BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G29690.1 Length=1575 Score E Sequences producing significant alignments: (Bits) Value Ahg491793 jgi|Araly1|491793|fgenesh2_kg.7__1226__AT4G29690.1 2198 0.0 Ahg491792 jgi|Araly1|491792|fgenesh2_kg.7__1225__AT4G29700.1 979 0.0 Ahg945037 jgi|Araly1|945037|scaffold_701266.1 935 0.0 > Ahg491793 jgi|Araly1|491793|fgenesh2_kg.7__1226__AT4G29690.1 Length=1547 Score = 2198 bits (1190), Expect = 0.0 Identities = 1445/1566 (92%), Gaps = 26/1566 (2%) Strand=Plus/Plus Query 16 TCTCTCTCAATGACGAAAAGTAAACCTGGCCGGTCCGGTTTTTCCGGTTACA-TATTGTA 74 |||||||| ||||| ||||||||||||||||||||| ||||||||||||||| | |||| Sbjct 1 TCTCTCTCGATGACTAAAAGTAAACCTGGCCGGTCCTGTTTTTCCGGTTACACCA-TGTA 59 Query 75 CAAGTTATCTCTAACCGTTCTCATTGTCCTC-TCCGTAGCCGTCACTGCCAATGGTTCGG 133 |||||||||||||||||||||||| |||||| | |||||||||||||||| ||||||||| Sbjct 60 CAAGTTATCTCTAACCGTTCTCATCGTCCTCGT-CGTAGCCGTCACTGCCGATGGTTCGG 118 Query 134 ACTCCCCATCT-TCCTACGTC-AGGAGACCCCAACCCCCCAAGAAGCTCAACAAACCGGT 191 |||| | || | ||| ||| | ||||||||||| ||| ||||||| |||||||||||||| Sbjct 119 ACTCTCAAT-TGTCCAACG-CTAGGAGACCCCAGCCCTCCAAGAAACTCAACAAACCGGT 176 Query 192 GGTTCTGTTAATTTCCTGCGATGGTTTCCGGTTCGGTTACCAATTCAAGACAGAGACACC 251 |||||| || ||||||||||| |||||||||||||||||||||||||| ||||||||||| Sbjct 177 GGTTCTATTGATTTCCTGCGACGGTTTCCGGTTCGGTTACCAATTCAAAACAGAGACACC 236 Query 252 AAACATCGATCTGCTCATATCCAGAGGTACCGAAGCTAAGACCGGTTTAATTCCGGTTTT 311 ||||||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||| Sbjct 237 AAACATCGACCTGCTTATATCCAGAGGAACCGAAGCCAAGACCGGTTTAATTCCGGTTTT 296 Query 312 CCCCACCATGACGTTCCCAAACCATTACTCAATCGCTACCGGACTCTATCCGGCTTCCCA 371 |||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||| Sbjct 297 CCCCACCATGACGTTCCCAAACCATTACTCAATCGCCACCGGACTTTACCCGGCTTCCCA 356 Query 372 CGGCATAATCATGAACAAATTTACCGATCCGGTAAGTGGGGAACTATTCAACAGGAACCT 431 ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 357 CGGTATAATCATGAACAAATTTACCGATCCGGTAAGCGGGGAACTATTCAACAGGAACCT 416 Query 432 AAACCCTAAATGGTGGTTAGGTGAGCCGTTGTGGGTGACCGCAGTGAACCAAGGGCTCAT 491 ||||||||||||||||||||||||||| ||||||||||| || |||||||| ||||||| Sbjct 417 AAACCCTAAATGGTGGTTAGGTGAGCCATTGTGGGTGACGGCGGTGAACCAGGGGCTCAA 476 Query 492 GGCTGCGACTTACTTTTGGCCAGGCGCTGACGTCCACAAAGGGTCTTGGAACTGCCCAAA 551 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 