BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G26700.1
Length=2453
Score E
Sequences producing significant alignments: (Bits) Value
Ahg945393 jgi|Araly1|945393|scaffold_701622.1 3278 0.0
Ahg331870 jgi|Araly1|331870|fgenesh1_pm.C_scaffold_8001213 1724 0.0
> Ahg945393 jgi|Araly1|945393|scaffold_701622.1
Length=2116
Score = 3278 bits (1775), Expect = 0.0
Identities = 2003/2112 (95%), Gaps = 19/2112 (1%)
Strand=Plus/Plus
Query 195 GTGAATGGTAAGACAGTGAGAGATGTCTGGGTACGTGGGTGTTGTCGTTTCTGATCCATG 254
||||||||||| |||||||||||||||||||| ||||||||||||| |||| ||||||||
Sbjct 2 GTGAATGGTAAAACAGTGAGAGATGTCTGGGTTCGTGGGTGTTGTCCTTTCGGATCCATG 61
Query 255 GCTACAGAGCCAGTTCACTCAAGTCGAACTTCGGACTCTCAATTCCAAGTATGTGTCGGT 314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 62 GCTACAGAGCCAGTTCACTCAAGTCGAACTTCGGACTCTCAATTCCAAGTATGTGTCTAT 121
Query 315 GAAGAATCAGAATGGAAAGGTCACTATTGAAGATCTCCCTCCTCTATTTGCAAAGCTGAA 374
||||||||||| ||||||| ||||||||||| |||||||||||||||| |||||||| ||
Sbjct 122 GAAGAATCAGAGTGGAAAGATCACTATTGAATATCTCCCTCCTCTATTGGCAAAGCTCAA 181
Query 375 GGCACTTAGTGCAACATTTAAGGAAGACGAAATCAAGGGTATGCTAGGGGAATTGGGTTC 434
|||||||||||||||||||||||| || ||||||||||| || ||||||||| |||||||
Sbjct 182 GGCACTTAGTGCAACATTTAAGGAGGATGAAATCAAGGGGATACTAGGGGAAGTGGGTTC 241
Query 435 TGATACAAGCACTGATGTGAGTTTTGAAGAGTTTCTCAAGATATATCTCAACTTACTAAG 494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 242 TGATACAAGCACTGATGTGAGTTTTGAAGAGTTTCTCAAGATATATCTCAACTTACTAAG 301
Query 495 TAAAGCAGCTGAGAAATCTGGTGGTCATCATAAGAACTCATCCTCGTTTCTGAAAGCTTG 554
|||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||
Sbjct 302 TAAAGCAGCTGAGAAATCTGGTGG---TCATAAGAACTCATCCTCGTTTCTTAAATCTTG 358
Query 555 TACAACGACACTTCTTCACACTATATATCAGTCGGAGAAGGGTCCTTTTGTTCAGCACAT 614
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 359 TACAACGACACTTCTTCACACTATATATCAGTCGGAGAAGGGTTCTTTTGTTCAGCACAT 418
Query 615 CAATAGATATC-TAGGGGATGACCCCTTTTTGAAGCAGTTCCTTCCTCTTGACCCTCATT 673
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 419 CAATAGATATCTTA-AGGATGACCCCTTTTTGAAGCAGTTCCTTCCTCTTGACCCTCATT 477
Query 674 CTAATCAATTGTATGAACTTGTGAAAGATGGTGTCCTTCTATGTAAGCTTATAAATGTAG 733
||||| |||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 478 CTAATGAATTGTATGAACTTGTGAAAGATGGTGTACTTCTTTGTAAGCTTATAAATGTAG 537
Query 734 CTGTTCCCGGGACAATTGATGAACGAGCGATCAACACTAAGAGGGTACTTAATCCGTGGG 793
| ||||| |||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 538 CAGTTCCTGGGACAATAGATGAACGAGCGATCAACACGAAGAGGGTACTTAATCCGTGGG 597
