BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G25970.1 Length=2330 Score E Sequences producing significant alignments: (Bits) Value Ahg492220 jgi|Araly1|492220|fgenesh2_kg.7__1653__AT4G25970.1 3779 0.0 Ahg917424 jgi|Araly1|917424|Al_scaffold_0008_2175 1589 0.0 Ahg359372 jgi|Araly1|359372|fgenesh1_pg.C_scaffold_161000001 942 0.0 > Ahg492220 jgi|Araly1|492220|fgenesh2_kg.7__1653__AT4G25970.1 Length=2345 Score = 3779 bits (2046), Expect = 0.0 Identities = 2255/2352 (96%), Gaps = 29/2352 (1%) Strand=Plus/Plus Query 1 TCGGTGACACAGATATTTTGCTTCCAAATA-AAACGAGTCCGGTCACTGGCGCTCACTGA 59 |||||||||||| ||||||| |||||| ||| || ||||||||||| |||||||||| Sbjct 1 TCGGTGACACAGGTATTTTG----CAAATAGAAA-GACTCCGGTCACTGCCGCTCACTGA 55 Query 60 CTTCGTCTTCCTCCATCTCCG-A--TCC-AT----TGGTTTAACAAGCGCGTGAGGGCCA 111 |||| |||||||||||||||| | ||| || || ||| ||||||||||||| | | Sbjct 56 CTTCTTCTTCCTCCATCTCCGAATTTCCGATCCACAGGATTACCAAGCGCGTGAGGTCTA 115 Query 112 GATAGACCGAGAATCATGGGAAACGGAAACTCAACGGAGACGAAAGAGTCGCGCCGATCA 171 || || |||||| |||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 116 GAGAGTTCGAGAACCATGGGAAACGGAAACTCCACGGAGGCGAAAGAGTCGCGCCGATCA 175 Query 172 AAGATGCGTA-AGAAGATTCAAAACTTTCGCAGCCGCCGCCGTCTTAGTCGTCCAGGATC 230 |||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 176 AAGATGCG-ACAGAAGATTCAGAACTTTCGCAGCCGCCGCCGTCTTAGTCGTCCAGGATC 234 Query 231 CGGAAGCGTCTCTGGATTGGCTAGTCAGAGATCTGTGAGCGCAGATGATTTCGCCGGCAT 290 |||||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct 235 CGGAAGCGTCTCCGGATTGGTTAGTCAGAGATCTGTTAGCGCAGATGATTTCGCCGGCAT 294 Query 291 TGCTCTTCTCACTCTTATCGGCGCGGAGATGAAGTTCAAGGACAAGTGGCTCGCCTGTGT 350 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 295 TGCTCTTCTCACTCTCATCGGCGCGGAGATGAAGTTCAAGGACAAGTGGCTCGCCTGTGT 354 Query 351 TTCCTTCGGGGAACAAACTTTCCGTTCGGAAATTTCAGATTCCACAGAGAAGCCGATTTG 410 |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct 355 TTCCTTCGGGGAACAAACTTTCCGTTCGCAGATTTCAGATTCCACAGAGAAGCCGATTTG 414 Query 411 GAACTCGGAAAAGAAGCTTCTCCTGGAGAAAAATGGACCAAGTCTGGCTAGAATCTCTGT 470 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 415 GAATTCGGAAAAGAAGCTTCTCCTGGAGAAAAATGGACCAAGTCTGGCTAGAATCTCTGT 474 Query 471 ATTTGAGACCAATAGACTCTTGAAGAACAATATCGTTGGTTATTGTGAGCTTGATCTACT 530 