BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G24000.1
Length=2435
Score E
Sequences producing significant alignments: (Bits) Value
Ahg492463 jgi|Araly1|492463|fgenesh2_kg.7__1896__AT4G24000.1 3208 0.0
Ahg889762 jgi|Araly1|889762|Al_scaffold_0007_1748 2202 0.0
Ahg329260 jgi|Araly1|329260|fgenesh1_pm.C_scaffold_7001487 2113 0.0
Ahg945706 jgi|Araly1|945706|scaffold_701935.1 965 0.0
> Ahg492463 jgi|Araly1|492463|fgenesh2_kg.7__1896__AT4G24000.1
Length=2286
Score = 3208 bits (1737), Expect = 0.0
Identities = 2094/2265 (92%), Gaps = 29/2265 (1%)
Strand=Plus/Plus
Query 60 tatatatTTGTGGTCACTAATTTCTCCAAAAACCAGTTGCCTTCCGTAAAAAGATGGAAC 119
|||||||||||||||| || |||||| |||||||||||||||||| | ||||||||||||
Sbjct 2 TATATATTTGTGGTCATTATTTTCTCGAAAAACCAGTTGCCTTCCTTGAAAAGATGGAAC 61
Query 120 CTCAGAGAAAACACTCGACAGCCCTCCACACGTGTCATCCCTGCCGGCGAACCATTCCAT 179
||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 62 CTCGGAGAAAACACTCGACGGCCCTCCACACGTGTCATCCCTGCCGGCGCGCCATTCCAT 121
Query 180 ACAGAATCTACGCCGTATTTCACACGTGTGGCATCATAGCTCTCATGTATCACCATGTAC 239
||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||||
Sbjct 122 ACAGAATCTACGCCGTAATCCACACGTGTGGCATCATAGCCCTCATGTATCACCATGTAC 181
Query 240 ACTCAATTGTCAAC-GCAAACAACACTCTAATAACATGTCTTCTTCTCCTCTCCGATATT 298
|||| || || || |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 182 TCTCACTTCTC-ACAGCAAACAACACTCTTATAACATGTCTTCTTCTCCTCTCCGATATT 240
Query 299 GTTCTCGCCTTCATGTGGGCAACCACAACTTCCCTCCGGTTAAACCCGATTCATCGGACC 358
||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||
Sbjct 241 GTTCTCGCCTTCATGTGGGTAACCACAACTTCCCTCCGGTTAAACCCGGTTCACCGGACG 300
Query 359 GAGTACCCTGAAAAATATGCTGCTAAACCGGAGGACTTTCCAAAGCTGGACGTTTTTATA 418
||||||||||| |||||||| |||||||||||||| ||||| ||||||||||| ||||||
Sbjct 301 GAGTACCCTGAGAAATATGCAGCTAAACCGGAGGATTTTCCGAAGCTGGACGTGTTTATA 360
Query 419 TGCACGGCTGATCCGTACAAGGAGCCTCCGATGATGGTGGTTAACACCGCTTTATCGGTG 478
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 361 TGCACGGCTGATCCGTACAAGGAGCCTCCGATGATGGTGGTTAACACCGCCTTATCTGTG 420
Query 479 ATGGCTTACGAGTATCCGTCTC-ATAAGATCTCAGTGTACGTATCGGACGATGGAGGATC 537
||||| || || ||| |||| | ||||||||||||| || ||||||||||||||||||||
Sbjct 421 ATGGCCTATGAATATGCGTC-CGATAAGATCTCAGTCTATGTATCGGACGATGGAGGATC 479
Query 538 TTCCTTGACTTTGTTTGCTCTTATGGAGGCTGCCAAGTTCTCTAAGCATTGGTTGCCCTT 597
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 480 TTCATTGACTTTGTTTGCTCTTATGGAGGCTGCCAAGTTCTCTAAGCGTTGGTTGCCCTT 539
Query 598 TTGCAAGAATAACAATGTTCAAGATCGCTCTCCTGAAGTTTATTTTTCTTCAAAGTCACA 657
||||||||||||||||||||||||||| || |||||||||||||| || || |||||||
Sbjct 540 TTGCAAGAATAACAATGTTCAAGATCGGTCCCCTGAAGTTTATTTCTCATCTGAGTCACA 599
Query 658 TTCTTC-GAGTGATGAAGCTGAAAATCTTAAGATGATGTACGAAGACATGAAGAGTAGAG 716
|| || |||||| ||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct 600 GTC-TCAGAGTGAGGAAGCTGAAAACCTTAAGCTGATGTACGAAGACATGAAGAGTAGAG 658
Query 717 TCGAACATGTGGTCGAGAGCGGAAAAGTTGAGACTGCGTTTATCGCATGCGATCAATTT- 775
| ||| |||||| |||||| ||||||||||||||||| |||||| ||||||||||||||
Sbjct 659 TAGAAAATGTGGCCGAGAGTGGAAAAGTTGAGACTGCATTTATCACATGCGATCAATTTC 718
Query 776 AGTTGTGTGTTCGATCTGTGGACAGATAAATTCACTCGTCATGACCATCCTACCATTATT 835
| | | || |||||| |||||||||||||||||||||||||||||||||| || ||||||
Sbjct 719 A-TGGGGTATTCGATTTGTGGACAGATAAATTCACTCGTCATGACCATCCCACAATTATT 777
Query 836 -ATGGTGCTACAACATAACGAAAC--A-GAGATGATGCCAAACCTTATATATGTTTCAAG 891
| |||||||||||| |||||||| | ||||||||||||||||| || |||||||||||
