BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G28370.1
Length=3919
Score E
Sequences producing significant alignments: (Bits) Value
Ahg945197 jgi|Araly1|945197|scaffold_701426.1 2892 0.0
Ahg491936 jgi|Araly1|491936|fgenesh2_kg.7__1369__AT4G28380.1 1814 0.0
Ahg480900 jgi|Araly1|480900|fgenesh2_kg.3__3601__AT2G20650.1 1616 0.0
> Ahg945197 jgi|Araly1|945197|scaffold_701426.1
Length=1727
Score = 2892 bits (1566), Expect = 0.0
Identities = 1676/1730 (97%), Gaps = 3/1730 (0%)
Strand=Plus/Plus
Query 342 TTTTTGGGGGTTGTGAGTGATATGAAGAAGCGGGAACATTTGGGATTAGGGTTCTTCGAG 401
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 1 TTTTTGGGGGTTGTGAGTGATATGAAGAAGCGGGAAAATTTGGGATTAGGG---TTCGAG 57
Query 402 TGGCAGATTATCTTATGGTTATCGATTTGGTTGGCGATTTCGCAACAAGCGCTGGGATTG 461
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 58 TGGCAGGTTATCTTCTGGTTATCGATTTGGTTGGCGATTTCGCAACAAGCGCTGGGATTG 117
Query 462 AGACCTATTAGGGAGAAACCTCGATCATGGAGTGACGAGTGGCTCTTTGGTAGGAAACAA 521
||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 118 AGACCCATAAGGGAGAAAACTCGATCATGGAGTGACGAGTGGCTCTTTGGTAGGAAACAA 177
Query 522 GAAGCTGAAGTTGGACCCTTTTCTGCTTGGAATATAACAGGAACTTATAGAGGAACTTGG 581
||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||||||||
Sbjct 178 GAAGCTGAAGTAGGACCGTTTTCTGCATGGAATATAACAGGAACGTATAGAGGAACTTGG 237
Query 582 AAGTTTCTGAATTCCTTAAATAGCTCTTCGAAGTTTCAAGACTTTCAAAAAGAAAATGGT 641
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct 238 AAGTTTCTGAATTCCGTCAATAGCTCTTCGAAGTTTCAAGACTTTCAAAAAGAAAATGGT 297
Query 642 AATTCTGTGGTTGAGTTAGTAGCAGTTCCAACGAAGATAACTGGTGTGCATTATGTTCAG 701
|||||||||||||||||||| |||||||| || |||||||| ||||||||||||||||||
Sbjct 298 AATTCTGTGGTTGAGTTAGTGGCAGTTCCTACAAAGATAACCGGTGTGCATTATGTTCAG 357
Query 702 GGTGTAGTTGTTTTCCATGACGTATTTGACAATGAACAAAATGTGGGTGGTGCCCAAATA 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 358 GGTGTAGTTGTTTTCCATGACGTATTTGACAATGAACAAAATGTGGGTGGTGCCCAAATA 417
Query 762 AATCTGGAAGGTGTATATATATGGCCCTTTAGACAACTCCGCCTTGTGGCTAACAGCGGC 821
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 418 AATCTGGAAGGTGTATATATATGGCCCTTTAGACAACTCCGCCTTGTGGCTAACAGCGGC 477
Query 822 AAGGAGAGTGATTCAGGGCAAGAAGACAATAATCTTCTCTCAAATCCCTATCATCTGCTT 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 AAGGAGAGTGATTCAGGGCAAGAAGACAATAATCTTCTCTCAAATCCCTATCATCTGCTT 537
Query 882 GGAATTTTCTCCTCTCAAGTGTTTCAAGAATCTCCAAGAGACAGATTACTGAAACGGAAA 941