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 475 ATTTGAGACCAATAGACTCTCGAAGAACAATATCGTTGGTTATTGTGAGCTTGATCTACT 534 Query 531 TGATTTCGTAGTACAGGAACCTGACTCTACTTGCAAGTCATTTGACCTGTTAGACCCGGC 590 ||| |||||||| ||||||||||||||| ||||||| |||||||||||||||||||| || Sbjct 535 TGAATTCGTAGTGCAGGAACCTGACTCTGCTTGCAAATCATTTGACCTGTTAGACCCTGC 594 Query 591 CTCATCTAACGTTGTTGGCAGCATGTTTGTTTCATGCTCCGTTGAGGATCCTGTTGAAAC 650 ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 595 CTCATCTAATGTTGTTGGCAGCATGTTTGTCTCATGCTCCGTTGAGGATCCTGTTGAAAC 654 Query 651 CGAGACATGTTTCGCGAAGCGTATTTTGTCCATAGTGGATTATGACGAAGATGGAAAACT 710 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 655 CGAGACATGTTTCGCAAAGCGTATTTTGTCCATAGTGGACTATGACGAAGATGGAAAACT 714 Query 711 CTCATTCTCAGAGTTCTCTGATCTGATGAATGCTTTTGGGAATGTAGTGGCTGCTAACAA 770 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 715 CTCATTCTCAGAGTTCTCTGATCTGGTGAATGCTTTTGGGAATATAGTGGCTGCTAACAA 774 Query 771 GAAAGAGGAGTTGTTCAAAGCCGCTGACCTGAATGGGGATGGTGTTGTTACAATTGATGA 830 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 775 GAAAGAGGAGTTGTTCAAAGCCGCTGACCTGAATGGGGATGGTGTTGTTACAATTGATGA 834 Query 831 GTTGGCTGCACTTCTTGCCGTTCAACAGGAACAGGAGCCAATTATAAATAGTTGTCCGGT 890 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 835 GTTGGCTGCACTTCTTGCCGTTCAACAGGAACAGGAGCCAATTATAAATAGTTGTCCGGT 894 Query 891 TTGCGGTGAGGCTCTTCAACTTGACAAGCTCAATGCAATGATCCATATGACTCTCTGTTT 950 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 895 TTGCGGTGAGGCTCTTCAACTTGACAAGCTCAATGCAATGATCCATATGACTCTCTGTTT 954 Query 951 TGACGAAGGAACTGGTAATCAAA---TGACCGGAGGGTTCTTGACTGATAGGCAGGCTTC 1007 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 955 TGACGAAGGAACTGGTAATCAAACGATGACCGGAGGGTTCTTGACTGATAGGCAGGCTTC 1014 Query 1008 ATATGGATGGATGTTCAAACTAAGTGAATGGACTCATCTATCAACTTATGATGTTGGTTT 1067 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1015 ATATGGATGGATGTTCAAACTAAGTGAATGGACTCATCTATCAACTTATGATGTTGGTTT 1074 Query 1068 GAATACTGGTTCAAGTGCTTCACATATTGTGGTGATTGATAGGAAGACTAAGAGGCTCGT 1127 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1075 GAATACTGGTTCAAGTGCTTCACATATTGTGGTGATTGATCGGAAGACTAAGAGGCTCGT 1134 Query 1128 GGAAGAGTTGATTGATTCAAAGATTGTTATGTCTATGAGAGCTATTTACCAGTCAAAAAT 1187 