BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G23400.1
Length=1129
Score E
Sequences producing significant alignments: (Bits) Value
Ahg492536 jgi|Araly1|492536|fgenesh2_kg.7__1969__AT4G23400.1 1748 0.0
Ahg470115 jgi|Araly1|470115|fgenesh2_kg.1__69__AT1G01620.1 621 3e-177
Ahg943716 jgi|Araly1|943716|scaffold_604260.1 617 4e-176
Ahg934220 jgi|Araly1|934220|scaffold_402208.1 555 3e-157
Ahg928883 jgi|Araly1|928883|scaffold_301340.1 555 3e-157
Ahg896811 jgi|Araly1|896811|Al_scaffold_0005_777 555 3e-157
> Ahg492536 jgi|Araly1|492536|fgenesh2_kg.7__1969__AT4G23400.1
Length=1105
Score = 1748 bits (946), Expect = 0.0
Identities = 1054/1106 (95%), Gaps = 7/1106 (1%)
Strand=Plus/Plus
Query 27 TGGTGATAGAGTGAGAGAGAAACATGGAAGGCAAAGAAGAAGACGTCAATGTTGGAGCCA 86
|||||||||||||||||||||||||||| || |||||||||||||| ||||| |||||||
Sbjct 3 TGGTGATAGAGTGAGAGAGAAACATGGAGGGAAAAGAAGAAGACGTGAATGTCGGAGCCA 62
Query 87 ACAAGTTCCCAGAGAGACAGCCGATCGGTACGGCGGCTCAGACGGAGAGCAAGGACTATA 146
|||||||||| ||||| |||||||||||||||||||| ||||| |||||||||||||| |
Sbjct 63 ACAAGTTCCCGGAGAGGCAGCCGATCGGTACGGCGGCGCAGACAGAGAGCAAGGACTACA 122
Query 147 AGGAACCACCACCGGCGCCGTTTTTCGAACCCGGCGAGCTCAAATCTTGGTCTTTCTACA 206
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 123 AGGAACCACCTCCGGCGCCGTTTTTCGAACCCGGCGAGCTCAAATCTTGGTCTTTTTACA 182
Query 207 GAGCAGGGATAGCTGAGTTCATAGCCACTTTCCTTTTCCTCTACGTCACCGTTTTGACAG 266
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 183 GAGCAGGCATAGCTGAGTTCATAGCCACTTTCCTTTTCCTCTACGTCACCGTTTTGACAG 242
Query 267 TCATGGGTGTTAAGAGAGCTCCCAATATGTGTGCCTCTGTTGGAATCCAAGGCATCGCTT 326
||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 243 TCATGGGCGTTAAGAGAGCTCCTACTATGTGTGCCTCTGTTGGAATCCAAGGCATCGCTT 302
Query 327 GGGCTTTTGGTGGCATGATCTTTGCTCTTGTTTACTGTACTGCTGGAATCTCAGGAGGAC 386
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 303 GGGCTTTTGGTGGCATGATCTTTGCTCTTGTTTATTGTACTGCTGGAATCTCAGGAGGAC 362
Query 387 ATATTAATCCGGCGGTGACTTTTGGTTTGTTCTTGGCGAGGAAGCTATCTTTAACCAGAG 446
||||||||||||| |||||||||||||||||||||||||||||| | |||||||||||||
Sbjct 363 ATATTAATCCGGCAGTGACTTTTGGTTTGTTCTTGGCGAGGAAGTTGTCTTTAACCAGAG 422
Query 447 CTCTGTTCTACATAGTAATGCAGTGCCTTGGAGCTATATGTGGTGCTGGTGTGGTTAAAG 506
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 423 CTCTGTTCTACATAGTAATGCAGTGCCTTGGAGCTATTTGTGGTGCTGGTGTGGTTAAAG 482
Query 507 GGTTTCAACCAGGGCTGTACCAGACGAATGGCGGTGGAGCTAATGTGGTGGCTCATGGTT 566
|||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||
Sbjct 483 GGTTTCAACCAGGGCTTTACCAGACGAATGGCGGTGGAGCAAATGTGGTGGCTCATGGTT 542