Query 794 AGAGAAATGAGAATCACACGCTTTGTCTCAACTCTGCTAAAGCTGTTGGATGCTCTGTTG 853
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct 598 AGAGAAATGAGAATCACACGCTTTGTCTAAACTCTGCTAAAGCTATTGGATGCTCTGTTG 657
Query 854 TTAATATTGGCACACAAGACCTGGCCGAAGGACGGCCTCACCTGGTGCTCGGATTGATTT 913
|||||||||| ||||| ||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 658 TTAATATTGGGACACAGGACCTTGCCGAAGGACGGCCTCACCTGGTGCTTGGATTGATTT 717
Query 914 CACAACTCATAAAGATTCAAGTACTTGCTGATCTCAATTTAAAGAAGACGCCTCAGCTTG 973
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 718 CACAACTCATAAAGATTCAACTACTTGCTGATCTCAATTTAAAGAAGACGCCTCAGCTTG 777
Query 974 TTGAGTTGCTTGAGGACAGCGATGATGTCGAGGAGTTGCTGAGATTACCCCCTGAGAAAG 1033
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 TTGAGCTGCTTGAGGACAGCGATGATGTCGAGGAGTTGCTGAGATTACCCCCTGAGAAAG 837
Query 1034 TCTTACTGAAATGGATGAACTTCCATCTTAAGAAAGGGGGTTACAAGAAAACCGTCTCAA 1093
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 838 TCTTACTGAAATGGATGAACTTCCATCTTAAGAAAGGGGGTTACAAGAAAACTGTCTCAA 897
Query 1094 ACTTTTCCGCAGATTTGAAGGATGCACAAGCGTATGCCTTTCTGCTCAATGTTCTCGCAC 1153
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 898 ACTTTTCCGCAGATTTGAAGGATGCACAAGCCTATGCCTTTCTGCTCAATGTTCTCGCAC 957
Query 1154 CTGAACACTGTGACCCGGCTACACTAGATGCAAAGGATCCTCTTGAAAGAGCTGAATTGG 1213
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 958 CTGAACACTGTGACCCGGCTACACTAGATGCAAAGGATCCTCTTGAAAGGGCTGAACTGG 1017
Query 1214 TTCTCAGTCATGCAGAGAGAATGAACTGCAAGCGATACTTGACTGCAGAGGAGATCGTTG 1273
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1018 TTCTCAGTCATGCAGAGAGAATGAACTGCAAGCGATACTTGACTGCAGAAGAGATCGTTG 1077
Query 1274 AAGGATCTTCAACTTTGAATCTTGCCTTTGTGGCACAAATCTTCCATGAAAGGAATGGTC 1333
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1078 AAGGATCTCCAACTTTGAATCTTGCCTTTGTGGCACAAATATTCCATGAAAGGAATGGTC 1137
Query 1334 TAAACAAGGATGGTAAGTATGCATTTGCGGAGATGATGACCGAAGACGTAGAGACTTGTA 1393
|||| | |||||||||||| ||||||||||||||||||||||||| ||| |||||||||
Sbjct 1138 TAAATACCGATGGTAAGTATTCATTTGCGGAGATGATGACCGAAGATGTACAGACTTGTA 1197
Query 1394 GAGATGAACGATGCTACCGGCTATGGATCAACAGCCTCGGGATTGACAGTTATGTCAATA 1453
|||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct 1198 GAGAGGAACGATGCTACCGGCTATGGATCAACAGCCTGGGGATTGACATTTATGTCAATA 1257
Query 1454 ATGTATTTGAAGATGTTAGAAATGGATGGATTCTTCTTGAGGTTCTTGACAAGGTCTCTC 1513
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||
Sbjct 1258 ATGTATTTGAAGATGTTAGAAATGGATGGATTCTTCTTGAAGTTCTTGACAAGATCTCTC 1317
