BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G25730.1
Length=2755
Score E
Sequences producing significant alignments: (Bits) Value
Ahg492249 jgi|Araly1|492249|fgenesh2_kg.7__1682__AT4G25730.1 4150 0.0
Ahg943314 jgi|Araly1|943314|scaffold_603858.1 2736 0.0
> Ahg492249 jgi|Araly1|492249|fgenesh2_kg.7__1682__AT4G25730.1
Length=2628
Score = 4150 bits (2247), Expect = 0.0
Identities = 2509/2636 (95%), Gaps = 16/2636 (1%)
Strand=Plus/Plus
Query 1 AATTGCTATTTCTCTGCCTCCGTGTGCTGAGAACCAG-AACGAAACCCTAGCAAAATATC 59
|||||||||||||| | ||| | ||| |||| ||| | ||||||||||||||||||| ||
Sbjct 1 AATTGCTATTTCTCCGTCTCTGCGTGTTGAGGACC-GAAACGAAACCCTAGCAAAATCTC 59
Query 60 GCCATGGGTAAGGTCAAAGGAAAGCATCGTTTGGATAAGTACTATCGTCTCGCTAAGGAA 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 60 ACCATGGGTAAGGTCAAAGGAAAGCATCGTTTGGATAAGTACTATCGTCTCGCTAAGGAA 119
Query 120 CGTGGATTCCGTTCTCGAGCTTCCTACAAGCTTCTTCAGCTCGACGCCAAGTACTCTCTT 179
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 120 CGTGGATTCCGTTCTCGAGCTTCCTACAAGCTTCTCCAGCTCGACGCCAAGTACTCTCTT 179
Query 180 CTCCACTC-AGCTCATGCCGTTCTCGATCTCTGCGCCGCCCCTGGTGGTTGGATGCAAGT 238
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 CTCCACTCTTG-TCATGCCGTTCTCGATCTCTGCGCCGCCCCTGGTGGTTGGATGCAAGT 238
Query 239 CGCCGTCGAGAAAGTTCCCGTCGGCAGCCTCGTTCTCGGTATCGATCTTGTCCCGATTCT 298
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 239 CGCCGTCGAGAAAGTTCCCGTCGGCAGCCTTGTTCTCGGTATCGATCTTGTTCCGATTCT 298
Query 299 CCCTGTTCGTGGCTGTGTTACTATGACGCAAGATATCACAAGGACTGAGTGTAAATCGAA 358
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 299 CCCTGTGCGTGGCTGTGTTACTATGACGCAAGATATCACAAGGACTGAGTGTAAATCGAA 358
Query 359 GATCAAGCAAGTGATGGAGCAGCATGGTGTTAGTGCTTTTAATTTGGTTCTGCACGATGG 418
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 359 GATCAAGCAAGTGATGGAGCAGCATGGTGTTAGTGCTTTTAATTTGGTTTTGCACGATGG 418
Query 419 GTCTCCAAATGTTGGTGGTGCGTGGGCACAAGAGGCTATGAGCCAGAACGCTTTGGTTAT 478
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 419 GTCTCCAAATGTTGGTGGTGCGTGGGCTCAAGAGGCTATGAGCCAGAACGCTTTGGTTAT 478
Query 479 TGATTCTGTTAGATTAGCCACTGAGTTCTTAGCTCGCAACGGGAATTTAGTCACCAAGGT 538
|||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct 479 TGATTCTGTTAGATTAGCCACTGAGTTCTTAGCTCGTAACGGGAATTTAATCACCAAGGT 538
Query 539 TTTCAGGTCTCGAGACTACAACTCTGTGCTCTACTGTCTTGGGAGGCTGTTTGAAAAAGT 598
