesh2_kg.7__1977__AT4G23210.2 Length=2189 Score = 1332 bits (721), Expect = 0.0 Identities = 833/886 (94%), Gaps = 12/886 (1%) Strand=Plus/Plus Query 62 ATGAAGCAGAGGAGTTTATTATCAATCCTCTGTTTTATCCTTCTAGCCTCTGGTGTTGCT 121 ||||||||||||||||| |||||||||||||||||| |||||||| ||| |||||||||| Sbjct 1 ATGAAGCAGAGGAGTTTCTTATCAATCCTCTGTTTTGTCCTTCTAACCTTTGGTGTTGCT 60 Query 122 TCTGTTTCAGCACAAACATGCATAGAGAACCGTAAATATTTCACACCCAACGGTACATAC 181 |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| Sbjct 61 TCTGTTTCAGCACAAACATGCATACAGAACCGTAAATATTTCATACCCAACGGTACATAC 120 Query 182 GATTCAAATCGTCGTCTTATCCTCTCTTCTCTTCCTAACAATACCGCGTCTCGAGATGGT 241 ||||||||||||| |||| |||||||| |||||||||||||||||||||||| ||||||| Sbjct 121 GATTCAAATCGTCTTCTTCTCCTCTCTACTCTTCCTAACAATACCGCGTCTCAAGATGGT 180 Query 242 TTCTACTACGGTTCCATTGGAGAAGAGCAAGATCGAGTCTACGCATTAGGGATGTGCATC 301 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 181 TTCTACTACGGTTCTATTGGAGAAGAGCAGGATCGAGTCTACGCATTAGGGATGTGCATC 240 Query 302 CCGAA-ATCAACTCCAAGTGATTGTTCTAACTGTATCAAGGGCGCGGCAGGCTGGTTGAT 360 || || ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct 241 CC-AAGATCAACTCCAAGTGACTGTTCTAATTGTATCAAGGGCGCGGCAGGCTGGTTGAT 299 Query 361 ACAGGATTGTGTCAACCAGACAGACGCGTACTATTGGGCACTTGATCCAACGCTGTGCCT 420 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 300 ACAGGATTGTGTCAACCAGACAGACGCGTATTATTGGGCACTTGATCCAACGCTGTGCCT 359 Query 421 TGTCCGCTACTCCAACATTTCTTTCTCAGGATCTGCAGCTTTTTGGGAGATTG-AGCCGC 479 |||||||||||||||||||||||||||||||||||||||||||||||| | | | |||| Sbjct 360 TGTCCGCTACTCCAACATTTCTTTCTCAGGATCTGCAGCTTTTTGGGAAACTACA-CCGC 418 Query 480 AGTATTTGGTGTTGAACACTGCAACTATCGCCTCAAATCTAACAGAGTTCAAGACAATAT 539 |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 419 AGTATTTGGTCTTGAACACTGCAACTATCGCCTCAGATCTAACAGAGTTCAAGACAATAT 478 Query 540 GGGAAGACTTAACATCTCGTACGATTACTGCAGCCTCCGCAGCAAGAAGCACACCATCGT 599 ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||| | Sbjct 479 GGGAAGACTTAACATCTCGTATGATTACTGCAGCCTCCGCAGCAAGAAGAACACCATCAT 538 Query 600 CCAGTGATAACCATTACAGAGTTGATTTTGCGAACTTGACAAAATTCCAGAATATCTACG 659 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 539 CCAGTGACAACCATTACAGAGTTGATTTTGCGAACTTGACAAAATTCCAGAATATATATG 598 Query 