BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G28620.1 Length=2043 Score E Sequences producing significant alignments: (Bits) Value Ahg491900 jgi|Araly1|491900|fgenesh2_kg.7__1333__AT4G28630.1 2305 0.0 Ahg491901 jgi|Araly1|491901|fgenesh2_kg.7__1334__AT4G28620.1 1664 0.0 > Ahg491900 jgi|Araly1|491900|fgenesh2_kg.7__1333__AT4G28630.1 Length=2107 Score = 2305 bits (1248), Expect = 0.0 Identities = 1633/1821 (90%), Gaps = 18/1821 (1%) Strand=Plus/Plus Query 235 AAAATCAACAGGACGTCGTCGGAGAATATCCTTCGGATGATTTCAAGCTATCTATGGATG 294 |||||||||| ||||||||| | || ||||| || | |||||||||||||||||||||| Sbjct 244 AAAATCAACACGACGTCGTCTCAAAAGATCCTCCGCACGATTTCAAGCTATCTATGGATG 303 Query 295 AAAGACAACCCAAAACTCTGTTTCAGAGTCATCTCTGCTTTTGCGTGTCTCGTGGGAGCT 354 |||||||||||| ||||| | |||||||||||| ||||||| |||||||| | |||||| Sbjct 304 AAAGACAACCCAGAACTCCGATTCAGAGTCATCGCTGCTTTAGCGTGTCTATTAGGAGCT 363 Query 355 AAGTTCTTGAATGTTCAAGTTCCTTTCCTCTTCAAAGTAGCTATAGATTGGCTCTCTTCA 414 |||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||||| Sbjct 364 AAGTTCTTGAATGTTCAATTTCCTTTCCTCTTCAAAGTAGCTATCGATTTACTCTCTTCA 423 Query 415 TCTTCAT------TCGTTGATTCAAACCCTTACCTAGTTGCTGCTTTCGCTACTCCTTCC 468 ||||||| ||| ||||||||| | ||| || |||||||||||||||||||||| Sbjct 424 TCTTCATCAACAATCGCTGATTCAAATCTTTATCTTCTTGCTGCTTTCGCTACTCCTTCT 483 Query 469 TCTGTTCTCATTGGTTATGGCATTGCTCGATCTGGTTCTTCTGCTTTCAACGAGCTTCGT 528 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 484 TCTGTTCTCATTGGTTATGGCATTGCTCGATCTGGATCTTCTGCTTTTAACGAGCTTCGT 543 Query 529 ACTAG-TGTTTTCTCCAAAGTAGCTCTCCGCACCATACGAACCATCTCTAGAAAAGTTCT 587 | | | ||||||||| ||||||||||||||||| |||||| || | ||| | ||||| || Sbjct 544 AGT-GCTGTTTTCTCTAAAGTAGCTCTCCGCACAATACGATCCGTTTCTCGTAAAGTGCT 602 Query 588 CTCGCGTTTACACGATCTCGATCTTCGTTACCATCTAAATAGAGACACAGGTGCTTTGAA 647 ||||| |||||||||||| ||||||||||||||| | ||| |||| ||||| |||||||| Sbjct 603 CTCGCATTTACACGATCTTGATCTTCGTTACCATTTGAATCGAGAAACAGGAGCTTTGAA 662 Query 648 CAGAATCATTGATCGTGGAAGCCGCGCTATAAACACGATTCTCTCAGCTATGGTTTTCAA 707 ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| Sbjct 663 TAGAATCATTGATCGTGGAAGCCGCGCTATTAACACGATCCTCTCAGCTATGGTTTTCAA 722 Query 708 CATTATGCCCACGATCTTGGAGATATCAATGGTCTCATGTATATTAGCATACAAATTTGG 767 || | || ||||||||||||||||| |||||| || |||||||||||||||| ||||| Sbjct 723 TGTTGTTCCAACGATCTTGGAGATATCTATGGTCACAGGTATATTAGCATACAATTTTGG 782 Query 768 AGCTGTTTATGCATTGATTACTTGTCTTTCTGTTGGATCATATATAGCATTCACGTTGGC 