Query 1514 CCAGTTCAGTCAACTGGAAGCATGCTTCCAAACCACCGATTAAGATGCCGTTTAGAAAAG 1573
|| ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||
Sbjct 1318 CCGGTTCAGTCAACTGGAAGCATGCTTCCAAACCGCCAATTAAGATGCCGTTTAGAAAAG 1377
Query 1574 TAGAGAACTGCAATCAAGTCATAAAGATCGGGAAACAGCTAAAATTCTCACTTGTAAATG 1633
|||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||
Sbjct 1378 TAGAGAACTGCAATCAAGTCGTAAAGATCGGGAAACAGCTAAAATTCTCACTTGTGAATG 1437
Query 1634 TAGCTGGAAATGACATAGTTCAAGGGAATAAGAAGCTCATTCTTGGTCTCTTATGGCAGT 1693
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1438 TAGCTGGAAATGATATAGTTCAAGGGAATAAGAAACTCATTCTTGGTCTCTTATGGCAGT 1497
Query 1694 TGATGAGATTCCATATGCTCCAACTTCTCAAGAGTCTCAGATCTCGGACACTAGGTAAAG 1753
|||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct 1498 TGATGAGATTCCATATGCTCCAACTTCTCAAGAGTCTCCGATCTCGGACACAAGGTAAAG 1557
Query 1754 AGATGACTGATGCAGATATCCTCAGCTGGGCCAACAGGAAAGTAAGAACAATGGGACGAA 1813
||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||||
Sbjct 1558 AGATGACTGATGCGGATATCCTCAGCTGGGCCAACAGGAAAGTACGAACCATGGGGCGAA 1617
Query 1814 AATTGCAAATCGAGAGTTTCAAGGACAAGAGTCTATCGAGTGGGTTATTCTTCCTCAACC 1873
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 1618 AATTGCAAATCGAGAGTTTCAAGGACAAGAGTCTATCGAGCGGGGTATTCTTCCTCAACC 1677
Query 1874 TTCTATGGGCGGTTGAACCAAGAGTTGTGAACTGGAATCTTGTCACCAAGGGTGAAACAG 1933
|| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1678 TTTTATGGGCGGTTGAGCCAAGAGTTGTAAACTGGAATCTTGTCACCAAGGGTGAAACAG 1737
Query 1934 ATGATGAGAAGAGGTTGAATGCTACATACATAGTTAGTGTCGCAAGAAAGCTCGGTTGTT 1993
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1738 ATGATGAGAAAAGGTTGAATGCTACATACATAGTTAGCGTCGCAAGAAAGCTCGGTTGTT 1797
Query 1994 CGGTTTTCTTGTTACCTGAAGATATCGTGGAGGTGAATCAGAAGATGATCCTAATTTTAA 2053
||||||||||||| ||||||||||| ||||||||||||||||||||||| |||| ||||
Sbjct 1798 CGGTTTTCTTGTTGCCTGAAGATATTGTGGAGGTGAATCAGAAGATGATTTTAATCTTAA 1857
Query 2054 CGGCAAGTATAATGTACTGGAGTCTTCAGAGACATTCACGGGAGAGTTCAGATTCGTCGT 2113
||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||
Sbjct 1858 CGGCAAGTATAATGTACTGGAGTCTTCAGAGACATTCACCGGAGAGTTCTGATTCGTCGT 1917
Query 2114 CAACTCAGAGCACCACAACGACGTGCACCAGCACAGCCTCGTCCCCTGCCCCATCTGTCA 2173
|||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||
Sbjct 1918 CAACTCAGAGCACCACAACGACGTGCACCAGCACAGCCGCGTCCCCTGCTCTATCTGTCA 1977
Query 2174 CAGAAGAGGAGGAAGTCTCCTCATTGAGCG-GTGAAGTCACGAGCTTGGCCGTTG--G-T 2229
|||||||||||||||||||||||||||| | |||||||| || |||||||| ||| | |