660 CATTGATGCAATGCACGCCAGATATTTCTTCTGACGAATGTAACAACTGTCTCCAACGAG 719 |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 599 CATTAATGCAATGCACGCCAGATATTTCTTCTGACGAATGTAACAGCTGTCTCCAACAAG 658 Query 720 GCGTACTTGAGTACCAGTCATGCTGTGGAAATAATACTGGAGGCTATGTTATGCGGCCAA 779 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 659 GCGTACTTGAGTACCAGTCATGCTGTGGAAATAATACAGGAGGCTATGTTATGCGGCCAA 718 Query 780 TCTGCTTTTTCCGGTGGCAGCTTTTTACATTCTCTAAGGCTTTTCATAACATTACCTTGG 839 |||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 719 TCTGCTTTTTTCGGTGGCAGCTTTTTACATTCTCTAAGGCTTTTGATAACATTACCCTGG 778 Query 840 CTACTACTCCT-C-C-TC-T-TT-CTCCTCCTCCACTGCAACGTCCTGTGGTTGCGTCAC 893 ||||| ||||| | | || | || |||||||||||||||||||||||||||||||||||| Sbjct 779 CTACTCCTCCTTCTCCTCCTCTTTCTCCTCCTCCACTGCAACGTCCTGTGGTTGCGTCAC 838 Query 894 AACCACCTTCTGC-AGACAACCGGGACAAGAAGAGAGACAATAGTA 938 ||||||||||||| | | ||||| ||||| | ||||||||||| Sbjct 839 AACCACCTTCTGCCA-AGGACCGGCCCAAGACTACAGACAATAGTA 883 Score = 1243 bits (673), Expect = 0.0 Identities = 1093/1289 (85%), Gaps = 56/1289 (4%) Strand=Plus/Plus Query 941 GGAAAAATCTCAATGAAAACTATTCTAGCAATTGTTGTGGTTGGTATAGTCATCCTCATC 1000 ||||| |||||||||||||||||| |||||||||||||||||| | ||||||| | || Sbjct 928 GGAAATATCTCAATGAAAACTATTGTAGCAATTGTTGTGGTTGTTGTAGTCAT--T-GTC 984 Query 1001 ATCATCTCGGGAATTCTTGCTCGCCGGTTTGCTCGG-AAGGAAAAACCATATCAAGAAGT 1059 ||||||| || | |||| ||| |||||||||||||| |||| |||||||||||||||||| Sbjct 985 ATCATCTTGGCACTTCTCGCTTGCCGGTTTGCTCGGAAAGG-AAAACCATATCAAGAAGT 1043 Query 1060 TGAACTTAATCAAACTGGTATTACATCTGTACGCTCCCTGCAATACAAATTTAAGACGAT 1119 ||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| Sbjct 1044 TGAACTTAATCAAACTGGTATTACAACTGTACGGTCCCTGCAATATAAATTTAAGACGAT 1103 Query 1120 CGAAA-CTGCAACAAATAATTTTTCAGAGAGACTTGGTCATGGTGGATCTGGACA-TGTT 1177 | ||| |||||||||| || |||||||| | | | || || ||||||| |||| | |||| Sbjct 1104 C-AAATCTGCAACAAAGAAATTTTCAGACAAAATCGGCCAAGGTGGATTTGGA-AGTGTT 1161 Query 1178 TTCAAGGGAAGGTTGCCTGACGGAAAGGAAATTGCAGTGAAGAGATTGTCAGAAA-AAAC 1236 |||||||| | ||||||||| ||||| ||||||||||||||||| |||||| ||| | | Sbjct 1162 TTCAAGGGTATGTTGCCTGATGGAAAAGAAATTGCAGTGAAGAGGTTGTCA-AAATCATC 1220 Query 1237 AGAACAAAGTAAGAAAGAGTTCAAGAACGAGGTTGTTCTTGTCGCGAAACTTCAGCATAG 