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 538 GGAATTTTCTCCTCTCAAGTGTTTCAAGAATCTCCAAGAGACAGATTACTGAAACGGAAA 597
Query 942 CTTTCTCCAGTAAATGAGATGGAGAAGCACTGTAATATCGAAATAGCAGCTCAAGTATCC 1001
||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 598 CTTTCTCCAGTAAATGAAATGGAGAAGCACTGTAACATCGAAATAGCAGCTCAAGTATCC 657
Query 1002 CGTGTGGCTTCTAGTGAAAATAATGGAGACAAAAATTATTATCACATGGAAGGATTGATG 1061
|| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 658 CGCGTGGCTTCTGGTGAAAATAATGGAGACAAAAATTATTATCACATGGAAGGATTGATG 717
Query 1062 GAAAGTCCTGGGGTAGGCGATGACGGAGATTGTTTTTCCCCTTTGTTACTGAACGCAACT 1121
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 718 GAAAGTCCTGGGGTAGGCGATGACGGAGATTGTTTTTCCCCTTTGTTACTGAATGCAACT 777
Query 1122 TCTGTAAATGTTGAAGTCTACTATAACAAAGCTGTGAACTATACACTGATGGTCACTTTT 1181
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 778 TCTGTAAATGTCGAAGTCTACTATAACAAAGCTGTGAACTATACACTGATGGTCACTTTT 837
Query 1182 GTCTCTTTCCTCCAGGTTCTTCTGTTGATCCGGCAAATGGAGCACGGTAACACACAATCT 1241
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 838 ATCTCTTTCCTCCAGGTTCTTTTGTTGATCCGGCAAATGGAGCACGGTAACACACAATCT 897
Query 1242 GGTGCTGCTAAGGTATCCATTGTAATGATTGGGCAACAAGCGATCATGGATGCTTATTTG 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 898 GGTGCTGCTAAGGTATCCATTGTAATGATTGGGCAACAAGCGATCATGGATGCTTATTTG 957
Query 1302 TGCCTCTTACATCTAACAGCCGGTATATTAGTCGAATCTCTATTTAATGCATTTGCAACC 1361
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 958 TGCCTCTTACATCTCACAGCCGGTATATTAGTCGAATCTCTGTTTAATGCATTTGCAACC 1017
Query 1362 GCTGCGTTCTTCAAGTTCGTAGTCTTTTCGATTTTTGAGATGAGATATCTTCTGGCTATA 1421
|||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1018 GCTGCGTTCTTCAAATTCGTAGTCTTCTCGATTTTTGAGATGAGATATCTTCTGGCTATA 1077
Query 1422 TGGAAAGCAACCCGTCCTTCCAATAGCGGAGAGGGTTGGGAAACAATGAGGAGAGAACTG 1481
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1078 TGGAAAGCAACCCGTCCTTCCAATAGCGGAGAGGGTTGGGAAACAATGAGGCGAGAACTG 1137
Query 1482 TCCTTTCTGTACAGTCGTTTCTATGGGATCCTTCTTGGAGGCATTTTGATAATGTACCAG 1541
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 TCCTTTCTGTACAGCCGTTTCTATGGGATCCTTCTTGGAGGCATTTTGATAATGTACCAG 1197
Query 1542 TTCCACAACTACATGCAGCCGATTCTCCTTCTCATGTACTCATTTTGGATACCACAAATA 1601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1198 TTCCACAACTACATGCAGCCGATTCTCCTTCTCATGTACTCATTTTGGATACCACAAATA 1257
