BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G26970.1
Length=3349
Score E
Sequences producing significant alignments: (Bits) Value
Ahg492099 jgi|Araly1|492099|fgenesh2_kg.7__1532__AT4G26970.1 5594 0.0
Ahg480186 jgi|Araly1|480186|fgenesh2_kg.3__2887__AT2G05710.1 1447 0.0
Ahg950147 jgi|Araly1|950147|scaffold_802034.1 436 4e-121
> Ahg492099 jgi|Araly1|492099|fgenesh2_kg.7__1532__AT4G26970.1
Length=3316
Score = 5594 bits (3029), Expect = 0.0
Identities = 3223/3319 (97%), Gaps = 4/3319 (0%)
Strand=Plus/Plus
Query 27 tctctctctTTCCCTCGTCCATTCCACGATCTTCTTCCAATCTCAAATCTCCCATTTTCT 86
|||||||| || |||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct 1 TCTCTCTC-TT-CCTCGTCCCTTCCACGATCTTCTTCCAATCTCAAATATCCCATTTTCT 58
Query 87 AGTG-TTTCATTTTGATCCTTCTTCCTTCCTCTGGAGATTTCTCAAATCTCTTCAACTAT 145
| | |||||||||||||||||||||||| |||||||||||||| ||||||||||||| |
Sbjct 59 -GGGCTTTCATTTTGATCCTTCTTCCTTCTTCTGGAGATTTCTCCAATCTCTTCAACTGT 117
Query 146 TTTGATTTGCCGCCATGTATCGACGCGCCACTTCCGGCGTGCGTTCTGCCTCCGCAAGGC 205
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 118 TTTGATTTGCCGCCATGTATCGACGCGCCACTTCCGGCGTGCGTTCTGCCTCCACGAGGC 177
Query 206 TTTCTTCTTCCCTCTCCAGGATCGCCTCTAGCGAGACAGCTTCGGTTTCGGCTCCATCTG 265
|||||||||||||| | | ||||||||||| |||||||||||||||||||||||| || |
Sbjct 178 TTTCTTCTTCCCTCACGAAGATCGCCTCTACCGAGACAGCTTCGGTTTCGGCTCCCTCAG 237
Query 266 CGTCGTCGCTTCGCAATCAGACGAACCGATCTAAGAGTTTCTCCTCGGCTCTCCGCTCCT 325
|| | | ||||| |||||||| ||||||||||||||| ||||| |||||||||||||| |
Sbjct 238 CGCCATTGCTTCTCAATCAGATGAACCGATCTAAGAGCTTCTCTTCGGCTCTCCGCTCGT 297
Query 326 TTCGAGTTTGCTCTGCTTCCACGCGGTGGAGCCATGGTGGGAGCTGGGGATCGCCTGCTA 385
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 298 TTCGAGTTTGCTCTGCTTCCACGCGGTGGAGCCATGGTGTGAGCTGGGGATCGCCTGCTA 357
Query 386 GCCTTCGCGCTCAAGCTAGGAATTCCACTCCGGTTATGGAGAAATTTGAACGGAAATACG 445
||||||| |||||| ||||||| ||| ||||||| |||||||||||||||||||||||||
Sbjct 358 GCCTTCGTGCTCAATCTAGGAACTCCGCTCCGGTGATGGAGAAATTTGAACGGAAATACG 417
Query 446 CAACCATGGCTTCTGAGCATTCCTACAAGGATATTTTGACAAGTCTTCCTAAACCTGGTG 505
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 418 CAACCATGGCTTCTGAGCATGCCTACAAGGATATTTTGACAAGTCTTCCTAAACCTGGTG 477
Query 506 GTGGAGAGTATGGAAAGTACTACTCGTTACCAGCTTTAAACGATCCAAGAATTGATAAGC 565
|||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 478 GTGGAGAGTATGGAAACTACTACTCGTTACCAGCTTTAAACGATCCAAGAGTTGATAAGC 537
Query 566 TGCCATTTTCTGTAAGGATACTATTGGAATCAGCGATTCGTAACTGTGACAACTATCAAG 625
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 538 TGCCATTTTCTGTAAGGATATTATTGGAATCAGCGATTCGTAACTGTGACAACTATCAAG 597
Query 626 TCACAAAGGATGACGTTGAGAAAATCCTTGACTGGGAGAATACATCTACTAAGCAGGTTG 685
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 598 TCACAAAGGATGACGTTGAGAAAATCCTCGACTGGGAGAATACATCTACTAAGCAGGTTG 657
Query 686 AAATTGCCTTCAAGCCAGCCCGTGTTATCTTACAGGACTTCACTGGAGTACCAGTTCTAG 745
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 658 AAATTGCCTTCAAGCCAGCCCGTGTTATTTTACAGGACTTCACTGGAGTACCAGTTCTAG 717
