BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G26690.1
Length=2809
Score E
Sequences producing significant alignments: (Bits) Value
Ahg492137 jgi|Araly1|492137|fgenesh2_kg.7__1570__AT4G26690.1 4108 0.0
Ahg475792 jgi|Araly1|475792|fgenesh2_kg.2__922__AT1G66970.1 1919 0.0
Ahg475793 jgi|Araly1|475793|fgenesh2_kg.2__923__AT1G66980.1 1886 0.0
> Ahg492137 jgi|Araly1|492137|fgenesh2_kg.7__1570__AT4G26690.1
Length=2672
Score = 4108 bits (2224), Expect = 0.0
Identities = 2553/2707 (94%), Gaps = 42/2707 (2%)
Strand=Plus/Plus
Query 58 ctctttctctctccacctctctttctctctTAAATTTCGTTCTGTCTCCGGCGAAGTCGC 117
|||| |||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct 4 CTCTCTCTCTCTCCACCTCTCTTTCTCTCTTAAATCTCGTTCTGTCTCCGGCGAAGACGC 63
Query 118 CGGCGGGAAGCTAAAAGGCAGGTTAGAACGAATTCCCGGCAGACAATCCAACAATGCGAG 177
|||| || | || || | | || ||| ||||| |||||||||
Sbjct 64 CGGC-GG--G----AA-GC----T---A--AA--------AGATAATCCGACAATGCGA- 97
Query 178 GGTTATTACGAGCTTCATCGCTTCTTCTCTGTGGTGTTATTCTGATTCAGCTGCTTGCTG 237
|| ||||||||||||||||||||| || ||||||||| |||||||||||||| ||||||
Sbjct 98 GG--ATTACGAGCTTCATCGCTTCTACTTTGTGGTGTTGTTCTGATTCAGCTGTTTGCTG 155
Query 238 CTCAAATCCATGCTCAAAGTAAAAAACCTAAAAGTCCATGGCCAACGCTCACTGGTGATC 297
|||||||| |||| | |||||||||||||||||||||||||||||||||||||||
Sbjct 156 CTCAAATCGATGC-C-----CAAAAACCTAAAAGTCCATGGCCAACGCTCACTGGTGATC 209
Query 298 CT-CCTCTTGTGATAGCTCGTGGTGGATTCTCTGGATTGTTCCCAGATTCGAGTTACGAT 356
|| ||| ||||||||||||| ||||| || ||||||||||| ||||||||||||||||||
Sbjct 210 CTCCCT-TTGTGATAGCTCGGGGTGGGTTTTCTGGATTGTTTCCAGATTCGAGTTACGAT 268
Query 357 GCTTACAATTTCGCAAT-TCTGACAAGTGTACCAGATGCTGTTCTATGGTGTGATGTTCA 415
||||||||||||||||| | ||||||||||| |||||| |||||||||||||||||||||
Sbjct 269 GCTTACAATTTCGCAATGT-TGACAAGTGTATCAGATGTTGTTCTATGGTGTGATGTTCA 327
Query 416 GCTAACCAAAGATGCTCTTGGTATTTGCTTCCCTGATTTAACAATGAGAAATTCTTCATC 475
|||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||
Sbjct 328 GCTAACCAAAGATGCTCTTGGTATTTGCTTCCCTGATTTAACTATGAGCAATGCTTCATC 387
Query 476 TATTGAAGCTGTTTACCCTACTCGACAAAAATCTTACCCGGTTAACGGAGTTCCTACTTC 535
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 388 TATTGAAGTTGTTTACCCTACTCGACAAAAATCTTACCCGGTTAACGGAGTTCCTACTTC 447
Query 536 CGGTTGGTTCACCATTGATTTCTCCTTGAAAGATCTCAAAGATGTTAACTTGATCCGAGG 595
||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||
Sbjct 448 CGGTTGGTTCACCATTGATTTCTCCTTGAAAGATCTCAAAGCTGTTAACCTGATACGAGG 507
Query 596 TATTTTATCTCGGTCAGAAAAGTTCGATGGTAATTCTAACCCGATTATGACGGTTCAAAG 655
||| ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 508 TATATTATCTCGGTCTGAAAAATTCGATGGTAATTCTAACCCGATTATGACGGTTCAAAG 567
Query 656 CGTATCCACGCAGATGAAACCATCATTCTTCTGGTTAAATGTTCAGCACGATGCGTTCTA 715
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 568 CGTAGCCACGCAGATGAAACCATCATTCTTCTGGTTGAATGTTCAGCACGATGCGTTTTA 627
Query 716 CGCGCAGCACAATTTGAGCATGAGCAGTTTTCTGGTTGCAGCTTCAAAAACTGTTCTCAT 775
|||||| || ||||||||||| ||||||||||||||||| |||||||||||||||| |||
Sbjct 628 CGCGCAACAGAATTTGAGCATTAGCAGTTTTCTGGTTGCCGCTTCAAAAACTGTTCCCAT 687
Query 776 TGACTTCATCTCTTCCCCTGAAGTGAACTTCTTTAAGAAAATTGCTGGTCGGTTCGGGCG 835
||||||||||||||||||||| ||||| ||||||| ||||||| ||||||| ||||||||
Sbjct 688 TGACTTCATCTCTTCCCCTGAGGTGAATTTCTTTAGGAAAATTTCTGGTCGTTTCGGGCG 747