Query 1602 GTCGCCAATGTTGTCCGGGATTCAAGAAAGCCTCTGCACCCATATTACATCTTGGGCATG 1661
|| |||||||| |||||||||||||||||||||||||| | ||||| ||||||||||||
Sbjct 1258 GTTGCCAATGTCGTCCGGGATTCAAGAAAGCCTCTGCATCTGTATTATATCTTGGGCATG 1317
Query 1662 ACAGCTACACGGTTAGCTATACCGTTATATGTTTTTGGATGCCCACACAACTTCATGCGT 1721
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1318 ACAGCGACACGGTTAGCTATACCGTTATATGTTTTTGGATGCCCACACAACTTCATGCGT 1377
Query 1722 GTAGAGCCCAACAAGGTTTGGTGTATATGCTTGTGCACATTCATGGGGTTGCAAGCCGTC 1781
||||||||||||||||| |||||||||||||||||||||| |||||||| |||||| |||
Sbjct 1378 GTAGAGCCCAACAAGGTCTGGTGTATATGCTTGTGCACATCCATGGGGTCGCAAGCTGTC 1437
Query 1782 ATTCTTCTTCTTCAGCATTATTTTGGTTCACGCTGCTTTGTTCCCCGTCAGATGCTACCA 1841
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1438 ATTCTTCTTCTTCAGCATTATTTTGGTTCACGCTGCTTTGTTCCCCGTCAGATGCTACCA 1497
Query 1842 GAGAAATACAACTACCACCGAAGATTTAATCGGGATGTAAGCCGCACCACTGATTGTGTT 1901
||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||
Sbjct 1498 GAGAAATACAACTACCACCGAAGATTTAATCGGGACGTAAGCCGCAACACTGATTGCGTT 1557
Query 1902 ATCTGCATGACCGCTATTGATCTCAGACAGCATACCAGTGATTGCATGGTAACTCCATGT 1961
||||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct 1558 ATCTGCATGACTGCTATTGATCTCAGACAGCATACCAGTGATTTCATGATAACTCCATGT 1617
Query 1962 GAACATTTCTTTCACTCGGGATGCTTACAGAGATGGATGGATATAAAAATGGAGTGTCCA 2021
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1618 GAGCATTTCTTTCACTCGGGATGCTTACAGAGATGGATGGATATAAAAATGGAGTGTCCA 1677
Query 2022 ACTTGTCGGCGGTCTCTTCCTCCAGCATAGAGGATGTTTTCGGTTTGTTA 2071
||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1678 ACTTGTCGGCGTTCTCTTCCTCCAGCATAGAGGATGTTTTCAATTTGTTA 1727
> Ahg491936 jgi|Araly1|491936|fgenesh2_kg.7__1369__AT4G28380.1
Length=1131
Score = 1814 bits (982), Expect = 0.0
Identities = 1072/1115 (96%), Gaps = 8/1115 (1%)
Strand=Plus/Minus
Query 2353 TTATGTGTCAGCTGGACCAGGAGCAATGGAAGGTCCTGCGGTAGATGGAGCAACCAGTGG 2412
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| ||
Sbjct 1131 TTATGTGTCAGCTGGACCAGGAGCGATGGAAGGTCCTGCGGTAGCTGGAGCAACCAGAGG 1072
Query 2413 AGCCATGGGTGAGCATTCGTGGTCATAGCAGTCTATGGGGTGCTCAAGTACAGCATCACA 2472
|||||||| |||||||| |||||||||||||||||| || ||||||| |||||||||||
Sbjct 1071 AGCCATGGCTGAGCATTTGTGGTCATAGCAGTCTAT--GG-GCTCAAGCACAGCATCACA 1015
Query 2473 GACTTTTTGGGGACGCTGAAGCGGTTTGTCAGGCAGACAGTTGTAGCGATCATCGATGGC 2532