||||||||||||||| |||||| ||||||||||||||||||||||||||||||| || ||
Sbjct 539 TTTCAGGTCTCGAGATTACAACGCTGTGCTCTACTGTCTTGGGAGGCTGTTTGAGAAGGT 598
Query 599 TGAAGTGTTTAAGCCGCCGGCTAGTCGTTCAGCATCTGCAGAAACATATCTTGTGGGTTT 658
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 599 TGAAGTGTTTAAGCCACCGGCTAGTCGTTCAGCATCTGCAGAAACATATCTTGTGGGTTT 658
Query 659 GAAATACTTAGCCCCTGCCAAGATTGATCCCCGTCTTCTTGATTATAGACATCTCTTTAA 718
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 659 GAAATACCTAGCCCCTGCCAAGATTGATCCCCGTCTTCTTGATTATAGACATCTCTTTAA 718
Query 719 GGAGTCAGCAGAACCCACGAGAAAGGTGGTGGATGTGCTTGGAGGATCAAAACAAAAGAG 778
|||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 719 GGAGGCAGCAGAGCCCACGAGAAAGGTGGTGGATGTGCTTGGAGGATCAAAACAGAAGAG 778
Query 779 AAACCGTGATGGGTATGAAGATGGGGAGTCCATTTTGAGAAGAGTTGCATCTGCTGCTGA 838
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 779 AAACCGTGATGGGTATGAAGATGGAGAGTCCATTTTGAGAAGAGTTGCGTCTGCTGCTGA 838
Query 839 TTTCATTTGGTCTGAAAATCCTCTTGACGTTCTTGGCACGACTACTTCCATATCATTTGA 898
|||||||||||||||||||||||| || |||||||||||| |||||||||||| |||||
Sbjct 839 TTTCATTTGGTCTGAAAATCCTCTCGAGGTTCTTGGCACGGTTACTTCCATATCCTTTGA 898
Query 899 TGATCAAGCCTCTCTACCTTTAAAGGAACATGATTTGACGACAGAGGAGATTAAAATTCT 958
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct 899 TGATCAAGCCTCTCTACTTTTAAAGGAACATGATTTGACGACTGAGGAGATTAAAATTCT 958
Query 959 ATGCGATGATCTTCCTGTCTTGGGGAAGAATGACTTCAAGCATATCCTAAAATGGCGAAT 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 ATGCGATGATCTTCCTGTCTTGGGGAAGAATGACTTCAAGCATATCCTAAAATGGCGAAT 1018
Query 1019 GCAAATCAGGAAAGCTCTGACTCCTGAGAAAAAGGAAGTTGCTAAACCTGAGCCTGATGT 1078
|||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 1019 GCAAATCAGGAAAGCTCTTACTCCTGAAAAAAAGGAAGTTGCTAAACCTGAGCCTGATGC 1078
Query 1079 GGGAAAGGAAGATGAGGAAAATGAAGATGATAAACTACTCAATGAATTGGAAGAGCTGAC 1138
|| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1079 GGAAAAGGAAGATGAGGAAAATGAGGATGATAAACTACTCAATGAATTGGAAGAGCTGAC 1138
Query 1139 AAACACAGTTGACCGCAAGAAGAAACAGGCAAAGAAGATTCTTGCAAAACGAAGGGCTAA 1198
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1139 AAACACAGTCGACCGTAAGAAGAAACAGGCAAAGAAGATTCTTGCAAAACGAAGGGCTAA 1198
Query 1199 GGACAAGGCGCGGAAGGCGACTGGTCCACAGATGGATGTACTTGAAGATGGTT-TCGTCG 1257
||| ||| | |||||||||||| ||||||||||||||||||||||||||||| | ||||
