BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G24560.1
Length=3721
Score E
Sequences producing significant alignments: (Bits) Value
Ahg492386 jgi|Araly1|492386|fgenesh2_kg.7__1819__AT4G24560.1 5622 0.0
> Ahg492386 jgi|Araly1|492386|fgenesh2_kg.7__1819__AT4G24560.1
Length=3684
Score = 5622 bits (3044), Expect = 0.0
Identities = 3515/3733 (94%), Gaps = 70/3733 (2%)
Strand=Plus/Plus
Query 1 AAAAGCAAAGCGTCTTGGTATAGAAAAGTAATATACTGC-CTCCTAATTTCTTCGTCCTT 59
||||||||||||||||||| |||||||||||||| || | |||||| ||||||| |||||
Sbjct 1 AAAAGCAAAGCGTCTTGGTTTAGAAAAGTAATATCCTCCTCTCCTATTTTCTTCCTCCTT 60
Query 60 CTACCGAAGAATCTCTCCACTCTTGCCCTCTTTCGAAACCCTAAACCAGAAGCACCA--- 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GTACCGAAGAATCTCTCCACTCTTGCCCTCTTTCGAAACCCTAAACCAGAAGCACCACCA 120
Query 117 GATTTTTTCAACTTTTTCCCAGAGAACAATAGAAAACCCAACTTGTGCTCTCTAGGGTTT 176
|| |||||||||||||| | |||||||||||||||||||||||||||||||| |||||||
Sbjct 121 GAATTTTTCAACTTTTTTC-AGAGAACAATAGAAAACCCAACTTGTGCTCTCGAGGGTTT 179
Query 177 TCTTTATTCCTTCTCATCTTTGGATTTTCTTGGGTCATCATTTTGGAAGCTTACCCACCA 236
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 180 TCTTTATTCCT-CTCATCTTTGGATTTTCGTGGGTCATCATTTTGGAAGCTTACCCACCA 238
Query 237 GCGAAAAAATTATAACTTCCATCGATTCCTGGCTtctctctctcgctctctctGCATGTG 296
|||||| || || | | | || |||||||||| || |||||
Sbjct 239 GCGAAACGAT-----CT-C--T-G------GG-TTCTCTCTCT-GC---------ATGTG 272
Query 297 CTAAATCGCCGGACTGATCCTCACTGTCACCTCTGTTCCCGGCTTATTCGCCGGTGAAAT 356
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 273 CTAAATCGCCGGACTGATCCTCACTGTCACCTCTGTTCCCGGCTAATTCGCCGGTGAAAT 332
Query 357 CTATGGTTGGTGCTCAGATTTATTTCCAATTGTTTGTGCATCTGGTGGAGGATAAATGCT 416
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 333 CTATGGTTGGTGGTCAGATTTATTTCCAATTGTTTGTGCATCTGGTGGAGGATAAATGCT 392
Query 417 CCTTGTTTTGGATCTAGGGATTTCTAGTCTAGTCCTTGTGGTCTCTCTTGTTTTACCTTT 476
|||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||| |
Sbjct 393 CCTTGTTTTGGATCTAGGGATTTCTAGTCTAGTCCTTGTGATCTCTCTTGTTCTGCCTCT 452
Query 477 GATCGGTCTCTTTGTTCGTCACAAATGGAGGGTCGCTGCCCAAAGAAGGGAGGAGATTAG 536
|||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 453 GATCGGCCTCTTTGTTCGTCACAAATGGAGGGTCGCTGCCCAAAGGAGGGAAGAGATTAG 512
Query 537 AAGACTTCTTATTCATGCTTCTGAAGAGGCTGCCAGGGCTGAGCTAGAGGCCTCTGTTGA 596
||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||
Sbjct 513 GAGACTTCTTATTCATGCGTCTCAAGAGGCTGCTAGGGCTGAGCTAGAGGCCTCTGTTGA 572
Query 597 GTTCTCTTCTGTTGCCGTCTCTAATGTCTTCCATTGTCCTGTTTGCTATTGTCTTGCCAC 656
|||||||||||| ||| ||||||||||||||||||||||||| || ||||||||||||||
Sbjct 573 GTTCTCTTCTGTGGCCATCTCTAATGTCTTCCATTGTCCTGTGTGTTATTGTCTTGCCAC 632
Query 657 GACTCGTTGCTCTCGCTGCAAAGCCGTTCGATATTGTTCCGGGAAATGTCAAATCATTCA 716