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1014 GACTTTTTGGCTCCGCTGAAGCGGTTTGTCAGGCAGACAGTTGTAGCGATCATCGATGGC 955
Query 2533 TATTCCTCTGGAAGTCAGGTTCCTGCAGATACCTTCTTCTTCACTGAAATAGTTGTAAGA 2592
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 954 TATTCCTCTGGAAGTCAGGTTTCTGCAGATACCTTCTTCTTCACTGAAATAGTTGTAAGA 895
Query 2593 GACGGTAACGTTCAGCAAGCTGGGCAAAACGCAGACTCCAAGAGGGACAGTGCCAGTGAA 2652
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 894 GAGGGTAACGTTCAGCAAGCTGGGCAAAACGCAGACTCCAAGAGGGACAGTGCCAGTGAA 835
Query 2653 CATGTTGTGTTCCAGATTTAGCTGCTCGAGATGGCCTAGCCCAGCGAGACTGTAAGGTAC 2712
|||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 834 CATGTTGTGTTCCAAATTCAGCTGCTCGAGATGGCCTAGCCCGGCGAGACTGTAAGGTAC 775
Query 2713 AGGACCAACTAAACTGTTGTAGCTCATGTCCAGGACTCTTAGCTTGTAGAGATACCCGAC 2772
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 774 AGGACCAACAAAACTGTTGTAGCTCATGTCCAGGACTCTTAGCTTATAGAGATACCCGAC 715
Query 2773 TTCGGGGGGTAGACACCCAGATAAGCTTGAGTTGATTAGGAGAAGCTCTTCTAAGGTATC 2832
||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 714 TTCCGGGGGTAGACACCCAGATAAGCTTGAGTTGACTAGGAGAAGCTCTTCCAAGGTATC 655
Query 2833 TGCAAAGCGGGCTATGGTTGGAGGCAGACAACCGCTAAAATCATTGTTGGCAAAGACGAC 2892
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 654 TGCAAAGCGGGCTATGGTTGGAGGCAGACAACCGCTAAAATCATTGTTGGCAAAGACGAC 595
Query 2893 AACAGAGGCGGTTGTTCCTGTGAAATCTCGGGGGATGAGGCTTGTTAACCGGTTGTTGTT 2952
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 594 AACAGAGGCGGTTGTTCCTGTGAAATCTCTAGGGATGAGGCTTGTTAACCGGTTGTTGTT 535
Query 2953 CACAAAAATGGCATCGAGGGGATTGCTGAAGAGTTTTGGAGGCAAGGGGCCTTCAAACTC 3012
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 534 CACAAAAATGGCATCGAGGGGATTGCTGAAGAGTTTTGGAGGCAAGGGGCCTTCAAACTC 475
Query 3013 ATTGTAACGAAGGTCAAGGTACTTTAGAGAAGGGAGTGCAAGGACGACATCCGGAAAAGG 3072
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 474 ATTGTAACGAAGGTCAAGGTACTTTAGAGAAGGGAGTGCAAGGACGACATCCGGAAAAGG 415
Query 3073 ACCTACAAAGCGGTTGTTGCTGAGGTCAAGTTCATAGAGTAAGGATAGATTGGCAAACGA 3132
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |||||
Sbjct 414 ACCTACAAAGCGGTTGTTGCTGAGGTCAAGCTCATAGAGTAACGATAGATTGGCCAACGA 355
Query 3133 ACGAGGAAGTATGCCACAGAAGCGATTGCTATTGAGATGGATGAGAGCGAGGTCAGAGAG 3192
||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 354 ACGAGGAAGGATGCCACAGAAGCGATTGCTATTGAGATGGATGAGAGCTAGGTCAGAGAG 295