827 | |||||| ||| ||||| |||| |||||| ||||||||||| || || ||||| |||| Sbjct 783 ACCTGTTTTTGCTTTGATCACTTCTCTTTCCGTTGGATCATACATTGCTTTCACATTGGT 842 Query 828 TATGACGCAGTGGAGAATC-AAGATTAGAAAAGCTATGAATGAAGCTGAAAACGATGCTA 886 | |||| || ||||||| | ||| ||||| |||||||||| ||||||| || ||||||| Sbjct 843 TGTGACACAATGGAGAA-CTAAGTTTAGATTAGCTATGAATAAAGCTGATAATGATGCTA 901 Query 887 GCACCAGAGCCATTGACTCTCTCATAAACTACGAGACTGTTAAGTATTTCAACAACGAAG 946 |||| ||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||||| Sbjct 902 GCACAAGAGCTATTGATTCTCTTATAAACTACGAGACTGTTAAGTATTTCAATAACGAAG 961 Query 947 ATTACGAAGCTCGAAAGTACGATCAGTTACACGAAA-ATTACGAAGATGCTGCATTGCAA 1005 ||||||||| ||||||||||| | |||| ||||| | || |||||||||||||||| | Sbjct 962 ATTACGAAGGGAGAAAGTACGATGATTTACTCGAAAGA-TATGAAGATGCTGCATTGCGA 1020 Query 1006 AGTCGGAAAAGCT-TTGCCTTATTAAATTTTGGACAGAGTTTTATATTTAGTACAGCTTT 1064 | || |||||| | ||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct 1021 ACTCAGAAAAG-TCTTGCCTTTTTAGATTTTGGACAGAGTTTTATATTTAGTACAGCTTT 1079 Query 1065 GTCAACAGCAATGGTGTTGTGTTCTCAGGGGATTATGAATGGTCAGATGACAGTTGGTGA 1124 ||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 1080 GTCAACATCAATGGTGTTGTGTTCTCAAGGGATTATGAATGGAGAGATGACAGTTGGTGA 1139 Query 1125 TTTGGTGATGGTGAATGGTCTCCTCTTTCAACTGTCTCTTCCTCTTTACTTTCTCGG-GG 1183 ||||||||||||||||||||| ||||||||| |||||||||||||||||||||| || || Sbjct 1140 TTTGGTGATGGTGAATGGTCTTCTCTTTCAATTGTCTCTTCCTCTTTACTTTCTTGGTGG 1199 Query 1184 TTGTTTACAGCGACACCGTTCAGGGACTTGTCGACATGAAATCGATGTTTAAGTTTCTAG 1243 | |||||| |||| ||||||||| | ||| | || |||||||| ||||| |||| |||| Sbjct 1200 T-GTTTACCGCGAAACCGTTCAGAGCCTTATGGATATGAAATCAATGTTCCAGTTGCTAG 1258 Query 1244 AGGAGAGATCTGATATCGGAGATAAAGATATAGACAGGAAGCTCCCTCCTCTTGTTCTGA 1303 |||||||||| ||||||||||||||||||| | | | ||||| |||| ||||||||||| Sbjct 1259 AGGAGAGATCCGATATCGGAGATAAAGATACAAATACAAAGCTTCCTCTTCTTGTTCTGA 1318 Query 1304 AAGGTGGAAGCATTAGTTTTGAGAATGTACATTTTAGTTATCTACCGGAGAGAAAGATTT 1363 |||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 1319 AAGGTGGAAGTATTAGTTTTGAGAATGTACACTTTAGTTATCTACCGGAGAGGAAGATTT 1378 Query 1364 TAGATGGGATTTCATTTGAGGTACCGGCAGGGAAAAGTGTGGCGATTGTCGGTAGTAGCG 1423 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct 1379 TAGATGGGATTTCATTTGAGGTACCGGCGGGGAAAAGTGTGGCGATTGTTGGTAGTAGCG 1438 Query 1424 GAAGCGGAAAATCGACTATTCTTAGAATGATATTCAGGTTCTTTGATGTAGATTCCGGAA 1483 |||||||||||||||| ||||||||||||||||| || |||||||| ||||||||||| Sbjct 