477 GGCTGCGACTTACTTTTGGCCAGGCGCTGACGTCCACAAAGGCTCTTGGAACTGCCCAAA 536 Query 552 AGGCTTTTGTAAAGCTCCTTACAATGTTTCAGTTCCTTTAGAAGAAAGAGTCGATACGAT 611 ||| ||||| |||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct 537 AGGATTTTGCAAAGCTCCTTACAATGTTTCGGTTCCTCTAGAAGAAAGAGTCGATACGAT 596 Query 612 CTTGAACTATTTCGATCTTCCAGAGAGAGAAATCCCTGATTTCATGGCTCTGTATTTCGA 671 ||||||||||||||||||||||| || |||||||| ||||||||||||||||||||||| Sbjct 597 TTTGAACTATTTCGATCTTCCAGAAAGCGAAATCCCCGATTTCATGGCTCTGTATTTCGA 656 Query 672 TGAACCGGACATACAAGGCCATGAGTACGGCCCTGATGATCCTCGCGTCACGGAAGCCGT 731 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 657 TGAACCGGACATACAAGGCCATGAGTACGGCCCTGATGATCCTCGCGTCACAGAAGCGGT 716 Query 732 CTCAAAGGTCGATAAAATGATCGGTAGGATCATCATG-GGATTGGAGAAGAGGAAGGTTT 790 ||||||||||||||| ||||||||||||||||| | | || ||| ||||||| ||||||| Sbjct 717 CTCAAAGGTCGATAATATGATCGGTAGGATCAT-ACGAGGGTTGAAGAAGAGAAAGGTTT 775 Query 791 TTAGTGATGTTCATGTGATATTGCTTGGTGATCACGGAATGGTTACTAACTGTGACAAGA 850 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 776 TTAGTGATGTTCATGTGATATTGCTTGGTGATCACGGAATGGTTACTAACTGTGACAAGA 835 Query 851 AAGTGATTTACATTGATGATTTAGCCGATTGGATCAAGATACCCGCGGATTGGATCCAAG 910 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 836 AAGTGATTTACATTGATGATTTAGCGGATTGGATCAAGATACCCGCGGATTGGATCCAAG 895 Query 911 ATTATAGTCCGGTGCTAGCGATGAATCCGCGCTGGGGCAAAGATGTCAAGAATCCAGGAC 970 ||||||| || |||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 896 ATTATAGCCCCGTGCTAGCGATGAATCCGCGGTGGGGCAAAGATGTCAAGAATCCAGG-C 954 Query 971 -AGAAGAATGCAGAACTCGTAAG-GAAGATGAACGAAGCTTTGAGCTCAGGGAAAGTAGC 1028 |||||||||| ||||| || | |||||||||||||||||||||||||||||||||||| Sbjct 955 GAGAAGAATGCGGAACTTGTG-GCGAAGATGAACGAAGCTTTGAGCTCAGGGAAAGTAGC 1013 Query 1029 CAACGGAGAGTTTTTGCAGGTTTACTTGAAGGAGAATTTACCGCAAAGGCTGCATTATTC 1088 ||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 1014 CAACGGAGAGTTTTTACAGGTATACTTGAAGGAGAATTTACCGCAAAGGCTACATTATTC 1073 Query 1089 CGATAGTTCTCGGATTCCACCGATCATCGGAATGGTGGGAGAAGGTCTAATGGTTAAACA 1148 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1074 CGATAGCTCTCGGATTCCACCGATCATCGGAATGGTGGGAGAAGGTCTAATGGTTAAACA 1133 Query 1149 GAACAGAACATACGTTCAAGAATGTTCTGGAACTCATGGATACGATAATATGTTCTTTTC 1208 |||||||||| |||||||||||||||| |||| |||||||||||| || ||||||||||| Sbjct 1134 