Sbjct 1199 GGATAAGACACGGAAGGCGACTAATCCACAGATGGATGTACTTGAAGATGGTTAT-GTCG 1257
Query 1258 ACAATGAATTGTTCTCTCTTAATGCTATCAAGGGAAAGAAAGATCTAATGGCAGTTGACA 1317
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1258 ACAATGAATTGTTCTCTCTTGCTGCTATCAAGGGAAAGAAAGATCTAATGGCAGTTGACA 1317
Query 1318 ATGATGAAGATGATAATGGCAATGCCGTTGACAGTGAGAACGAAGACCATGGCGAAGGAG 1377
|||| || |||||| |||||||||| | |||||| ||||||||||||| ||| || ||||
Sbjct 1318 ATGACGATGATGATGATGGCAATGCTGATGACAGCGAGAACGAAGACCGTGGTGAGGGAG 1377
Query 1378 CTTCAGATGACTCCAAAGACAGTGACAGAGATTCTGATGAAGAACGTCAGAAATACACTG 1437
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 1378 CTTCAGATGACTCCAAAGACAGTGACATAGATTCTGATGAAGAACGTCAGAAGTACACTG 1437
Query 1438 AACAAATGGAAGAGATTTTTGA-GCAGGCATATGAGCGGTATATGGTGAAGAAAGAAGGA 1496
|||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||
Sbjct 1438 AACAAATGGAAGAGATTTTTGATG-AGGCATATGAGCGATATATGGTGAAGAAAGAAGGA 1496
Query 1497 AGCGCAAAGCAAAGGAAGCGGGCTAGGCAGGCCCATGCTGAAAAGCTGGAGGAAGGTGAT 1556
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1497 AGCGCAAAGCAAAGGAAACGGGCTAGGCAGGCCCATGCTGAAAAGCTGGAGGAAGGTGAT 1556
Query 1557 GGAGATGAAGAAATGAAGATCGATTACGATTCAGATATGAATGAAGAAAAGGATGAGGCA 1616
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct 1557 GGAGATGAAGAAATGAAGATCGATTACGATTCAGATCTGAATGAAGAAAAAGATGAGGCA 1616
Query 1617 AACCCTCTTGTTGTACCACTTGATGATGGAGTGGTCCAAACAAAGGAGGAAATATCCAAC 1676
||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 1617 AACCCTCTTGTGGTACCACTTGATGATGGTGAGGTCCAAACAAAGGAGGAAATATCCAAC 1676
Query 1677 CAGTGGTTCAGTCAGAATATATTTGCAGAAGCCGTGGAAGAAGGAGACTTGGGAAAAGAT 1736
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1677 CAGTGGTTCAGTCAGAATATATTTGCAGAAGCCGTGGAAGAAGGAGACTTGGGAAAAGAT 1736
Query 1737 GACAGTGAAGACGAAATAGCAAATAAGAAAAAGAGCAAAAATCTGTCTAAACCAGACAAG 1796
||| |||||||||||| | || | |||||||||||||||||||||||||||||||||||
Sbjct 1737 GACGGTGAAGACGAAACACCAGTTGAGAAAAAGAGCAAAAATCTGTCTAAACCAGACAAG 1796
Query 1797 TCAAAGCAGAAGGCTTCAAAAGCAAG-TGTGTTGTCTGATCAGAGCTTGCCCAATAGCTC 1855
||||| |||||||| ||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 1797 TCAAATCAGAAGGCATCAAAAGCAAGCT-TGTTGTCTGATCAGAGCTTGCCCAATAGCTC 1855
Query 1856 CAAGAAGGAAGATGAGTTTGAGGTAGTCCCTGCACCAGCCACAGATTCTGACTCAGATTC 1915
|||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1856 TAAGAAGGAAGATGATTTTGAGGTAGTCCCTGCACCAGCCACGGATTCTGACTCAGATTC 1915