Query 3193 AAGGCCAATGGCTTCAGGCAGGAAACCAGCAATGTCACCATGATTGAGATCGATTCCGGC 3252
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 294 AAGGCCAATGGCTTCAGGCAGGAAACCAGCGATGTCACCATGATTGAGATCGATTCCGGC 235
Query 3253 AACAACTAGAGTGTTTGGATTGGAAGGGGATGGGGCACAGAAGATGCCAGTGTAGCTGCA 3312
||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 234 AACAACTAGAGAGTTTGGATCGGAAGGAGATGGGGCACAGAAGATGCCAGTGTAGCTGCA 175
Query 3313 GACTGAGGGACCGACCCAATCTGCAGTTAAGTTCTTTGGATCAGAATAGATTACCTTCTT 3372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 174 GACTGAGGGACCGACCCAATCTGCAGTTAAGTTCTTTGGATCAGAATAGATTACCTTCTT 115
Query 3373 CCATGCTTTAAGTGCACGGTACGCTTGCTGAAGATGCTGTTTAGGGTTTGTGGAGTGACT 3432
|||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 114 CCATGC-----GTGCACGGTACGCTTGCTGAAGATGCTGTTTAGGGTTTGCGGAGTGACT 60
Query 3433 TGTGTGGTGGTGAAGGCTATGTTTTGCTGTTGATA 3467
||| ||||| ||||||||||| ||||| |||||||
Sbjct 59 TGTATGGTGATGAAGGCTATGCTTTGCGGTTGATA 25
> Ahg480900 jgi|Araly1|480900|fgenesh2_kg.3__3601__AT2G20650.1
Length=2159
Score = 1616 bits (875), Expect = 0.0
Identities = 1392/1643 (85%), Gaps = 30/1643 (2%)
Strand=Plus/Plus
Query 420 TTATCGATTTGGTTGGCGATTTCGCAACAAGC-GCTGGGATTGAGACCTATTAGGGAGAA 478
||| |||||||||| ||| ||| ||||||||| | ||| | ||||| ||||||||||
Sbjct 373 TTAGCGATTTGGTTTGCGGTTTTGCAACAAGCTAAT-GGACTCAGACCCATTAGGGAGAC 431
Query 479 ACCTCGATCATGGAGTGACGAGTGGCTCTTTGGTAGGAAA-CAAGAAGCTGAAGTTGGAC 537
||||||| ||| | || |||||||||||||| | ||| || |||| | || ||||
Sbjct 432 TGCTCGATCCTGGGGCGATGAGTGGCTCTTTGGCAAAAAAGAAAAAAGC-GGAGCAGGAC 490
Query 538 CCTTTTCTGCTTGGAATATAACAGGAACTTATAGAGGAACTTGGAAGTTTCTGA-ATTCC 596
| ||||| || ||||| ||||||||||| |||||||| | ||||| ||||| | | | |
Sbjct 491 CGTTTTCCGCATGGAACATAACAGGAACATATAGAGGCTCATGGAACTTTCT-AGA-TAC 548
Query 597 T-TAAATAGCTCTTCGAAGTTTCAAGACTTTCA-AAAAGAAAATGGTAATTCTGTGGTTG 654
| ||||||||||||| ||||| | ||| ||||| |||||||| |||||| ||||| |||
Sbjct 549 TGTAAATAGCTCTTCAAAGTTCCCAGA-TTTCAGAAAAGAAAGTGGTAACTCTGTCATTG 607
Query 655 AGTTAGTAG-C-AGTTCCAACGAAGATAACTGGTGTGCATTATGTTCAGGGTGTAGTTGT 712
||||||| | | || |||||| || |||||||||||||||||||||||||||| ||||||
Sbjct 608 AGTTAGT-GACAAG-TCCAACAAAAATAACTGGTGTGCATTATGTTCAGGGTGCAGTTGT 665
Query 713 TTTCCATGACGTATTTGACAATGAACAAAATGTGGGTGGTGCCCAAA-TAAATCTGGAAG 771
||||||||||||||||||||||||||| ||||||||||||||||||| |||| | ||||
Sbjct 666 TTTCCATGACGTATTTGACAATGAACACAATGTGGGTGGTGCCCAAATTAAA-GTTGAAG 724