Query 746 TTGATCTTGCTTCTATGAGGGATGCAGTGAAGAATCTTGGTAGTGATCCTAGCAAGATCA 805
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 TTGATCTTGCTTCGATGAGGGATGCAGTGAAGAATCTTGGTAGTGATCCTAGCAAGATCA 777
Query 806 ACCCCTTGGTTCCTGTTGATCTTGTCGTTGATCACTCGATCCAAGTTGACTTTGCAAGGT 865
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 ACCCCTTGGTTCCTGTGGATCTTGTCGTTGATCACTCGATCCAAGTTGACTTTGCAAGGT 837
Query 866 CAGAAGATGCCGCACAGAAAAATTTGGAGCTTGAATTCAAAAGGAACAAAGAAAGATTTA 925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 838 CAGAAGATGCCGCACAGAAAAATTTGGAGCTTGAATTCAAAAGGAACAAAGAAAGATTTA 897
Query 926 CGTTCCTTAAGTGGGGTTCAACAGCCTTCCAAAACATGCTGGTCGTTCCTCCTGGGTCTG 985
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 898 CGTTCCTTAAGTGGGGTTCAACGGCCTTCCAAAACATGCTGGTCGTTCCTCCTGGGTCTG 957
Query 986 GGATTGTCCATCAGGTCAACTTGGAATACCTTGGACGTGTTGTTTTCAACTCGAAAGGAT 1045
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 958 GGATTGTCCATCAGGTCAACTTGGAATACCTTGGACGTGTTGTTTTCAACTCGAATGGAT 1017
Query 1046 TTCTCTACCCTGATAGCGTTGTTGGAACCGACTCCCACACAACCATGATTGATGGATTAG 1105
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 TTCTCTACCCTGATAGCGTGGTTGGAACCGACTCCCACACAACCATGATTGATGGATTAG 1077
Query 1106 GAGTCGCTGGGTGGGGTGTTGGAGGAATTGAGGCAGAGGCAGCAATGCTTGGTCAGCCCA 1165
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1078 GAGTCGCTGGGTGGGGTGTTGGAGGAATTGAGGCAGAGGCAGCAATGCTTGGTCAGCCCA 1137
Query 1166 TGAGCATGGTGTTACCTGGCGTGGTCGGGTTTAAGTTGGATGGAAAGTTGAAGGAAGGGG 1225
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1138 TGAGCATGGTGTTACCTGGCGTGGTCGGATTTAAGTTGGATGGAAAGTTGAAGGAAGGGG 1197
Query 1226 TTACTGCTACTGATTTAGTTCTCACTGTGACCCAAATATTGAGGAAGCATGGTGTTGTCG 1285
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1198 TTACTGCTACTGATTTAGTTCTCACTGTGACCCAAATATTAAGGAAGCATGGTGTTGTCG 1257
Query 1286 GCAAGTTTGTTGAATTTTATGGTGAGGGGATGAGTGAACTTTCACTGGCTGATAGAGCCA 1345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 GCAAGTTTGTTGAATTTTATGGTGAGGGGATGAGTGAACTTTCACTGGCTGATAGAGCCA 1317
Query 1346 CAATTGCAAATATGTCTCCCGAGTATGGAGCAACTATGGGTTTCTTCCCAGTGGATCATG 1405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1318 CAATTGCAAATATGTCTCCCGAGTATGGAGCAACTATGGGTTTCTTCCCAGTGGATCATG 1377
Query 1406 TTACACTGGAGTACCTGAAGTTGACAGGAAGAAGCGATGAAACTGTGTCAATGATAGAAT 1465
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1378 TTACACTGGAGTACCTGAAGTTGACAGGAAGAAGCGACGAAACTGTGTCAATGATAGAAT 1437
Query 1466 CATATTTGCGCGCAAACAATATGTTTGTTGACTACAACGAGCCTCAGCAAGAAAGAGCAT 1525
||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1438 CATATTTACGCGCAAACAATATGTTCGTTGACTACAACGAGCCCCAGCAAGAAAGAGCAT 1497
Query 1526 ACACATCTTATCTGCAGTTAGATTTGGGACATGTTGAACCATGTATTTCTGGTCCTAAAA 1585
||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct 1498 ACACATCTTATTTGCAGTTGGATTTGGGACATGTTGAACCATGTATTTCTGGGCCTAAAA 1557
Query 1586 GGCCTCATGACCGAGTGCCTCTGAAAGATATGAAGGCTGACTGGCATGCATGCCTTGACA 1645