Query 836 TAATGGACCAAGTCTTGTGTTCCGGTTTCTTGGTCAAGACGAGTTCGAGCCAACGACAAA 895
||||||||| |||||||||||||||||||| |||||||| |||||||||||||| |||||
Sbjct 748 TAATGGACCTAGTCTTGTGTTCCGGTTTCTCGGTCAAGAAGAGTTCGAGCCAACAACAAA 807
Query 896 CAGAACTTACGGCTCTATCTTGAGTAACTTGACTTTTGTCAAGACGTTTGCTTCAGGGAT 955
|||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct 808 CAGAACCTACGGCTCTATCTTGAGTAACCTGACTTTTGTCAAGACTTTTGCTTCAGGGAT 867
Query 956 TCTTGTCCCCAAGTCTTACATATTGCCACTTGATGACCAGCAGTACTTGCTTCCTCATAC 1015
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 868 CCTTGTTCCCAAGTCTTACATATTGCCACTCGATGACCAGCAGTACTTGCTTCCTCCTAC 927
Query 1016 ATCCTTGGTTCAAGATGCTCACAAAGCAGGATTAGAAGTTTTTGTGTCAGGTTTTGCAAA 1075
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 928 ATCCTTAGTTCAAGATGCTCACAAAGCAGGATTAGAAGTTTTTGTGTCAGGTTTTGCAAA 987
Query 1076 TGATATTGATATTGCACACGACTACAGTTTCGATCCAGTCTCTGAGTATCTATCTTTTGT 1135
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 988 TGATATTGATATTGCACATGACTACAGTTTCGATCCAGTCTCTGAGTATCTATCTTTTGT 1047
Query 1136 GGACAATGGCAACTTCTCTGTTGATGGTGTGCTCTCTGATTTTCCCATAACTGCATCTGC 1195
|||||||||||| |||||||| |||||||||||| |||||||||| ||| ||||||||||
Sbjct 1048 GGACAATGGCAATTTCTCTGTCGATGGTGTGCTCACTGATTTTCCTATATCTGCATCTGC 1107
Query 1196 ATCCCTTGATTGCTTCTCCCACGTTGGCAGAAACGCTACAAAACAAGTGGATTTTCTTGT 1255
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1108 ATCCCTCGATTGCTTCTCCCACATTGGCAGAAACGCTACAAAACAAGTGGATTTTCTTGT 1167
Query 1256 TATAACCAAAGATGGTGCGAGTGGAGACTATCCTGGATGTACAGACTTGGCATATAAGAA 1315
|||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1168 TATATCCAAAAATGGTGCGAGTGGAGACTATCCTGGATGTACAGACTTGGCATATGAGAA 1227
Query 1316 GGCAATCAAAGATGGTGCTGATGTAATCGATTGCTCGGTCCAATTGTCCAGCGATGGTAC 1375
||||||||||||||||||||||||||||||||||||||||||| |||||||||| || ||
Sbjct 1228 GGCAATCAAAGATGGTGCTGATGTAATCGATTGCTCGGTCCAAATGTCCAGCGACGGCAC 1287
Query 1376 ACCCTTTTGCTTAAGTTCGATCGATCTCGGGAACAGCACGACGGTCT-CCCTAACTGCTT 1434
|||| |||||||||||||||||||||||||||||||||| || || | ||||||||||||
Sbjct 1288 ACCCATTTGCTTAAGTTCGATCGATCTCGGGAACAGCACAACAGT-TGCCCTAACTGCTT 1346
Query 1435 TCAGAAACCGTTCAACAACTGTTCCTGAGTTGGGCTCACTTGGTGCAATATACACTTTCA 1494
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1347 TCAGAAACCGTTCAACAACTGTTCCTGAGTTGGGCTCACTTGGTGGAATATACACTTTCA 1406
Query 1495 GTCTCACATGGGCTGAGATCCAGACCTTGACTCCTGCTATTTCAAACCCCTACAGAGTAA 1554
||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 1407 GTCTCACATGGCCTGAGATCCAGACCTTGACTCCTGCTATTTCAAACCCCTACGGTGTAT 1466
Query 1555 CCAGCCTGTTTAGGAATCCAAAACAGAAAAATGCTGGGAAGCTTTTCTCACTTTCTGATT 1614
||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 1467 TCAGGCTGTTTAGGAATCCAAACCAGAAAAATGCTGGGAAGCTTTTTTCACTTTCTGATT 1526
Query 1615 TCCTAAGCTTGGCAAAAAACTCCACCTCTCTCTCCGGTGTTTTGATCAGTGTAGAGAATG 1674
| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1527 TTTTAAACTTGGCAAAGAACTCCACCTCTCTCTCCGGTGTTTTGATCAGTGTAGAGAATG 1586
Query 1675 CGGCATACCTGAGAGAGGAGCAAGGGCTCGACGTTGTCAAAGCGGTTCTTGATACACTCA 1734
||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1587 CGGCATACCTGAGAGAGAATCAAGGGCTCGACGTTGTTAAAGCGGTTCTTGATACACTCA 1646
Query 1735 CACAGACTGGCTACAGCAATAGTACAGCCACAAAGGTCATGATTCAGTCAACAAACAGCT 1794
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1647 CACAGACTGGCTACAGCAATAATACAGCCACAAAGGTCATGATTCAGTCAACAAACAGCT 1706