Sbjct 778 CA-GGTGCTACAACACAACGAAACAGATGAGATGATGCCAAACCTAATCTATGTTTCAAG 836
Query 892 AGAAAAGAGTAAAGTTTCACCACATCATT-TCAAAGCCGGTGCTCTTAATACTTTGTTAC 950
||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 837 AGAGAAGAGTAAAGTTTCACCACATCATTAT-AAAGCCGGTGCTCTTAATACTTTGTTAC 895
Query 951 GTGTATCTGCCGTGATGACAAACTCACCAATCATTCTAACACTAGATTGTGACATGTACT 1010
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 896 GAGTATCTGCCGTGATGACAAACTCACCAATCATTCTAACACTAGATTGTGACATGTACT 955
Query 1011 CAAACAATCCTACAACACCACTTCATGCTCTGTGCTATTTGTCAGACCCTAAAATCAATT 1070
||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 956 CAAACAATCCTACAACACCACTTCATGCTCTATGCTATTTGTCAGATCCTAAAATCAATT 1015
Query 1071 TTGATTTAGGATTTGTGCAATTTCCTCAAAAATTTCAAGGAGTAAACAAAAATGATATTT 1130
||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1016 TTGGTTTAGGATTTGTGCAATTTCCTCAAAAATTTCAAGGAATAAACAAAAATGATATTT 1075
Query 1131 ATGCATCCGAGCTCAAACGCCCATTTGACATCAACACGGTTGGGTTTGATGGACTTATGG 1190
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 1076 ATGCATCGGAGCTCAAACGCCCATTTGACATCAACACGATTGGGTTTGATGGACTTACGG 1135
Query 1191 GACCAGTTCATATGGGAACTGGGTGTTTCTTCAATCGACGGGCGTTTTATGGGCCTCC-G 1249
| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1136 GCCCAGTTCATATGGGAACTGGGTGTTTCTTCAATCGACGGGCATTTTATGGGCCTCCCG 1195
Query 1250 ACTACTTTGATTTTGCCTGAGATAGAAACATTTGGGCCAAATCGGATTGCCGATAAGCCC 1309
||| ||||||||||||||||||||||| | |||| ||||||||||||| ||||| | ||
Sbjct 1196 -CTAGTTTGATTTTGCCTGAGATAGAAAAACTTGGACCAAATCGGATTGTCGATATGTCC 1254
Query 1310 ATTAA-AGCCCAAGATATTTTGGCGTTGGCACACGATGTAGCAGGATGTAACTACGAGTG 1368
||||| | || ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1255 ATTAAGAACC-AAGATATTTTGGCGTTGGCACACGATGTAGCAGGATGTAACTACGAGCG 1313
Query 1369 CAACACCAATTGGGGATCCAAGATAGGTTTCAGATATGGGTCATTAGTAGAAGACTACTT 1428
||||||||||||||||||||||||||| ||||| || || |||||||||||||||||||
Sbjct 1314 CAACACCAATTGGGGATCCAAGATAGGGTTCAGGTACGGCTCATTAGTAGAAGACTACTA 1373
Query 1429 CACAGGATTTATGCTCCATTGTGAAGGATGGAGATCAATTTTTTGCAGCCCGACAAAAG- 1487
||||||||||||||||||||||||||||||||||||| | ||||||||||| | |||||
Sbjct 1374 CACAGGATTTATGCTCCATTGTGAAGGATGGAGATCAGTATTTTGCAGCCCTA-AAAAGG 1432
Query 1488 CTGCATTTTATGGAGACTCCCCAAAATGCCTAACGGATGTAATAGGCCAACAAATCCGAT 1547
|||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||
Sbjct 1433 CTGCATTTTATGGAGAGTCCCCAAAATGCCTAACTGATATAATAGGCCAACAAATCCGAT 1492
Query 1548 GGTCCGTTGGACTTCTTGAAGTAGCTTTTTCAAGATACAATCCACTTACCTATGGAATCA 1607
||||||||||||||||||||||| |||||||||| ||||| ||| ||||||||||| | |
Sbjct 1493 GGTCCGTTGGACTTCTTGAAGTAACTTTTTCAAGGTACAACCCAATTACCTATGGATTGA 1552
Query 1608 AGCCATTGAGCCTATTAATGAGCTTAGGTTATTGCCACTATGCATTTTGGCCATTTTGGT 1667
|| || |||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 1553 AGTCACTGAGCCTATTAATGAGCTTAGGCTATTGCCACTATGCATTTTGGCCGTTTTGGT 1612
Query 1668 GTATTCCTCTCGTTGTCTATGGAATTTTACCCCAAGTTGCCCTCATACATGGAGTTAGCG 1727
||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1613 CAATTCCTCTCGTCGTCTATGGACTTTTACCCCAAGTTGCCCTCATACATGGATTTAGCG 1672
Query 1728 TCTTTCCCAAGGCATCGGATCCATGGTTTTGGCTTTACATTATCTTGTTTCTCGGTGGGT 1787
|||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |
Sbjct 1673 TCTTCCCCAAGGCATCGGATCCGTGGTTTTGGCTTTACATCATCTTGTTTCTCGGTGGAT 1732
Query 1788 ACGCGCAAGATCTATCAGACTTTTTATTAGAAGGAGGAACTTATCGGAAATGGTGGAACG 1847
|||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1733 ACGCGCAAGATCTATCGGACTTTTTATTAGAAGGAGGAACTTATAGGAAATGGTGGAACG 1792
Query 1848 ATCAAAGAATGTGGATGGTGAGAGGACTCTCTTCTTTCTTCTTTGGTTTTACAGAGTTCA 1907