Query 1916 ATCCTCTGAAGATGATGTTCATACCAAGGCCGAGATACTGGCATGTGCCaaaaaaaTGCT 1975
||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 1916 ATCCTCTGATGATGATGTTCATACAAAGGCCGAGATACTGGCATGTGCCAAGAAAATGCT 1975
Query 1976 GAGGAAGAAGCAGAGAGAACAGATGCTTGATGATGCATATAACAAACACATGTTTGTAGA 2035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1976 GAGGAAGAAGCAGAGAGAACAGATGCTTGATGATGCATATAACAAACACATGTTTGTAGA 2035
Query 2036 TGAAGGTTTACCAAAATGGTTTGTGGATGACGAGAAGCAGCACAGACAACCAATGAAACC 2095
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2036 TGAAGGTTTACCCAAATGGTTTGTGGATGACGAGAAGCAGCACAGACAACCAATGAAACC 2095
Query 2096 TGTTACGAAAGATGAAGTTAATGCAATGAAAGCACAGTTCAAAGAGATCAATGCTCGTCC 2155
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2096 CATAACGAAAGAAGAAGTTAATGCAATGAAAGCACAGTTCAAAGAGATCAATGCTCGTCC 2155
Query 2156 AGCCAAGAAGGTGGCAGAGGCCAAGGCACGGAAGAAGCGAGCTGCCCAGAAAAGATTGGA 2215
||||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||
Sbjct 2156 AGCCAAGAAGGTGGCCGAGGCAAAAGCACGGAAGAAGCGAGCTGCCCAAAAAAGATTGGA 2215
Query 2216 GAAAGTGAGGAAGAAGGCAAACACAATATCTGACACAGCAGATATATCAGACCGTTCAAA 2275
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2216 GAAAGTGAGGAAGAAGGCAAACACAATATCTGACACAGCAGATATCTCAGACCGTTCAAA 2275
Query 2276 GGACAAGATGATAGACAAGCTATACAAGAAAGCAGCAGAGCCAAGAAAGCCAAGGAAAGA 2335
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2276 GGACAAGATGATAGACAAGCTATACAAGAAAGCAGCAGAGCCAAGAAAGCCTAGGAAAGA 2335
Query 2336 ACTGGTTGTGTCTAAGAAAGG-AGTTGGGGTTAAAGTTGGTAAGGGACAGAAGAGAGTGG 2394
||||||||||||||| ||||| |||||||||||| ||||| || ||||||||||||||||
Sbjct 2336 ACTGGTTGTGTCTAA-AAAGGGAGTTGGGGTTAAGGTTGGGAAAGGACAGAAGAGAGTGG 2394
Query 2395 ATAGGAGGATGAAGAGTGATGATAGGAAACGTGGGGGAGGAAAGCCCGGTAGGAACGGGC 2454
||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||
Sbjct 2395 ATAGGAGGATGAAGAGTGATGCTAGGAAGCGTGGGGGAGGAAAGCCCGGCAGGAACGGGC 2454
Query 2455 AGAAGGGCACTGGTAAAGCAGGCCAGAAAGGAAAAAGGCCTGCTGGGAAACCTCG-GGGA 2513
|||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||
Sbjct 2455 AGAAGGGCACTGGTAAAGCAGGCCAGAAAGGAAAAAGGCCGGCTGGGAAACCACGAGGGA 2514
Query 2514 AGGAAACCCGGGTAAGACCTCAATGTCGAATGAGGCGAACAGGAAGTTTTGTTAC-GTAT 2572
|| |||||||||||||||||||||||||||||||||||| |||||||||||| || ||||
Sbjct 2515 AG-AAACCCGGGTAAGACCTCAATGTCGAATGAGGCGAAAAGGAAGTTTTGT-ACCGTAT 2572