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1558 GGCCTCATGACCGAGTGCCTCTGAAAGACATGAAGGCTGACTGGCATGCATGCCTTGACA 1617
Query 1646 ATCCTGTTGGATTCAAGGGTTTTGCAGTGCCAAAAGAAAAACAAGAAGAAGTTGTGAAGT 1705
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618 ATCCTGTTGGATTCAAGGGTTTTGCAGTGCCAAAAGAAAAACAAGAAGAAGTTGTGAAGT 1677
Query 1706 TCTCATACAACGGACAACCTGCTGAGATCAAGCATGGTAGTGTTGTTATTGCGGCAATTA 1765
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1678 TCTCTTACAACGGACAACCTGCTGAGATCAAGCATGGTAGTGTTGTTATTGCGGCAATTA 1737
Query 1766 CTAGTTGTACAAACACGTCAAACCCTAGTGTCATGATCGGAGCAGCACTCGTTGCaaaaa 1825
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1738 CTAGTTGTACAAACACGTCAAACCCTAGTGTCATGATCGGGGCAGCACTCGTTGCAAAAA 1797
Query 1826 aaGCTTCAGATCTTGGCCTGAAGGTAAAACCATGGGTTAAGACAAGTCTTGCTCCAGGGT 1885
||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1798 AAGCTTCGGATCTTGGCCTGGAGGTAAAACCATGGGTTAAGACAAGTCTTGCTCCAGGGT 1857
Query 1886 CTAGAGTTGTCGAGAAATATTTGGATCGAAGTGGGCTCCGAGAGTCCTTGACCAAGCAAG 1945
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1858 CTAGAGTTGTCGAGAAATATTTGGATCGAAGTGGGCTCCGAGAGTACTTGACCAAGCAAG 1917
Query 1946 GATTCGAAATTGTCGGCTACGGCTGCACAACATGCATTGGGAATTCTGGCAACCTTGACC 2005
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1918 GATTCGAAATTGTCGGCTACGGCTGCACAACATGCATTGGGAATTCTGGAAACCTTGACC 1977
Query 2006 CAGAAGTTGCATCTGCTATAGAAGGAACTGATATCATCCCAGCTGCTGTGCTGTCTGGAA 2065
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1978 CAGAAGTTGCATCTGCTATAGAAGGAACTGATATCATCCCGGCTGCTGTGCTGTCTGGAA 2037
Query 2066 ACCGAAACTTTGAAGGTCGTGTTCATCCACAAACAAGAGCAAACTATCTTGCGTCACCAC 2125
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2038 ACCGAAACTTTGAAGGTCGTGTTCATCCACAAACAAGAGCTAACTATCTTGCGTCACCAC 2097
Query 2126 CATTAGTTGTTGCTTATGCCCTTGCTGGAACGGTGGACATTGATTTTGAGAAAGAGCCTA 2185
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2098 CATTAGTTGTTGCTTATGCCCTTGCTGGAACGGTTGACATTGATTTTGAGAAAGAGCCTA 2157
Query 2186 TAGGAACCAGAAGTGATGGAAAAAGTGTGTACCTGAGGGATGTATGGCCAAGCAATGAGG 2245
|||||||| |||| ||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 2158 TAGGAACCGGAAGAGATGGCAAAAGTGTGTACCTGAGGGACGTATGGCCAAGCAATGAGG 2217
Query 2246 AAGTTGCTCAGGTTGTTCAATATAGCGTGCTACCAAGCATGTTCAAGAGCTCGTACGAAA 2305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2218 AAGTTGCTCAGGTTGTTCAATATAGCGTGCTACCAAGCATGTTCAAGAGCTCGTACGAAA 2277
Query 2306 CAATAACAGAGGGAAACCCCTTGTGGAATGAACTCTCTGCACCGAGTTCCACGTTATATT 2365
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2278 CAATAACAGAGGGAAACCCCTTGTGGAATGAACTCTCTGCTCCGAGTTCCACGTTATATT 2337
Query 2366 CTTGGGATCCAAACTCCACGTACATTCATGAACCTCCGTATTTCAAGAATATGACCGCAA 2425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2338 CTTGGGATCCAAACTCCACGTACATTCATGAACCTCCGTATTTCAAGAATATGACCGCAA 2397
Query 2426 ATCCACCTGGTCCTCGTGAAGTGAAGGATGCTTACTGCTTGTTGAACTTTGGGGACAGTG 2485
||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| |
Sbjct 2398 ATCCACCTGGTCCTCGTCAAGTGAAGGATGCCTACTGCTTGTTGAACTTTGGGGACAGCG 2457