1439 GAAGCGGAAAATCGACGATTCTTAGAATGATATTTAGATTCTTTGACACAGATTCCGGAA 1498 Query 1484 ATGTAAAAATTGATGGTCAGGATATAAAGGAAGTGAGACTAGAGAGTCTTAGAAGCTCCA 1543 ||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 1499 ATGTAAAGATTGATGGTCAGGATATAAAGGAAGTGAGATTAGAGAGTCTTCGAAGCTCCA 1558 Query 1544 TTGGAGTTGTCCCTCAAGATACTGTGCTCTTTAACGACACTATATTTCACAACATTCACT 1603 ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||| Sbjct 1559 TTGGAGTTGTCCCTCAAGATACTGTGCTCTTCAATGACACAATATTTCACAACATTCACT 1618 Query 1604 ATGGAAACCTTTCAGCAACAGAGGAAGAGGTGTAC-AATGCAGCTCGACGAGCAGCGATT 1662 ||||||| ||||||||||||||||||||||||||| || |||||||| |||||||||||| Sbjct 1619 ATGGAAATCTTTCAGCAACAGAGGAAGAGGTGTACGAA-GCAGCTCGGCGAGCAGCGATT 1677 Query 1663 CACGATACGATCATGAAATTCCCTGATAAATATTCGACCGCGGTGGGAGAAAGAGGGCTG 1722 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| || Sbjct 1678 CACGATACGATCATGAAATTCCCGGATAAATATAGGACCGCGGTGGGAGAAAGAGGGTTG 1737 Query 1723 ATGCTGAGTGGTGGAGAGAAACAGAGGGTGGCACTTGCTCGTGCATTTCTGAAATCACCA 1782 ||||||||||||||||||||||| || |||||||| |||||||| |||||||||||||| Sbjct 1738 ATGCTGAGTGGTGGAGAGAAACAAAGAGTGGCACTGGCTCGTGCCTTTCTGAAATCACCT 1797 Query 1783 GCAATCCTATTGTGTGACGAAGCAACAAGTGCACTCGACAGTAAAACCGAGGCAGAGATA 1842 |||||||| ||||||||||||||||| ||||| || ||||||||||| |||||||||||| Sbjct 1798 GCAATCCTGTTGTGTGACGAAGCAACGAGTGCGCTTGACAGTAAAACAGAGGCAGAGATA 1857 Query 1843 ATGAAAACGCTGAGGTCGCTAGCGAGTAACAGGACTTGCATTTTCATTGCACATAGACTG 1902 ||||||||||| || ||| ||||||||||||| |||||| | |||||||||||||| ||| Sbjct 1858 ATGAAAACGCTCAGATCGTTAGCGAGTAACAGAACTTGCGTCTTCATTGCACATAGGCTG 1917 Query 1903 ACCACTGCAATGCAATGTGATGAGATATTAGTAATGGAGAAAGGAAAAGTGGTGGAAAAA 1962 |||||||| |||||||||||||| ||| |||||||||||||||| ||||| ||||||||| Sbjct 1918 ACCACTGCGATGCAATGTGATGAAATAATAGTAATGGAGAAAGGGAAAGTAGTGGAAAAA 1977 Query 1963 GGGACACACGAAGTGTTGTTGGGGAAATCTGGCAGATACGCTAAATTATGGACACAACAA 2022 ||||||||| |||||||||||||||||||||| |||||||| || || |||||||||||| Sbjct 1978 GGGACACACCAAGTGTTGTTGGGGAAATCTGGGAGATACGCCAATTTGTGGACACAACAA 2037 Query 2023 AACAGTAAATTGGAGGTGTGA 2043 ||||||||||||||||||||| Sbjct 2038 AACAGTAAATTGGAGGTGTGA 2058 > Ahg491901 jgi|Araly1|491901|fgenesh2_kg.7__1334__AT4G28620.1 Length=2025 Score = 1664 bits (901), Expect = 0.0 Identities = 1127/1230 (92%), Gaps = 39/1230 (3%) Strand=Plus/Plus Query 1 ATGATGAGAGTT-TCTCAACTCCAACTCTGTCGCACTTCTCTTTCGTACCGTCTTCGCTC 59 ||||||||| || || || ||||||||||||| ||||||||| || |||||||||||||| Sbjct 