Query 2573 TTTAATTTAAGTTTTGGCAATTCTTGACTTCTGGATTTACTTGTTTACTCTGATAA 2628
|||| ||| | ||||||||||| ||||||| ||||||| || || |||| |||||
Sbjct 2573 TTTAGTTTGATTTTTGGCAATTTTTGACTTATGGATTTTGTTCTTAACTCAGATAA 2628
> Ahg943314 jgi|Araly1|943314|scaffold_603858.1
Length=2456
Score = 2736 bits (1481), Expect = 0.0
Identities = 2160/2477 (87%), Gaps = 90/2477 (4%)
Strand=Plus/Plus
Query 61 CCATGGGTAAGGTCAAAGGAAAGCATCGTTTGGATAAGTACTATCGTCTCGCTAAGGA-A 119
||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |
Sbjct 20 CCATGGGAAAGGTCAAAGGAAAGCATCGTTTGGATACGTACTATCGTCTAGCTAAGGAGA 79
Query 120 CGTGGATTCCGTTCTCGAGCTTCCTACAAGCTTCTTCAGCTCGACGCCAAGTACTCTCTT 179
||||| |||||||||||||||| ||||||||||| ||||| |||||||||| | | ||
Sbjct 80 -GTGGACTCCGTTCTCGAGCTTCTTACAAGCTTCTCCAGCTTGACGCCAAGTTCAATTTT 138
Query 180 CTCCACTCAGCTCATG--CCGTTCTCGATCTCTGCGCCGC-CCCTGGTGGTTGGATGCAA 236
||||| || ||| | ||||||| ||||| ||||| || ||| |||||||||||||||
Sbjct 139 CTCCATTC--TTCAAGAACCGTTCTAGATCTTTGCGCTGCACCC-GGTGGTTGGATGCAA 195
Query 237 GTCGCCGTCGAGAAAGTTCCCGTCGGCAGCCTCGTTCTCGGTATCGATCTTGTCCCGATT 296
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 196 GTCGCCGTCCAGAAAGTTCCCGTCGGCAGCCTCGTTCTCGGTATCGATCTTGTTAAGATT 255
Query 297 -CTCCCTGTTCGTGGCTGTGTTACTATGAC-GCAAGATATCA--C-AAGGACTGAGTGTA 351
| ||| || ||||||||||| ||||| | ||| ||||||| | || || ||||| |
Sbjct 256 GC-CCCCGTGCGTGGCTGTGTCACTAT-CCAGCAGGATATCACGCGAACTACCGAGTGCA 313
Query 352 AATCGAAGATCAAGCAAGTGATGGAGCAGCATGG---TGTTAGTGCTTTTAATTTGGTTC 408
| ||||||||||| ||| || || ||||||| || || |||| || | ||||
Sbjct 314 AGGCGAAGATCAAGAAAGCCCTGAAGAAGCATGGTACTGATAAAACTTTCGATCTAGTTC 373
Query 409 TGCACGATGGGTCTCCAAATGTTGGTGGTGCGTGGGCACAAGAGGCTATGAGCCAGAACG 468
| ||||||||||||||||||||||||||||| ||| | ||||| ||||||||||| ||||
Sbjct 374 TACACGATGGGTCTCCAAATGTTGGTGGTGCATGGTCGCAAGAAGCTATGAGCCAAAACG 433
Query 469 CTTTGGTTATTGATT-CTGTTAGATTAGCCACTGAGTTCTTAGCT-CGCAACGGGAA-TT 525
||||||||||||||| || | | | | ||||| |||||||||||| | | | || || ||
Sbjct 434 CTTTGGTTATTGATTCCT-TGAAACTGGCCACAGAGTTCTTAGCTCCTC-ATGGAAACTT 491
Query 526 TAGTCACCAAGGTTTTCAGGTCTCGAGACTACAACTCTGTGCTCTACTGTCTTGGGAG-G 584
| |||||||| |||||||||| ||||| || |||||||| ||||||||||| |||| |
Sbjct 492 CA-TCACCAAGATTTTCAGGTCACGAGATTATGACTCTGTGGTCTACTGTCTT-GGAGAG 549
Query 585 CTGTTTGAAAAAGTTGAAGTGTTTAAGCCGCCGGCTAGTCGTTCAGCATCTGCAGAAACA 644