Query 2486 TAACAACAGACCACATCTCTCCAGCAGGAAACATTCAAAAAACTAGTCCTGCTGCAAAGT 2545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2458 TAACAACAGACCACATCTCTCCAGCAGGAAACATTCAAAAAACTAGTCCTGCTGCAAAGT 2517
Query 2546 TTCTAATGGACCGTGGTGTGATTTCGGAAGATTTCAACTCATATGGAAGTCGAAGGGGAA 2605
||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||
Sbjct 2518 TTCTAATGGACCGTGGTGTGATTCCAGAAGACTTCAACTCATATGGAAGTCGAAGGGGAA 2577
Query 2606 ACGACGAGGTTATGGCTCGTGGTACATTTGCCAATATCCGTATTGTTAACAAGCTCTTGA 2665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2578 ACGACGAGGTTATGGCTCGTGGTACATTTGCCAATATCCGTATTGTTAACAAGCTCTTGA 2637
Query 2666 AAGGAGAAGTTGGCCCCAACACTGTTCACATTCCGACTGGAGAGAAGCTTAGCGTTTTCG 2725
||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
Sbjct 2638 AAGGAGAAGTTGGCCCCAAGACTGTTCACATTCCAACTGGAGAGAAGCTTAGCGTTTTTG 2697
Query 2726 ATGCAGCAAGTAAATACAAGACCGCTGAACAGGATACGATCATCCTGGCTGGTGCTGAGT 2785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2698 ATGCAGCAAGTAAATACAAGACCGCTGAACAGGATACGATCATCCTGGCTGGTGCTGAGT 2757
Query 2786 ATGGAAGTGGTAGCTCTCGGGATTGGGCTGCAAAGGGTCCCTTGCTTTTGGGAGTGAAAG 2845
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 2758 ATGGAAGTGGTAGCTCTCGGGATTGGGCTGCAAAGGGCCCCTTGCTTTTGGGAGTAAAAG 2817
Query 2846 CTGTAATTGCCAAGAGCTTTGAGAGAATCCATCGCAGCAACCTGGCTGGTATGGGGATCA 2905
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2818 CTGTAATTGCCAAGAGCTTTGAGAGAATCCACCGCAGCAACCTGGCTGGTATGGGGATCA 2877
Query 2906 TTCCTCTGTGTTTCAAGGCTGGGGAGGACGCGGAAACCCTTGGACTCACTGGTCATGAAC 2965
||||||||||||||||| | |||||||| ||||||||||||||||| || ||||||||||
Sbjct 2878 TTCCTCTGTGTTTCAAGTCCGGGGAGGATGCGGAAACCCTTGGACTGACCGGTCATGAAC 2937
Query 2966 GCTACACAGTCCACCTTCCTACAAAAGTTAGTGACATTAGACCCGGTCAAGACGTCACTG 3025
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2938 GCTACACAGTCCACCTTCCTACAAAAGTCAGTGACATTAGACCCGGTCAAGACGTCACTG 2997
Query 3026 TAACCACTGACAGTGGCAAATCCTTTGTCTGCACCCTGCGTTTTGATACAGAGGTGGAAT 3085
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2998 TAACCACTGACAGTGGCAAATCCTTTGTCTGCACCCTGCGTTTTGATACAGAGGTCGAAT 3057
Query 3086 TGGCATACTATGATCACGGCGGTATTCTACCATACGTCATCCGGAGTTTGAGCGCCAAGT 3145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3058 TGGCATACTATGATCACGGCGGTATTCTACCATACGTCATCCGGAGTTTGAGCGCCAAGT 3117
Query 3146 GATCTCAAAGTGTTTTTCGCCTTTTGTTTTCTTCTTATGTTAAGATCCCAATAAAGCAAG 3205
||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3118 GATCTCAGAGTGTTTCTCGCCTTTTGTTTTCTTCTTATGTTAAGATCCAAATAAAGCAAG 3177
Query 3206 TTTTGTGAGCATCTTTTTTCTTTCAGGTTACACTAAACCTTTGTTGGCAAGAGTTGCTAT 3265
|||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 3178 TTTTGTGAGCATCTCTTTTCTTTCAGGTTACACTAAACCTTTATCGGCAAGAGTTGCTAT 3237
Query 3266 AAGAAAATGCAAAAATACACACTTCATTTTATAAACAGTTTAACGTATCTTTGACCGTAG 3325
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 3238 AAGAAAATGCAAAAATACACACTTCATTCTATAAACAGTTTAACGTATCTTTGACTGTAG 3297
Query 3326 CATCAATTGAAAGACCTGG 3344
|| ||||||||||| ||||