Sbjct 1978 CAGAAGAGGAGGAAGTCTCCTCATTGAG-GAGTGAAGTCTCGTGCTTGGCCATTGATGAT 2036
Query 2230 ---GATGC-G--G---TTTCTGAAATCACCACGGTCTCAGAGGAAGCATCCATCGAATAG 2280
||||| | | |||| || |||||||| ||||||||||||||| |||||||||||
Sbjct 2037 AACGATGCAGATGCGGTTTCAGACATCACCACTGTCTCAGAGGAAGCAGCCATCGAATAG 2096
Query 2281 AGAGAGCGAGAT 2292
||||||||||||
Sbjct 2097 AGAGAGCGAGAT 2108
> Ahg331870 jgi|Araly1|331870|fgenesh1_pm.C_scaffold_8001213
Length=2142
Score = 1724 bits (933), Expect = 0.0
Identities = 1577/1884 (84%), Gaps = 60/1884 (3%)
Strand=Plus/Plus
Query 229 GTGGGTGTTGTCGTTTCTGATCCATGGCTACAGAGCCAG-TTCACTCAAGTCGAACTTCG 287
||||||||| | ||||| ||||||||| |||| || ||| || || |||||||| |||||
Sbjct 13 GTGGGTGTTATTGTTTCGGATCCATGGTTACAAAGTCAGCTT-ACACAAGTCGAGCTTCG 71
Query 288 GACTCTCAATTCCAAGTATGTGTCGGTGAAGAATCAGAATGGAAAGGTCACTATT-GAAG 346
|| ||| ||| |||||| ||| ||| |||||||||||| ||| ||||| || ||| || |
Sbjct 72 GAGTCTTAATGCCAAGTTTGTTTCGTTGAAGAATCAGAGTGGTAAGGTTAC-ATTAGAGG 130
Query 347 ATC-TCCCTCCTCTATTTG-CAAAGCTGAAGGCACTTAGTGCAACATTTAAGGAAG-ACG 403
||| ||| | || | || | | ||| ||||| |||||||| || ||||||||| || | |
Sbjct 131 ATCTTCCGT-CTGTGTTGGTC-AAGGTGAAGTCACTTAGTTCAGCATTTAAGG-AGAAAG 187
Query 404 AAATCAAG-GGTATGCTAGGG-GAATTGGGTTCTGA-TA--CAAG-CACTGATG----TG 453
||||| || | || || ||| | ||||||||||| || ||| | ||||| ||
Sbjct 188 AAATC-AGAGAAAT-CTTGGGAGGTTTGGGTTCTGATTATGAAAGTGA-TGATGATCTTG 244
Query 454 AGTTTTGAAGAGTTTCTCAAGATATATCTCAACTTACTAAG-TAAAGCAGCTGAGAAATC 512
| ||| ||| |||||||||| ||||||| ||||| | || |||||| ||||| |||||
Sbjct 245 A-TTTCGAATCGTTTCTCAAGGTATATCTAAACTTGC-GAGATAAAGCTGCTGATAAATC 302
Query 513 TGGTGGTCATCATAAGAACTCATCCTCGTTTCTGAAAGCTTGTACAACGACACTTCTTCA 572
|||||||| | |||| | ||||| || ||||| ||||| | |||||| || ||||||
Sbjct 303 TGGTGGTC-T--TAAGCATTCATCTTCATTTCTTAAAGCCGGCACAACG--AC-TCTTCA 356
Query 573 CACTATATATCAGTCGGAGAAGGG-TCCTTTTGTTCAGCACATCAATAGATATCTAGGGG 631
|| ||| | ||||| |||||||| ||| ||||||| ||||| || |||||||| ||||
Sbjct 357 TACCATAAACCAGTCAGAGAAGGGTTCC-TTTGTTCTTCACATTAACAGATATCTTGGGG 415
Query 632 ATGACCCCTTTTTGAAGCAGTTCCTTCCTCTT-GACCCTCATTCTAATCAATTGTATGAA 690
||||||| ||||||| |||||| |||||| || || || |||| ||| | |||||||||
Sbjct 416 ATGACCCGTTTTTGATGCAGTTTCTTCCT-TTAGATCCGGATTCAAATGACTTGTATGAA 474
Query 691 CTTGTGAAAGATGGTGTCCTTCTATGTAAGCTTATAAATGTAGCTGTTCCCGGGACAATT 750
||||||||||||||||| ||| ||||||||||||| ||| |||| ||||| ||||||||
Sbjct 475 CTTGTGAAAGATGGTGTGCTTTTATGTAAGCTTATTAATATAGCAGTTCCTGGGACAATA 534