Query 567 ACACAAAGGGTTCAGGTCTTGGTGCAGAGATTGTTGGAACTTTTGTTCTGGTTTACACTG 626
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 543 ACACAAAGGGTTCAGGTCTTGGTGCAGAGATTGTTGGAACTTTTGTTCTGGTTTACACTG 602
Query 627 TTTTCTCAGCTACTGATGCTAAGAGAAGTGCCAGAGACTCTCATGTCCCTATCTTGGCTC 686
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 603 TTTTCTCAGCTACTGATGCTAAGAGAAGTGCCAGAGACTCTCATGTCCCTATCTTGGCTC 662
Query 687 CGCTTCCAATTGGGTTTGCTGTCTTCTTGGTGCACTTGGCTACCATCCCAATTACTGGAA 746
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 663 CGCTTCCAATTGGGTTTGCTGTCTTCTTGGTGCACTTGGCTACCATCCCAATCACTGGAA 722
Query 747 CTGGCATTAACCCGGCCAGGAGTCTCGGAGCTGCCATCATCTACAACAAGGATCATGCTT 806
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 723 CTGGCATTAACCCGGCCAGGAGTCTCGGAGCTGCCATCATCTACAACAAGGGTCATGCTT 782
Query 807 GGGATGACCATTGGATCTTCTGGGTCGGTCCATTCATTGGTGCTGCGCTTGCTGCTCTGT 866
|||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 783 GGGATGACCATTGGATTTTCTGGGTCGGTCCATTCATCGGTGCTGCGCTTGCTGCTCTGT 842
Query 867 ACCATCAGATAGTCATCAGAGCTATTCCTTTCAAGTCCAAGACATAAAGTTTCCTACATA 926
||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||
Sbjct 843 ACCATCAGATAGTCATCAGAGCTATTCCTTTCAAGTCCAAGGCATAAAGCTTCCTACATA 902
Query 927 TTCTCTGATCATCATCAAGCTAAGAATATATCAATCTTT-AATTCTATATGCTTTCTTCT 985
|||| ||||||||||| |||||||||||||||||||||| ||| |||| | | || |||
Sbjct 903 TTCTGTGATCATCATCGAGCTAAGAATATATCAATCTTTCAAT-CTATGTACACTCCTCT 961
Query 986 TGTTTCCTATGTCA-T-GTGTGATGATCTCTATATGTACCACTAGAGCTTTGATCTTGTA 1043
||||||||||||| | |||||||||||||||||| ||||||| | |||| | |||||||
Sbjct 962 TGTTTCCTATGTCCCTTGTGTGATGATCTCTATATCTACCACTGGGGCTTGG-TCTTGTA 1020
Query 1044 ACAGTGTA-AATGTGTAATCTATTATGTATCAATGGCATTGTATCTTGTAACATTAATTA 1102
||| |||| || ||||||| ||||||||| || |||||||||||||||| ||||||||||
Sbjct 1021 ACATTGTATAA-GTGTAATTTATTATGTACCAGTGGCATTGTATCTTGTTACATTAATTA 1079
Query 1103 TGTCAATGGAAGAATACATTGTGTAC 1128
||||||||||||||||||||||||||
Sbjct 1080 TGTCAATGGAAGAATACATTGTGTAC 1105
> Ahg470115 jgi|Araly1|470115|fgenesh2_kg.1__69__AT1G01620.1
Length=1065
Score = 621 bits (336), Expect = 3e-177
Identities = 697/873 (80%), Gaps = 17/873 (2%)
Strand=Plus/Plus
Query 40 AGAGAGAAACATGGAAGGCAAAGAAGAAGACG-TCAATGTTGGAGCCAACAAGTTCCCAG 98
||||||| | |||||||| |||||||| || | || | || ||||| |||||||||||||
Sbjct 78 AGAGAGAGAGATGGAAGGGAAAGAAGAGGATGTTCGA-GTGGGAGCGAACAAGTTCCCAG 136
Query 99 AGAGACAGCCGATCGGTACGGCGGCTCAGACGGAGAGCAAGGACTATAAGGAACCACCAC 158
|||| || || || || ||| |||||||||| | || ||| ||||| ||||| |||||||