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1135 GGAAGAGTTGATTGATTCAAAGATTGTTATGTCGATGAGAGCTATTTACCAGTCAAAAAT 1194 Query 1188 AGGACTCCGGCTTATGGACCAAGGAGCAAAAGAGATTTTGCAGAACCTTTCTGAGAAACA 1247 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1195 CGGACTCCGGCTTATGGACCAAGGAGCAAAAGAGATTTTGCAGAACCTTTCTGAGAAACA 1254 Query 1248 GGGGaaaaaaaTGAACTCAGTTGAATCTGCCCAAAATATTCCCAGCTTTCTCGAGTTTTT 1307 |||||| || |||||| |||||||||||||||||||||| |||||||||||||||||||| Sbjct 1255 GGGGAAGAAGATGAACACAGTTGAATCTGCCCAAAATATACCCAGCTTTCTCGAGTTTTT 1314 Query 1308 CAAGGATCAAATAAACATGGCCGAAGTCAAGTATCCTCTGGACCATTTTAAGACGTTCAA 1367 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1315 CAAGGATCAAATAAACATGGCCGAAGTCAAGTATCCTCTGGACCATTTTAAGACGTTCAA 1374 Query 1368 TGAATTCTTCGTACGGGAGTTAAAGCCTGGTGCAAGACCAATTGCGTGCATGGATCAGGA 1427 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1375 TGAATTCTTCGTACGGGAGTTAAAGCCTGGTGCAAGACCAATTGCGTGCATGGATCAGGA 1434 Query 1428 TGATGTTGCTGTATCTGCTGCTGATTGTCGATTAATGGCATTTCAATCGGTTGATGATAG 1487 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 1435 TGATGTTGCTGTATCTGCTGCTGATTGTCGATTAATGGCGTTTCAATCGGTGGATGATAG 1494 Query 1488 CACACGGTTCTGGATCAAGGGCCGTAAGTTTTCAATCAAAGGCCTCCTTGGAAATGATGT 1547 ||| |||||||||||||||||||||||||||||||||||||| |||||||| |||||||| Sbjct 1495 CACGCGGTTCTGGATCAAGGGCCGTAAGTTTTCAATCAAAGGTCTCCTTGGGAATGATGT 1554 Query 1548 GCAGTCGGATGCTTTCCTTGATGGATCTTTGGTGATATTCCGATTGGCGCCACAGGACTA 1607 |||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1555 GCAGTCAGATGCTTTTATTGATGGATCTTTGGTGATATTCCGATTGGCTCCACAGGACTA 1614 Query 1608 TCATCGTTTTCATTCTCCTGTCTCTGGTGTCATTGAAAAGTTTGTCAATGTTTCTGGAAG 1667 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1615 TCATCGTTTTCATTCTCCTGTCTCTGGTGTCATTGAAAAGTTTGTCAATGTTTCTGGAAG 1674 Query 1668 CTTATATACGGTTAATCCGATTGCTGTCAATAGCAAGTACTGTAATGTGTTCACTGAGAA 1727 ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1675 CTTATATACAGTTAATCCGATAGCTGTCAATAGCAAGTACTGTAATGTGTTCACTGAGAA 1734 Query 1728 TAAACGGACCATCGTAATTATATCAACAGCAGAGTTTGGAAAGGTCGCATTTGTTGCGAT 1787 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1735 TAAACGGACAATCGTAATTATATCAACAGCAGAGTTTGGAAAGGTCGCATTTGTTGCGAT 1794 Query 1788 TGGAGCAACAATGGTTGGTAGTATCAGCTTTGTTAGGCAAGAGGGAGACCATGTGAAGAA 1847 |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1795 TGGAGCGACAATGGTTGGTAGTATCACCTTTGTTAGGCAAGAGGGAGACCATGTGAAGAA 1854 Query 1848 AGGGGACGAGCTTGGTTACTTTTCATTTGGTGGAAGCACAGTTATATGCGTCTTTGAAAA 1907 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 1855 AGGGGACGAGCTTGGTTACTTTTCATTTGGTGGAAGCACAGTTATAAGCGTCTTTGAAAA 1914 Query 1908 GGACTCGATTAAGATTGATGAGGATCTCTTAGCTAACAGTGCTAGGTCCTTGGAGACATT 1967 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1915 GGACTCGATTAAGATTGATGAGGATCTCTTAGCTAACAGTGCTAGGTCCTTGGAGACATT 1974 Query 1968 AGTTACTGTTGGAATGCAACTTGGTGTCTCCTTTCCAAAGCTGGAAAACTGTGT-ACTTG 2026 ||||||||||||||||||||| |||||||||||||||||| | ||||||||||| | ||| Sbjct 1975 AGTTACTGTTGGAATGCAACTAGGTGTCTCCTTTCCAAAGATAGAAAACTGTGTTA-TTG 2033 Query 2027 AGCCCTGAACTGCTTCAAACTATGTGAGTTAGTACGAAACGACAGATGATTTTCTATGGT 2086 | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 2034 AACCCTGAACTGCTTCAAACTATGTGAGTTAGTACGAAACGACAGATGATTTTCTTTGGT 2093 Query 2087 TTGGTTTG-----ATTTGATTTAGTTTTCACTTTTCATCAAGAAAGAACTCAATTCCTCT 2141 |||||||| |||||||||||||||| ||||| |||||||||||||||||||||||| Sbjct 2094 TTGGTTTGGTTTGATTTGATTTAGTTTTCTCTTTTTATCAAGAAAGAACTCAATTCCTCT 2153 Query 2142 CTGTTTAATACACAATGACTTTGCTCTGTATATATAAACACCAGTA-T--GTCCCGGGCA 2198 |||||| ||||||||||||||||||||||||||||||||||||||| | |||| ||||| Sbjct 2154 CTGTTTGATACACAATGACTTTGCTCTGTATATATAAACACCAGTAATATGTCCTGGGCA 2213 Query 2199 GTGATACTTGTTAATGTTTACGGTATTTCGCtttttttGTTGAGTGTTTTTCCTAGGTGA 2258 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 2214 GTGATACTTGTTAATGTTTACGGTATTTCGCTTTTTTTGTTGAGTGTTTTTGCTAGGTGA 2273 Query 2259 CAATTTTACATGCAAATAAGGTTAAACACATGTCTGTCTCTATTCCGGTCTTAATGAAGA 2318 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 2274 CAATTTTACATGCAAATAAGGTTAAACACATGTCTGTCTCTATTCCTGTCTTAATGAAGA 2333 Query 2319 GACTTTGTCTGT 2330 |||||||||||| Sbjct 2334 GACTTTGTCTGT 2345 > Ahg917424 jgi|Araly1|917424|Al_scaffold_0008_2175 Length=1863 Score = 1589 bits (860), Expect = 0.0 Identities = 1334/1557 (86%), Gaps = 55/1557 (4%) Strand=Plus/Plus Query 477 GACCAATAGACTCTTGAA-GAACAATATCGTTGGTTATTGTGAGCTTGATCTACTT-GAT 534 ||| ||||| ||| | || |||||| ||| | |||||||||||||||||| || || ||| Sbjct 294 GACAAATAGGCTC-TCAAGGAACAAAATCATCGGTTATTGTGAGCTTGATATA-TTCGAT 351 