|||||| ||||||||||||||| | |||||||||||||| ||||||||||||||||||||
Sbjct 633 GACTCGATGCTCTCGCTGCAAATCGGTTCGATATTGTTCGGGGAAATGTCAAATCATTCA 692
Query 717 CTGGCGGCAAGGTCACAAAGATGAATGTCATCCTGCTTCCATTGTATATGATAGTGAAGA 776
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 693 CTGGCGGCAAGGTCACAAAGATGAATGTCGTCCTGCTTCCATTGTATATGATAGTGAAGA 752
Query 777 TGAGA---GTGATTCCGATTTGAGATT-AGGAGAAGAAAATGGACAAAATACTCCTGAGG 832
||||| ||||||| |||||||||| || ||||||||||| || ||||||| |||||
Sbjct 753 TGAGAAAAGTGATTCTGATTTGAGATCCAG-AGAAGAAAATGAACGGAATACTCATGAGG 811
Query 833 AAACTTTACTGGTGGGTCCAGAACCAGTTACTATACCAATCGGGGAATCACTATTATCTA 892
||||||||||| ||| |||||||||||||||||||||||| |||||| || ||||||||
Sbjct 812 AAACTTTACTGCTGGATCCAGAACCAGTTACTATACCAATTGGGGAAACAATATTATCTG 871
Query 893 ATCGTGCCAGATCTCCTGAAGATGGGAATGGAGATATTGCAGATAACAAAGATGACCTTA 952
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 872 ATCCTGCCAGATCTCCTGAAGATGGGAATGGAGATATTGCAGATAACAAAGATGACCTCA 931
Query 953 TAGATAAGGAAGAAGCTGTTTCTGTTGCTGAAACATCTGGATCCTCGTTTTCTGGCTTCT 1012
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 932 TAGATAAGGAGGAAGCTGTTTCTGTTGCTGAAACATCTGGATCCTCGTTTTCTGGCTTCT 991
Query 1013 CCTCCTCCCCCCGTAATGACTCTGGCGACGAGATTTCTCGTTGTGAGAGCTTCAGTTCAT 1072
||||||||||||||||||||||||| || |||||||||| |||||||||||| |||||||
Sbjct 992 CCTCCTCCCCCCGTAATGACTCTGGTGATGAGATTTCTCTTTGTGAGAGCTTTAGTTCAT 1051
Query 1073 CTGAATCCGAGAGATCAGAGTCCCTACTTGATGCTCATGTCTCTGTAGAGCCAGAAGACA 1132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1052 CTGAATCCGAGAGATCAGAGTCCCTACTTGATGCTCATGTCTCTGTAGAGCCAGAAGACA 1111
Query 1133 CCTGTTTCAGCACCATTGAAGATGCTCCATCCAAACTGTTGTCTCCAAAATTTGTGCACT 1192
|||||||||||||||| || |||||||||||||||||||||||||| |||||||||||||
Sbjct 1112 CCTGTTTCAGCACCATCGATGATGCTCCATCCAAACTGTTGTCTCCTAAATTTGTGCACT 1171
Query 1193 TGGTTGAATCTGTAGATAATCTCGCTAATCTGCCTAAATTAAGTGTACATAAACCTGAGG 1252
||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||
Sbjct 1172 TGGTTGAATCTGTAGATAACCTCGCTAATCTGCCTAAATTAAGTGTACATAAGCCTGGGG 1231
Query 1253 ATGATGCTGGGCAGAACCAGAGCCAATCAAGGAGCTTACACTCATTAGTTACGGATAGGC 1312
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1232 GTGATGCTGGGCAGAACCAGAGCCAATCAAGGAGCTTACACTCATTAGTTACGGATAGGC 1291
Query 1313 ATCCAGTATC-AGCTGACCCATCTC-TG-AA-GTCATCTGATTTTTGGGGTACGGCTCTT 1368
|||||||||| | |||||||||||| | || ||||||||||||||||||||||||||||
Sbjct 1292 ATCCAGTATCCA-CTGACCCATCTCCTCTAAAGTCATCTGATTTTTGGGGTACGGCTCTT 1350
Query 1369 GGATCAGCCGAACGTGTGAGTGATTCTTGTGTTAAATCTAAATCTGGTAGACCTGGTAAC 1428
|||||||| |||||||| ||||| ||||||| ||||||||||||||||||||||||||||
Sbjct 1351 GGATCAGCAGAACGTGTAAGTGAGTCTTGTGATAAATCTAAATCTGGTAGACCTGGTAAC 1410