Sbjct 137 AGAGGCAACCCATAGGGACGTCGGCTCAGAC-G-GA-CAAAGACTACAAGGAGCCACCAC 193
Query 159 CGGCGCCGTTTTTCGAACCCGGCGAGCTCAAATCTTGGTCTTTCTACAGAGCAGGGATAG 218
| || || | ||||| || |||||||| | || ||||| ||||||||||| || || |
Sbjct 194 CAGCTCCACTGTTCGAGCCAGGCGAGCTGAGTTCATGGTCCTTCTACAGAGCCGGAATCG 253
Query 219 CTGAGTTCATAGCCACTTTCCT-TTTCCTCTACGTCACCGTTTTGACAGTCATGGGTGTT 277
| |||||||||||||| ||||| ||| || ||| |||| || |||||||| ||||| ||
Sbjct 254 CCGAGTTCATAGCCACATTCCTGTTT-CTATACATCACAGTATTGACAGTGATGGGAGTG 312
Query 278 AAGAGAGCTCCCAATATGTGTGCCTCTGTTGGAATCCAAGGCATCGCTTGGGCTTTTGGT 337
|||||||| || || ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 313 AAGAGAGCACCAAACATGTGTGCCTCTGTTGGAATCCAAGGCATTGCTTGGGCTTTTGGA 372
Query 338 GGCATGATCTTTGCTCTTGTTTACTGTACTGCTGGAATCTCAGGAGGACATATTAATCCG 397
|||||||||||||| ||||| |||||||||||||||||||| || ||||| || || ||
Sbjct 373 GGCATGATCTTTGCCCTTGTCTACTGTACTGCTGGAATCTCTGGTGGACACATAAACCCA 432
Query 398 GCGGTGACTTTTGGTTTGTTCTTGGCGAGGAAGCTATCTTTAACCAGAGCTCTGTTCTAC 457
|||||||| |||||| |||||||||| | || || || || || |||||| | ||||||
Sbjct 433 GCGGTGACATTTGGTCTGTTCTTGGCTCGTAAACTGTCATTGACGAGAGCTGTCTTCTAC 492
Query 458 ATAGTAATGCAGTGCCTTGGAGCTATATGTGGTGCTGGTGTGGTTAAAGGGTTTCAACCA 517
|| || ||||| || || ||||| || || || || || || || ||||| || || |||
Sbjct 493 ATCGTGATGCAATGTCTCGGAGCCATCTGCGGCGCCGGAGTTGTCAAAGGCTTCCAGCCA 552
Query 518 GGGC-TGTACCAGACGAAT-GGCGGTGGAGCTAATGTGGTGGCTCATGGTTACACAAAGG 575
| | ||||| || | ||||| ||||| || || ||||| || ||||| ||||
Sbjct 553 AATCCT-TACCAAACTC-TCGGCGGAGGAGCCAACACCGTCGCTCACGGCTACACTAAGG 610
Query 576 GTTCAGGTCTTGGT-GCAGAGATTGTTGGAACTTTTGTTCTGGTTTACACTGTTTTCTCA 634
| || ||| |||| || ||||| | ||||| || || || || ||||| || |||||
Sbjct 611 GCTCTGGT-TTGGGCGCTGAGATCATCGGAACCTTCGTCCTTGTCTACACGGTCTTCTCC 669
Query 635 GCTACTGATGCTAAGAGAAGTGC-CAGAGACTCTCATGTCCCTATCTTGGCTCCGCTTCC 693
|| ||||| || |||||||| || | | ||||| || || || || |||||||| || ||
Sbjct 670 GCCACTGACGCCAAGAGAAGCGCTC-GTGACTCCCACGTGCCGATTTTGGCTCCACTCCC 728
Query 694 AATTGGGTTTGCTGTCTTCTTGGTGCACTTGGCTACCATCCCAATTACTGGAACTGGCAT 753
||| || || ||||| |||||||| |||||||| || || || || || ||||| || ||
Sbjct 729 AATCGGATTCGCTGTGTTCTTGGTTCACTTGGCGACGATTCCGATAACCGGAACCGGAAT 788
Query 754 TAACCCGGCCAGGAGTCTCGGAGCTGCCATCATCTACAACAAGGATCATGCTTGGGATGA 813
||||| || |||||||| |||||||| ||||||||||||||||| || |||||||| ||
Sbjct 789 CAACCCAGCAAGGAGTCTTGGAGCTGCAATCATCTACAACAAGGACCACGCTTGGGACGA 848
Query 814 CCATTGGATCTTCTGGGTCGGTCCATTCATTGGTGCTGCGCTTGCTGCTCTGTACCATCA 873