Query 535 TTCGTAGTACAGGAACCTGACTCTACTTGCAAGTCATTTGACCTGTTAGA-CCCGGCCTC 593 || | ||| ||||||||||| || | || |||||||||||| ||||||| ||| | || Sbjct 352 TTTGCAGTGCAGGAACCTGAGTCGGCGTGTAAGTCATTTGACTTGTTAGATCCC-ACATC 410 Query 594 ATCTAACGTTGTTGGCAGCATGTTT-GTTTCATGCTCCGTTGAGGATCCTGTTGAAACCG 652 ||| || |||||||||| ||| ||| |||| ||| | ||||||||||||||||||||| Sbjct 411 ATCCAATGTTGTTGGCACCAT-TTTCCTTTCTTGCGCTATTGAGGATCCTGTTGAAACCG 469 Query 653 AGA--CATGTTTCGCGAAGCGTATTTTGTCCATA---GT---GGATTATGACGAAGATGG 704 ||| | |||| || |||||||| ||||||||| || ||| || | |||||||| Sbjct 470 AGAGGC-GGTTT-GCAAAGCGTATCTTGTCCATAGTGGTGCAGGACTACAATGAAGATGG 527 Query 705 AAAACTCTCATTCTCAGAGTTCTCTGATCTGATGAATGCTTTTGGGAATGTAGTGGCTGC 764 | |||| || || || |||||||||||||| || || |||||||| ||| |||||||||| Sbjct 528 ACAACTGTCGTTTTCGGAGTTCTCTGATCTAATAAAGGCTTTTGGAAATTTAGTGGCTGC 587 Query 765 TAACAAGAAAGAGGAGTTGTTCAAAGCCGCTGACCTGAATGGGGATGGTGTTGTTACAAT 824 |||||||||||| |||||||||||||| ||||||||||||||||| |||||||| || || Sbjct 588 TAACAAGAAAGAAGAGTTGTTCAAAGCTGCTGACCTGAATGGGGACGGTGTTGTGACGAT 647 Query 825 TGATGAGTTGGCTGCACTTCTTGC-CGTTCAACAGGAACAGGAGCCAATTATAAATAGTT 883 ||| |||||||||| |||||||| | ||||||| |||||||||||||| ||||||| || Sbjct 648 TGACGAGTTGGCTGTGCTTCTTGCTC-TTCAACAAGAACAGGAGCCAATAATAAATAATT 706 Query 884 GTCCGGTTTGCGGTGAGGCTCTTCA--ACT-TGACAAGCTCAATGCAATGATCCATATGA 940 ||||||| || |||||||||||||| || |||||||||||| || ||||| ||||||| Sbjct 707 GTCCGGTGTGTGGTGAGGCTCTTCAGCTCTCTGACAAGCTCAACGCGATGATTCATATGA 766 Query 941 CTCTCTGTTTTGACGAAGGAACTGGTAATCAA---ATGACCGGAGGGTTCTTGACTGATA 997 |||| ||||||||||||||||| ||||||||| |||||||||||||| |||||||||| Sbjct 767 CTCTTTGTTTTGACGAAGGAACGGGTAATCAAGTGATGACCGGAGGGTTTTTGACTGATA 826 Query 998 GGCAGGCTTCATATGGATGGATGTTCAAACTAAGTGAATGGACTCATCT-ATCAACTTAT 1056 | || ||||| |||||||||||||||||||||||||||||||| || || |||||||||| Sbjct 827 GACAAGCTTCTTATGGATGGATGTTCAAACTAAGTGAATGGACACA-CTTATCAACTTAT 885 Query 1057 GATGTTGGTTTGAATACTGGTTCAAGTGCTTCACATATTGTGGTGATTGATAGGAAGACT 1116 || |||||||||||||||||||||||||| ||| |||||||||| ||||| |||||| | Sbjct 886 GACGTTGGTTTGAATACTGGTTCAAGTGCCTCATATATTGTGGTAATTGACCGGAAGAGT 945 Query 1117 AAGAGGCTCGTGGAAGAGTTGATTGATTCAAAGATTGTTATGTCTATGAGAGCTATTTAC 1176 ||||| ||||||||||||||||| || |||||||||||| | || |||||||||||||| Sbjct 