Query 1795 CGGTTCTAGTTGACTTCAAGAAGCAGAGCCAGTACGAGACTGTCTACAAAGTTGAAGAAA 1854
| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||
Sbjct 1707 CAGTTCTAGTTGACTTCAAGAAGCAGAGCAAGTACGAGACTGTCTATAAAGTTGAAGAAA 1766
Query 1855 ACATCCGTGATATTCTCGACTCTGCTATTGAAGACATAAAGAAATTCGCTGATGCTGTTG 1914
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1767 ACATCCGTGATATTCTCGACTCTGCTATTGAAGACATAAAGAAATTCGCTGATGCTGTTG 1826
Query 1915 TGATCCAAAAATTATCAGTCTTTCCTGTCGCTCAGTCGTTCATCACAACGCAAACCAATG 1974
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1827 TGATCCAAAAATCATCAGTCTTTCCTCTCGCTCAGTCGTTCATCACAACGCAAACCAATG 1886
Query 1975 TTGTGGAGAAGCTGCAGAAGTCTCAGCTCCCAGTTTATGTGGAACTGTTTCAGAATGAGT 2034
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1887 TTGTGGAGAAGCTGCAGAAGTCTCAGCTCCCAGTTTATGTGGAACTGTTTCAGAATGAGT 1946
Query 2035 TTTTATCTCAACCATATGACTTCTTTGCTGATGCAACCGTTGAGATAAACTCTTATATCA 2094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1947 TTTTATCTCAACCATATGACTTCTTTGCTGATGCAACCGTTGAGATAAACTCTTATATCA 2006
Query 2095 CTGGAGCCGGTATAAATGGAACCATCACCGAGTTCCCTTTTACAGCTGCAAGATACAAAA 2154
|||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 2007 CTGGAGCCGGTATAAACGGAACCATCACCGAGTTTCCTTTCACAGCTGCAAGATACAAAA 2066
Query 2155 GGAATCTATGTTTGGGCAGAAAAGAAACTATACCTTACATGGCCCCTGCCCAACCCGGTG 2214
||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2067 GGAATCTGTGTTTGGGAAGAAAAGAAACTATACCTTACATGGCCCCTGCCCAACCCGGTG 2126
Query 2215 CCCTCTTAACCCTTGTGAGTCCTAC-TGCCTTTCCTCCAGCCGAAGCTCCAAACCCGGTT 2273
||||||||||||||||||||||||| | |||| ||||||||| ||||||||| |||||||
Sbjct 2127 CCCTCTTAACCCTTGTGAGTCCTACGT-CCTTACCTCCAGCCCAAGCTCCAAGCCCGGTT 2185
Query 2274 TTCACAGATGCTGATGTCACTGAGCCACCACTACCTCCGGTTACCGCAAAAGCCCCAACC 2333
|||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2186 TTCATAGATGCTGATGTCACTGAGCCACCACTACCTCCGGTTATAGCAAAAGCCCCAACC 2245
Query 2334 TCATCCCCTGGAACCCCATCAACCAATGCACAAGCACCTAGTGGACAAACCCGAATCACT 2393
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2246 TCAACCCCTGGAACCCCATCAACCAATGCACAAGCACCTAGTGGACAAACCCGAATCACT 2305
Query 2394 CTATCTCTTCTACTTTCTGTTTTCGCAATGGTTCTTGCCTCTCTTCTACTTCTGTGATCA 2453
|||||| |||||||||| ||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 2306 CTATCTGTTCTACTTTCCGTTTTTGCAATGGTTCTTGCCTCCCTTCTACTTCTGTGATCA 2365
Query 2454 ACCCTTGATCTCATCTCCTCTGTTGATAATGTCTTCCACCCTCGTAAGATTTCCCTGTGT 2513
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 2366 ACCCTTGATCTCATCTCCTATGTTGATAATGTCTTCCGCCCTCGTAAGATTTCCCTGTGT 2425
Query 2514 GTGACTCAGTCAAATCTTAACAGCCAGAACCATAAAATTTTTCCGCTAGCGAGTCTTCGT 2573
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||
Sbjct 2426 GTGACTCAGTCAAATCTTAACAGCCAGAGCCATAAATTTTTTCCGCTAGCGAGTCTTCGT 2485
Query 2574 GACAACCTTCTGTTTATTTGCAGTGACGACTTCTCTATGCATGTCGTCTGCTTATATTCT 2633
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2486 GACAACCTTCTGTTTATTTGCAGTGACGACTTCTCTATGCATGTTGTCTGCTTATATTCT 2545
Query 2634 AGTTCTGTCCAAAAAACAACAGGTTATTCTTTGAGTGTGACTTTCCCTCGGATTCATTTG 2693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2546 AGTTCTGTCCAAAAAACAACAGGTTATTCTTTGAGTGTGACTTTCCCTCGGATTCATTTG 2605