||| ||||| |||||||| || ||||||||||| || || ||||| ||||| ||||| ||
Sbjct 849 CCACTGGATATTCTGGGTAGGACCATTCATTGGAGCAGCTCTTGCGGCTCTTTACCACCA 908
Query 874 GA-TAGTCATCAGAGCTATTCCTTTCAAGTCCA 905
| | ||||||||||| ||||| ||||||||||
Sbjct 909 -ACTTGTCATCAGAGCCATTCCATTCAAGTCCA 940
> Ahg943716 jgi|Araly1|943716|scaffold_604260.1
Length=987
Score = 617 bits (334), Expect = 4e-176
Identities = 692/867 (80%), Gaps = 16/867 (2%)
Strand=Plus/Plus
Query 50 ATGGAAGGCAAAGAAGAAGACG-TCAATGTTGGAGCCAACAAGTTCCCAGAGAGACAGCC 108
|||||||||||||||||||| | || | || ||||| ||||||||||| ||||| || ||
Sbjct 28 ATGGAAGGCAAAGAAGAAGATGTTCGA-GTGGGAGCTAACAAGTTCCCGGAGAGGCAACC 86
Query 109 GATCGGTACGGCGGCTCAG-ACGGAGAGCAAGGACTATAAGGAACCACCACCGGCGCCGT 167
|||||||| |||||||| | || ||||||||| || || ||||| || || ||
Sbjct 87 CATCGGTACATCGGCTCAGTCCACCGA-CAAGGACTACAAAGAGCCACCCCCTGCACCAC 145
Query 168 TTTTCGAACCCGGCGAGCTCAAATCTTGGTCTTTCTACAGAGCAGGGATAGCTGAGTTCA 227
| ||||| ||||||||||| | || ||||| ||||||||||| || || ||||||||||
Sbjct 146 TGTTCGAGCCCGGCGAGCTGAGCTCATGGTCCTTCTACAGAGCCGGAATTGCTGAGTTCA 205
Query 228 TAGCCACTTTCCT-TTTCCTCTACGTCACCGTTTTGACAGTCATGGGTGTTAAGAGAGCT 286
| || |||||||| ||| |||||| |||| || ||||| || ||||| || ||||||||
Sbjct 206 TTGCTACTTTCCTGTTT-CTCTACATCACTGTCTTGACTGTAATGGGAGTGAAGAGAGCA 264
Query 287 CCCAATATGTGTGCCTCTGTTGGAATCCAAGGCATCGCTTGGGCTTTTGGTGGCATGATC 346
|| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 265 CCAAACATGTGTGCTTCTGTTGGAATCCAAGGCATCGCTTGGGCTTTTGGTGGCATGATC 324
Query 347 TTTGCTCTTGTTTACTGTACTGCTGGAATCTCAGGAGGACATATTAATCCGGCGGTGACT 406
||||||||||| ||||||||||||||||| ||||| ||||| || || || ||||| ||
Sbjct 325 TTTGCTCTTGTCTACTGTACTGCTGGAATTTCAGGTGGACACATCAACCCTGCGGTTACA 384
Query 407 TTTGGTTTGTTCTTGGCGAGGAAGCTATCTTTAACCAGAGCTCTGTTCTACAT-AGTAAT 465
|| ||| |||||||||| ||||| | ||| | ||||||||| |||||||||| | || |
Sbjct 385 TTCGGTCTGTTCTTGGCTCGGAAGTTGTCTCTGACCAGAGCTGTGTTCTACATGATTA-T 443
Query 466 GCAGTGCCTTGGAGCTATATGTGGTGCTGGTGTGGTTAAAGGGTTTCAA-CCAGGGC-TG 523
||| || || ||||| || ||||||||||| || || || ||| ||| | ||| || |
Sbjct 444 GCAATGTCTCGGAGCCATCTGTGGTGCTGGAGTCGTCAA-GGGCTTCCAGCCAACGCCT- 501
Query 524 TACCAGACGAAT-GGCGGTGGAGCTAATGTGGTGGCTCATGGTTACACAAAGGGTTCAGG 582
|||||||| | || || || ||||| || ||||| || ||||| |||||||| ||
Sbjct 502 TACCAGACTC-TCGGTGGCGGTGCTAACACCGTCGCTCACGGCTACACCAAGGGTTCTGG 560
Query 583 TCTTGGTGCAGAGATTGTTGGAACTTTTGTTCTGGTTTACACTGTTTTCTCAGCTACTGA 642
|| ||||| || || | ||||| || ||||| || ||||| || ||||| || || ||
Sbjct 561 ACTCGGTGCTGAAATCATCGGAACCTTCGTTCTCGTCTACACCGTCTTCTCCGCCACCGA 620