Query 772 GTGTATATATATGGCCCTTTAGACAACTCCGCCTTGTGGCTAACAGCGGCAAGGAGAGTG 831
|||||||||| |||||||||||||| ||||| ||||| |||||||| || ||| || |||
Sbjct 725 GTGTATATATTTGGCCCTTTAGACAGCTCCGTCTTGTTGCTAACAGTGGAAAGAAGGGTG 784
Query 832 ATTCAGGGCAAGAAGACAATAATCTTCTCTCAAATCCCTATCATCTGCTTGGAATTTTCT 891
||||||| | ||||||| || |||||||||| || |||||||||||||| |||||||| |
Sbjct 785 ATTCAGGACTAGAAGACGATTATCTTCTCTCCAACCCCTATCATCTGCTCGGAATTTTTT 844
Query 892 CCTCTCAAGTGTTTCAAGAATCTCCAAGAGACAGATTACTGAAAC-GGAAACTTTCTCCA 950
|||| ||||| |||||||||||||||||||||||| || |||||| | |||| |||||||
Sbjct 845 CCTCCCAAGTATTTCAAGAATCTCCAAGAGACAGAATATTGAAACAGAAAAC-TTCTCCA 903
Query 951 GTAAATGAGATGGAGAAGCACTGTAATATCGAAATAGCAGCTCAAGTATCCCGTGTG-GC 1009
|| ||||||||||||||||||| ||||||||||||||||| ||| |||||| | ||
Sbjct 904 ATATATGAGATGGAGAAGCACTGCAATATCGAAATAGCAGCCCAAATATCCC-AAAGCGC 962
Query 1010 TTCTAGTGAAAATAATGGAGACAAAAATTATTATCACATGGAAGGATTGATGGAAAGTCC 1069
|||||||||||| ||||| |||||| || |||||| || ||||||||||||||||||||
Sbjct 963 TTCTAGTGAAAACAATGGGGACAAAGATCGTTATCATATCGAAGGATTGATGGAAAGTCC 1022
Query 1070 TGGGGTAGGCGATGACGGAGATTGTTTTTCCCCTTTGTTACTGAACGCAACTTCTGTAAA 1129
|| |||| |||||||||||||||||||| || |||| ||||| ||||| || ||||
Sbjct 1023 TGCAGTAGATGATGACGGAGATTGTTTTTCGCCATTGTCGCTGAATGCAACCTCCATAAA 1082
Query 1130 TGTTGAAGTCTACTATAACAAAGCTGTGAACTATACACTGATGGTCACTTTTGTCTCTTT 1189
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||
Sbjct 1083 CGTTGAAGTCTACTATAACAAAGCTGTGAACTATACATTGATGGTCACTTTTGTCTCGTT 1142
Query 1190 CCTCCAGGTTCTTCTGTTGATCCGGCAAATGGAGCACGGTAACACACAATCTGGTGCTGC 1249
||||||||||||| | ||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct 1143 CCTCCAGGTTCTTTTATTGATCCGGCAAATGGAGCACAGTAACACACAATCCGGTGCTGC 1202
Query 1250 TAAGGTATCCATTGTAATGATTGGGCAACAAGCGATCATGGATGCTTATTTGTGCCTCTT 1309
||||| || || |||||||| ||||||||||| ||||||||| ||||||| ||||| ||
Sbjct 1203 AAAGGTCTCTATAGTAATGATCGGGCAACAAGCCATCATGGATTCTTATTTATGCCTTTT 1262
Query 1310 ACATCTAACAGCCGGTATATTAGTCGAATCTCTATTTAATGCATTTGCAACCGCTGCGTT 1369
|||||| ||||| || || ||||| ||||| || ||||| || |||||||| ||||||||
Sbjct 1263 ACATCTCACAGCTGGGATTTTAGTTGAATCCCTTTTTAACGCTTTTGCAACAGCTGCGTT 1322
Query 1370 CTTCAAGTTCGTAGTCTTTTCGATTTTTGAGATGAGATATCTTCTGGCTATATGGAAAGC 1429
|||||| || || || |||||||| ||||||||||||||||||||| | |||||||||||
Sbjct 1323 CTTCAAATTTGTCGTGTTTTCGATATTTGAGATGAGATATCTTCTGTCCATATGGAAAGC 1382