Query 2694 AGATATTCATTTGTTGTTGTATCATATACTCTTATAATATTTATGAGACTGTATCCTTTA 2753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2606 AGATATTCATTTGTTGTTGTATCATATACTCTTATAATATTTATGAGACTGTATCCTTTA 2665
Query 2754 TAAACAC 2760
|||||||
Sbjct 2666 TAAACAC 2672
> Ahg475792 jgi|Araly1|475792|fgenesh2_kg.2__922__AT1G66970.1
Length=2237
Score = 1919 bits (1039), Expect = 0.0
Identities = 1813/2174 (83%), Gaps = 104/2174 (5%)
Strand=Plus/Plus
Query 147 GAATTCCCGG-CAGACAATCCAACAATGCGAGGGTTATTACGAGCTTCATCGCTTCTT-C 204
|||||||||| ||| ||||| |||| || | || ||||| ||||| | ||| ||
Sbjct 115 GAATTCCCGGCCAGGTAATCCGACAAAGC--TCG-TAATACGATCTTCAACACTT-TTAT 170
Query 205 TCTGTGGTGTTATTCTGATTCAGCTGCTTGCTGCTCAAATCCATGCTCAAAGTAAAAAAC 264
|| |||||||| ||||||||||||| ||||||||||||| |||||||||| |
Sbjct 171 TCAGTGGTGTTGTTCTGATTCAGCTATTTGCTGCTCAAATTGATGCTCAAAG------AT 224
Query 265 CTAAAAGTCCATGGCCA-ACGCTCACTGGTGATCCTCCTCTTGTGATAGCTCGTGGTGGA 323
||| ||||| |||| || ||||||| |||| || |||| |||||||| |||||||||||
Sbjct 225 CTACAAGTCGATGG-CAGACGCTCAATGGTAATGCTCCACTTGTGATTGCTCGTGGTGGG 283
Query 324 TTCTCTGGATTGTTCCCAGATTCGAGT-TACGATGCTTA-CAATTTCGCAATTCTGA-CA 380
|| |||||||| || |||||||||||| || | ||| || |||||| ||||| | | ||
Sbjct 284 TTTTCTGGATTATTTCCAGATTCGAGTCTA-GCTGCATACCAATTT-GCAATGC-AAGCA 340
Query 381 AGTGTA--CCAGATGCTGTTCTATGGTGTGATGTTCAGCTAACCAAAGATGCTCTTGGTA 438
|||||| ||| | | ||||||||||||||||||||||||||| ||||||| |||| |
Sbjct 341 AGTGTAGCCCA-A-GTTGTTCTATGGTGTGATGTTCAGCTAACTAAAGATGAAGTTGGGA 398
Query 439 TTTGCTTCCCTGATTTAACA-ATGAG-AAATTCTTCATCTATTGAAGCTGTTTACCCTAC 496
|||||||||||||||||| | || | ||| ||||| ||| ||| ||||||| | ||
Sbjct 399 TTTGCTTCCCTGATTTAA-ATCTG-GCCAATGCTTCAAATATACAAGATGTTTACTCAAC 456
Query 497 TCGACAAAAATCTTACCCGGTTAACGGAGTTC-CTACTTC-CGGTTGGTTCACCATTGAT 554
||| | ||||||||||| |||||| |||| || |||| || ||||||||| ||||||||
Sbjct 457 TCGTCGAAAATCTTACCGGGTTAATGGAG-TCACTAC-TCAGGGTTGGTTCCCCATTGAT 514
Query 555 TTCTCCTTGAAAGATCT-CAAAGATGTTAAC-TTGATCCGAGGTAT-TTTATCTCGGTCA 611
|||||||||| ||| || || | ||||| | || ||||||||||| ||| || || |||
Sbjct 515 TTCTCCTTGACAGAGCTCCAGA-ATGTT-TCTTTAATCCGAGGTATATTT-TCGCGCTCA 571
Query 612 GAAAAG-TTCGATGGTAATTCTA-ACCCGATTATGACGGTTCAAAG-CGTATCCACGCAG 668
| |||| || ||| | || | | ||||| ||||| ||| ||| ||| ||| ||||
Sbjct 572 G-AAAGATTTGAT-GCAAATGGATTTACGATTTTGACGATTC-AAGATGTAACCATGCAG 628
Query 669 ATGA-AACCATCA--TTCTTCTGGTTAAATGTTCAGCACGATGCGTTCTACGCGCAGCAC 725
| | |||| | || || ||||||||| ||||||||||||||||||||| ||| ||
Sbjct 629 -TTATTACCAAAAGGTT-TT-TGGTTAAATATTCAGCACGATGCGTTCTACGAGCAACAA 685
Query 726 AATTTGAGCATGAGCAGTTTTCTGGTT-GCAGCTTCAAAAACTG-TTCTCATTGACTTCA 783
|||||||||||||| |||||||| ||| | | ||||| ||||| ||| |||||||||||
Sbjct 686 AATTTGAGCATGAGTAGTTTTCT-GTTATCTGTTTCAAGAACTGTTTC-CATTGACTTCA 743
Query 784 TCTCTTCCCCTGAAGTGAACTTCTTTAAGAAAATTGCT-GGTCGGTTCGGGCGTAATGGA 842
||||||||||||| ||||| ||||||| |||||||| | || || ||||| |||||||||
Sbjct 744 TCTCTTCCCCTGAGGTGAATTTCTTTAGGAAAATTG-TCGGCCGTTTCGGACGTAATGGA 802
Query 843 CCAAGTCTTGTGTTCCGGTTTCTT-GGTCAAGACGAGTTCGAGCCAACGACAAACAGAAC 901
|| ||| ||||||||| ||||||| || |||| || |||||||| || | ||| ||||
Sbjct 803 CCGAGTTTTGTGTTCCAGTTTCTTAGG-AAAGAGGATTTCGAGCCGACCATGAACCGAAC 861
Query 902 TTACGGCTCTATCTTGAGTAACTTGACTTTTGTCAAGACGTTTGCTTCAGGGATTCTTGT 961
||||| || |||||||||||| | || ||||||||||||||||||||||||||||||||