||||||||||| |||||||||||||| ||| ||||||||||||| ||||||||||||||
Sbjct 550 CTGTTTGAAAATGTTGAAGTGTTTAAACCGATGGCTAGTCGTTCAACATCTGCAGAAACA 609
Query 645 TATCTTGTGGGTTTGAAATACTTAGCCCCTGCCAAGATTGATCCCCGTCTTCTTGATTAT 704
|||||| |||||||||| ||| ||| |||| ||||||| ||||| |||||||||||||
Sbjct 610 TATCTTTTGGGTTTGAATTACAAAGCTCCTGACAAGATTAATCCCAATCTTCTTGATTAT 669
Query 705 AGACATCTCTTTAAGG-AGTCAGCAGAACCCACGAGAAAGGTGGTGGATGTGCTTGGAGG 763
||||| || ||||||| || ||||||||| || | ||||||| |||||||||||||||
Sbjct 670 AGACAACTATTTAAGGTGGT-AGCAGAACCTACAAAAAAGGTGAAGGATGTGCTTGGAGG 728
Query 764 ATCAAAACAAAAGAGAAACCGTGATGGGTATGAAGATGGGGAGTCCATTTTGAGAAGAGT 823
||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 729 ATCAAAACAGAAGAGAAACCGTGATGGGTATGAAGATGGAGAGTCCATTTTGAGAAAAGT 788
Query 824 TGCATCTGCTGCTGATTTCATTTGGTCTGAAAATCCTCTTGACG-TTCTTGGCACGACT- 881
|||||||||||||||||||||||||||||||||||||||||| | |||||||||| | |
Sbjct 789 TGCATCTGCTGCTGATTTCATTTGGTCTGAAAATCCTCTTGA-GATTCTTGGCAC-AGTT 846
Query 882 ACTTCCATATCATTTGATGATCAAGCCTCTCTACCTTTAAAGGAACATGATTTGACGACA 941
|||| ||||| |||||||||||||| |||||||||||||||||||| ||||||| |||
Sbjct 847 ACTTGTATATCTTTTGATGATCAAGCTTCTCTACCTTTAAAGGAACACAATTTGACTACA 906
Query 942 GAGGAGATTAAAATTCTATGCGATGATCTTCCTGTCTTGGGGAAGAATGACTTCAAGCAT 1001
|||||| |||||| |||||||| ||||||||||| ||||||||||||||||| ||||||
Sbjct 907 GAGGAGGTTAAAACACTATGCGACGATCTTCCTGTTTTGGGGAAGAATGACTTTAAGCAT 966
Query 1002 ATCCTAAAATGGCGAATGCAAATCAGGAAAGCTCTGACTCCTGAGAAAAAGGAAGTTGCT 1061
|||||||||||| ||||||||||||||||||||||| ||||||| |||||||||| ||
Sbjct 967 ATCCTAAAATGGAGAATGCAAATCAGGAAAGCTCTGTCTCCTGAAAAAAAGGAAGGAACT 1026
Query 1062 AAACCTGAGCCTGATGTGGGAAAGGAAGATGAGGAAAATGAAGATGATAAACTACTCAAT 1121
||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1027 AAAAAGGAGCTTGATGTGGGAAAGGAAGATGAGGAAAATGAGGATGATAAACTACTCAAT 1086
Query 1122 GAATTGGAAGAGCTGACAAACACAGTTGACCGCAAGAAGAAACAGGCAAAGAAGATTCTT 1181
||||||||||||||||||||||||| ||||||||||| |||| |||||||||| |||||
Sbjct 1087 GAATTGGAAGAGCTGACAAACACAGCGGACCGCAAGAATAAACGGGCAAAGAAGCTTCTT 1146
Query 1182 GCAAAACGAAGGGCTAAGGACAAGGCGCGGAAGGCGACTGGTCCACAGAT-GGATGTACT 1240
|| |||||| |||||||||| | | |||||||||| | |||||||||||| || || |||
Sbjct 1147 GCTAAACGACGGGCTAAGGATATGACGCGGAAGGCAATTGGTCCACAGATAGG-TGCACT 1205
Query 1241 TGAAGATGGTT-TCGTCGACAATGAATTGTTCTCTCTTAATGCTATCAAGGGAAAGAAAG 1299