Sbjct 3298 CACCAATTGAAAGATCTGG 3316
> Ahg480186 jgi|Araly1|480186|fgenesh2_kg.3__2887__AT2G05710.1
Length=3451
Score = 1447 bits (783), Expect = 0.0
Identities = 2091/2712 (77%), Gaps = 132/2712 (5%)
Strand=Plus/Plus
Query 449 CCATGGCTTCTGAGCATTCC---TACAAGGATATTTTGACAAGTCTTCCTAAACCTGGTG 505
||||||| || ||||| ||| || |||| || || || | ||||||||| |||||||
Sbjct 446 CCATGGCGTCAGAGCA-TCCGTTTA-AAGG-GATCTTCACTACTCTTCCTAAGCCTGGTG 502
Query 506 GTGGAGAGTAT-GGAAAGTACTACTCG-TTACCAGCT-TTAAACGATCCAAGAATTGATA 562
|||| || | | ||||||| ||| | | ||||| ||| || || |||||| |||||||||
Sbjct 503 GTGGTGAAT-TCGGAAAGTTCTA-TAGCTTACCTGCTCTT-AATGATCCACGAATTGATA 559
Query 563 AGCTGCCATT-TTCTGTAAGGATAC-TATTGGAATCAGCGATTCGTAACTGTGACAACTA 620
| || || || ||| | ||||| | | || ||||| ||||||||||| ||||| ||||
Sbjct 560 AACTTCC-TTACTCTATTAGGATTCTTCTT-GAATCTGCGATTCGTAATTGTGATAACTT 617
Query 621 TCAAGTCACAAAGGATGACGTTGAGAAAATCCTTGACTGGGAGAATACATCTACTAAGCA 680
|||||| || ||||| || |||||||| || |||||||||| || |||||| |||| ||
Sbjct 618 TCAAGTTACTAAGGAAGATGTTGAGAAGATTATTGACTGGGAAAAAACATCTCCTAAACA 677
Query 681 GGTTGAAATTGCC-TTCAAGCCAGCCCGTGTT-ATCTTACAGGACTTCACTGGAGTACCA 738
|| || ||| || || || || || |||||| |||| |||||||| |||||||| |||
Sbjct 678 AGTCGAGATT-CCGTTTAAACCGGCTCGTGTTCTTCTT-CAGGACTTTACTGGAGTCCCA 735
Query 739 GTTCTAGTTGATCTTGCTTCTATGAGGGATGCAG-TGAAGAATCTTGGTAGTGA-TCCTA 796
| | | ||||| ||||||| |||| | ||||| | |||| || || || ||||| ||| |
Sbjct 736 GCTGTTGTTGACCTTGCTTGTATGCGTGATGC-GATGAATAAGCTGGGCAGTGATTCC-A 793
Query 797 GCAAGATCAACCCCTTGGTTCCTGTTGATCTTGTCG-TTGATCACTCGATCCAAGTTGAC 855
||| ||||| || |||||||| || |||||||| | ||||||||||| | ||||||||
Sbjct 794 ACAAAATCAATCCTTTGGTTCCGGTGGATCTTGT-GATTGATCACTCGGTTCAAGTTGA- 851
Query 856 T-TTGCAAGGTCAGAAG-ATGC--CGCACAGAAAAATTTGGAGCTTGAATTCAAAAGGAA 911
| |||| || || | || |||| ||| || ||| |||||||||| ||| | |||||
Sbjct 852 TGTTGCTAGATCTG-AGAATGCAGTGCA-AG-CAAACATGGAGCTTGAGTTCCAGAGGAA 908
Query 912 CAAAGAAAGATTTACGTTCCTTAAGTGGGGTTCAACAGCCTTCCAAAACATGCTGGTCGT 971
||| || || ||| | ||||||||||||||||| || || ||||| |||||||| || ||
Sbjct 909 CAAGGAGAGGTTTGCTTTCCTTAAGTGGGGTTCTACTGCGTTCCAGAACATGCTTGTTGT 968
Query 972 TCCTCCTGGGTCTGGGATTGTCCATCAGGTCAACTTGGAATACCTTGGACGTGTTGTTTT 1031
|||||||| ||||| ||||| ||||||||||| |||||||| |||||| | ||||| ||
Sbjct 969 GCCTCCTGGCTCTGGTATTGTGCATCAGGTCAATTTGGAATATCTTGGAAGAGTTGTGTT 1028
Query 1032 CAACT-CGAAAGGATTTCTCTACCCTGATAGCGTTGTTGGAACCGACTCCCACACAACCA 1090
||| | | ||||| |||||||||| || ||||| |||||||| || || || ||||| |
Sbjct 1029 CAA-TACCAAAGGCCTTCTCTACCCAGACAGCGTGGTTGGAACTGATTCACATACAACTA 1087
Query 1091 TGATTGATGGATTAGGAGTCGCTGGGTGGGGTGTTGGAGGAATTGAGGCAGAGGCAGCAA 1150
|||||||||| || ||||| ||||| ||||| |||||||| ||||| || |||||| |||
Sbjct 1088 TGATTGATGGTTTGGGAGTTGCTGGATGGGGAGTTGGAGGCATTGAAGCTGAGGCAACAA 1147
Query 1151 TGCTTGGTCAGCCCATGAGCATGGTGTTACCTGGCGTGGTCGGGTTTAAGTTGGATGGAA 1210
||||||| ||||||||||| ||||| || ||||| || || || || || ||| ||||
Sbjct 1148 TGCTTGGGCAGCCCATGAGTATGGTATTGCCTGGTGTTGTTGGATTCAAACTGGCCGGAA 1207