1 ATGATGAGA-TTATCGCAGCTCCAACTCTGTCACACTTCTCTGTCTTACCGTCTTCGCTC 59 Query 60 TGGTTatcatcatcatcatcatcTTCACCACAGTTTCTTCAAGCTCATCAAACGTAACTC 119 ||| | | |||||||||||||| |||| |||||||||| || |||||||||||||||||| Sbjct 60 TGG-T-T-ATCATCATCATCATGTTCATCACAGTTTCTCCAGGCTCATCAAACGTAACTC 116 Query 120 AATTCTTGAATCTCCACCTACT-AATGCATCTCA-TC-AATCTCCATCCCCGATTACTCC 176 ||||||||||||| |||||| | ||||||| | | || || |||||| ||||| ||||| Sbjct 117 AATTCTTGAATCTGCACCTA-TCAATGCATATAACTCTAA--TCCATCTCCGATCACTCC 173 Query 177 TATGGTCAACGCACGCGTCATGTTCTTCTCCACTTCAACTTCAGCTCC--A-C---AT-- 228 ||||||||||||||||| ||||||||||| ||||||||||||||||| | | || Sbjct 174 AATGGTCAACGCACGCGTTATGTTCTTCTCAACTTCAACTTCAGCTCCAAATCAAGATCA 233 Query 229 ------C-C---A---GA-GA--AAATCAACAGGACGTCGTCGGAGAATATCCTTCGGAT 272 | | | || | ||||||||| ||||||||||||||| ||||| || || Sbjct 234 GACCACCTCTAAACCTGATAATCAAATCAACACGACGTCGTCGGAGAAGATCCTCCGCAT 293 Query 273 GATTTCAAGCTATCTATGGATGAAAGACAACCCAAAACT-CTGTTTCAGAGTCATCTCTG 331 |||||||||||| |||||||||||||||||||||||||| | |||||||||||||| ||| Sbjct 294 GATTTCAAGCTACCTATGGATGAAAGACAACCCAAAACTAC-GTTTCAGAGTCATCACTG 352 Query 332 CTTTTGCGTGTCTCGTGGGAGCTAAGTTCTTGAATGTTCAAGTTCCTTTCCTCTTCAAAG 391 |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 353 CTTTAGCGTGTCTCGTGGGAGCCAAGTTCTTGAATGTTCAAGTTCCTTTCCTCTTCAAAG 412 Query 392 TAGCTATAGATTGGCTCTCTTCATCTTCATTCGTTGATTCAAACCCTTACCTAGTTGCTG 451 ||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||| Sbjct 413 TAGCTATAGATTGGCTCTCTTCATCTTCATTTGTTGATTCAAATCCTTTTCTAGTTGCTG 472 Query 452 CTTTCGCTACTCCTTCCTCTGTTCTCATTGGTTATGGCATTGCTCGATCTGGTTCTTCTG 511 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 473 CTTTCGCTACTCCTTCCTCTGTTCTCATTGGTTATGGCATTGCTCGATCTGGATCTTCCG 532 Query 512 CTTTCAACGAGCTTCGTACTAGTGTTTTCTCCAAAGTAGCTCTCCGCACCATACGAACCA 571 |||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 533 CTTTTAACGAGCTTCGTACTAGTGTTTTCTCCAAAGTAGCTCTCCACACCATACGAACCA 592 Query 572 TCTCTAGAAAAGTTCTCTCGCGTTTACACGATCTCGATCTTCGTTACCATC-TAAATAGA 630 ||||||||||||| ||||||||||||||||||||||||||||||||||| | | ||| || Sbjct 593 TCTCTAGAAAAGTGCTCTCGCGTTTACACGATCTCGATCTTCGTTACCA-CTTGAATCGA 651 Query 631 GACACAGGTGCTTTGAACAGAATCATTGATCGTGGAAGCCGCGCTATAAACACGATTCTC 690 || ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 652 GAAACAGGAGCTTTGAACAGAATCATTGATCGTGGTAGCCGCGCTATAAACACGATTCTC 711 Query 691 TCAGCTATGGTTTTCAACATTATGCCCACGATCTTGGAGATATCAATGGTCTCATGTATA 