||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 1793 ATCAAAGGATGTGGATGGTAAGAGGACTTTCTTCTTTCTTCTTTGGTTTTACAGAGTTCA 1852
Query 1908 CTCTCAAAACCCTAAACCTCTCCACTCAAGGATAT-AATGTCACGAGTAAATCCAACGAC 1966
|||||||||||||||||||||| |||||||||| | || ||||| |||||| ||||||||
Sbjct 1853 CTCTCAAAACCCTAAACCTCTCGACTCAAGGAT-TCAACGTCACCAGTAAAGCCAACGAC 1911
Query 1967 GATAATGAACAAATGAAGCGGTATGAGCAAGAGATCTTCGATTTTGGGCCCTCTTCGTCC 2026
||||||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||
Sbjct 1912 GATAATGAACAAATGAAGCGGTACGAGCAAGAGATCTTTGATTTCGGGCCCTCTTCGTCC 1971
Query 2027 ATGTTCTTGCCCATTACTACGGTCGCCATCA-TGAATCTGCTAGCTTTT--ATGCGTGGC 2083
|||||||||||||| |||||||||||||| | ||||||| || |||||| ||| | ||
Sbjct 1972 ATGTTCTTGCCCATGACTACGGTCGCCAT-AGTGAATCTACTTGCTTTTGTATG-G-GGA 2028
Query 2084 CTATATGGTATTTTCACTTGGGGAGAAGGACCCGTCCTTGAACTGATGCTAGCGAGTTTC 2143
| |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2029 ATTTATGTTATTTTCACTTGGGGAGAAGGACCCGTCCTTGAACTGATGCTGGCGAGTTTC 2088
Query 2144 GCGGTGGTGAATTGCTTACCGATCTATGAAGCCATGGTGTTGAGGATCGATGACGGAAAA 2203
| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2089 GTGGTGGTAAATTGCTTACCGATCTATGAAGCCATGGTGTTGAGGATCGATGACGGAAAA 2148
Query 2204 TTACCAAAAAGGATTTGTTTCTTAGCTGGGCTCCTCAGTTTTGTTCTTACCGGGTCAGGC 2263
||| || ||||||||||||||||||||||||||||| |||||||||||| |||||| ||
Sbjct 2149 TTAACATCAAGGATTTGTTTCTTAGCTGGGCTCCTCACTTTTGTTCTTACAGGGTCATGC 2208
Query 2264 TACTTCTTCCTCAAGTAACTTCACCATTAGGCCATTGTaaaaaaa 2308
|||||| |||||||||||||||||||||||| |||| | ||||||
Sbjct 2209 TACTTCCTCCTCAAGTAACTTCACCATTAGGTCATTATCAAAAAA 2253
> Ahg889762 jgi|Araly1|889762|Al_scaffold_0007_1748
Length=2199
Score = 2202 bits (1192), Expect = 0.0
Identities = 1874/2195 (85%), Gaps = 79/2195 (4%)
Strand=Plus/Plus
Query 137 ACAGCCCTCCACACGTGTCATCCCTGCCGGCGAACCATTCCATACAGAATCTACGCCGTA 196
||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 34 ACAACCCTCCACACGTGTCATCCCTGCCGGCGCGCCATTCCATACAGAATCTACGCCGTA 93
Query 197 TTTCACACGTGTGGCATCATAGCTCTCATGTATCACCATGTACACTCAATTGTCAAC-GC 255
| ||||||||||||||||||||||||||||||||||||||||||||| || || || ||
Sbjct 94 ATCCACACGTGTGGCATCATAGCTCTCATGTATCACCATGTACACTCACTTCTC-ACAGC 152
Query 256 AAACAACACTCTAATAACATGTCTTCTTCTCCTCTCCGATATTGTTCTCGCCTTCATGTG 315
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 153 AAACAACACTCTAATAACATGTCTTCTCCTCCTCTCCGATATTGTTCTCGCCTTCATGTG 212
Query 316 GGCAACCACAACTTCCCTCCGGTTAAACCCGATTCATCGGACCGAGTACCCTGAAAAATA 375
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 213 GGCAACCACAACTTCCCTCCGGTTAAACCCGGTTCATCGGACCGAGTACCCTGAGAAATA 272
Query 376 TGCTGCTAAACCGGAGGACTTTCCAAAGCTGGACGTTTTTATATGCACGGCTGATCCGTA 435
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 273 TGCAGCTAAACCGGAGGACTTTCCAAAGCTGGACGTGTTTATATGCACGGCTGATCCGTA 332
Query 436 CAAGGAGCCTCCGATGATGGTGGTTAACACCGCTTTATCGGTGATGGCTTACGAGTATCC 495
|||||||||||||||||||||||| |||||||| ||||| || |||||||| ||||||||
Sbjct 333 CAAGGAGCCTCCGATGATGGTGGTCAACACCGCCTTATCAGTCATGGCTTATGAGTATCC 392
Query 496 GTCTC-ATAAGATCTCAGTGTACGTATCGGACGATGGAGGATCTTCCTTGACTTTGTTTG 554
||| | ||||||| ||||| || ||||||||||||||||||||||| |||||||||||||
Sbjct 393 GTC-CGATAAGATTTCAGTCTATGTATCGGACGATGGAGGATCTTCGTTGACTTTGTTTG 451
Query 555 CTCTTATGGAGGCTGCCAAGTTCTCTAAGCATTGGTTGCCCTTTTGCAAGAATAACAATG 614
||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 452 CTCTTGTGGAGGCTGCTAAGTTCTCTAAGCATTGGTTGCCCTTTTGCAAGAAGAACAATA 511
Query 615 TTCAAGATCGCTCTCCTGAAGTTTATTTTTCTTCAAAGTCACATTCTTC-GAGTGATGAA 673