946 AAGAGACTCGTGGAAGAGTTGATAGACTCAAAGATTGTTCTCTCCATGAGAGCTATTTAT 1005 Query 1177 CAGTCAAAAATAGGACTCCGGCTTATGGACCAAGGAGCAAAAGAGATTTTGCAGA-ACCT 1235 ||||||||||| ||||| || |||||||| ||||| ||||| |||||| |||||| || | Sbjct 1006 CAGTCAAAAATTGGACTTCGACTTATGGATCAAGGGGCAAAGGAGATTCTGCAGAGAC-T 1064 Query 1236 TTCTGAGAAACAGGGGaaaaaaaTGAACTCAGTTGAATCTGCCCAAAATATTCC-CAGCT 1294 ||||||||| |||||||| ||||||| ||| |||||||| || ||||| || || | ||| Sbjct 1065 TTCTGAGAAGCAGGGGAAGAAAATGAGCTCTGTTGAATCCGCACAAAAAATACCAC-GCT 1123 Query 1295 TTCTCGAGTT-TTTCAAGGATCAAATAAACATGGCCGAAGTCAAGTATCCTCTGGACCAT 1353 |||||||||| ||| |||||||||||||||||||| |||||||||||||||||| | ||| Sbjct 1124 TTCTCGAGTTCTTT-AAGGATCAAATAAACATGGCTGAAGTCAAGTATCCTCTGCAGCAT 1182 Query 1354 TTTAAGACGTTCAATGAATTCTTCGTACGGGAGTT-AAAGCCTGGTGCAAGACCAATTGC 1412 ||||||||||||||||| |||||| | |||||||| ||| |||||||||||||||||||| Sbjct 1183 TTTAAGACGTTCAATGAGTTCTTCATCCGGGAGTTGAAA-CCTGGTGCAAGACCAATTGC 1241 Query 1413 GTGCATGGATCAGG--ATGATGTTGCTGTATCTGCTGCTGATTGTCGATTAATGGCATTT 1470 |||||| | ||| |||||||||| |||| |||||||||||||||||||||||||||| Sbjct 1242 TTGCATGAA--AGGCGATGATGTTGCCGTATGTGCTGCTGATTGTCGATTAATGGCATTT 1299 Query 1471 CAATCGGTTGATGATAGCACACGGTTCTGGATCAAGGGCCGTAAGTTTTCAATCAA-AGG 1529 || ||||| || ||||| || || ||||||||||||||| ||||||||||| || ||| Sbjct 1300 CAGTCGGTGGAGGATAGTACCCGTTTCTGGATCAAGGGCAAAAAGTTTTCAAT-AAGAGG 1358 Query 1530 CCTCCTTGG-AA-A-TGA-TGTGCAGT-CGGATGCTTTCCTTGATGGATCTTTGGTGATA 1584 ||| ||||| || | | | |||| | | | |||| |||||||||||||||||||||||| Sbjct 1359 CCTTCTTGGGAAGAGT-ACTGTGAA-TACAAATGCCTTCCTTGATGGATCTTTGGTGATA 1416 Query 1585 TTCCGATTGGCGCCACAGGACTATCATCGTTTTCAT-TCTCCTGTCTCTGGTGTCATTGA 1643 |||||| | || |||||||| |||||||| |||||| || ||||||||||| |||||||| Sbjct 1417 TTCCGACTAGCACCACAGGATTATCATCGGTTTCATGTC-CCTGTCTCTGGAGTCATTGA 1475 Query 1644 AAAGTTTGTCAATGTTTCTGGAAGCTTATATACGGTTAATCCGATTGCTGTCAATAGCAA 1703 ||||||||| || ||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 1476 AAAGTTTGTGGATCTTTCTGGAAGCTTATATACAGTTAATCCGATTGCGGTCAATAGCAA 1535 Query 1704 GTACTGTAATGTGTTCACTGAGAATAAACGGACCATCGTAATTATATCAACAGCAGAGTT 1763 |||||||||||| ||||| || |||||||| ||| | | |||||||||||||||||| || Sbjct 1536 GTACTGTAATGTATTCACGGAAAATAAACGAACCGTTGCAATTATATCAACAGCAGAATT 