Query 1211 AGTTGAAGGAA-GGGGTTACTGCTACTGATTTAGTTCTCACTGTGACCCAAATATTGAGG 1269
| || | || || || || ||||||||||| ||||| || ||||| ||||| |||||
Sbjct 1208 AAATG-CGTAATGGTGTAACAGCTACTGATTTGGTTCTAACAGTGACTCAAATGCTGAGG 1266
Query 1270 AAGCATGGTGTTGTCGGCAAGTTTGTTGAATTTTATGGTGAGGGGATGAGTGAACTTTCA 1329
|||||||||||||| || ||||||||||| ||||||||||| || ||||||| || ||
Sbjct 1267 AAGCATGGTGTTGTTGGAAAGTTTGTTGAGTTTTATGGTGATGGTATGAGTGGGCTGTCC 1326
Query 1330 CTGGCTGATAGAGCCACAATTGCAAATATGTCTCCCGAGTATGGAGCAACTATGGGTTTC 1389
|| ||||| || || || ||||| || ||||||||||||||||| ||||| ||||| |||
Sbjct 1327 CTAGCTGACAGGGCAACCATTGCCAACATGTCTCCCGAGTATGGTGCAACCATGGGCTTC 1386
Query 1390 TTCCCAGTGGATCATGTTACACTGGAGTACCTGAAGTTGACAGGAAGAAGCGATGAAACT 1449
||||| |||||||||||||| || |||| || || ||||| |||||||||||||| ||
Sbjct 1387 TTCCCTGTGGATCATGTTACTCTACAGTATCTCAAATTGACTGGAAGAAGCGATGAGACA 1446
Query 1450 GTGTCAATGATAGAATCATAT-TTGCGCGCAAACAATATGTTTGTTGACTACAACGAGCC 1508
||| | ||||| ||| ||||| || ||||||||||||||||||||||||||||| |||||
Sbjct 1447 GTGGCCATGATTGAAGCATATCTT-CGCGCAAACAATATGTTTGTTGACTACAATGAGCC 1505
Query 1509 TCAGCAAGAAAGAG-CATACACATCTTATCT-GCAGTTAGATTTGGGACA-TGTTGAACC 1565
||||||||| | | | ||| |||| ||||| | | | | | ||| | | |||||||||
Sbjct 1506 TCAGCAAGACCGGGTC-TACTCATCATATCTAGAACTGA-ACCTGG-ATAATGTTGAACC 1562
Query 1566 ATGTATTTCTGGTCCTAAAA-GGCCTCATGACCGAGTGCCTCTGAAAGATATGAAGGCTG 1624
|| |||||||| || ||| |||| ||||| || || || |||| |||||||| ||||
Sbjct 1563 TTGCATTTCTGGACC-AAAGCGGCCACATGATCGTGTTACTTTGAAGGATATGAAAGCTG 1621
Query 1625 ACTGGCATGCATGCCTTGACAATCCTGTTGGATTCAAGGGTTTTGC-AGTGCCAAAAGAA 1683
|||||||| |||| ||||||| | ||||| |||||||||||||| | | || |||||
Sbjct 1622 ACTGGCATTCATGTCTTGACAGTAAAGTTGGGTTCAAGGGTTTTGCTA-TACCTAAAGAG 1680
Query 1684 AAACAAGAAGAAGTTGTGAAGTTCTCATACAACGGACAACCTGCTGAGATCAAGCATGGT 1743
||||||| |||| || || || || | ||| |||||||| || ||| | || |||||
Sbjct 1681 GCACAAGAAAAAGTGGTAAATTTTTCGTTCAATGGACAACCAGCAGAGCTTAAACATGGA 1740
Query 1744 AGTGTTGTTATTGCGGCAATTACTAGTTGTACAAACACGTCAAA-CCCTAGTGTCATGAT 1802
||||| || ||||| ||||| || || ||||| || || ||||| ||| || |||||| |
Sbjct 1741 AGTGTGGTGATTGCTGCAATCACAAGCTGTACTAATACATCAAATCCC-AGCGTCATGCT 1799
Query 1803 CGGAGCAGCACTCGTTGCaaaaaaaGCTTCAGATCTTGGCCTGA-AGGTAAAACCATGGG 1861
|| || | || |||||||| || |||| || ||||| || | |||| || || |||
Sbjct 1800 TGGTGCTGGTCTTGTTGCAAAGAAGGCTTGTGACCTTGGACT-ACAGGTTAAGCCTTGGA 1858
Query 1862 TTAAGACAAGTCTTGCTCCAGGG-TCTAG-AGTTGTCGAGAAA-TATTTGGATCGAAGTG 1918
| |||||||||||||| || ||| || || |||||| | ||| || || || ||| |
Sbjct 1859 TAAAGACAAGTCTTGCGCC-GGGCTC-AGGAGTTGTT-ACAAAATACTT--ATTAAAGAG 1913
Query 1919 -GG-CTCCGAGAGTC-CTTGACC-AAGCAAGGATTCGAA-ATTGTCGGCTACGGCTGCAC 1973
|| || | ||| | || || || || || ||| || |||||||||||||| |||||
Sbjct 1914 TGGACTGCAAGAATATCT-GAATGAA-CAGGGTTTC-AATATTGTCGGCTACGGGTGCAC 1970
Query 1974 AACATGCATTGGGAATTCTGGC-AACCTTGACCCAGAAGTTGCATCTGCTAT-A--GAAG 2029
|||||||||||||||||||| || || | | ||| | | ||||||| | |||