||||||||||| | || ||| |||||||||| |||||| || ||| |||||||||||||
Sbjct 1206 TGAAGATGGTTAT-GTAGACCATGAATTGTTTTCTCTTTCTGTTATGAAGGGAAAGAAAG 1264
Query 1300 ATCTAATGGCAGTTGACAATGATGAAGATGATAATGGCAATG-C--CGT---TGACAGTG 1353
| |||||| ||||||||||||||||||||||||||| ||||| | ||| ||||||||
Sbjct 1265 ACCTAATGACAGTTGACAATGATGAAGATGATAATGACAATGGCAACGTCGATGACAGTG 1324
Query 1354 AGAACGAAGACCATGGCGAAGGAGCTTCAGATGACTCCAAAGACAGTGACAGAGATTCTG 1413
|||||||||| || || | |||||||||| ||||||||||||| || ||||||||
Sbjct 1325 AGAACGAAGA----GG-GA-G---CTTCAGATGATTCCAAAGACAGTGTCATAGATTCTG 1375
Query 1414 ATGAAGAACGTCAGAA-ATACACTGAACAAATGGAAGAGATTTTTGA-GCAGGCATATGA 1471
||||||||||||| || ||||| |||||||||||||||||||||||| | ||||||||||
Sbjct 1376 ATGAAGAACGTCA-AAGATACAATGAACAAATGGAAGAGATTTTTGATG-AGGCATATGA 1433
Query 1472 GCGGTATATGGTGAAGAAAGAAGGAAGCGCAAAGCAAAGGAAGCGGGCTAGGCAGGCCCA 1531
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 1434 GCGGTATATGGTGAAGAAAGAAGGAAGCGCAAAGCAAAGGAAGCGGGCTAGGCATGCACA 1493
Query 1532 TGCTGAAAAGCTGGAGGAAGGTGATGGAGATGAAGAAATGAAGA-TCGATTACGATTCAG 1590
||||| ||||||||||| ||||||||||||| || |||||| | ||||||| ||||| |
Sbjct 1494 CGCTGAGAAGCTGGAGGATGGTGATGGAGATGTAGCAATGAA-ACTCGATTATGATTCGG 1552
Query 1591 ATATGAATGAAGAAAAGGATGAGGCAAACCCTCTTGTTGTACCACTTGATGATGGAGTGG 1650
||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 1553 ATATGAATGAAGAGAATGATGAGGCAAACCCTCTTGTGGTACCACTTGATGATGGAGAGG 1612
Query 1651 TCCAAACAAAGGAGGAAATATCCAACCAGTGGTTCAGTCAGAATATATTTGCAGAAGCCG 1710
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 1613 TCCAAACAAAGGAGGAAATATCCAACCAGTGGTTCAGTCGGGATATATTTGCAGAAGCCA 1672
Query 1711 TGGAAGAAGGAGACTTGGGAAAAGATGA-CA--GTGAAGACGAAATAG-CAAATAAGAAA 1766
||||| |||||||||||||||||||| || ||||||||||||| | ||| |||||||
Sbjct 1673 CCGAAGACGGAGACTTGGGAAAAGATGATCACAGTGAAGACGAAAT-GTCAACTAAGAAA 1731
Query 1767 AAGAGCAAAAATCTGTCTAAACCAGACAAGTCAAAGCAGAAGGCTTCAAAAGCAAGTGTG 1826
||||||||||||| |||||||| ||||||||||||||||||| || || ||||
Sbjct 1732 CAGAGCAAAAATCTTTCTAAACCTTACAAGTCAAAGCAGAAGGC---AA--GC--GTGT- 1783
Query 1827 TTGTCTGATCAGAGCTTGCCCAATAGCTCCAAGAAGGAAGATGAGTTT-GAGGTAGTCCC 1885
| || ||| |||||||| ||||| ||||| || |||||||| || ||| || |||||||
Sbjct 1784 T-GTTTGACCAGAGCTTTCCCAACAGCTCTAACAAGGAAGACGA-TTTCGATATAGTCCC 1841