GAACAGAACAAACGTTCAAGAATGTTCCGGAAATCATGGATACGACAACATGTTCTTTTC 1193 Query 1209 TATGAGATCAATCTTTGTTGGATATGGTCCAAGGTTTAGGAGAGGAATAAAAGTGCCATC 1268 |||||||| |||||| ||||||||||||||||||||||||| |||| |||||||| || Sbjct 1194 CATGAGATCCATCTTTATTGGATATGGTCCAAGGTTTAGGAGTGGAAGGAAAGTGCCGTC 1253 Query 1269 GTTCGAGAATGTTCAGGTCTATAATGCTGTTGCAGAGATTCTCGGACTCCGACCAGCTCC 1328 ||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1254 GTTTGAAAATGTTCAGGTCTATAATGCTGTTACAGAGATTCTCGGACTCCGACCAGCTCC 1313 Query 1329 GAACAACGGTTCTTCTTTGTTTACTCGTAGTCTTCTCTTGCCATTTGGAGAAACATCACA 1388 ||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||| || Sbjct 1314 GAACAACGGGTCTTCTTTGTTTACTCGTAGCCTTCTCTTGCCCTTTGGAGAAACATCGCA 1373 Query 1389 AGTAGAATGAAGCTAAACAATAATCTAAGTTTGTTGCAGTATGGCGTTTACTTTCGGATG 1448 ||||||||||||||||| || || ||||||||||| ||||||||| |||| ||||||||| Sbjct 1374 AGTAGAATGAAGCTAAATAAAAACCTAAGTTTGTTTCAGTATGGCTTTTAGTTTCGGATG 1433 Query 1449 CATTTTGAAGTTTTAGGCTTTTAGCTCTAAATCAATGGTGTATCAACAAATAATATGTTA 1508 |||||| || | | ||| ||||||||||||||| | ||||||| ||||| ||||| Sbjct 1434 CATTTT-AA-T----G--TTTCAGCTCTAAATCAATG-T--ATCAACACATAATGTGTTA 1482 Query 1509 TGAAAATAATTTTGTTAGTATAAGAATAATGTGCAAGATACTTAAATAGACCTAAATTAT 1568 || || |||||||| |||||||||| ||| || | | | ||||||||||||||||||| Sbjct 1483 TGGAA-TAATTTTGCTAGTATAAGACTAAAGTTTTACAAAGTTAAATAGACCTAAATTAT 1541 Query 1569 TTGAAT 1574 |||||| Sbjct 1542 TTGAAT 1547 > Ahg491792 jgi|Araly1|491792|fgenesh2_kg.7__1225__AT4G29700.1 Length=1435 Score = 979 bits (530), Expect = 0.0 Identities = 1016/1244 (82%), Gaps = 59/1244 (5%) Strand=Plus/Plus Query 171 CAAGAAGCTCAACAAACCGGTGGTTCTGTTAATTTCCTGCGATGGTTTCCGGTTCGGTTA 230 ||||||||| ||||||||||||||| | | ||||| || || ||||||||||| ||||| Sbjct 153 CAAGAAGCTTAACAAACCGGTGGTTTTAATGATTTCTTGTGACGGTTTCCGGTTTGGTTA 212 Query 231 CCAATTCAAGACAGAGACACCAAACATCGATCTGCTCATATCCAGAGGTACCGAAGCTAA 290 |||||| || || || |||||||||||||| || ||||||||| |||| ||||| || || Sbjct 213 CCAATTTAAAACGGAAACACCAAACATCGACCTTCTCATATCCGGAGGAACCGAGGCCAA 272 Query 291 GAC-CGGTTTAATTCCGGTTTTCCCCACCATGACGTTCCCAAACCATTACTCAATCGCTA 349 || ||||||||| |||||||||||||||||||| ||||||||||| ||||| ||||| | Sbjct 273 -ACACGGTTTAATCCCGGTTTTCCCCACCATGACATTCCCAAACCACTACTCTATCGCAA 331 Query 350 CCGGACTCTATCCGGCTTCCCACGGCATAATCATGAACAAATTTACCGATCCGG-TAAGT 408 |||||||||| ||||||| |||||| |||||||||||||| ||||||||||||| || | Sbjct 