Sbjct 862 CTACGGTTCAATCTTGAGTAACCTAACGTTTGTCAAGACGTTTGCTTCAGGGATTCTTGT 921
Query 962 CCCCAAGTCTTACATATTGCCACTTGATGACCAGCAGTACTTGCTTCCTCATACATCCTT 1021
||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||
Sbjct 922 TCCCAAGTCTTACATATTGCCAATTGATGAGGAACAGTACTTGCTTCCTCATACATCCTT 981
Query 1022 GGTTCAAGATGCTCACAAAGCAGGATTAGAAGTTTTTGTGTCAGGTTTTGCAAATGATAT 1081
|||||||||||||| |||||||||||| |||| | |||||||||||||||||||||| |
Sbjct 982 AGTTCAAGATGCTCATAAAGCAGGATTACAAGTATATGTGTCAGGTTTTGCAAATGATGT 1041
Query 1082 TGATATTGCACACGACTACAGTTTCGATCCAGTCTCTGAGTATCTATCTTTTGTGGACAA 1141
|||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1042 TGATATTGCATATAACTACAGTTTCGATCCAGTGTCTGAGTATCTATCTTTTGTGGACAA 1101
Query 1142 TGGCAACTTCTCTGTTGATGGTGTGCTCTCTGATTTTCCCATAACTGCATCTGC-ATCCC 1200
||| | || || ||||| ||||||||||||||||||||||| ||||||||||| | ||
Sbjct 1102 TGGTGATTTTTCGGTTGACGGTGTGCTCTCTGATTTTCCCATCACTGCATCTGCGA-CCG 1160
Query 1201 TTGATTGCTTCTCCCACGTTGGCAGAAACGCTACAAAACAAGTGGATTTTCTTGTTATAA 1260
|||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1161 TTGACTGCTTCTCCCACATTGGCAGAAACGCTACAAAACAAGTGGATTTTCTTGTTATAT 1220
Query 1261 CCAAAGATGGTGCGAGTGGAGACTATCCTGGATGTACAGAC-TTGGCATATAAGAAGGCA 1319
| ||| ||||||||||||| ||||||||||||||||||||| ||| ||||| |||| |||
Sbjct 1221 CAAAAAATGGTGCGAGTGGGGACTATCCTGGATGTACAGACGTTG-CATATGAGAACGCA 1279
Query 1320 ATCAAAGATGGTGCTGATGTAATCGATTGCTCGGTCCAATTGTCCAGCGATGGTACACCC 1379
|||||||||||||||||||| || |||||||| |||||| |||| ||||| |||| ||||
Sbjct 1280 ATCAAAGATGGTGCTGATGTTATTGATTGCTCAGTCCAAATGTCTAGCGACGGTATACCC 1339
Query 1380 TTTTGCTTAAGTTCGATCGATCTCGGGAACAGCACGACGGTCTCCCTAACTGCTTTC-AG 1438
||||||||||| || || |||||||| |||| || |||||| ||| |||| |||| ||
Sbjct 1340 TTTTGCTTAAGGTCAATAAATCTCGGGGACAGTACAACGGTCGCCCAAACT-CTTTATAG 1398
Query 1439 AAACCGTTCAACAACTGTTCCTGAG-TTGGGCTCACTTGGTGCAATATACACTTTCAGTC 1497
||||||||||| ||||||||||| || | |||| ||| || |||||||||||| ||||
Sbjct 1399 CAACCGTTCAACTCCTGTTCCTGAGATTAG-CTCAGTTGCTGGAATATACACTTTTAGTC 1457
Query 1498 TCACATGGGCTGAGATCCAGACCTTGACTCCTGCTATTTCAAACCCCTAC---AGAGTA- 1553
|||||||| |||||||||||| |||||||||||||||||||||||||||| || ||
Sbjct 1458 TCACATGGCCTGAGATCCAGAACTTGACTCCTGCTATTTCAAACCCCTACTTCAGGGTTT 1517
Query 1554 ACCAGCCTGTTT--AGGAATCCAAAACAGAAAAATGCTGGGAAGCT--TTTCTCACTTTC 1609
|| | | ||| || ||||| ||| |||||||| | |||| ||| |||| | |||||
Sbjct 1518 ACG-G--TATTTCCAGAAATCCGAAAGAGAAAAATTCAGGGACGCTCATTTC-C-CTTTC 1572
Query 1610 TGATTTCCTA-AGCTTGGCAAAAAACTCCACCTCTCTCTCCGGTGTTTTGATCAGTGTAG 1668
| |||||| | || |||||| || | ||| ||||||||||||||||||||||||||||
Sbjct 1573 CCAATTCCTAGACCT-GGCAAAGAATTACACTTCTCTCTCCGGTGTTTTGATCAGTGTAG 1631
Query 1669 AGAATGCGGCATACCTGAGAGAGGAGCAAGGGCTCGACGTTGT-CAAAGCGGTTCTTGAT 1727
||||||| |||||| |||||||| |||||||||||||||| || ||| |||||||| |||
Sbjct 1632 AGAATGCAGCATACTTGAGAGAGAAGCAAGGGCTCGACGTGGTTCAA-GCGGTTCTCGAT 1690
Query 1728 ACACTCACACAGACTGGCTACAGCAATAGTACAGCCACAA-A--GGTCATGATTCAGTCA 1784
|||||||| | ||||| |||| |||| | ||| |||||| | |||||||||||||||
Sbjct 1691 ACACTCACGGAAACTGGTTACAACAATGGGACAACCACAACAAAGGTCATGATTCAGTCT 1750
Query 1785 ACAAACAGCTCGGTTCTAGTTGACTTCAAGAAGCAGAGCCAGTACGAGACTGTCTACAAA 1844
|| |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1751 ACCAACAGCTCAGTTCTAGTTGACTTCAAGAAGCAGAGCAAGTACGAGACTGTCTACAAA 1810