Query 1886 TGCACCAGCCACAGATTCTGACTCAGATTCATCCTCTGAAGATGATGTTCATACCAAGGC 1945
||| |||||| | |||||||||||| ||||||||||| |||||||||||| | |||||
Sbjct 1842 TGCCCCAGCCTTGGGTTCTGACTCAGACTCATCCTCTGATGATGATGTTCATGCGAAGGC 1901
Query 1946 CGAGATACTGGCATGTGCCaaaaaaaTGCTGAGGAAGAAGCAGAGAGAACAGATGCTTGA 2005
||||||| |||| |||||||| |||||||| |||||||||||||||||| ||||||||||
Sbjct 1902 CGAGATATTGGCCTGTGCCAAGAAAATGCTAAGGAAGAAGCAGAGAGAAGAGATGCTTGA 1961
Query 2006 TG---ATGCATATAACAAACACATGTTTGTAG-ATGAAGGTTTACCAAAATGGTTTGTGG 2061
|| |||| ||||||||| | ||||||| || | ||||||||||| || |||||| |||
Sbjct 1962 TGGTGATGCTTATAACAAATATATGTTTG-AGGACGAAGGTTTACCCAAGTGGTTTTTGG 2020
Query 2062 ATGACGAGAAGCAGCACAGACAACCAATGAAACCTGTTACGAAAGATGAAGTTAATGCAA 2121
||||||| |||||||||||||| || |||||||| || || ||||| |||||||||||||
Sbjct 2021 ATGACGAAAAGCAGCACAGACAGCCGATGAAACCCGTGACAAAAGAAGAAGTTAATGCAA 2080
Query 2122 TGAAAGCACAGTTCAAAGAGATCAATGCTCGTCCAGCCAAGAAGGTGGCAGAGGCCAAGG 2181
||||||| ||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||
Sbjct 2081 TGAAAGCTCAGTTCAAAGAAATCAACGCTCGTCCAGCCAAGAAAGTGGCTGAGGCCAAGG 2140
Query 2182 CACGGAAGAAGCGAGCTGCCCA-GAAAAGATTGGAGAAAGTGAGGAAGAAGGCAAACACA 2240
||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 2141 CACGGAAGAAGCGAGCTGCT-ATGAAAAGATTGGAGAAAGTGAGGAAGAAGGCAAACACA 2199
Query 2241 ATATCTGACACAGCAGATATATCAGACCGTTCAAAGGACAAGATGATAGACAAGCTATAC 2300
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 2200 ATATCTGACACAGCAGATATCTCAGACCGTTCAAAGGACAAGATGATAGATAAGCTATAC 2259
Query 2301 AAGAAAGCAGCAGAGCCAAGAAAGCC-AAGGAAAGAACTGGTTGTGTCTAAGAAAGGAGT 2359
|||||||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||
Sbjct 2260 AAGAAAGCAGCAGAGCCAAGGAAGCCTAAG-AAAGAACTGGTTGTGTCTAAGAAAGGAGT 2318
Query 2360 TGGGGTTAAAGTTGGTAAGGGACAGAAGAGAGTGGATAGGAGGATGAAGAGTGATGATAG 2419
||||||||| ||||| || || |||||||||||||||||||||||||||||||||| |||
Sbjct 2319 TGGGGTTAAGGTTGGGAAAGGTCAGAAGAGAGTGGATAGGAGGATGAAGAGTGATGCTAG 2378
Query 2420 GAAACGTGGGGGAGGAAAGCCCGGTAGGAACGGGCAGAAG-G-GC-----ACTGGTAAAG 2472
||| || || ||||| |||||| ||||||||||| | ||| | || |||||||||
Sbjct 2379 GAAGCGCGGAGGAGGCAAGCCCAGTAGGAACGGGAAAAAGAGTGCCTGCCACTGGTAAAA 2438
Query 2473 -CAGGCCAGAAAGGAAA 2488
||||||||||||||||
Sbjct 2439 TCAGGCCAGAAAGGAAA 2455
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 103948278605
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5