1595 Query 1764 TGGAAAGGTCGCATTTGTTGCGATTGGAGCAACAATGGTTGGTAGTATCAGCTTTGTTAG 1823 ||||||||| || |||||||| || || || |||||||||||||| || | |||| || Sbjct 1596 TGGAAAGGTTGCTTTTGTTGCAATCGGTGCGACAATGGTTGGTAGCATAAATTTTGAGAG 1655 Query 1824 GCAAG-AGGGAGACCATGTGAAGAAAGGGGACGAGCTTGGTTACTTTTCATTTGGTGGAA 1882 ||| | ||||| ||||||||||||||||| || |||||||| |||||||||||||||| Sbjct 1656 A-AAGGAAGGAGAACATGTGAAGAAAGGGGATGAACTTGGTTATTTTTCATTTGGTGGAA 1714 Query 1883 GCACAGTTATATGCGTCTTTGAAAAGGACTCGATTAAGATTGATGAGGATCTCTTAGCTA 1942 ||||||||||||| |||||||||||||||||||| ||| |||||||||||||| | || Sbjct 1715 GCACAGTTATATGTGTCTTTGAAAAGGACTCGATCCGGATCGATGAGGATCTCTTGGTTA 1774 Query 1943 ACAGTGCTAGGTCCTTGGAGACATTAGTTACTGTTGGAATGCAACTT-GGTGTCTCC 1998 |||||| ||||||||| ||||||||||| | ||||||||||||| || ||||||||| Sbjct 1775 ACAGTGGTAGGTCCTTAGAGACATTAGTGAGTGTTGGAATGCAA-TTAGGTGTCTCC 1830 > Ahg359372 jgi|Araly1|359372|fgenesh1_pg.C_scaffold_161000001 Length=1503 Score = 942 bits (510), Expect = 0.0 Identities = 793/926 (86%), Gaps = 34/926 (4%) Strand=Plus/Plus Query 1096 GTGGTGATTGATAGGAAGACTAAGAGGCTCGTGGAAGAGTTGATTGATTCAAAGATTGTT 1155 ||||| ||||| |||||| |||||| ||||||||||||||||| || |||||||||||| Sbjct 556 GTGGTAATTGACCGGAAGAGTAAGAGACTCGTGGAAGAGTTGATAGACTCAAAGATTGTT 615 Query 1156 ATGTCTATGAGAGCTATTTACCAGTCAAAAATAGGACTCCGGCTTATGGACCAAGGAGCA 1215 | || |||||||||||||| ||||||||||| ||||| || |||||||| ||||| ||| Sbjct 616 CTCTCCATGAGAGCTATTTATCAGTCAAAAATTGGACTTCGACTTATGGATCAAGGGGCA 675 Query 1216 AAAGAGATTTTGCAGA-ACCTTTCTGAGAAACAGGGGaaaaaaaTGAACTCAGTTGAATC 1274 || |||||| |||||| | ||||||||||| |||||||| ||||||| ||| |||||||| Sbjct 676 AAGGAGATTCTGCAGAGA-CTTTCTGAGAAGCAGGGGAAGAAAATGAGCTCTGTTGAATC 734 Query 1275 TGCCCAAAATATTCCCA-GCTTTCTCGAGTT-TTT----C----AAGGATCAAATAAACA 1324 || ||||| | | ||| ||||||||||||| ||| | || ||||||||||||| Sbjct 735 CGCACAAAA-AATACCACGCTTTCTCGAGTTCTTTAAGGCATGGAAAGATCAAATAAACA 793 Query 1325 TGGCCGAAGTCAAGTATCCTCTGGACCATTTTAAGACGTTCAATGAATTCTTCGTACGGG 1384 |||| |||||||||||||||||| | |||||||||||||||||||| |||||| | |||| Sbjct 794 TGGCTGAAGTCAAGTATCCTCTGCAGCATTTTAAGACGTTCAATGAGTTCTTCATCCGGG 853 Query 1385 AGTT-AAAGCCTGGTGCAAGACCAATTGCGTGCATGGATCA-G-GATGATGTTGCTGTAT 1441 |||| ||| |||||||||||||||||||| ||||| || | | ||||||||||| |||| Sbjct 