Query 751 GATGAACGAGCGATCAACACTAAGAGGGTACTTAATCCGTGGGAGAGAAATGAGAATCAC 810
||||||||||| |||||||| || ||||||||||| || |||||||||||||||||||||
Sbjct 535 GATGAACGAGCCATCAACACGAAAAGGGTACTTAACCCATGGGAGAGAAATGAGAATCAC 594
Query 811 ACGCTTTGTCTCAACTCTGCTAAAGCTGTTGGATGCTCTGTTGTTAATATTGGCACACAA 870
||||| |||||||||||||| ||||||||||| ||| ||| ||||||||||| || ||
Sbjct 595 ACGCTCTGTCTCAACTCTGCGAAAGCTGTTGGCTGCAGTGTGGTTAATATTGGGACTCAG 654
Query 871 GACCTGGCCGAAGGACGGCCTCACCTGGTGCTCGGATTGATTTCACAACTCATAAAGATT 930
|||||||| |||||||| ||||| |||||||| |||||||| ||||||||||||||||||
Sbjct 655 GACCTGGCTGAAGGACGACCTCATCTGGTGCTTGGATTGATCTCACAACTCATAAAGATT 714
Query 931 CAAGTACTTGCTGATCTCAATTTAAAGAAGACGCCTCAGCTTGTTGAGTTGCTTGAGGAC 990
||| | || |||||||| | ||| ||||||| |||||| |||||||||||| | ||||||
Sbjct 715 CAACTGCTCGCTGATCTTAGTTTGAAGAAGATGCCTCAACTTGTTGAGTTGGTGGAGGAC 774
Query 991 AGCGATGATGTCGAGGAGTTGCTGAGATTACCCCCTGAGAAAGTCTTACTGAAATGGATG 1050
| ||| ||| | || || || ||||||||||| ||||||||||||||||| |||||||||
Sbjct 775 AACGAGGATATAGAAGAATTTCTGAGATTACCTCCTGAGAAAGTCTTACTCAAATGGATG 834
Query 1051 AACTTCCATCTTAAGAAAGGGGGTTACAAGAAAACCGTCT-CAAACTTTTCCGCAGATTT 1109
||||||||||| |||||||| |||||||| ||||| || | ||| ||||| | ||| |
Sbjct 835 AACTTCCATCTCAAGAAAGGCGGTTACAAAAAAACTGT-TGGAAATTTTTCATCGGATCT 893
Query 1110 GAAGGATGCACAAGCGTATGCCTT-TCTGCTCAATGTTCTCGCACCTGAACACTGTGACC 1168
|||||||||||| || |||| ||| ||| || |||||||||||||| || || ||||| |
Sbjct 894 GAAGGATGCACAGGCCTATG-CTTATCTTCTTAATGTTCTCGCACCAGAGCATTGTGATC 952
Query 1169 CGGCTACACTAGATGCAAAGGATCCTCTTGAAAGAGCTGAA-TTGGTTCTCAG-TCATGC 1226
| ||||||||| ||||| ||||| ||||||||| ||| || |||| ||| | || ||
Sbjct 953 CAGCTACACTAAATGCAGAGGATGATCTTGAAAGGGCT-AACATGGTCCTC-GAACACGC 1010
Query 1227 AGAGAGAATGAACTGCAAGCGATACTTGACTGCAGAGGAGA-TCGTTGAAGGATCTTC-A 1284
|||||||||||||||||| || || |||||||||||||| | | ||||| || |||||
Sbjct 1011 AGAGAGAATGAACTGCAAACGGTATTTGACTGCAGAGGA-ACTAGTTGAGGGGTCTTCGT 1069
Query 1285 ACTTTGAATCTTGCCTTTGTGGCACAAATCTTCCATGAAAGGAATGGTCTAAACAAGGAT 1344
| ||||||||| || ||||||||||| || || || ||||||||||| || | || |||
Sbjct 1070 A-TTTGAATCTCGCATTTGTGGCACAGATATTTCACGAAAGGAATGGCCTTAGCACTGAT 1128
Query 1345 GGTAAG-TATGCATTTGCGGAGATGATGACCGAAGACGTAGAGACTTGTAGAGATGAACG 1403
|||| | | | | ||||||||||||||||| || || || ||||||| ||||||||| |
Sbjct 1129 GGTAGGTTCT-CCTTTGCGGAGATGATGACTGAGGATTTACAGACTTGCAGAGATGAAAG 1187
Query 1404 ATGCTACCGGCTATGGATCAACAGCCTCGGGATTGACAGTTATGTCAATAATGTATTTGA 1463
||| |||||||||||||| ||||||||||||||||| ||||| ||||||||||| |||||