Query 1430 AACCCGTCCTTCCAAT-AGCGGAGAGGGTTGGGAAACAATGAGGAGAGAACTGTCCTTTC 1488
|||||| ||||| || ||||| ||||| ||||||||||||||| | || || |||||||
Sbjct 1383 AACCCGGCCTTC-AACCAGCGGTGAGGGCTGGGAAACAATGAGGCGTGAGCTCTCCTTTC 1441
Query 1489 TGTACAGTCGTTTCTATGGGATCCTTCTTGGAGGCATTTTGATAATGTACCAGTTCCACA 1548
||||||| ||||||||||| ||||||||||||||||| |||||||||||| |||||||||
Sbjct 1442 TGTACAGCCGTTTCTATGGAATCCTTCTTGGAGGCATATTGATAATGTACGAGTTCCACA 1501
Query 1549 ACTACATGCAGCCGATTCTCCTTCTCATGTACTCATTTTGGATACCACAAATAGTCGCCA 1608
||||||||| |||||| ||||| |||||||||||||||||||| || || ||||| || |
Sbjct 1502 ACTACATGCGGCCGATCCTCCTACTCATGTACTCATTTTGGATTCCCCAGATAGTTGCAA 1561
Query 1609 ATGTTGTCCGGGATTCAAGAAAGCCTCTGCACCCATATTACATCTTGGGCATGACAGCTA 1668
| ||||| || ||||| ||||||||||||| || ||||| ||| |||| ||||| | ||
Sbjct 1562 ACGTTGTTCGTGATTCTCGAAAGCCTCTGCATCCTTATTATATCCTGGGGATGACTGTTA 1621
Query 1669 CACGG-TTAGCTATACCGTTATATGTTTTTGGATGCCC-ACACAACTTCATGCGTGTAGA 1726
|||| || |||||||| || ||||||||||| ||||| | | |||||||||||||||||
Sbjct 1622 CACGACTT-GCTATACCATTGTATGTTTTTGGTTGCCCGA-AGAACTTCATGCGTGTAGA 1679
Query 1727 GCCCAACAAGGTTTGGTGTATATGCTTGTGCACATTCATGGGGTTGCAAGCCG-TCATTC 1785
||||| ||||| |||||| || || ||||| ||||||||||||| ||||| | | |||
Sbjct 1680 GCCCAGCAAGGCCTGGTGTGTAAGCCTGTGCGCATTCATGGGGTTTCAAGCTGCTG-TTC 1738
Query 1786 TTCTTCTTCAGCATTATTTTGGTTCACGCTGCTTTGTTCCC-CGTCAGATGCTACCAGAG 1844
|||| |||||||||||||| || || || |||||||| ||| || ||||||| || |||
Sbjct 1739 TTCTACTTCAGCATTATTTCGGGTCTCGTTGCTTTGT-CCCTCGGAAGATGCTCCCTGAG 1797
Query 1845 AAATACAACTACCACCGAAGATTTAATCGGGATGTAAGCCGCACCACTGATTGTGTTATC 1904
||||||| |||| || ||||||| ||| |||||| ||| | || || || || |||
Sbjct 1798 AAATACAGCTACTACAGAAGATTGGATCATAATGTAAACCGAAGCAGGGACTGCGTAATC 1857
Query 1905 TGCATGACCGCTATTGATCTCAGACAGCATACCAGTGATTGCATGGTAACTCCATGTGAA 1964
||||||||| | |||||||||||||| | || | ||||||||||||||| || |||||
Sbjct 1858 TGCATGACCACGATTGATCTCAGACACCGTATTAATGATTGCATGGTAACGCCGTGTGAG 1917
Query 1965 CATTTCTTTCACTCGGGATGCTTACAGAGATGGATGGATATAAAAATGGAGTGTCCAACT 2024
||| | || |||||||| |||||||||||||||||||||||||| |||||||| |||||
Sbjct 1918 CATATATTCCACTCGGGTTGCTTACAGAGATGGATGGATATAAAGATGGAGTGCCCAACA 1977
Query 2025 TGTCGGCGGTCTCTTCCTCCAGC 2047
||||| || | |||||||||||
Sbjct 1978 TGTCGTCGCCCACTTCCTCCAGC 2000
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 148120074116
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5