|| ||||||| || |||||||||||||| || |||||||||||||| || ||||||||||
Sbjct 512 TTGAAGATCGGTCCCCTGAAGTTTATTTCTCATCAAAGTCACATTC-TCAGAGTGATGAA 570
Query 674 GCTGAAAATCTTAAGATGATGTACGAAGACATGAAGAGTAGAGTCGAACATGTGGTCGAG 733
|||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||
Sbjct 571 GCTGAAAATCTTAAGATGATGTACAAAGACATGAAGAGTAGAGTAGAACATGTGGTGGAG 630
Query 734 AGCGGAAAAGTTGAGACTGCGTTTATCGCATGCGATCAATTTAGTTGTGTGTTCGATCTG 793
|| ||||||||||| ||| |||||||| |||||||||||||| || | || |||||| ||
Sbjct 631 AGTGGAAAAGTTGAAACTTCGTTTATCACATGCGATCAATTTCGTGGGGTATTCGATTTG 690
Query 794 TGGACAGATAAATTCACTCGTCATGACCATCCTACCATTATT-ATGGTGCTACAACAT-- 850
|||||||| ||||||||||||||||||||||| || |||||| | |||||||||| ||
Sbjct 691 TGGACAGACAAATTCACTCGTCATGACCATCCCACAATTATTCA-GGTGCTACAAAATAG 749
Query 851 --A-AC-------GA-A--A-C----AG-AGATGATGCCAAACCTTATATATGTTTCAAG 891
| || || | | | || | || ||||||||||| ||||||||||||||
Sbjct 750 CGAGACAGATATGGACACTACCAAAAAGTATATAATGCCAAACCTAATATATGTTTCAAG 809
Query 892 AGAAAAGAGTAAAGTTTCACCACATCATTTCAAAGCCGGTGCTCTTAATACTTTGTTACG 951
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 810 AGAGAAGAGTAAAGTTTCACCACATCATTTCAAAGCCGGTGCTCTTAATACTTTGCTACG 869
Query 952 TGTATCTGCCGTGATGACAAACTCACCAATCATTCTAACACTAGATTGTGACATGTACTC 1011
||||| | ||||||||||| ||||| ||||||||||||||||| ||||| ||||| ||
Sbjct 870 AGTATCAGGGGTGATGACAAATTCACCGATCATTCTAACACTAGACTGTGATATGTATTC 929
Query 1012 AAACAATCCTACAACACCACTTCATGCTCTGTGCTATTTGTCAGACCCTAAAATCAATTT 1071
||| | ||||||||||| ||| |||| | |||||||| |||| ||| ||||||| |
Sbjct 930 GAACGACCCTACAACACCGGTTCGTGCTTTATGCTATTTAACAGATCCTGAAATCAAATC 989
Query 1072 TGATTTAGGATT-TGTGCAATTTCCTCAAAAATTTCAAGGAGTAAACAAAAATGATATTT 1130
| |||||| || ||| || |||||||| ||||||| || | || |||||||||||| |
Sbjct 990 CGGTTTAGG-TTATGTACAGTTTCCTCAGAAATTTCTAGAAATAGGCAAAAATGATATAT 1048
Query 1131 ATGCATCCGAGCTCAAACGCC-CATTTGACATCAACACGGTTGGGTTTGATGGACTTATG 1189
|||||| || |||||||| | || | ||||| | ||||||||||||||| || |||
Sbjct 1049 ATGCATGTGAAAACAAACGCCTC-TTCAATATCAATATGGTTGGGTTTGATGGTCTAATG 1107
Query 1190 GGACC-AGTTCATATGGGAACTGGGTGTTTCTTCAATCGACGGGCGTTTTATGGGCCTCC 1248
|| || | | ||| |||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 1108 GGTCCGACT-CATGTGGGAACTGGTTGTTTCTTCAATCGACGGGCTTTTTATGGGCCTCC 1166
Query 1249 GA-CTACTTTGATTTTGCCTGAGATAGAA-ACATTTG-GGCCAAATCGGATTGCCGATAA 1305
| ||| |||||||| || ||||| || | ||| | ||||| |||||||||| |||||
Sbjct 1167 -ATCTAAGTTGATTTTACCGGAGATTGATGA-ATT-GAGGCCATATCGGATTGCGGATAA 1223
Query 1306 GCCCATTAAAGCCCAAGATATTTTGGCGTTGGCACACGATGTAGCAGGATGTAACTACGA 1365
| | || |||||||||||| ||||||| || ||||| ||||||||||||||| ||| ||
Sbjct 1224 GTCTATCAAAGCCCAAGATGTTTTGGCATTAACACACAATGTAGCAGGATGTATCTATGA 1283
Query 1366 GTGCAACACCAATTGGGGATCCAAGATAGGTTTCAGATATGGGTCATTAGTAGAAGACTA 1425
|| ||| |||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1284 GTACAATACCAATTGGGGATCCAAGATTGGATTCAGATATGGGTCATTAGTAGAAGACTA 1343
Query 1426 CTTCACAGGATTTATGCTCCATTGTGAAGGATGGAGATCAATTTTTTGCAGCCCGACA-A 1484
|| |||||| |||||| ||||||||||||||||||||||||| ||||||| ||| | | |
Sbjct 1344 CTACACAGGGTTTATGTTCCATTGTGAAGGATGGAGATCAATATTTTGCAACCCTA-AGA 1402
Query 1485 AAGCTGCATTTTATGGAGACTCCCCAAAATGCCTAACGGATGTAATAGGCCAACAAATCC 1544
||||||| ||||||||||| ||| |||| ||| || |||||| | || |||||||| |
Sbjct 1403 AAGCTGCTTTTTATGGAGATTCCTCAAAGTGCTTAGTTGATGTAGTGGGTCAACAAATGC 1462
Query 1545 GATGGTCCGTTGGACTTCTTGAAGTAGCT-TTTTCAA-GATACAATCC-ACTTACCTATG 1601
||||| ||||||| ||||||||| || | ||||||| || | || || | || |||||