750 ||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || | Sbjct 712 TCAGCTATGGTTTTCAACATTGTTCCCACGATCTTGGAGATATCAATGGTCTCATTTACA 771 Query 751 TTAGCATACAAATTTGGAGCTGTTTATGCATTGATTACTTGTCTTTCTGTTGGATCATAT 810 |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||| Sbjct 772 TTAGCATACAAATTCGGAGTTGTCTATGCATTGATTACTTGTCTTTCTGTTGGATCATAT 831 Query 811 ATAGCATTCACGTTGGCTATGACGCAGTGGAGAATCAAGATTAGAAAAGCTATGAATGAA 870 ||||| ||||| |||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct 832 ATAGCTTTCACATTGGCTTTGACACAGTGGAGAATCAAGATTAGAAAAGCTATGAATGAA 891 Query 871 GCTGAAAACGATGCTAGCACCAGAGCCATTGACTCTCTCATAAACTACGAGACTGTTAAG 930 || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 892 GCCGAAAACGATGCTAGCACAAGAGCCATTGACTCTCTCATAAACTACGAGACTGTTAAG 951 Query 931 TATTTCAACAACGAAGATTACGAAGCTCGAAAGTACGATCAGTTACACGAAAATTACGAA 990 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 952 TATTTCAACAACGAAGATTACGAAGCTCGAAAGTATGATCAGTTACACGAAAATTACGAA 1011 Query 991 GATGCTGCATTGCAAAGTCGGAAAAGCTTTGCCTTATTAAATTTTGGACAGAGTTTTATA 1050 |||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||| Sbjct 1012 GATGCTGCATTGCAAAGTCGGAAAAGTTTTGCCTTGTTAAATTTTGGACAGAGTGTTATA 1071 Query 1051 TTTAGTACAGCTTTGTCAACAGCAATGGTGTTGTGTTCTCAGGGGATTATGAATGGTCAG 1110 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1072 TTTAGCACAGCTTTGTCAACAGCAATGGTGTTGTGTTCTCAAGGGATTATGAATGGTCAG 1131 Query 1111 ATGACAGTTGGTGATTTGGTGATGGTGAATGGTCTCCTCTTTCAACTGTCTCTTCCTCTT 1170 ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| Sbjct 1132 ATGACAGTTGGTGATTTGGTGATGGTGAATGGTCTTCTCTTTCAATTGTCTCTTCCTCTT 1191 Query 1171 TACTTTCTCGGGGTTGTTTACAGCGACACC 1200 || |||||||| |||||||| ||||||||| Sbjct 1192 TATTTTCTCGGTGTTGTTTATAGCGACACC 1221 Score = 1192 bits (645), Expect = 0.0 Identities = 753/806 (93%), Gaps = 4/806 (0%) Strand=Plus/Plus Query 1240 CTAGAGGAGAGATCTGATATCGGAGATAAAGATATAGACAGGAAGCTCCCTCCTCTTGTT 1299 |||||||| ||||| |||||||||||||||||||||||||||||| ||||| |||||||| Sbjct 1222 CTAGAGGAAAGATCCGATATCGGAGATAAAGATATAGACAGGAAGTTCCCTACTCTTGTT 1281 Query 1300 CTGAAAGGTGGAAGCATTAGTTTTGAGAATGTACATTTTAGTTATCTACCGGAGAGAAAG 1359 ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 1282 CTGAAAGGTGGAAGCATTAGTTTTGAGAATGTACACTTTAGTTATCTGCCGGAGAGAAAG 1341 Query 1360 ATTTTAGATGGGATTTCATTTGAGGTACCGGCAGGGAAAAGTGTGGCGATTGTCGGTAGT 1419 |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 1342 