854 AGTTGAAA-CCTGGTGCAAGACCAATTGCTTGCAT-GA-AAGGCGATGATGTTGCCGTAT 910 Query 1442 CTGCTGCTGATTGTCGATTAATGGCATTTCAATCGGTTGATGATAGCACACGGTTCTGGA 1501 |||||||||||||||||||||||||||||| ||||| || ||||| || || ||||||| Sbjct 911 GTGCTGCTGATTGTCGATTAATGGCATTTCAGTCGGTGGAGGATAGTACCCGTTTCTGGA 970 Query 1502 TCAAGGGCCGTAAGTTTTCAATCAA-AGGCCTCCTT-GGAA-ATG-A-TGTGCAGT-CGG 1555 |||||||| ||||||||||| || |||||| ||| |||| | | | |||| | | | Sbjct 971 TCAAGGGCAAAAAGTTTTCAAT-AAGAGGCCTTCTTGGGAAGA-GTACTGTG-AATACAA 1027 Query 1556 ATGCTTTCCTTGATGGATCTTTGGTGATATTCCGATTGGCGCCACAGGACTATCATCGTT 1615 |||| |||||||||||||||||||||||||||||| | || |||||||| |||||||| | Sbjct 1028 ATGCCTTCCTTGATGGATCTTTGGTGATATTCCGACTAGCACCACAGGATTATCATCGGT 1087 Query 1616 TTCAT-TCTCCTGTCTCTGGTGTCATTGAAAAGTTTGTCAATGTTTCTGGAAGCTTATAT 1674 ||||| || ||||||||||| ||||||||||||||||| || ||||||||||||||||| Sbjct 1088 TTCATGTC-CCTGTCTCTGGAGTCATTGAAAAGTTTGTGGATCTTTCTGGAAGCTTATAT 1146 Query 1675 ACGGTTAATCCGATTGCTGTCAATAGCAAGTACTGTAATGTGTTCACTGAGAATAAACGG 1734 || |||||||||||||| ||||||||||||||||||||||| ||||| || |||||||| Sbjct 1147 ACAGTTAATCCGATTGCGGTCAATAGCAAGTACTGTAATGTATTCACGGAAAATAAACGA 1206 Query 1735 ACCATCGTAATTATATCAACAGCAGAGTTTGGAAAGGTCGCATTTGTTGCGATTGGAGCA 1794 ||| | | |||||||||||||||||| ||||||||||| || |||||||| || || || Sbjct 1207 ACCGTTGCAATTATATCAACAGCAGAATTTGGAAAGGTTGCTTTTGTTGCAATCGGTGCG 1266 Query 1795 ACAATGGTTGGTAGTATCAGCTTTGTTAGGCAAG-AGGGAGACCATGTGAAGAAAGGGGA 1853 |||||||||||||| || | |||| || ||| | ||||| ||||||||||||||||| Sbjct 1267 ACAATGGTTGGTAGCATAAATTTTGAGAGA-AAGGAAGGAGAACATGTGAAGAAAGGGGA 1325 Query 1854 CGAGCTTGGTTACTTTTCATTTGGTGGAAGCACAGTTATATGCGTCTTTGAAAAGGACTC 1913 || |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1326 TGAACTTGGTTATTTTTCATTTGGTGGAAGCACAGTTATATGTGTCTTTGAAAAGGACTC 1385 Query 1914 GATTAAGATTGATGAGGATCTCTTAGCTAACAGTGCTAGGTCCTTGGAGACATTAGTTAC 1973 ||| ||| |||||||||||||| | |||||||| ||||||||| ||||||||||| | Sbjct 1386 GATCCGGATCGATGAGGATCTCTTGGTTAACAGTGGTAGGTCCTTAGAGACATTAGTGAG 1445 Query 1974 TGTTGGAATGCAACTT-GGTGTCTCC 1998 ||||||||||||| || ||||||||| Sbjct 1446 TGTTGGAATGCAA-TTAGGTGTCTCC 1470 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 87759924480 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5