Query 1845 GTTGAAGAAAACATCCGTGATATTC-TCGACT-CTGCTATTGAAGACATAAAGAAATTCG 1902
||||||||| ||| || |||||| | |||| | || |||||||||||||||||||| |
Sbjct 1811 ATTGAAGAAACCATTGGTAATATTCGT-GACTAC-GCCATTGAAGACATAAAGAAATTTG 1868
Query 1903 CTGATGCTGTTGTGATCCA-AAA-ATTATCAGTCTTTCCTGTCGCTCAGTCGTT-CATCA 1959
|| | |||||||| ||| | ||| ||| ||||||||||| | || | | ||| | |||
Sbjct 1869 CTAACGCTGTTGTCATCAACAAAGATT--CAGTCTTTCCTAACTCTGATTTGTTTC-TCA 1925
Query 1960 C-AACGCAAACCAATGTTGTGGAGA-AGCTGCAGAAGTCTCAGCTCCCAGTTTATGTGGA 2017
| || ||||||||| |||||||||| | ||| |||||||||||||| | |||||||||||
Sbjct 1926 CTAA-GCAAACCAAAGTTGTGGAGAGA-CTGAAGAAGTCTCAGCTCACGGTTTATGTGGA 1983
Query 2018 ACTGTTTCAGAATGAGTTTTTATCTCAACCATATGACTTCTTTGCTGATGCAACCGTTGA 2077
|||||||| |||||||||| |||| ||| ||| ||||||||| ||||||||||| |||||
Sbjct 1984 ACTGTTTCGGAATGAGTTTGTATCGCAAGCATTTGACTTCTTCGCTGATGCAACTGTTGA 2043
Query 2078 GATAAACTCTTATATCACTGGAGCCGGTATAAATGGAACCATCACCGAGTTCCCTTTTAC 2137
||||||| | |||||| |||| |||||| | |||||||||||||| ||||||||||| ||
Sbjct 2044 GATAAACACATATATCTCTGGCGCCGGTCTCAATGGAACCATCACAGAGTTCCCTTTCAC 2103
Query 2138 AGCTGCAAGATACAAAAGGAATCTATGTTTGGGCAGAAAAGAAACTAT-ACCTTACATGG 2196
||||||||||||||||||||||| ||||||||| |||||||||| || |||||| |||
Sbjct 2104 AGCTGCAAGATACAAAAGGAATCGATGTTTGGGTAGAAAAGAAA-TACCACCTTATATGT 2162
Query 2197 CCCCTGCCCAACCCGGTGCCCTCTTAACCCTTGTGAGTCCTACTG-CCTTTCCTCCAGCC 2255
||| |||||||||| ||||||| || || ||| |||| ||| |||| |||||||||
Sbjct 2163 TACCTATTCAACCCGGTGGCCTCTTAGCCATTATGAATCCT-CTGGCCTTACCTCCAGCC 2221
Query 2256 GAAGCTCCAAACCC 2269
|||||||||||||
Sbjct 2222 CAAGCTCCAAACCC 2235
> Ahg475793 jgi|Araly1|475793|fgenesh2_kg.2__923__AT1G66980.1
Length=3307
Score = 1886 bits (1021), Expect = 0.0
Identities = 1821/2200 (83%), Gaps = 83/2200 (4%)
Strand=Plus/Plus
Query 204 CTCTGTGGTGTTATTCTGATT-CAGCTGCTTGCTGCTCAAATCCATGCTCAAAGTAAAAA 262
|||| ||||||| ||||| || |||||| |||||||||||||| ||||||||||
Sbjct 4 CTCTATGGTGTTGTTCTG-TTACAGCTGTTTGCTGCTCAAATCAATGCTCAAAG------ 56
Query 263 ACCTAAAAGTCCATGGCCA-ACGCTCACTGGTGATCCTCCTCTTGTGATAGCTCGTGGTG 321
| ||| |||| ||||| || ||||| | |||||| |||| || ||||| ||||||||||
Sbjct 57 ATCTACAAGTACATGG-CAGACGCTGAGTGGTGAAGCTCCACTAGTGATTGCTCGTGGTG 115
Query 322 GATTCTCTGGATTGTTCCCAGATTCGAGT-TACGATGCTTA-CAATTTCGCAATTCTGAC 379
|||| |||||| | || |||||||| ||| | || ||| || |||||| ||||| | | |
Sbjct 116 GATTTTCTGGACTATTTCCAGATTCTAGTCT-CGCTGCATATCAATTT-GCAATGCAGGC 173
Query 380 AAGTGT--ACCAGATGCTGTTCTATGGTGTGATGTTCAGCTAACCAAAGATGCTCTTGGT 437
|||||| |||| | | ||||||||||||||||||||||||||| ||||||| ||||
Sbjct 174 AAGTGTAGACCA-A-GTTGTTCTATGGTGTGATGTTCAGCTAACTAAAGATGAAGTTGGG 231
Query 438 ATTTGCTTCCCTGATTTAACA-ATGAG-AAATTCTTCATCTATTGAAGCTGTTTACCCTA 495
||||||||||||||||||| | || | ||| ||||| ||| ||| ||||||| | |
Sbjct 232 ATTTGCTTCCCTGATTTAA-ATCTG-GCCAATGCTTCAAATATACAAGATGTTTACTCAA 289
Query 496 CTCGACAAAAATCTTACCCGGTTAACGGAGTTC-CTACTTC-CGGTTGGTTCACCATTGA 553
|||| | |||||||||||||||||| |||| || |||| || ||||||||| |||||||
Sbjct 290 CTCGTCGAAAATCTTACCCGGTTAATGGAG-TCACTAC-TCAGGGTTGGTTCCCCATTGA 347
Query 554 TTTCTCCTTGAAAGATCT-CA-AA-G--ATG-TTAACTTGATCCGAGGTATTTTATCTCG 607
||||||||||| ||| || || || | || || |||||||||||| || ||||| ||
Sbjct 348 TTTCTCCTTGACAGAGCTCCAGAATGTTTTGTTTTCCTTGATCCGAGGAATATTATCGCG 407