Sbjct 1188 ATGTTACCGGCTATGGATTAACAGCCTCGGGATTGAGAGTTACGTCAATAATGTGTTTGA 1247
Query 1464 AGATGTTAGAAATGGATGGATTCTTCTTGAGGTTCTTGACAAGGTCTCTCCCA-GTTCAG 1522
|||||||||||| |||||||||||||| || ||| | |||||||||| | ||| | ||||
Sbjct 1248 AGATGTTAGAAACGGATGGATTCTTCTGGAAGTTGTCGACAAGGTCTAT-CCAGGCTCAG 1306
Query 1523 TCAACTGGAAGCATGCTTCCAAACCACCGATTAAGATGCCGTTTAGAAAAGTAGAGAACT 1582
| ||||||||||| ||||| |||||||| ||||| ||||| ||||||||||||||||| |
Sbjct 1307 TTAACTGGAAGCAGGCTTCAAAACCACCAATTAAAATGCCTTTTAGAAAAGTAGAGAATT 1366
Query 1583 GCAATCAAGTCATAAAGATCGGGAAACAGCTAAAATTCTCACTTGTAAATGTAGCTGGAA 1642
||||||||||| | ||||| |||||| || | | |||||| || ||||||||||||||||
Sbjct 1367 GCAATCAAGTCGTGAAGATTGGGAAAGAGATGAGATTCTCGCTCGTAAATGTAGCTGGAA 1426
Query 1643 ATGACATAGTTCAAGGGAATAAGAAGCTCATTCTTGGTCT-CTTATGGCAGTTGATGAGA 1701
|||||||||||||||||||||||||||| || || || || ||| |||||||||||||||
Sbjct 1427 ATGACATAGTTCAAGGGAATAAGAAGCTTATCCTCGG-CTTCTTGTGGCAGTTGATGAGA 1485
Query 1702 TTCCATATGCTCCAACTTCTCAAGAGTCTCAGATCTCGGACACTAGGTAAAGAGATGACT 1761
||||||||||||||||||||||||||||||||||||||||| ||| ||||| |||||
Sbjct 1486 ACCCATATGCTCCAACTTCTCAAGAGTCTCAGATCTCGGACACGAGGAAAAGACATGACC 1545
Query 1762 GA-TGCAGATATCCTCAGCTGGGCCAACAGGAAAGTAAGAA-CAATGGGACGAAAATTGC 1819
|| | |||| ||| | |||||||| ||||| ||||| |||| || |||| || |||| ||
Sbjct 1546 GACT-CAGAAATCATAAGCTGGGCAAACAGAAAAGTCAGAATCA-TGGGGCGGAAATCGC 1603
Query 1820 AAATCGAGAGTTTCAAGGACAAGAGTCTATCGAGTGGGTTATTCTTCCTCAACCTTCTAT 1879
| ||||| || |||||||| ||||||||||| || || |||||||||||| | || ||||
Sbjct 1604 AGATCGAAAGCTTCAAGGATAAGAGTCTATCCAGCGGATTATTCTTCCTCGATCTCCTAT 1663
Query 1880 GGGCGGTTGAACCAAGAGTTGTGAACTGGAATCTTGTCACCAAGGGTGAAACAGATGATG 1939
|||||||||| ||||||||||| ||||||||||||||||||||||||||| |||| ||||
Sbjct 1664 GGGCGGTTGAGCCAAGAGTTGTTAACTGGAATCTTGTCACCAAGGGTGAATCAGACGATG 1723
Query 1940 AGAAGAGGTTGAATGCTACATACATAGTTAGTGTCGCAAGAAAGCTCGGTTGTTCGGT-T 1998
||||||| ||||||||||||||||| || || || ||||||||||| ||||| || || |
Sbjct 1724 AGAAGAGATTGAATGCTACATACATTGTCAGCGTAGCAAGAAAGCTTGGTTGCTCTGTCT 1783
Query 1999 TTCTTGTTACCTGAAGATATCGTGGAGGTGAATCAGAAGATGATCCTAATTTTAACGGCA 2058
|| ||||| || |||||||| ||||||||||||||||||||||| ||||| |||||||||
Sbjct 1784 TT-TTGTTGCCGGAAGATATAGTGGAGGTGAATCAGAAGATGATTCTAATCTTAACGGCA 1842
Query 2059 AGTATAATGTACTGGAGTCTTCAG 2082
||||||||||| ||||| ||||||
Sbjct 1843 AGTATAATGTATTGGAGCCTTCAG 1866
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 92445024615
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5