Sbjct 1971 TACATGCATTGGGAATTCTGGAGAAA-TTAATGAATCAGTGGGAGCTGCTATTACCGAA- 2028
Query 2030 GAACTGATATCATCCCAGCTGCTGTGCTGTCTGGAAACCGAAACTTTGAAGGTCGTGTTC 2089
|| ||| || | | |||||||| || || || ||| | |||||||| || |||||||
Sbjct 2029 -AA-TGACATTGTGGCGGCTGCTGTTCTTTCCGGGAACAGGAACTTTGAGGGGCGTGTTC 2086
Query 2090 ATCCACAAACAAGAGCAAACTATCTTGCGTCACCACCATTAGTTGTTGCTTATGCCCTTG 2149
|||| | ||||||||| ||||| ||||| || || || || || ||||| ||||| ||||
Sbjct 2087 ATCCTCTAACAAGAGCCAACTACCTTGCTTCTCCTCCTTTGGTGGTTGCCTATGCTCTTG 2146
Query 2150 CTGGAACGGTGGACATTGATTTTGAGAAAG-AGCCTATAGGAACCAGAAGTGA-TGGAAA 2207
|||| ||||| ||||||| ||||| || | ||||||| || || ||| || ||| ||
Sbjct 2147 CTGGCACGGTTAACATTGACTTTGA-AACGGAGCCTATTGGCACTGGAAA-GAATGGCAA 2204
Query 2208 A-AGTGTGTACCTGAGGGATGTATGGCCAAGCAATGAGGAAGTTGCTCAGGTTGTTCAAT 2266
| ||| | ||| || ||| | ||||||| || || ||| ||||| ||||||||||||
Sbjct 2205 GGA-TGTCTTCCTAAGAGATATCTGGCCAACCACGGAAGAAATTGCTGAGGTTGTTCAAT 2263
Query 2267 ATAGCGTGCTACCA-AGCATGTTCAAGAGCT-CGTACGAAACAATAAC-AGAGGGAAACC 2323
|| || | || | ||||||| |||| | ||||| |||| || | |||| ||||
Sbjct 2264 CCAGTGTTTTGCCTGA-CATGTTCC-GAGCAACATACGAGTCAATCACCA-AGGGTAACC 2320
Query 2324 CCTTGTGGAATGAA-CTCTCTGCACC-GAGT-T-CCACGTTATATTCTTGGGATCCAAAC 2379
|| |||||||| || || |||| || || | || | || || || |||||||| |||
Sbjct 2321 CCATGTGGAAT-AAGCTGTCTGTTCCTGAAAATACC-C-TT-TACTCATGGGATCCCAAC 2376
Query 2380 TCCACGTACATTCATGAACCTCCGTA-TTTCAAGAATATGACCGCAAATCCACCTGGTCC 2438
|| || |||||||| || ||||| || ||| ||| | |||||| |||| || || ||
Sbjct 2377 TCTACTTACATTCACGAGCCTCCATACTTT-AAGGACATGACCATGGATCCTCCAGGGCC 2435
Query 2439 TCGTGAA-GTGAAGGATGCTTACTGCTTGTTGAACTTTGGGGACAGTGTAACAACAGACC 2497
| || ||||||||||||||||| ||| | || |||||||||||| | || || || |
Sbjct 2436 ACAC-AATGTGAAGGATGCTTACTGTTTGCTCAATTTTGGGGACAGTATCACCACTGATC 2494
Query 2498 ACATCTCTCCAGCAGGAAACATTCAAAAA-ACTAGTCCTGCTGCAAAGTTTCTAATGGAC 2556
|||| || ||||| || ||||| ||||| || |||||||||||||||||||| || ||
Sbjct 2495 ACATTTCACCAGCTGGGAACATCCAAAAGGAC-AGTCCTGCTGCAAAGTTTCTCATCGAG 2553
Query 2557 CGTGGTGT-GATTTCGGAAG-ATTTCAACTCATATGGAAGTCGAAG-GGGAAACGACGAG 2613
||||| | || || ||| | |||||||||||||||||||| | ||||| || ||
Sbjct 2554 CGTGGCATTGAC--CGTAAGGACTTCAACTCATATGGAAGTCGCCGTGGGAAT-GATGAA 2610
Query 2614 GTTATGGCTC-GTGGTACATTTGCCAATATCCGTATTGTTAACAAGCTCTTGAAAGGAGA 2672
| ||||| | | || || ||||| ||||||||||| |||||||||||| |||| || ||
Sbjct 2611 ATAATGGC-CAGAGGCACTTTTGCTAATATCCGTATCGTTAACAAGCTCATGAATGGTGA 2669
Query 2673 AGTTGGCCCCAACACTGTTCACATTCCGA-CTGGAGAGAAGCT-T-AGCGTTTTCGATGC 2729
||||||||| || || ||||||||||| | ||||||||||||| | || | ||||||||
Sbjct 2670 AGTTGGCCCTAAGACGGTTCACATTCC-ATCTGGAGAGAAGCTCTCAG--TCTTCGATGC 2726
Query 2730 AGCAAGTAAA-TACAAGACCGCTGAACAGGATACGATCATCCTGGCTGGTGCTGAGTATG 2788
||| | | | |||||| | ||| | || || || || || ||||| ||||| ||||
Sbjct 2727 AGCCA-TGAGGTACAAGTCATCTGGTGAAGACACAATTATTCTTGCTGGAGCTGAATATG 2785
Query 2789 GAAGTGGTAGCTCTCGGGATTGGGCTGCAAAGGGTCCCTTGCTTTTGGGAGTGAAAGCTG 2848