Query 1429 TCCTCTCTGCATTTCTCCTTTGGCTCTGGCTCCTCTAGAGACACCTCAGCTGCTAAAGTT 1488
|||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||
Sbjct 1411 TCCTCTCTGCATTTCTCCTTTGGCTC---CTC-T--AGAGACACCTCAGCTGCTAAAGTT 1464
Query 1489 TCTGAGCAGAGGAGTAGCATTTTAAAAGAAGCTCCTAGGGGGACTGG-TTATATATCTGA 1547
|||||||| | || ||||||||||||||||||||||| | ||| ||| | |||
Sbjct 1465 TCTGAGCACAAAAGGAGCATTTTAAAAGAAGCTCCTAGTG---CTGCATTAGGGA-CTGG 1520
Query 1548 TGGAGTAAACTTAAGAGAAAGAAATGCTAAAAGATTTGATGAAGCTGAAATTGCATTACC 1607
| | ||| || || ||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1521 TA-A-TAATCTAAA-AGAAAGAAATGCTAAAATATTTGATGAAGCTGAAATTGCATTACC 1577
Query 1608 AATTTCCTCTTCTACTGATGCGCTGAGTCCTTTGGACTCTTCTAATTTGTCCCATGTGAC 1667
|| |||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||||
Sbjct 1578 AACTTCCTCTTCTACTGATGCGCCGAGTCCTTTGGACACTTCTAATTTGCCCCATGTGAC 1637
Query 1668 CCTTCCGAAGTCAAAGAGCGCTAGTAGTGAAAATGGCTCTATGTTGGCCCCTTTGAAGGT 1727
||||| ||||| ||||||||| |||||||||||||||| |||||||||||||||||||||
Sbjct 1638 CCTTCAGAAGTTAAAGAGCGCCAGTAGTGAAAATGGCTGTATGTTGGCCCCTTTGAAGGT 1697
Query 1728 TGGGGAAGTCCAACTTTTGGCATCCAAGGCCTCGAATACCAAGAAGTGTGCTGATCTTAT 1787
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1698 TGGGGAAGTCCAACTTTTGGCATCCAAGGCCTCGAATACCAAGGAGTGTGCTGATCTTAT 1757
Query 1788 GAAGCATTCTCCTTTAGGTGCAAAATCGGTAAGAGTTCTTGATCATCAGAAACAGAATGG 1847
||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1758 GAAACATTCTCCTCTAGGTGCAAAATCTGTAAGAGTTCTTGATCATCAGAAACAGAATGG 1817
Query 1848 TGCTGTCGTTCAGCATATAAATTCTCTACATGGAAGAAGTGGTTTAAAGGCATCAGTACT 1907
||||| |||||| | ||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 1818 TGCTGCCGTTCACCGTATAAGTTCTCTACATGGAAGAAGTGGTTTGAAGGCATCAGTACT 1877
Query 1908 GAAAGTTGTAGACCAGTGGACCAGACCGAAGTCTGAAAATGAGATGGCAGGAAGACATGG 1967
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1878 GAAAGTTGTAGACCAGTGGACTAGACCGAAGTCGGAAAATGAGATGGCAGGAAGACATGG 1937
Query 1968 TCATAAGGGGCTCTTTCCATATGAAGTCTTTGCTAAACTGTATACATA-TAAAATTGAGT 2026
|||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||
Sbjct 1938 TCATAAGGGGCTCTTTCCATATGAAGTCTTTGCTAAGCTGTATACA-AGTAAAATTGAGT 1996
Query 2027 TCCAGCCTTGTGGCCTCATCAACGTTGGCAATAGCTGCTTTGCTAATGTTGTCTTTCAAT 2086
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1997 TCCAGCCTTGTGGCCTCATCAACGTTGGCAATAGCTGCTTTGCTAATGTTGTCTTCCAAT 2056
Query 2087 GCCTTATGTTCACTCCTCCTCTGACGACATACTTCCTCCAGCAATTTCATTCCAGAGCAT 2146
|||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 2057 GCCTGATGTTCACTCCTCCTCTGACGACATACTTCCTCCAGCAACTTCATTCTAGAGCAT 2116
Query 2147 GTACaaaaaaaGAACAGTGCTTCACCTGTGGGTTTGAGAAGCTGGTCGTAAAGGCAAAAG 2206
||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||
Sbjct 2117 GTACAAAAAAAGAACAGTGCTTCACCTGTGGATTTGAGAAGCTGGTCTTGAAGGCAAAAG 2176