Sbjct 1463 GATGGGCCGTTGGGCTTCTTGAAATAT-TGTTTTCAAAGA-A-AAGCCCAATTGTCTATG 1519
Query 1602 GAATCAAGCCATT-GAGCCTATTAATGAGCTTAGGTTATTGCCACTATGCATTTTGGCCA 1660
|| |||| |||| | || | |||||| ||||| | |||||| ||| | | ||| |||||
Sbjct 1520 GATTCAAATCATTAGGGC-TGTTAATGGGCTTATGCTATTGCAACTCTCCGTTTCGGCCA 1578
Query 1661 TTTTGGTGTATTCCTCTCGTTGTCTATGGAATTTTACCCCAAG-TTGCCCTCATAC-ATG 1718
||||||| ||||| | ||||||||| ||||||| || | |||| ||||| | |||
Sbjct 1579 TTTTGGTCAATTCCGGTTACCGTCTATGGACTTTTACCTCA-GCTTGCACTCAT-CTATG 1636
Query 1719 GAGTTAGCGTCTTTCCCAAGGCATCGGATCCATGGTTTTGGCTTTACAT-TATCTTGTT- 1776
||||||| ||||| ||||||||||| ||||| ||||||||||||||||| | | || ||
Sbjct 1637 GAGTTAGTGTCTTCCCCAAGGCATCTGATCCGTGGTTTTGGCTTTACATCTTT-TTATTC 1695
Query 1777 TCTCGGTGGGTACGCGCAAGATCTATCAGACTTTTTATTAGAAGGAGGAACTTATCGGAA 1836
| | |||| || || ||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1696 TTT-GGTGCTTATGCCCAAGATCTATCGGACTTTTTATTGGAAGGAGGAACTTATCGGAA 1754
Query 1837 ATGGTGGAACGATCAAAGAATG-TGGATGGTGAGAGGACTCTCTTCTTTCTTCTTTGGTT 1895
|||||||||||||||||||||| || ||| | | |||||||||||| ||| |||||||||
Sbjct 1755 ATGGTGGAACGATCAAAGAATGGTG-ATGATAAAAGGACTCTCTTCATTCGTCTTTGGTT 1813
Query 1896 TTACAGAGTTCACTCTCAAAACCCTAAACCTCTC--CAC-TCAAGGATATAATGTCACGA 1952
||| |||||||||||||||||||||||||||||| ||| | ||| | || |||| |
Sbjct 1814 TTATAGAGTTCACTCTCAAAACCCTAAACCTCTCTACACCT-AAGT-TC-AACATCACCA 1870
Query 1953 GTAAATCCAACGACGATAATGAACAAATGAAGCGGTATGAGCAAGAGATCTTCGATTTTG 2012
||||| |||| |||||||| ||||||| ||||||||| |||||||| || || |||||||
Sbjct 1871 GTAAAGCCAATGACGATAACGAACAAAGGAAGCGGTACGAGCAAGACATATTTGATTTTG 1930
Query 2013 GGCCCTCTTCGTCCATGTTCTTGCCCATT-ACTACGGTCGCCATCATGAATCTGCTAGCT 2071
| |||||||||||||||||||||| || |||||||| |||||| |||||||||| |||
Sbjct 1931 GAACCTCTTCGTCCATGTTCTTGCCT-TTGACTACGGTTGCCATCGTGAATCTGCTTGCT 1989
Query 2072 TTTATGC-GTGGCCTATATGGTATTTTCA-CTTGGGGAGAAGGACCCGTCCTTGAACTGA 2129
||| | | |||| || ||||||| | || || | |||| || || ||||||||| ||||
Sbjct 1990 TTTGT-CTGTGGGCTTTATGGTAATCTCTTCT-GCGGAGGAGAACTCGTCCTTGAGCTGA 2047
Query 2130 TGCTAGCGAG-TTTCGCGGTGGTGAATTGCTTACCGATCTATGAAGCCATGGTGTTGAGG 2188
|||| | ||| ||| ||||||||||||||||| |||||||| || || ||||||||||||
Sbjct 2048 TGCTGGTGAGCTTT-GCGGTGGTGAATTGCTTGCCGATCTACGAGGCTATGGTGTTGAGG 2106
Query 2189 ATCGATGACGGAAAATTACCAAAAAGGATTTGTTTCTTAGCTGGGCTCCTCA-GTTTTGT 2247
| ||||| ||||||||||||||||| ||| |||||||||||||| ||||| | || ||
Sbjct 2107 AAAGATGATGGAAAATTACCAAAAAGAATTAGTTTCTTAGCTGGGAACCTCACGGTT-GT 2165
Query 2248 TCTTACCGGGTC-AGGCTACTTCTTCCTCAAGTAA 2281
||||| | ||| || |||||| |||||||||||
Sbjct 2166 TCTTATTGTGTCCAGT-TACTTCGTCCTCAAGTAA 2199
> Ahg329260 jgi|Araly1|329260|fgenesh1_pm.C_scaffold_7001487
Length=2199
Score = 2113 bits (1144), Expect = 0.0
Identities = 1860/2197 (85%), Gaps = 83/2197 (4%)
Strand=Plus/Plus
Query 137 ACAGCCCTCCACACGTGTCATCCCTGCCGGCGAACCATTCCATACAGAATCTACGCCGTA 196
||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 34 ACAACCCTCCACAGGTGTCATCCCTGCCGGCGCGCCATTCCATACAGAATCTACGCCGTA 93
Query 197 TTTCACACGTGTGGCATCATAGCTCTCATGTATCACCATGTACACTCAATTGTCAAC-GC 255
| ||||||||||||||||||||||||||||||||||||||||||||| || || || ||
Sbjct 94 ATCCACACGTGTGGCATCATAGCTCTCATGTATCACCATGTACACTCACTTCTC-ACAGC 152
Query 256 AAACAACACTCTAATAACATGTCTTCTTCTCCTCTCCGATATTGTTCTCGCCTTCATGTG 315
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 153 AAACAACACTCTAATAACATGTCTTCTCCTCCTCTCCGATATTGTTCTCGCCTTCATGTG 212
Query 316 GGCAACCACAACTTCCCTCCGGTTAAACCCGATTCATCGGACCGAGTACCCTGAAAAATA 375