Query 643 TGCTAAGAGAAGTGCCAGAGACTCTCATGTCCCTATCTTGGCTCCGCTTCCAATTGGGTT 702
|| |||||||| ||| | ||||| || || || || ||||| || || ||||| || ||
Sbjct 621 CGCCAAGAGAAGCGCCCGTGACTCACACGTTCCGATTTTGGCGCCACTCCCAATCGGATT 680
Query 703 TGCTGTCTTCTTGGTGCACTTGGCTACCATCCCAATTACTGGAACTGGCATTAACCCGGC 762
||| || |||||||| |||||||| || || || || || || || || || ||||| ||
Sbjct 681 TGCAGTGTTCTTGGTACACTTGGCAACAATTCCGATCACCGGGACCGGAATCAACCCAGC 740
Query 763 CAGGAGTCTCGGAGCTGCCATCATCTACAACAAGGATCA-TGCTTGGGATGACCATTGGA 821
|| ||||| ||||| || || |||||||||||||| || | ||||||| ||||||||||
Sbjct 741 TAGAAGTCTTGGAGCCGCAATTATCTACAACAAGGACCACT-CTTGGGACGACCATTGGA 799
Query 822 TCTTCTGGGTCGGTCCATTCATTGGTGCTGCGCTTGCTGCTCTGTACCATCAGATAGTCA 881
| |||||||| || ||||||||||| || || || || || || || || ||||| ||||
Sbjct 800 TTTTCTGGGTTGGACCATTCATTGGAGCAGCTCTAGCAGCACTCTATCACCAGATTGTCA 859
Query 882 TCAGAGCTATTCCTTTCAAGTCCAAGA 908
||||||| |||||||||||| |||||
Sbjct 860 TCAGAGCGATTCCTTTCAAGAGCAAGA 886
> Ahg934220 jgi|Araly1|934220|scaffold_402208.1
Length=462
Score = 555 bits (300), Expect = 3e-157
Identities = 323/334 (97%), Gaps = 2/334 (1%)
Strand=Plus/Plus
Query 484 ATGTGGTGCTGGTGTGGTTAAAGGGTTTCAACCAGGGCTGTACCAGACGAATGGCGGTGG 543
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 95 ATGTGGTGCTGGTGTGGTTAAAGGGTTTCAACCAGGGCTATACCAGGCGAATGGCGGTGG 154
Query 544 AGCTAATGTGGTGGCTCATGGTTACACAAAGGGTTCAGGTCTTGGTGCAGAGATTGTTGG 603
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 155 AGCTAATGTGGTGGCTCATGGTTATACAAAGGGTTCAGGTCTTGGTGCAGAGATTATTGG 214
Query 604 AACTTTTGTTCTGGTTTACACTGTTTTCTCAGCTACTGATGCTAAGAGAAGTGCCAGAGA 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 215 AACTTTTGTTCTGGTTTACACTGTTTTCTCAGCTACTGATGCTAAGAGAAGTGCCAGAGA 274
Query 664 CTCTCATGTCCCTATCTTGGCT-CCGCTTCCAATTGGGTTTGCTGTCTTCTTGGTGCACT 722
||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||
Sbjct 275 GTCTCATGTCCCTATCTTGG-TGCCGCTTCCAATTGGGTTTGCTGTCTTCTTGGTACACT 333
Query 723 TGGCTACCATCCCAATTACTGGAACTGGCATTAACCCGGCCAGGAGTCTCGGAGCTGCCA 782
|||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 334 TGGCTACCATCCCAATCACTGGAACCAGCATTAACCCGGCCAGGAGTCTCGGAGCTGCCA 393
Query 783 TCATCTACAACAAGGATCATGCTTGGGATGACCA 816
||||||||||||||||||||||||||||||||||
Sbjct 394 TCATCTACAACAAGGATCATGCTTGGGATGACCA 427
> Ahg928883 jgi|Araly1|928883|scaffold_301340.1
Length=451
Score = 555 bits (300), Expect = 3e-157
Identities = 323/334 (97%), Gaps = 2/334 (1%)
Strand=Plus/Plus
Query 484 ATGTGGTGCTGGTGTGGTTAAAGGGTTTCAACCAGGGCTGTACCAGACGAATGGCGGTGG 543