Query 2207 AAGAGAAGTCTCCACTGTCCCCTAATGGCTTGCTATCTCAGCTGCAGAATATTGGAATCT 2266
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2177 AAGGGAAGTCTCCACTGTCCCCTAATGGCTTGCTATCTCAGCTACAGAATATTGGAATCT 2236
Query 2267 TTCTTGGGAATGGCAAGGAAGAAGATGCACATGAATTCCTTAGGTTTGTTGTCGATACAA 2326
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2237 TTCTTGGGAATGGCAAGGAAGAAGATGCACATGAATTCCTTAGGTTTGTTGTCGATACAC 2296
Query 2327 TGCAGTCTGTGTGCATTAAGGCATCTGAATATGATATGACCAAGAGTAGCAAATTAGAAG 2386
||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2297 TGCAGTCCGTGTGCATTAAGGCATCTGAATATGATATGCCCAAGAGTAGCAAATTAGAAG 2356
Query 2387 ATACAACTCTTATTGGTTTGACATTTGGGGGATACCTCCGGTCAAAGATTAAATGCATGA 2446
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2357 ATACAACTCTTATTGGTTTGACATTTGGGGGATACCTCCGATCAAAGATTAAATGCATGA 2416
Query 2447 AATGTCAAGTAAAATCTGAGCTGCGTGAGAAAATGATGGATCTAACGGTTGAGATTGATG 2506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2417 AATGTCAAGTAAAATCTGAGCTGCGTGAGAAAATGATGGATCTAACGGTTGAGATTGATG 2476
Query 2507 GAGATATTAGCACCCTGGATGATGCTTTGCGTCGATTTACAAGGACTGAGATATTGGATG 2566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2477 GAGATATTAGCACCCTGGATGATGCTTTGCGTCGATTTACAAGGACTGAGATATTGGATG 2536
Query 2567 GAGAGAACAAATACAGATGTGGCAGCTGTAAATCCTATGAGAGAGCCAAAAAGAAGCTGA 2626
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2537 GAGACAACAAATACAGATGTGGCAGCTGTAAATCCTATGAGAGAGCCAAAAAGAAGCTGA 2596
Query 2627 AAATAACAGAGCCTCCGAATGTCCTTACCATTGCACTAAAACGATTCCAGGCAGGGAAAT 2686
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2597 AAATTACAGAACCTCCGAATGTCCTTACCATTGCACTAAAACGATTCCAGGCAGGGAAAT 2656
Query 2687 TCGGGAAGCTCAATAAGTTGATTAGGTTTCCAGAAACTCTAGATTTGGCTCCATATGTCA 2746
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2657 TCGGGAAGCTCAATAAGTTGATCAGGTTTCCAGAAACTCTAGATTTGGCTCCATATGTCA 2716
Query 2747 GTGGGGGAAGTGAAAAATCACATGACTACAAACTCTATGGAGTTATTGTTCACTTGGATG 2806
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2717 GCGGGGGAAGTGAAAAATCACATGACTACAAACTCTATGGAGTTATTGTTCACTTGGATA 2776
Query 2807 TAATGAATGCAGCATTTTCTGGCCATTATGTCTGCTATATTAGAAACCAAAATAAGTGGT 2866
||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||
Sbjct 2777 TAATGAATGCAGCATTTTCTGGCCACTATGTCTGCTATATTAGAAATCAAAATAAGTGGT 2836
Query 2867 ACAAGGCTGATGATAGCACGGTAGTAACTTCGGATGTGGAAAGGATCTTGACAAAGGGAG 2926
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 2837 ACAAGGCTGATGATAGCACGGTAGTAACTTCGGATGTTGAAAGGATCTTGACAAAGGGAG 2896
Query 2927 CGTATATGTTGTTCTACGCAAGGTGCACTCCAACGCCTCCAAGATTAGCAGTATGTACCA 2986
||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 2897 CGTATATGTTGTTCTACGCAAGGTGCACTCCAATGCCTCCAAAATTAGCAGTATGTACCA 2956