1296 |||||| || |||||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct 1221 CGAACAAGGTGAGAAAGAGTTCAAGAACGAGGTTGTTGTTGTCGCAAAACTTCAGCATAG 1280 Query 1297 AAATCTTGTTAGACTTCTCGGTTTTTCTGTCAAAGGAGAAGAAAAGAT-CATAGTCTACG 1355 |||||||||||||||||||||||||||||||||||||||||||||||| | | || |||| Sbjct 1281 AAATCTTGTTAGACTTCTCGGTTTTTCTGTCAAAGGAGAAGAAAAGATAC-TCGTGTACG 1339 Query 1356 AGTATT-TGCCCAACAGAAGTCTCGACTACATCCTCTT-TGACCCTACAAAGCAAGGAGA 1413 ||| || ||||||||| |||||| || | |||| || |||||||| ||||||| |||| Sbjct 1340 AGT-TTGTGCCCAACAAAAGTCTTGATTGTTTCCT-TTCTGACCCTATAAAGCAAAGAGA 1397 Query 1414 GTTAGACTGGAAAAAGCGGTACAAGATCATTGGAGGAACTGCTAGAGGGATTCTATATCT 1473 ||||||||||| || |||| |||||||||||||||||| |||||||||||||| |||||| Sbjct 1398 GTTAGACTGGACAAGGCGGCACAAGATCATTGGAGGAATTGCTAGAGGGATTCAATATCT 1457 Query 1474 TCATCAAGATTCACA-ACCCACAATCATACATCGTGACCTCAAAGCGGGTAATATCCTCT 1532 |||||| | ||||| | | | |||||||||||||||||||||||||| || || |||| Sbjct 1458 TCATCATGGTTCACGGATCAA-AATCATACATCGTGACCTCAAAGCGGAAAACATACTCT 1516 Query 1533 TGGACGCTCATATGAACCCGAA-AGTTGCAGATTTTGGGACGGCAAGGATCTTTGGGATG 1591 |||| | | |||||||||| || | || | |||||||| | ||||||||||||||| ||| Sbjct 1517 TGGATGGTGATATGAACCCCAAGATTT-CTGATTTTGGAATGGCAAGGATCTTTGGAATG 1575 Query 1592 GACCAAAGT-GTAGCTATTACAGCGAATGCA--GCCGGAACTCCCGGTTACATGGCCC-- 1646 ||||||| | | ||||| ||| ||| | | | |||||| | | | || | Sbjct 1576 GACCAAACTAG-AGCTAACACAA-GAAGG-ATTGTTGGAACTGA-G-TAAAATTAATCTT 1630 Query 1647 -CAGAA-T-ATATGGAACTAG-GCG-AA-TTCTCGATGAAATCTGACGTGTATAGCTATG 1700 |||| | ||||| | || | || ||||| ||||||||||| ||||||||||||| Sbjct 1631 GCAGAGGTTATATGCCCCCAGAGTATAAATTCTCAATGAAATCTGATGTGTATAGCTATG 1690 Query 1701 GGGTCTTAGTTCTTGAGATTATATGCGGCAAGAGGAACACGAGCTTCT-CATCTCCGGTT 1759 | ||||||||||||||||||||||||||||||| ||||| || ||||| | |||| | | Sbjct 1691 GAGTCTTAGTTCTTGAGATTATATGCGGCAAGAAGAACAGGAACTTCTGCC-CTCCAGCT 1749 Query 1760 C-AGAATTTTGTCACATATGTCT-GGAGGTTATGGAAA-AGCGGGACACCATTA-AACCT 1815 | | ||||| ||||||| || || |||||||||||| | | |||| |||||||| ||| | Sbjct 1750 CCA-AATTTGGTCACATTTG-CTTGGAGGTTATGGAGAGA-CGGGGCACCATTAGAAC-T 1805 Query 1816 CGTTGA-CGCAACAATTGCAGAGAATTATA-AGAGTGAAGAAGTGATAAGATGTATCCAC 1873 ||| || | ||| |||| ||||||||| | | | || |||||||||||||| |||||| Sbjct 1806 CGTGGATC-CAATAATTTCAGAGAATTGTCCA-ACCGATGAAGTGATAAGATGCATCCAC 1863 Query 1874 ATTGCGCTCCTATGTGTTCAAGAAGAACCTACAGATCGTCCTGACTTTTCGATAATCATG 1933 ||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct 1864 ATTGCGCTCTTATGTGTTCAAGAAGATCCTACAGATCGTCCCGACTTTTCGATAATCATG 1923 Query 1934 TCGATGCTCACTAGCAATTCCCTCATCTTACCTGTTCCTAAACCACCTCCATCCTTCATT 1993 ||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||||| Sbjct 1924 TCGATGCTCACTAGCAATTCCGTCATCTTACCTGTTCCTGAACCACCTGGATTCTTCATT 1983 Query 1994 CCAGGTAGACCAAACCAATCTACGACGAGGCCCAGTTCCCAAAATATCAATGATGGAAGG 2053 || || || |||||||||||||| |||| ||| |||||||| ||||||||||| || Sbjct 1984 TCAAATACACAAAACCAATCTACGAGGAGGTCCAATTCCCAAACTATCAATGATGAAACT 2043 Query 2054 TGGTCCTTGTTGAAAATGATGTTCCATTGAGACATTGGAACTTGTT-TGAAGTAAACTAT 2112 || |||| | |||| ||||||||||||||| |||||| |||| ||| | ||||||||||| Sbjct 2044 TGATCCTCGCTGAAGATGATGTTCCATTGAAACATTGAAACT-GTTGT-AAGTAAACTAT 2101 Query 2113 GTTTT-TGGTATTTCAGTTTAAACTGTTATGAATTATTCATAAAGTTATGTATGTGTAAA 2171 |||| |||||||||||||| |||||| |||||||||||| ||||||||||||||||||| Sbjct 2102 ATTTTCTGGTATTTCAGTTTGAACTGTAATGAATTATTCA-AAAGTTATGTATGTGTAAA 2160 Query 2172 TTGTGAGATACTCATCAAAGTAGTTATGT 2200 ||||||||||||||||||||||||||||| Sbjct 2161 TTGTGAGATACTCATCAAAGTAGTTATGT 2189 > Ahg889845 jgi|Araly1|889845|Al_scaffold_0007_1831 Length=1983 Score = 342 bits (185), Expect = 6e-93 Identities = 487/625 (78%), Gaps = 52/625 (8%) Strand=Plus/Plus Query 1100 CAATACAAATTT-AAGACGA-TCGAAACTGCAACAAATAATTTTTCAG-AGAG-----A- 1150 |||| | ||||| ||| | | || || ||||||||||||| ||||||| |||| | Sbjct 958 CAATTCGAATTTAAAG-CTATTC-AAGCTGCAACAAATAA-TTTTCAGAAGAGTAACAAG 1014 Query 1151 CTTGGTCATGGTGGATCTGGACATGTTTTCAAGGGAAGGTTGCCTG-ACGGAA-AGGAAA 1208 || ||||||||||||| ||| | |||| |||||||| ||| || | | |||| | ||| Sbjct 1015 CTAGGTCATGGTGGATTTGGTGAAGTTTACAAGGGAACGTTTCC-GAATGGAACA-GAAG 1072 Query 1209 TTGCAGTGAAGAGATTGTCAGAAAA-AACAGAACAAAGT-AAGAAAGAGTTCAAGAACGA 1266 |||| |||||||| |||| |||| ||| ||| || || ||||||| |||||||| Sbjct 1073 TTGCTGTGAAGAGGCTGTC-TAAAACTTCAGGTCAAGGTGAA-CAAGAGTTTAAGAACGA 1130 Query 1267 GGTTG-TTCTTGTCGCGAAA-CTTCAGCATAGAAATCTTGTTAGACTTCTCGGTTTTTCT 1324 || || ||||||| || ||| || || ||||||||||| |||||||||||||| || ||| Sbjct 1131 GG-TGCTTCTTGTAGC-AAAGCTCCAACATAGAAATCTCGTTAGACTTCTCGGGTTCTCT 1188 Query 1325 GTCAAAGGAGAAGAAAAGATCA-TAGTCTACGAGTATT-TGCCCAACAGAAGTCTCGACT 1382 ||| |||||||||||||||| | | |||||||||| || ||| ||| | |||||| |||| Sbjct 1189 GTCGAAGGAGAAGAAAAGAT-ACTTGTCTACGAGT-TTGTGCACAATAAAAGTCTTGACT 1246 Query 1383 ACATCCTCTTTGACCCTACAAAGCAAGGAG---AGTTAGACTGGA-AAAAGCGGTACAAG 1438 || |||||||||||||| |||| ||| | | || || |||| |||| || || || Sbjct 1247 ACTTCCTCTTTGACCCTGTAAAG--AGGGGTCAACTT-GATTGGAGAAAA-CGCTATAAC 1302 Query 1439 ATCATTGGA-GGAACTGCTAGAGGGATTCTATATCTTCATCAAGATTCACAACCCACAAT 1497 || | | || |||| | || |||||||| ||||||||||||||||||||| | |||||| Sbjct 1303 ATTA-TCGAGGGAATTACTCGAGGGATTTTATATCTTCATCAAGATTCACGGCTCACAAT 1361 Query 1498 CATACATCGTGACCTCAAAGCGGGTAATATCCTCTTGGACGCTCATATGAACCCGAAAGT 1557 |||||||||||||||||||||| |||| || || ||||| || |||||||||||||| | Sbjct 1362 CATACATCGTGACCTCAAAGCGAGTAACATTCTATTGGATGCAGATATGAACCCGAAAAT 1421 Query 1558 TGCAGATTTTGGGACGGCAAGGATCTTTGGGA-TGGACCAAAGTGTAG-CTATTACAGCG 1615 ||||||||||| | |||||||| ||| || ||||||| | || || | || |||| | Sbjct 1422 CGCAGATTTTGGAATGGCAAGGAA-TTTCAGAGTGGACCAGACTGAAGACAAT-ACAG-G 1478 Query 1616 AAT-GCAGCCGGAAC-TCCCGGTTACATGGC-CCCAGAATATATGG--AACTAGGCGAAT 1670 || | || ||||| | ||||||||| | ||| || ||| ||| || | ||| | | Sbjct 1479 AAGAGTAGTTGGAACATTT-GGTTACATGCCTCCC-GAGTATGTGGCGAA-TGGGC-AGT 1534 Query 1671 TCTCGATGAAATCTGACGTGTATAG 1695 |||||||||||||||| || ||||| Sbjct 1535 TCTCGATGAAATCTGATGTTTATAG 1559 > Ahg492548 jgi|Araly1|492548|fgenesh2_kg.7__1981__AT4G23130.2 Length=2044 Score = 342 bits (185), Expect = 6e-93 Identities = 489/628 (78%), Gaps = 51/628 (8%) Strand=Plus/Plus Query 1150 ACTTGGTCATGGTGGATCTGGACATGTTTTCAAGGG-A-AGGTTGCCTGACGGA-AAGGA 1206 ||| ||||| ||||||| |||||| |||| |||||| | | || || | ||| | | Sbjct 1047 ACTCGGTCAAGGTGGATTTGGACAAGTTTACAAGGGCATA-CTT-TCTAATGGATTA-CA 1103 Query 1207 AATTGCAGTGAAGAGATTGTCAGAAAA-AACAGAACAAAGT-AAGAAAGAGTTCAAGAAC 1264 | |||| ||||||||| | || ||||| | ||| |||| || || ||||||||||||||| Sbjct 1104 AGTTGCGGTGAAGAGACTATC-GAAAACATCAGGACAAGGTGAA-AAAGAGTTCAAGAAC 1161 Query 1265 GAGGTTGTTCTTGTCGCGAAA-CTTCAGCATAGAAATCTTGT-TAGACTTCTCGGTTTTT 1322 || |||||| |||| || ||| |||||||| ||||||||||| || ||||| || |||| Sbjct 1162 GAAGTTGTTGTTGTGGC-AAAGCTTCAGCACAGAAATCTTGTCAAG-CTTCTTGGATTTT 1219 Query 1323 CTGTCA-A-AGGAGAAGA-AAAGATCA-TAGTCTACGAGTATT-TGCCCAACAGAAGTCT 1377 | | | | ||| ||||| ||| || | | |||||||||| || || | || | |||||| Sbjct 1220 GT-TTAGAGAGG-GAAGAGAAA-AT-ACTTGTCTACGAGT-TTGTGTCTAATAAAAGTCT 1274 Query 1378 CGACTACATCCTCTTTGACCCTACAAAGCAAGGAG--AGTTAGACTGGA--AAAAGCGGT 1433 || ||| || | ||||| ||| || || | ||| || |||| |||| | || ||| Sbjct 1275 TGATTACTTCTTGTTTGATTCTAGAATGC-A-GAGCCAGCTAGATTGGACTACAA--GGT 1330 Query 1434 ACAAGATCATTGGAGGAACTGCTAGAGGGAT-TCTATATCTTCATCAAGATTCACAACCC 1492 | |||||||| ||||||| ||||||||| || | | ||||| ||||||||||||| || | Sbjct 1331 ATAAGATCATAGGAGGAATTGCTAGAGGAATAT-TGTATCTCCATCAAGATTCACGACTC 1389 Query 1493 ACAATCATACATCGTGACCTCAAAGCGGGTAATATCCTCTTGGACGCTCATATGAACCCG 1552 |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 1390 ACAATCATACATCGTGACCTCAAAGCGGGTAACATCCTCTTGGACGCTGATATGAACCCA 1449 Query 1553 AAAGTTGCAGATTTTGGGACGGCAAGGATCTTTGGGA-TGGACCAAAGTGTAGCT-ATTA 1610 ||||||||||||||||| | ||| ||||| ||| | | ||||||||| | ||| || | Sbjct 1450 AAAGTTGCAGATTTTGGAATGGCGAGGAT-TTTCGAAATGGACCAAACAGAAGCCCAT-A 1507 Query 1611 CAGCGAAT-GCAGCCGGAAC-TCCCGGTTACATGGC-CCCAGAATATATGGAACTA-GGC 1666 | | ||| | || |||||| | ||||||||| | ||| || ||| | | || ||| Sbjct 1508 C-GAGAAGAGTAGTCGGAACCTAT-GGTTACATGTCTCCC-GAGTATGCG-ATGTATGGC 1563 Query 1667 GAATTCTCGATGAAATCTGACGTGTATAGCTATGGG-GTCTTAGTTCTTGAGATTATATG 1725 |||| || ||||||||||| || ||||||| | || ||||||||||||||||| ||| | Sbjct 1564 CAATTTTCAATGAAATCTGATGTTTATAGCT-TCGGAGTCTTAGTTCTTGAGATAATAAG 1622 Query 1726 CGGCAAGAGGAACA-CGAGCTTCTCATC 1752 ||| |||| |||| | ||| ||| ||| Sbjct 1623 CGGGAAGAAAAACAGC-AGCCTCT-ATC 1648 > Ahg889847 jgi|Araly1|889847|Al_scaffold_0007_1833 Length=2025 Score = 254 bits (137), Expect = 3e-66 Identities = 495/661 (75%), Gaps = 52/661 (8%) Strand=Plus/Plus Query 1102 ATACAAATTTAAGACGATCGAAACTGCAACAAATAATTTTTC-A-GAG--A-GA-CTTGG 1155 |||| | |||||||| || ||| ||||||| || || ||||| | || | | ||||| Sbjct 1023 ATACGATTTTAAGACAATTGAAGCTGCAACTAACAAGTTTTCAACAAGTAATAAGCTTGG 1082 Query 1156 TCATGGTGGA-TCTGG-ACATGTTTTCAAGGG-AAGGTTGCCTGACGGAAAGGAAATTGC 1212 | | |||||| || || | |||| || ||| ||| || || | |||| ||| | || Sbjct 1083 TGAAGGTGGATTC-GGTGC-GGTTTACATGGGTAAGCTT-TCTAATGGAACTGAAGTAGC 1139 Query 1213 AGTGAAGAGATTGTCAGAAAAA-ACAGAACAAAGTAAGAA-AGAGTTCAAGAACGAGGTT 1270 || ||| || |||| |||||| ||| || ||| | || |||||||| ||| |||| | Sbjct 1140 TGTAAAGCGACTGTC-GAAAAAGTCAGGAC-AAGGCACAAGAGAGTTCAGGAATGAGGCT 1197 Query 1271 GTTCTTGTCG-CGAAACTTCAGCATAGAAATCTTGTTAGACTTCTCGG-TT-T-TTCTGT 1326 |||||||| | | |||||||| ||||| || || || || ||||| || || | || || Sbjct 1198 GTTCTTGT-GTCAAAACTTCAACATAGGAACCTGGTCAGGCTTCTTGGATTCTGTT-TG- 1254 Query 1327 CAAAGGAGAAGAAAAGA-TCATAG-TCTACGAGTATTTG-CC-CAACAGAAGTCTCGACT 1382 ||| |||| ||| ||| || | | | || ||| |||| || ||||| ||| || |||| Sbjct 1255 GAAA-GAGAGGAACAGATTC-T-GATTTATGAG--TTTGTCCACAACAAAAGCCTTGACT 1309 Query 1383 ACATCCTCTTTGACCCTACA-AAGCAAGGAGAGTTAGACTGGAAAAAGCGGTACAAGATC 1441 || | || || ||||| | |||||| | || ||||||||| | | |||| |||| Sbjct 1310 ACTTTCTATTCGACCC-GGAGAAGCAAAGTCAGCTAGACTGGACCCGGAGATACAGGATC 1368 Query 1442 ATTGGAGGAACTGCTAGAGGGATTCTATATCTTCATCAAGATTCACAACCCACAATCATA 1501 |||||||| | ||||||||||||||||||||||||||||||||||| | || ||||||| Sbjct 1369 ATTGGAGGGATTGCTAGAGGGATTCTATATCTTCATCAAGATTCACGGCTCAAAATCATA 1428 Query 1502 CATCGTGACCTCAAAGCGGGTAATATCCTCTTGGACGCTCATATGAACCCGAAAGTTGCA 1561 |||||||||||||||||| | || || ||||| || || ||||||| |||||| |||| Sbjct 1429 CATCGTGACCTCAAAGCGAGCAACATTCTCTTAGATGCGGATATGAATCCGAAAATTGCT 1488 Query 1562 GATTTTGGGAC-GGCAAGGATCTTTGGGATGGACCAAAGTGTAGCTATTAC-AGC-GAAT 1618 |||||||| | ||||| || ||||| ||||| |||| | || | || | | |||| Sbjct 1489 GATTTTGG-ATTGGCAACTATTTTTGGAATGGAGCAAACTCAAGGAAACACGAACAGAAT 1547 Query 1619 GCAGCCGGAAC-TCCCGGTTACATGGC-CCCAGAATAT---ATGGAACTAGG-CGAATTC 1672 || ||||| | | | ||||||| | ||| || ||| ||| | | || | ||| | Sbjct 1548 T--GCTGGAACCTAC-GCTTACATGTCTCCC-GAGTATGCGATGCA--T-GGTC-AATAC 1599 Query 1673 TCGATGAAATCTGACGTGTATAGCTATGGGGTCTTAGTTCTTGAGATTATATGCGGCAAG 1732 || |||||||||||| | ||||||| ||| ||||||||||||||||||||| |||||||| Sbjct 1600 TCCATGAAATCTGACATTTATAGCTTTGGAGTCTTAGTTCTTGAGATTATAAGCGGCAAG 1659 Query 1733 A 1733 | Sbjct 1660 A 1660 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85131697575 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5