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 213 GGCAACCACAACTTCCCTCCGGTTAAACCCGGTTCATCGGACCGAGTACCCTGAGAAATA 272
Query 376 TGCTGCTAAACCGGAGGACTTTCCAAAGCTGGACGTTTTTATATGCACGGCTGATCCGTA 435
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 273 TGCAGCTAAACCGGAGGACTTTCCAAAGCTGGACGTGTTTATATGCACGGCTGATCCGTA 332
Query 436 CAAGGAGCCTCCGATGATGGTGGTTAACACCGCTTTATCGGTGATGGCTTACGAGTATCC 495
|||||||||||||||||||||||| |||||||| ||||| || |||||||||||||||||
Sbjct 333 CAAGGAGCCTCCGATGATGGTGGTCAACACCGCCTTATCAGTCATGGCTTACGAGTATCC 392
Query 496 GTCTC-ATAAGATCTCAGTGTACGTATCGGACGATGGAGGATCTTCCTTGACTTTGTTTG 554
||| | ||||||| ||||| || ||||||||||||||||||||||| |||||||||||||
Sbjct 393 GTC-CGATAAGATTTCAGTCTATGTATCGGACGATGGAGGATCTTCGTTGACTTTGTTTG 451
Query 555 CTCTTATGGAGGCTGCCAAGTTCTCTAAGCATTGGTTGCCCTTTTGCAAGAATAACAATG 614
||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 452 CTCTTGTGGAGGCTGCTAAGTTCTCTAAGCATTGGTTGCCCTTTTGCAAGAAGAACAATA 511
Query 615 TTCAAGATCGCTCTCCTGAAGTTTATTTTTCTTCAAAGTCACATTCTTC-GAGTGATGAA 673
|| ||||||| || |||||||||||||| || |||||||||||||| || ||||||||||
Sbjct 512 TTGAAGATCGGTCCCCTGAAGTTTATTTCTCATCAAAGTCACATTC-TCAGAGTGATGAA 570
Query 674 GCTGAAAATCTTAAGATGATGTACGAAGACATGAAGAGTAGAGTCGAACATGTGGTCGAG 733
|||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |||
Sbjct 571 GCTGAAAATCTTAAGATGATGTACAAAGACATGAAGAGTAGAGTAGAACATGTGGTGGAG 630
Query 734 AGCGGAAAAGTTGAGACTGCGTTTATCGCATGCGATCAATTTAGTTGTGTGTTCGATCTG 793
|| ||||||||||| ||| |||||||| |||||||||||||| || | || |||||| ||
Sbjct 631 AGTGGAAAAGTTGAAACTTCGTTTATCACATGCGATCAATTTCGTGGGGTATTCGATTTG 690
Query 794 TGGACAGATAAATTCACTCGTCATGACCATCCTACCATTATT-ATGGTGCTACAACAT-- 850
|||||||| ||||||||||||||||||||||| || |||||| | |||||||||| ||
Sbjct 691 TGGACAGACAAATTCACTCGTCATGACCATCCCACAATTATTCA-GGTGCTACAAAATAG 749
Query 851 --A-AC-------GA-A--A-C----AG-AGATGATGCCAAACCTTATATATGTTTCAAG 891
| || || | | | || | || ||||||||||| ||||||||||||||
Sbjct 750 CGAGACAGATATGGACACTACCAAAAAGTATATAATGCCAAACCTAATATATGTTTCAAG 809
Query 892 AGAAAAGAGTAAAGTTTCACCACATCATTTCAAAGCCGGTGCTCTTAATACTTTGTTACG 951
||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 810 AGAGAAGAGTAAAGTTTCACCACATCATTTCAAAGCCGGTGCTCTTAATACTTTGCTACG 869
Query 952 TGTATCTGCCGTGATGACAAACT-CACCAATCATTCTAACACTAGATTGTGACATGTACT 1010
|| |||| || ||||| || | |||| || ||| |||||||||| ||||| ||||| |
Sbjct 870 AGTGTCTGGAGTCATGACGAA-TGCACCGATTATTTTAACACTAGACTGTGATATGTATT 928
Query 1011 CAAACAATCCTACAACACCACTTCATGCTCT-GTGCTATTTGTCAGACCCTAAAATCAAT 1069
| ||| ||||| |||||||| ||| ||| || ||||||||| |||| ||| |||||||
Sbjct 929 CGAACGATCCTGCAACACCAGTTCGTGC-CTTGTGCTATTTAACAGATCCTGAAATCAAA 987
Query 1070 TTTGATTTAGGATT-TGTGCAATTTCCTCAAAAATTTCAAGGAGTAAACAAAAATGATAT 1128
|| |||||| || ||| || ||||||||||||||||||||| ||| ||| ||||||||
Sbjct 988 ACTGGTTTAGG-TTATGTACAGTTTCCTCAAAAATTTCAAGGAATAAGCAAGAATGATAT 1046
Query 1129 TTATGCATCCG-AGCTCAAACGCC-CATTTGACATCAACACGGTTGGGTTTGATGGACTT 1186
||||||| || | | || || | | ||||| |||| | | | ||||||||||| ||
Sbjct 1047 CTATGCATGCGCATAT-AAGCGTCTC-TTTGAGATCAGTATGATAGGGTTTGATGGTCTA 1104
Query 1187 ATGGGACCAGTTCATATGGGAACTGGGTGTTTCTTCAATCGACGGGCGTTTTATGGGCCT 1246
||||| ||| |||| | |||||||| ||||||||||||||||| | ||||||||| ||
Sbjct 1105 ATGGGCCCAAATCATGTAGGAACTGGTTGTTTCTTCAATCGACGAGTTTTTTATGGGGCT 1164
Query 1247 CCGACTACTTTGATTTTGCCTGAGATAGA--AACATTTGGGCCAAATCGGATTGCCGATA 1304
||| ||| ||||||||||||||||||||| ||| || | |||| ||| | || ||||
Sbjct 1165 CCGTCTAATTTGATTTTGCCTGAGATAGATGAAC-TTAAGCCCAA-TCGTACTGTAGATA 1222