Query 2987 AAACTGAAGCATCCAATaaaaaaaGCAGAGTGCCACTACCTAAGGCTAATGAGAAAAGTA 3046
|||||||||||||||| |||| ||||||||||||| ||||||||||||| ||||||||||
Sbjct 2957 AAACTGAAGCATCCAACAAAAGAAGCAGAGTGCCAGTACCTAAGGCTAAAGAGAAAAGTA 3016
Query 3047 CCATATCC----C--GGTCTGTGTCTACTTCAAGTCCTGAGTTGTCTTCCAACACGCCTG 3100
|||||||| | |||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 3017 CCATATCCATGTCACGGTCTGTGTCTACTTCAAGTCCTGTTTTGTCTTCCAACACGCCCG 3076
Query 3101 GTGGTGGTCGATCCGGCAATATACAGTCATTTTATTCTAGTTTCCAGAGGCTGCAGAAGA 3160
||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct 3077 GTGGT---CGATCTGGCAATATACAGTCATTTTATTCCAGTTTCCAGAGGCTGCAGAAAA 3133
Query 3161 TTTTAGAAGAAGACTCGGCGAGTGACAGTTCATCTCTCTTTGACAGCAACTCAGATGAAT 3220
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3134 TTTTAGAAGATGACTCGGCGAGTGACAGTTCATCTCTCTTTGACAGCAACTCAGATGAAT 3193
Query 3221 GCTCTTGTAGCACAGACAGTACAAGCATGGACGACTTTGCTGATTTCATTTTTGGAGATC 3280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3194 GCTCTTGTAGCACAGACAGTACAAGCATGGACGACTTTGCTGATTTCATTTTTGGAGATC 3253
Query 3281 ATCAGGGACGGGCTCACGGACAGTCTGAGACTCCCTCACCAACATCATCGTCTTCCTCAT 3340
||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct 3254 ATCAGGGACGGGCCCACGGACAGTCTGAGGCTCCCTCACCAACATCATCGTCTTCCTCGT 3313
Query 3341 CTTCTCCCCCCTTCACAAGGCGTTCGCCGCTCAGTCGTTCTTCTCCAGAAACTTACGGAA 3400
||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||||
Sbjct 3314 CTTCTCCTCCCTTCACAAGGCATTCGCCGCTCAGTCGTTCATCTCTAGAAACTTACGGAA 3373
Query 3401 CCTCAAGACATCAGTTGCCCTTGGGAGGAGAAAGGTAAGGGAAACAA-GATGGTTTTTTG 3459
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3374 CCTCAAGACATCAGTTGCCCTTGGGAGGAGAAAGGTAAGGGAAACAACGATGGTTTTTTG 3433
Query 3460 TCCACTTGGCCCCAACTAAGTCAAAAGTAGTAGAAGAAAGTAGATTTGATTACACGTAGA 3519
|||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||
Sbjct 3434 TCCACT-GGCCCCAACTAAGTCAAAT-TAGTAGAAGAAAGTAGATTTGATTACATGTAGA 3491
Query 3520 TTGAGTGGTTTTATTAACAACCCGTATTTAGGCTTGGTGAAAGTGGTTAATGAGAGAAGT 3579
| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 3492 TGGAGTGGTTTTATTAACAACCCGTATTTAGGCTTGGTGAAAGTGGTTAACGAGAGAACT 3551
Query 3580 GGTGGTATATAGTAGTGTATAGTGGGGAAGAGAGTTTTTGCCCATGAAATTGTATCACGT 3639
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3552 GGTGGTATATAGTAGTGTATAGTGGGGAAGAGAGATTTTGCCCATGAAATTGTATCACGT 3611
Query 3640 AATGGAACGGAATTTACCTTTGTTAATAAGTTGTTTTGACTTTTATTATAATCAATCAAT 3699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3612 AATGGAACGGAATTTACCTTTGTTAATAAGTTGTTTTGACTTTTATTATAATCAATCAAT 3671
Query 3700 AAAGCTAATCTAA 3712
|||||||| ||||
Sbjct 3672 AAAGCTAAGCTAA 3684
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 140584674662
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5