BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G27270.1 Length=796 Score E Sequences producing significant alignments: (Bits) Value Ahg492071 jgi|Araly1|492071|fgenesh2_kg.7__1504__AT4G27270.1 1099 0.0 > Ahg492071 jgi|Araly1|492071|fgenesh2_kg.7__1504__AT4G27270.1 Length=697 Score = 1099 bits (595), Expect = 0.0 Identities = 663/697 (95%), Gaps = 0/697 (0%) Strand=Plus/Plus Query 10 AAAAATCAGAAAAGCTTTCAGAGGATCGAGCGCACTTCTTCAATGGCGACCAAAGTTTAC 69 |||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct 1 AAAAATCAGAAAAGCTTTGAGAGAATCGAGCGCACTTCTTCAATGGCGACCAAAGTTTAC 60 Query 70 ATAGTGTACTACTCAATGTATGGTCATGTGGAGAAATTAGCTCAAGAGATTAGGAAAGGT 129 || ||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct 61 ATCGTGTACTACTCGATGTACGGCCATGTGGAGAAATTAGCTCAAGAGATTAGGAAAGGT 120 Query 130 GCTGCTTCTGTTGATGGTGTTGAAGCCATACTCTGGCAGGTACCCGAAACGCTCCAAGAA 189 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 121 GCTGCTTCTGTTGATGGTGTTGAAGCCAAACTCTGGCAGGTACCCGAAACGCTCCAAGAA 180 Query 190 GATGTGCTCTCTAAAATGAGTGCACCACCAAAGAGTGATGCTCCTATTATCACCCCAAAC 249 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 181 GATGTGCTCTCTAAAATGAGTGCACCGCCAAAGAGTGATGCTCCTATTATCACCCCAAAC 240 Query 250 GAGCTCGCTGAGGCTGATGGATTTATCTTCGGCTTCCCAACGAGGTTTGGTATGATGGCT 309 ||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| ||| Sbjct 241 GAGCTTGCTGAGGCTGATGGATTTGTCTTCGGCTTCCCAACAAGGTTTGGTATGATAGCT 300 Query 310 GCTCAGTTCAAGGCATTTTTAGATGCGACCGGCGGCCTTTGGAGGACTCAGCAACTCGCC 369 ||||||||||| ||||| || ||||| ||||||||||||||||||||||||||||||||| Sbjct 301 GCTCAGTTCAAAGCATTCTTGGATGCAACCGGCGGCCTTTGGAGGACTCAGCAACTCGCC 360 Query 370 GGTAAACCAGCCGGAATCTTCTACAGCACAGGGTCCCAAGGTGGTGGTCAAGAAACCACC 429 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 361 GGTAAGCCAGCCGGGATCTTCTACAGCACAGGGTCCCAAGGTGGTGGTCAAGAAACAACC 420 Query 430 GCATTAACTGCCATTACTCAGCTGGTTCATCACGGGATGATCTTTGTCCCGATTGGCTAC 489 |||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||| Sbjct 421 GCATTAACTGCCATTACTCAGCTGGTCCATCACGGGATGATATTTGTCCCGATTGGTTAC 480 Query 490 ACATTTGGTGCCGGAATGTTTGAGATGGAAAATGTGAAAGGTGGAAGCCCGTACGGGGCG 549 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct 481 ACATTTGGTGCCGGAATGTTTGAGATGGAGAATGTGAAAGGTGGAAGCCCGTATGGGGCA 540 Query 550 GGAACATTTGCCGGAGATGGGTCGAGACAGCCAACGGAACTGGAGTTGGGGCAAGCATTT 609 ||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||| Sbjct 541 GGAACGTTTGCCGGAGATGGGTCGAGACAGCCAACGGAACTGGAGCTGGAGCAAGCATTT 600 Query 610 CACCAAGGGAAGTACATTGCCGCCATAAGTAAGAAGCTCAAGGGACCTGCTGCTGCTTAG 669 ||||||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||| Sbjct 601 CACCAAGGGAAGTACATAGCCGCCATAAGCAAGAAGCTCAAGGGACCTGCTGCTACTTAG 660 Query 670 AGCTCTCTCAATAAGATAATATTTTGATTCTTTGTTG 706 ||||||||||| |||||||||||||||| | |||||| Sbjct 661 AGCTCTCTCAAAAAGATAATATTTTGATGCCTTGTTG 697 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 29392769007 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5