332 CCGGACTCTACCCGGCTTACCACGGTATAATCATGAACAAGTTTACCGATCCGGTTACG- 390 Query 409 GGGGAACTATTCAAC--AGGAACCTA-AACCCTAAATGGTGGTTAGGTGAGCCGTTGTGG 465 || || | |||||| ||| | || || || ||||||||||||||||||||| ||||| Sbjct 391 GGAGAGGTGTTCAACAAAGG--CTTACAA-CCGAAATGGTGGTTAGGTGAGCCGCTGTGG 447 Query 466 GTGACCGCAGTGAACCAAGGGCTCATGGCTGCGACTTACTTTTGGCCAGGCGCTGACG-T 524 || ||||||| |||||||| |||| ||||| ||||||||||||||||||| |||| | | Sbjct 448 GTAACCGCAGCAAACCAAGGTCTCAAGGCTGTGACTTACTTTTGGCCAGGCTCTGAAGTT 507 Query 525 CCACAAAGGGTCTTGGAAC-TGCCCAAAAGGCTTTTGTAAAGCTCCTTACAATGTTTCAG 583 || |||||| |||||| || ||||| |||| | |||| | | || |||| |||| | Sbjct 508 CC-CAAAGGTTCTTGG-ACTTGCCCTGAAGGATATTGT---CCACGTTTCAATCTTTC-G 561 Query 584 -TTCCTTTAGAAGAAAGAGTCGATACGATCTTGAACTATTTCGATCTTCCAGAGAGA-GA 641 |||||||||||||||| || ||| || |||||| | |||| |||| || ||| || || Sbjct 562 ATTCCTTTAGAAGAAAGGGTTGATTCGGTCTTGAGCCATTTTGATCACCCTGAG-GACGA 620 Query 642 AATCCCTGATTT-CATGGCT-CTGTATTTCGATGAACCGGA-C-ATACAAGGCCATGAGT 697 ||| |||||||| | | | | |||| |||||||| | || | || | || ||| | | Sbjct 621 AATTCCTGATTTGC-T-GATGTTGTACTTCGATGAGTCAGACCAAT-C-GGGTCATAACT 676 Query 698 ACGGCCCTGATGATCCTCGCGTCACGGA-AGCCGTCTCAAAGGTCGATAAAATGATCGGT 756 | || ||||||||| |||| || || || || || || | ||| ||||| ||||| ||| Sbjct 677 ATGGTCCTGATGATGCTCGGGTTAC-GACTGCGGTTTCGAGGGTAGATAACATGATTGGT 735 Query 757 AGGATCAT-CATGGGATTGGAGAAGAGGAAGGT-TTTTAGTGATGTTCATGTGATATTGC 814 ||| | || | ||| || |||||||| || | ||| | ||| |||||||||||||||| Sbjct 736 AGGGTGATAAACGGGCTT-AAGAAGAGGTAGATCTTTGA-TGAGGTTCATGTGATATTGC 793 Query 815 TTGGTGATCACGGAATGGTTACTAACTGTGAC---AA-GA-AA-GTGATTTACATTGATG 868 ||||||||||||||||||| || |||||||| || || || | |||||||||||||| Sbjct 794 TTGGTGATCACGGAATGGTGACCAACTGTGAATGTAACGAGAAAGCGATTTACATTGATG 853 Query 869 ATTTAGCCGATTGGATCAAGATACCCGCGGATTGGATCCAAGATTATAGTCCGGTGCTAG 928 | ||||| ||||||||||||||||| |||| ||||||||| | ||| || || || |||| Sbjct 854 ACTTAGCGGATTGGATCAAGATACCTGCGGCTTGGATCCAGGCTTACAGCCCAGTTCTAG 913 Query 929 CGATGAATCCGC-GCTGGGGCAAAGATGTCAAGAATCCAGGAC-AGAAGAATGCAGAACT 986 | || ||||| | | ||||||||| ||||| |||||| || || | ||||| || ||| | Sbjct 914 CAATTAATCCTCAG-TGGGGCAAAAATGTCGAGAATCAAG-ACGAAAAGAACGCGGAAGT 971 Query 987 CGTAAGG-AA-GATGAACGAAGCTTTGAGCTCAGGGAAAGTAGCCAACGGAGAGTTTTTG 1044 || || || ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 