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 84 ATGTGGTGCTGGTGTGGTTAAAGGGTTTCAACCAGGGCTATACCAGGCGAATGGCGGTGG 143
Query 544 AGCTAATGTGGTGGCTCATGGTTACACAAAGGGTTCAGGTCTTGGTGCAGAGATTGTTGG 603
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 144 AGCTAATGTGGTGGCTCATGGTTATACAAAGGGTTCAGGTCTTGGTGCAGAGATTATTGG 203
Query 604 AACTTTTGTTCTGGTTTACACTGTTTTCTCAGCTACTGATGCTAAGAGAAGTGCCAGAGA 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 204 AACTTTTGTTCTGGTTTACACTGTTTTCTCAGCTACTGATGCTAAGAGAAGTGCCAGAGA 263
Query 664 CTCTCATGTCCCTATCTTGGCT-CCGCTTCCAATTGGGTTTGCTGTCTTCTTGGTGCACT 722
|||||||||||||||||||| | |||||||||||||||||||||||||||||||| ||||
Sbjct 264 CTCTCATGTCCCTATCTTGG-TGCCGCTTCCAATTGGGTTTGCTGTCTTCTTGGTACACT 322
Query 723 TGGCTACCATCCCAATTACTGGAACTGGCATTAACCCGGCCAGGAGTCTCGGAGCTGCCA 782
|||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||
Sbjct 323 TGGCTACCATCCCAATCACTGGAACCAGCAGTAACCCGGCCAGGAGTCTCGGAGCTGCCA 382
Query 783 TCATCTACAACAAGGATCATGCTTGGGATGACCA 816
||||||||||||||||||||||||||||||||||
Sbjct 383 TCATCTACAACAAGGATCATGCTTGGGATGACCA 416
> Ahg896811 jgi|Araly1|896811|Al_scaffold_0005_777
Length=468
Score = 555 bits (300), Expect = 3e-157
Identities = 323/334 (97%), Gaps = 2/334 (1%)
Strand=Plus/Plus
Query 484 ATGTGGTGCTGGTGTGGTTAAAGGGTTTCAACCAGGGCTGTACCAGACGAATGGCGGTGG 543
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 123 ATGTGGTGCTGGTGTGGTTAAAGGGTTTCAACCAGGGCTATACCAGGCGAATGGCGGTGG 182
Query 544 AGCTAATGTGGTGGCTCATGGTTACACAAAGGGTTCAGGTCTTGGTGCAGAGATTGTTGG 603
|||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||
Sbjct 183 AGCTAATGTGGTGGCTCATGGTTATACAAAGGGTTCAGGTCTTGGTGCAGAGATTATTGG 242
Query 604 AACTTTTGTTCTGGTTTACACTGTTTTCTCAGCTACTGATGCTAAGAGAAGTGCCAGAGA 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 243 AACTTTTGTTCTGGTTTACACTGTTTTCTCAGCTACTGATGCTAAGAGAAGTGCCAGAGA 302
Query 664 CTCTCATGTCCCTATCTTGGCT-CCGCTTCCAATTGGGTTTGCTGTCTTCTTGGTGCACT 722
||||||||||| |||||||| | |||||||||||||||||||||||||||||||| ||||
Sbjct 303 CTCTCATGTCCATATCTTGG-TGCCGCTTCCAATTGGGTTTGCTGTCTTCTTGGTACACT 361
Query 723 TGGCTACCATCCCAATTACTGGAACTGGCATTAACCCGGCCAGGAGTCTCGGAGCTGCCA 782
|||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct 362 TGGCTACCATCCCAATCACTGGAACCAGCATTAACCCGGCCAGGAGTCTCGGAGCTGCCA 421
Query 783 TCATCTACAACAAGGATCATGCTTGGGATGACCA 816
||||||||||||||||||||||||||||||||||
Sbjct 422 TCATCTACAACAAGGATCATGCTTGGGATGACCA 455
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 42087700368
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5