Query 1305 AGCCCATTAAAGCCCAAGATATTTTGGCGTTGGCACACGATGTAGCAGGATGTAACTACG 1364
||||||| || || |||||| |||| || ||||||||| | |||||||| |||| |||||
Sbjct 1223 AGCCCATCAACGCTCAAGATGTTTTAGCATTGGCACACAAAGTAGCAGGCTGTATCTACG 1282
Query 1365 AGTGCAACACCAATTGGGGATCCAAGATAGGTT-TCAGATATGGGTCATTAGTAGAAGAC 1423
|| |||||||||||||||||| ||||| || | ||||| || || ||||||||||||
Sbjct 1283 AGCACAACACCAATTGGGGATCAAAGATTGGACAT-AGATACGGATCTTTAGTAGAAGAC 1341
Query 1424 TACTTCACAGGATTTATGCTCCATTGTGAAGGATGGAGATCAATTTTTTGCAG-CCCGAC 1482
|||| |||||| | || ||||||||||||||||||||||||| |||||||||| ||| |
Sbjct 1342 TACTACACAGGGTATAGGCTCCATTGTGAAGGATGGAGATCAGTTTTTTGCAGTCCC-A- 1399
Query 1483 AAA-AGCTGCATTTTATGGAGACT-CCCCAAAATGCCTAACGGATGTAAT-AGGCCAACA 1539
||| ||| ||||||| ||||| | |||||||| |||||| |||||| | || ||||||
Sbjct 1400 AAAGAGCAGCATTTTGCGGAGA-TGCCCCAAAAAGCCTAATTGATGTAGTCAG-CCAACA 1457
Query 1540 AATCCGATGGTCCGTTGGACTTCTTGAAGTAGCTTTTTCAAGATACAATCC-ACTTACCT 1598
|| ||||| || |||| ||||||||||| || || ||||| || | || | ||||||
Sbjct 1458 AAAAAGATGGGCCATTGGGCTTCTTGAAGTTGCCTTCTCAAGGTATAGCCCCA-TTACCT 1516
Query 1599 ATGGAATCAAGCCATTGAGCCTATTAATGAGCTTAGGTTATTGCCACTATGCATTTTGGC 1658
|||| |||| || || | ||||||||| | ||||| ||||| || || |||| |||||
Sbjct 1517 ATGGTGTCAAATCAATGGGTCTATTAATGGGATTAGGCTATTGTCAATACGCATGTTGGC 1576
Query 1659 CATTTTGGTGTA-TTCCTC-TCGTTGTCTATGGAATT-TTACCCCAAGTTGCCCTCATAC 1715
||||||||| | |||||| | || ||||||||| || || |||||| |||| ||| | |
Sbjct 1577 CATTTTGGTC-ACTTCCTCAT-GTCGTCTATGGA-TTCTTGCCCCAACTTGCTCTCCT-C 1632
Query 1716 -ATGGAGTTAGCGTCTTTCCCAAGGCATCGGATCCATGGTTTTGGCTTTACATTATCTTG 1774
||||||||||||||||||||||| |||| ||||||||||||||||||||||| | |||
Sbjct 1633 TATGGAGTTAGCGTCTTTCCCAAGTCATCAGATCCATGGTTTTGGCTTTACATCGTTTTG 1692
Query 1775 TTTCTCGGTGGGTACGCGCAAGATCTA-TCAGACTTTTTATTAGAAGGAGGAACTTATCG 1833
|| ||||||| || |||||||||||| || |||||| ||||||||||||||||||||||
Sbjct 1693 TTCCTCGGTGCATATGCGCAAGATCTACTC-GACTTTGTATTAGAAGGAGGAACTTATCG 1751
Query 1834 -GAAATGGTGGAACGATCAAAGAATGTGGATGG-TGAGAGGACTCTCTTCTTTCTTCTTT 1891
| | |||||||||||||||||||||||| | | | |||||| ||||||| | | |||
Sbjct 1752 CGGA-TGGTGGAACGATCAAAGAATGTGG-TCGATAAGAGGATTCTCTTCACACCTATTT 1809
Query 1892 GGTTTTACAGAGTTCACTCT-CAAAACCCTAAACCTCTCCACTCAAGGATAT-AATGTCA 1949
|| || | |||||||||||| |||| |||||||||||||||| || |||| | || ||||
Sbjct 1810 GGCTTCATAGAGTTCACTCTTCAAA-CCCTAAACCTCTCCACACATGGAT-TCAACGTCA 1867
Query 1950 CGAGTAAATCCAACGACGAT-AATGAACAAATG-AAGCGGTATGAGCAAGAGATCTTCGA 2007
| || ||| ||||||| ||| || ||||| | | ||| |||||||| ||||||| || ||
Sbjct 1868 CAAGCAAAGCCAACGATGATGAA-GAACAGA-GCAAGAGGTATGAGAAAGAGATGTTTGA 1925
Query 2008 TTTTGGGCCCTCTTCGTCCATGTTCTTGCCCATTACTACGGTCGCC-ATCA-TGAATCTG 2065
|| || ||||||||| | ||||||||||| || || ||| || | || | |||| ||
Sbjct 1926 GTTCGGTCCCTCTTCGACAATGTTCTTGCCTATGACCACGA-CGGCGAT-AGTGAACCTC 1983
Query 2066 CTAGCTTTTATGC-GTGGCCTATATGGTATTTTCACTTGGGGAGAAGGACCCGTCCTTGA 2124
|| |||||| | | | || || |||||| ||||| ||||||||||||||| |||||||||
Sbjct 1984 CTTGCTTTTGT-CTGGGGGCTTTATGGTCTTTTCGCTTGGGGAGAAGGACTCGTCCTTGA 2042
Query 2125 ACTGATGCTAGCGAGTTTCGCGGTGGTGAATTGCTTACCGATCTATGAAGCCATGGTGTT 2184
|||||||||||||| |||||||||||||||||||| || |||||||| || ||||||||
Sbjct 2043 GCTGATGCTAGCGAGCTTCGCGGTGGTGAATTGCTTGCCAATCTATGAGGCTATGGTGTT 2102
Query 2185 GAGGATCGATGACGGAAAATTACCAAAAAGGATTTGTTTCTTAGCTGGGCTCCTCAGTTT 2244
||||| ||| | ||||||||||||||||| ||||||||| |||||| | |||||| ||
Sbjct 2103 GAGGAAAGATAATGGAAAATTACCAAAAAGAATTTGTTTCGTAGCTGTGATCCTCACATT 2162