ATTTTAGATGGGATTTCATTTGAGGTACCGGCGGGGAAAAGTGTGGCGATTGTTGGTAGT 1401 Query 1420 AGCGGAAGCGGAAAATCGACTATTCTTAGAATGATATTCAGGTTCTTTGATGTAGATTCC 1479 ||||| |||||||||||||| |||||||||||||||||||| |||||||| ||||||| Sbjct 1402 AGCGGGAGCGGAAAATCGACGATTCTTAGAATGATATTCAGATTCTTTGACACAGATTCC 1461 Query 1480 GGAAATGTAAAAATTGATGGTCAGGATATAAAGGAAGTGAGACTAG-AGAGTCTTAGAAG 1538 ||||||||||| |||||||||||| |||||||||||||||| | | |||||||| |||| Sbjct 1462 GGAAATGTAAAGATTGATGGTCAGAATATAAAGGAAGTGAG-TTTGAAGAGTCTTCGAAG 1520 Query 1539 CTCCATTGGAGTTGTCCCTCAAGATACTGTGCTCTTTAACGACACTATATTTCACAACAT 1598 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1521 CTCCATTGGAGTTGTCCCTCAAGATACTGTGCTCTTCAACGACACTATATTTCACAACAT 1580 Query 1599 TCACTATGGAAACCTTTCAGCAACAGAGGAAGAGGTGTACAATGCAGCTCGACGAGCAGC 1658 ||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||| Sbjct 1581 TCACTATGGAAACCTTTCAACAACAGAGGAAGAGGTGTACGATGCAGCTCGGCGAGCAGC 1640 Query 1659 GATTCACGATACGATCATGAAATTCCCTGATAAATATTCGACCGCGGTGGGAGAAAGAGG 1718 ||||||||| | ||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 1641 GATTCACGACATGATCATGAAATTCCCGGATAAATATTCAACCGCGGTGGGAGAAAGAGG 1700 Query 1719 GCTGATGCTGAGTGGTGGAGAGAAACAGAGGGTGGCACTTGCTCGTGCATTTCTGAAATC 1778 |||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||| Sbjct 1701 GCTGATGCTGAGTGGTGGAGAGAAACAGAGAGTAGCACTTGCTCGTGCATTTCTAAAATC 1760 Query 1779 ACCAGCAATCCTATTGTGTGACGAAGCAACAAGTGCACTCGACAGTAAAACCGAGGCAGA 1838 ||||| || | |||||||||||||| || ||||| ||||||||||||||||||||||| Sbjct 1761 ACCAGTGATTATGTTGTGTGACGAAGCGACTAGTGCGCTCGACAGTAAAACCGAGGCAGA 1820 Query 1839 GATAATGAAAACGCTGAGGTCGCTAGCGAGTAACAGGACTTGCATTTTCATTGCACATAG 1898 |||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 1821 GATAATGAAATCGCTGAGGTCGCTAGCGAGTAACAGAAATTGCATTTTCATTGCACATAG 1880 Query 1899 ACTGACCACTGCAATGCAATGTGATGAGAT-ATTAGTAATGGAGAAAGGAAAAGTGGTGG 1957 ||||||||||| |||||||||||||||||| || ||||||||||||||| |||||||||| Sbjct 1881 ACTGACCACTGTAATGCAATGTGATGAGATTAT-AGTAATGGAGAAAGGGAAAGTGGTGG 1939 Query 1958 AAAAAGGGACACACGAAGTGTTGTTGGGGAAATCTGGCAGATACGCTAAATTATGGACAC 2017 ||||||||||||| ||||| ||||||| |||||||| |||||||| ||||||||||||| Sbjct 1940 GAAAAGGGACACACCAAGTGCTGTTGGGAAAATCTGGAAGATACGCCAAATTATGGACAC 1999 Query 2018 AACAAAACAGTAAATTGGAGGTGTGA 2043 |||||||||||||||||||||||||| Sbjct 2000 AACAAAACAGTAAATTGGAGGTGTGA 2025 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76828024165 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5