Query 608 GTCAGAAAAGTTCGATGGTAATTCTA-ACCCGATTAT-GACGGTTCAAAG-CGTATCCAC 664
|||||||| |||||| | || | | ||||| | |||| ||| ||| ||| |||
Sbjct 408 CTCAGAAAAATTCGAT-GAAAATGGATTTGCGATT-TCGACGATTC-AAGATGTAAACAC 464
Query 665 GCAGATGA-AACCATCA--TTCTTCTGGTTAAATGTTCAGCACGATGCGTTCTACGCGCA 721
|||| | | |||| | || || ||||||||| ||||||||||||||||||||| |||
Sbjct 465 GCAG-TTATTACCAAAAGGTT-TT-TGGTTAAATATTCAGCACGATGCGTTCTACGAGCA 521
Query 722 GCACAATT-TGAGCATGAGCAGTTTTCTGGTT-GCAGCTTCAAAAACTG-TTCTCATTGA 778
|| |||| | || |||||||||||||| || ||||| ||| ||||| ||| ||||||
Sbjct 522 ACAAAATTAT-AGTATGAGCAGTTTTCT-ATTATCAGCTGCAAGAACTGTTTC-CATTGA 578
Query 779 CTTCATCTCTTCCCCTGAAGTGAACTTCTTTAAGAAAATTGCTGGTCGGTT-CGGGCGTA 837
|||||| ||||||||||| ||| ||||||| |||||||||||| | ||| |||||| |
Sbjct 579 CTTCATATCTTCCCCTGAGGTGGGTTTCTTTAGGAAAATTGCTGG-CCGTTACGGGCGCA 637
Query 838 ATGGACCAAGTCTT-GTGTTCCGGTTTCTTGGTCAAGACGAGTTCGAGCCAACGACAAAC 896
| ||||| ||| || ||||||| ||||||||| |||| || || ||||| || ||||||
Sbjct 638 ACGGACCGAGT-TTCGTGTTCCAGTTTCTTGGGAAAGAAGATTTTGAGCCGACAACAAAC 696
Query 897 AGAACTTACGGCTCTATCTTGAGTAACTTGACTTTTGTCAAGACGTTTGCTTCAGGGATT 956
|||| || || |||||||| | |||| | || | ||||||||| ||||||||||| |||
Sbjct 697 CGAACCTATGGTTCTATCTTCAATAACCTAACATATGTCAAGACCTTTGCTTCAGGAATT 756
Query 957 CTTGTCCCCAAGTCTTACATATTGCCACTTGATGACCAGCAGTACTTGCTTCCTCATACA 1016
|| || ||||||||||||||||||||||| |||||| | || ||||||||||||| ||||
Sbjct 757 CTCGTTCCCAAGTCTTACATATTGCCACTCGATGACAAACACTACTTGCTTCCTCCTACA 816
Query 1017 TCCTTGGTTCAAGATGCTCACAAAGCAGGATTAGAAGTTTTTGTGTCAGGTTTTGCAAAT 1076
||||| ||||||||||||||||| ||||||||| || | | || ||||||||||||||||
Sbjct 817 TCCTTAGTTCAAGATGCTCACAAGGCAGGATTAAAACTATATGCGTCAGGTTTTGCAAAT 876
Query 1077 GATATTGATATTGCACACGACTACAGTTTCGATCCAGTCTCTGAGTATCTATCTTTTGTG 1136
||| ||||||||||| | ||||||||| |||||||| ||||| ||||||||||||||
Sbjct 877 GATGTTGATATTGCATATAACTACAGTTGGGATCCAGTTTCTGAATATCTATCTTTTGTT 936
Query 1137 GACAATGGCAACTTCTCTGTTGATGGTGTGCTCTCTGATTTTCCCATAACTGCATCTGCA 1196
||||||||| || ||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 937 GACAATGGCGTTTTTTCTGTCGATGGTGTGCTCTCTGATTTTCCCTTAACTGCATCTGCA 996
Query 1197 TCCCTTGATTGCTTCTCCCACGTTGGCAGAAACGCTACAAAACAAGTGGATTTTCTTGTT 1256
|| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 997 TCTGTTGACTGCTTCTCCCACGTTGGCAGAAACGCTACAAAACAAGTGGATTTTCTTGTT 1056
Query 1257 ATAACCAAAGATGGTGCGAGTGGAGACTATCCTGGATGTACAGACTTGGCATATAAGAAG 1316
|| | ||| |||| |||||||| || ||||||||||||||| ||||||||||| |||||
Sbjct 1057 ATCTCAAAAAATGGCGCGAGTGGGGATTATCCTGGATGTACAAACTTGGCATATGAGAAG 1116
Query 1317 GCAATCAAAGATGGTGCTGATGTAATCGATTGCTCGGTCCAATTGTCCAGCGATGGTACA 1376
||||||| ||||||||||||||| ||||||||| | || ||| |||| ||||| |||| |
Sbjct 1117 GCAATCAGAGATGGTGCTGATGTTATCGATTGCCCAGTTCAAATGTCTAGCGACGGTATA 1176
Query 1377 CCCTTTTGCTTAAGTTCGATCGATCTCGGGAACAGCACGACGGTCTCCCTAACTGCTT-T 1435
||||||||| ||||||||| ||||||| ||||||||| |||||| || |||| | | |
Sbjct 1177 CCCTTTTGCGCAAGTTCGATAGATCTCGCGAACAGCACAACGGTCAACCAAACT-CATCT 1235
Query 1436 CAGAAACCGTTCAACAACTGTTCCTGAG-TTGGGCTCA-CTTGGTGCAATATACACTTTC 1493
|||||||||||| | || |||||||||| || | |||| || | || ||||| |||||
Sbjct 1236 CAGAAACCGTTCCATAATTGTTCCTGAGATTAG-CTCAGCT-GCTGGAATATTTACTTTT 1293
Query 1494 AGTCTCACATGGGC-TGAGATCCAGACCTTGACTCCTGCTATTTCAAACCCCTACAGAG- 1551