Query 2245 TGTTCTTACCGGGTCAGGCTACTTCTTCCTCAAGTAA 2281
||| || | | |||||| ||||||||||||||||||
Sbjct 2163 TGTGCTGATTGTGTCAGGTTACTTCTTCCTCAAGTAA 2199
> Ahg945706 jgi|Araly1|945706|scaffold_701935.1
Length=1026
Score = 965 bits (522), Expect = 0.0
Identities = 759/867 (88%), Gaps = 42/867 (5%)
Strand=Plus/Plus
Query 142 CCTCCACACGTGTCATCCCTGCCGGCGAACCATTCCATACAGAATCTACGCCGTATTTCA 201
||||||||||||| |||| ||| |||| ||||||||||||||||||||||||||||||||
Sbjct 59 CCTCCACACGTGTTATCCGTGCGGGCGCACCATTCCATACAGAATCTACGCCGTATTTCA 118
Query 202 CACGTGTGGCATCATAGCTCTCATGTATCACCATGTACACTCAATTGTCA-ACGCAAACA 260
||||||||||||||||||||||||||||||||||||||||||| || ||| | |||||||
Sbjct 119 CACGTGTGGCATCATAGCTCTCATGTATCACCATGTACACTCACTTCTCACA-GCAAACA 177
Query 261 ACACTCTAATAACATGTCTTCTTCTCCTCTCCGATATTGTTCTCGCCTTCATGTGGGCAA 320
||||||| ||||||||||||||||||||||||||||| |||||| ||||||| |||| ||
Sbjct 178 ACACTCTTATAACATGTCTTCTTCTCCTCTCCGATATGGTTCTCACCTTCATATGGGTAA 237
Query 321 CCACAACTTCCCTCCGGTTAAACCCGATTCATCGGACCGAGTACCCTGAAAAATATGCTG 380
|||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |
Sbjct 238 CCACAACTTCCCTCCGGTTAAACCCGGTTCATCGGACCGAGTACCCTGAGAAATATGCAG 297
Query 381 CTAAACCGGAGGACTTTCCAAAGCTGGACGTTTTTATATGCACGGCTGATCCGTACAAGG 440
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 298 CTAAACCGGAGGACTTTCCGAAGCTGGACGTGTTTATATGCACGGCTGATCCGTACAAGG 357
Query 441 AGCCTCCGATGATGGTGGTTAACACCGCTTTATCGGTGATGGCTTACGAGTATCCGTCTC 500
|||||||||||||||||||||||||||||||||| |||||||| || || |||||||| |
Sbjct 358 AGCCTCCGATGATGGTGGTTAACACCGCTTTATCTGTGATGGCATATGAATATCCGTC-C 416
Query 501 -ATAAGATCTCAGTGTACGTATCGGACGATGGAGGATCTTCCTTGACTTTGTTTGCTCTT 559
|||||||||| || || |||||||||||||||||||| || ||||||||||||||||||
Sbjct 417 GATAAGATCTCGGTCTATGTATCGGACGATGGAGGATCGTCGTTGACTTTGTTTGCTCTT 476
Query 560 ATGGAGGCTGCCAAGTTCTCTAAGCATTGGTTGCCCTTTTGCAAGAATAACAATGTTCAA 619
||||||||||| || |||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct 477 ATGGAGGCTGCTAAATTCTCTGAGCATTGGTTGCCCTTTTGCAAGAAGAACAATGTTCAA 536
Query 620 GATCGCTCTCCTGAAGTTTATTTTTCTTCAAAGTCACATTCTTCG-AGTGATGAAGCTGA 678
||||| ||||||| ||||||||| |||||||||||| ||||| || |||| |||||||||
Sbjct 537 GATCGGTCTCCTGCAGTTTATTTCTCTTCAAAGTCAGATTCT-CGGAGTGGTGAAGCTGA 595
Query 679 AAATCTTAAG----A--TG-A-----TG-T--ACGAAGACATGAAGAGTAGAGTCGAACA 723
|||| ||||| | || | || | | |||||||||||||||||||| |||||
Sbjct 596 AAATATTAAGTGTGAGGTGGAACAGATGATGTATGAAGACATGAAGAGTAGAGTAGAACA 655
Query 724 TGTGGTCGAGAGCGGAAAAGTTGAGACTGCGTTTATCGCATGCGATCAATTTAGTTGTGT 783
|||||| ||||| ||||||||||||||||| |||||| ||| |||||||||| || | ||
Sbjct 656 TGTGGTGGAGAGTGGAAAAGTTGAGACTGCATTTATCACATACGATCAATTTCGTGGGGT 715
Query 784 GTTCGATCTGTGGACAGATAAATTCACTCGTCATGACCATCCTACCATTATT-ATG-GT- 840
|||||| ||||||| || ||||||||||||||||||||||| || |||||| | | ||
Sbjct 716 ATTCGATTTGTGGACCGACAAATTCACTCGTCATGACCATCCCACAATTATTCAGGTGTT 775
Query 841 GC----TAC--A-ACATA-ACG-A-AA--C-AGA--G-ATG-A-TGCCAAACCTTATATA 882
|| || | ||| | | | | || | | | | || | |||||||||| || ||
Sbjct 776 GCAAAATAGTGAGACAGATATGGACAATACCAAAAAGTATATAATGCCAAACCTAATCTA 835
Query 883 TGTTTCAAGAGAAAAGAGTAAAGTTTCACCACATCATTTCAAAGCCGGTGCTCTTAATAC 942
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 836 TGTTTCAAGAGAGAAGAGTAAAGTTTCACCACATCATTTCAAAGCCGGTGCTCTTAATAC 895
Query 943 TTTGTTACGTGTATCTGCCGTGATGAC 969
|||| |||| || |||| || |||||
Sbjct 896 TTTGCTACGAGTGTCTGGAGTCATGAC 922
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 91759400205
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5