||||||||||||| || ||||||||||| ||||| ||| |||| ||| || ||||| |
Sbjct 2786 GAAGTGGTAGCTCACGTGATTGGGCTGCCAAGGGACCCATGCTACAGGGCGTTAAAGCGG 2845
Query 2849 TAATTGCCAAGAGCTTTGAGAGAATCCATCGCAGCAACCTGGCTGGTA-TGGGGATCATT 2907
| ||||| ||||| |||||||| || || || |||||| ||| ||| | |||| ||||||
Sbjct 2846 TGATTGCAAAGAGTTTTGAGAGGATTCACCGAAGCAACTTGG-TGGGAATGGGAATCATT 2904
Query 2908 CCTCTGTG-TTTCAAGGCTGGGGAGGACGCGGAAACCCTTGGACTCACTGGTCATGAACG 2966
|| ||||| ||| ||| | ||||| || || || || |||||| | |||||||| |||||
Sbjct 2905 CCCCTGTGCTTT-AAGTCCGGGGAAGATGCAGATACTCTTGGATTGACTGGTCACGAACG 2963
Query 2967 CTACACAGTCCACCTTCCTACAAA-AGT-T-AGTGACATTAGACCCGGTCAAGACGTCAC 3023
||||||| || | || || || | | | | || || | ||||| || ||||| || ||
Sbjct 2964 CTACACAATCAATCTCCCAACCGATA-TCTCAGAGATA--AGACCTGGCCAAGATGTTAC 3020
Query 3024 TGTAACCACTGACAGTGGCAAATCCTTTGTCT-GCACCCTGCGTTTTGATACAGAGGTGG 3082
||| || || |||| || ||||| ||| || |||| | || || || ||||||||||
Sbjct 3021 TGTCACTACCGACAACGGGAAATC-TTTCACTTGCACAGTCCGCTTCGACACAGAGGTGG 3079
Query 3083 AATTGGCATACT 3094
||||||||||||
Sbjct 3080 AATTGGCATACT 3091
> Ahg950147 jgi|Araly1|950147|scaffold_802034.1
Length=775
Score = 436 bits (236), Expect = 4e-121
Identities = 383/454 (84%), Gaps = 10/454 (2%)
Strand=Plus/Plus
Query 2632 TTTGCCAATATC-CGTATTGTTAACAAGCTCTTGAAA-GGAGAAGTTGGCCCCAACACTG 2689
||||||| || | || |||| ||||||||||| ||| ||||||||||||||||| || |
Sbjct 162 TTTGCCAGTA-CGTGTCTTGTAAACAAGCTCTT-AAATGGAGAAGTTGGCCCCAAGACAG 219
Query 2690 TTCACATTCCGACTGGAGAGAAGCTTAGCGTTT-TCGATGCAGCAAGTAAATACAAGACC 2748
|||||||||| || |||||||| || || ||| | ||||||||||||| ||||||||||
Sbjct 220 TTCACATTCCTACAGGAGAGAAAATTTGCATTTAT-GATGCAGCAAGTAGATACAAGACC 278
Query 2749 GCTGAACAGGATACGATCATCCTGGCTGGTGCTGAGTATGGAAGTGGTAGCTCTCGGGAT 2808
|||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 279 GCTGGACAGGATACGATCATACTAGCTGGTGCTGAGTATGGAAGTGGTAGCTCTCGGGAT 338
Query 2809 TGGGCTGCAAAGGGTCCCTTGCTTTTGGGAGTGAAAGCTGTAATTGCCAAGAGCTTTGAG 2868
||||||||||||||||| ||||| |||||||||||||| | ||||||||||||||| |
Sbjct 339 TGGGCTGCAAAGGGTCCAATGCTTCTGGGAGTGAAAGCTATCATTGCCAAGAGCTTTAAT 398
Query 2869 AGAATCCATCGCAGCAACCTGGCTGGTATGGGGATCATTCCTCTGTGTTTCAAGGCTGGG 2928
||| |||| ||||||||| ||||| |||| |||| ||||||||||||||||| | ||
Sbjct 399 AGAGTCCACCGCAGCAACTTGGCTAGTATAAGGATTGTTCCTCTGTGTTTCAAGTCCGGT 458
Query 2929 GAGGACGCGGAAACCCTTGGACTCACTGGTCATGAACGCTACACAGTCCACCTTCCTA-C 2987
|| || || |||||||||||||| ||||| ||||||||||||||| |||||||||||| |
Sbjct 459 GAAGATGCAGAAACCCTTGGACTAACTGGCCATGAACGCTACACAATCCACCTTCCTAGC 518
Query 2988 AAAAGTTAGTGACATTAGACCCGGTCAAGACGTCACTGTAACCACTGACAGTGGCAAATC 3047
| || | ||| || | ||| || || ||| | ||||| |||||||||| || | |||
Sbjct 519 GAT-GTCAATGAGATAAAACCAGGCCAGGACATAACTGTGACCACTGACACTG-CTAATT 576
Query 3048 CTTT-GTCTGCACCCTGCGTTTTGATACAGAGGT 3080
|||| |||||||| |||| || || ||||||||
Sbjct 577 CTTTTGTCTGCACTTTGCGGTTAGACACAGAGGT 610
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 126427257506
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5