|||||||||||| | ||||||||||| |||||||||||||| |||||||| | || |
Sbjct 1294 AGTCTCACATGG-CATGAGATCCAGAGTTTGACTCCTGCTATCTCAAACCCGTTTAG-GC 1351
Query 1552 TA-ACCAGCCTGTTTAGGAATCCAAAACAGAAAAATGCTGGGAAGCTT-TTCTCACTTTC 1609
| || || ||| |||||||| || || |||| ||||||| ||| || ||||| |
Sbjct 1352 TTTAC-AGTATGTCCAGGAATCCGAATGAGGGAAATTCTGGGAACCTTATT-TCACTCTA 1409
Query 1610 TGATTTCCTAAGCTTGGCAAAAAACTCCACCTCTCTCTCCGGTGTTTTGATCAGTGTAGA 1669
||| ||||||| |||||||||||||||| | |||||||||||||||||||||||| ||||
Sbjct 1410 TGAATTCCTAAACTTGGCAAAAAACTCCTCTTCTCTCTCCGGTGTTTTGATCAGTCTAGA 1469
Query 1670 GAATGCGGCATACCTGAGAGAGGAGCAAGGGCTCGACGTTGTCAAAGCGGTTCTTGATAC 1729
||||| |||||| |||||| ||||||| |||||||| || |||| |||||| |||
Sbjct 1470 GAATGTAATATACCTAAGAGAGAAGCAAGGACTCGACGTAGTTAAAGTAGTTCTTAATAG 1529
Query 1730 ACTCACACAGACTGGCTACAGCAATAGTACAGCCACAAAGGTCATGATTCAGTCAACAAA 1789
|||||| | ||||| |||| | | | ||| | || ||||||||||||||| || |
Sbjct 1530 ACTCACGGAAACTGGTTACATCTTTGGAACATT-A-AA-GGTCATGATTCAGTCTACGAC 1586
Query 1790 CAGCTCGGTTCTAGTTGACTTCAAGAAGCAGAGCCAGTACGAGACTGTCTACAAAGTTGA 1849
||||| ||||||||||||||||||||| |||||| |||||||||||||||||||| ||||
Sbjct 1587 CAGCTTGGTTCTAGTTGACTTCAAGAATCAGAGCAAGTACGAGACTGTCTACAAAATTGA 1646
Query 1850 AGAAAACATCCGTGATATTC-TCGACTCTGCTATTGAAGACATAAAGAAATTCGCTGATG 1908
||||| ||| || |||||| | ||||| || |||||||||||||||||||||||| | |
Sbjct 1647 AGAAACCATTGGTAATATTCGT-GACTCGGCCATTGAAGACATAAAGAAATTCGCTAACG 1705
Query 1909 CTGTTGTGATCCA-AAA-ATTATCAGTCTT-TCCTGTCGCTCAGTCGTTCATCACAACGC 1965
||||||| ||| | ||| ||| |||| || |||| | || | ||||| |||| ||
Sbjct 1706 CTGTTGTCATCAACAAAGATT--CAGT-TTCTCCTAACTCTGAATCGTTTGTCACGGGGC 1762
Query 1966 AAACCAATGTTGTGGAGAAGCTGCAGAAGTCTCAGCTCCCAGTTTATGTGGAACTGTTTC 2025
|||| ||||||||||||| | ||||||||||||||||||| |||||||||||||||||||
Sbjct 1763 AAACAAATGTTGTGGAGAGGTTGCAGAAGTCTCAGCTCCCGGTTTATGTGGAACTGTTTC 1822
Query 2026 AGAATGAGTTTTTATCTCAACCATATGACTTCTTTGCTGATGCAACCGTTGAGATAAACT 2085
|||||||||| | |||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1823 GGAATGAGTTTGTCTCTCAACCATATGACTTCTTCGCTGATGCAACTGTTGAGATAAACA 1882
Query 2086 CTTATATCACTGGAGC-CGGTATAAATGGAACCATCACCGAGTTCCCTTTTACAGCTGCA 2144
| |||||| ||||| | |||||| |||||||||||||| ||||||||||| |||||||||
Sbjct 1883 CATATATCTCTGGA-CACGGTATCAATGGAACCATCACAGAGTTCCCTTTCACAGCTGCA 1941
Query 2145 AGATACAAAAGGAATCTATGTTTGGGCAGAAAAGAAACTATACCTTACATGGCCCCTGCC 2204
|||||||||||||||| ||||||||| |||||||||| | |||||||||| |||
Sbjct 1942 AGATACAAAAGGAATCGATGTTTGGGTAGAAAAGAAATTCCACCTTACATGTTACCTATT 2001
Query 2205 CAACCCGGTGCCCTCTTAACCCTTGTGAGTCCTACTG-CCTTTCCTCCAGCCGAAGCTCC 2263
|||||||||| ||||||| || || ||| |||| ||| |||| ||||||||| |||||||
Sbjct 2002 CAACCCGGTGGCCTCTTAGCCATTATGAATCCT-CTGGCCTTACCTCCAGCCCAAGCTCC 2060
Query 2264 AAACCCGGTTTTCACAGATGCTGATGTCACTGAGCCACCACTACCTCCGGTTACCGCAAA 2323
||||||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||
Sbjct 2061 AAACCCGATTTTCACATATGATGATGTCACTGAGCCACCACTACCTCCGGTTATAGCAAA 2120
Query 2324 AGCCCCAACCTCATCCCCTGGAACCCCATCAACCAATGCA 2363
| ||||||||||| |||||||||| ||||||||| ||||
Sbjct 2121 ATCCCCAACCTCAACCCCTGGAACATCATCAACCATTGCA 2160
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 106005151835
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5