972 AGT--GGCAAAGATGAACGAAGCTTTGAGCTCAGGGAAAGTAAAAAACGGAGAGTTTTTG 1029 Query 1045 CAGGTTTACTTGAAGGAGAATTTACCGCAAAGGCTGCATTATTCCGATAGTTCTCGGATT 1104 ||||||||||||||||||| |||||| |||| |||||||||||||| |||||||||||| Sbjct 1030 AAGGTTTACTTGAAGGAGAAGTTACCGGAAAGACTGCATTATTCCGAGAGTTCTCGGATT 1089 Query 1105 CCACCGATCATCGGAATGGTGGGAGAAGGTCTAATGGTTAAACAGAACAGAACATACGTT 1164 ||||||||||| |||||||| |||||||||||||| || | ||||||||||||| | | | Sbjct 1090 CCACCGATCATTGGAATGGTCGGAGAAGGTCTAATTGTCAGACAGAACAGAACAAATGCT 1149 Query 1165 CAAGAATGTTCTGGA-ACTCATGGATACGATAAT-ATGTTCTTTTCTATGAGATCAATCT 1222 |||| || | |||| || ||||| ||||| || | | |||| || ||||| || || | Sbjct 1150 CAAGTTTGCTATGGAGAC-CATGGTTACGACAACGA-GCTCTTCTCGATGAGGTCTATTT 1207 Query 1223 TTGTTGGATATGGTCCAAGGTTTAGGAGAGG-AATAAAAGTGCCATCGTTCGAGAATGTT 1281 |||| ||| ||||| | |||||||| ||||| || |||||||||||| ||||||||||| Sbjct 1208 TTGTCGGACATGGTTCTAGGTTTAGTAGAGGGAA-AAAAGTGCCATCCTTCGAGAATGTG 1266 Query 1282 CAGGTCTATAATG-CTGTTGCAGAGATTCTCGGACTCCGACCAGCTCCGAACAACGGTTC 1340 ||| ||||||| | | ||||||||| |||| ||||||||||||||||||||||| ||||| Sbjct 1267 CAGATCTATAACGTC-GTTGCAGAGCTTCTTGGACTCCGACCAGCTCCGAACAATGGTTC 1325 Query 1341 TTCTTTGTTTACTCGTAGTC-TTCTCTTGCCATTTGGAGAAACA 1383 ||||||||| |||| || | |||||||||| ||||||| |||| Sbjct 1326 TTCTTTGTTCCCTCGGAG-CATTCTCTTGCCTTTTGGAGCAACA 1368 > Ahg945037 jgi|Araly1|945037|scaffold_701266.1 Length=1427 Score = 935 bits (506), Expect = 0.0 Identities = 1013/1249 (81%), Gaps = 69/1249 (6%) Strand=Plus/Plus Query 171 CAAGAAGCTCAACAAACCGGTGGTTCTGTTAATTTCCTGCGATGGTTTCCGGTTCGGTTA 230 ||||||||||||||||||||||||| | | ||||||||||| |||||||| |||||||| Sbjct 168 CAAGAAGCTCAACAAACCGGTGGTTTTAATGATTTCCTGCGACGGTTTCCGTTTCGGTTA 227 Query 231 CCAATTCAAGACAGAGACACCAAACATCGATCTGCTCATATCCAGAGGTACCGAAGCTAA 290 |||||| || || || |||||||| ||||| || ||||||||| |||| ||||| || || Sbjct 228 CCAATTTAAAACCGACACACCAAATATCGACCTTCTCATATCCGGAGGAACCGAGGCCAA 287 Query 291 GACCGGTTTAATTCCGGTTTTCCCCACCATGACGTTCCCAAACCATTACTCAATCGCTAC 350 | ||||||||| |||||||||||||||||||||||||||||||| ||||| ||||| || Sbjct 288 AAGCGGTTTAATCCCGGTTTTCCCCACCATGACGTTCCCAAACCACTACTCTATCGCCAC 347 Query 351 CGGACTCTATCCGGCTTCCCACGGCATAATCATGAACAAATTTACCGATCCGGTAAGTGG 410 ||||||||| ||||||| |||||| ||||||||||||| |||||||||||||| | ||| Sbjct 348 CGGACTCTACCCGGCTTACCACGGTATAATCATGAACACGTTTACCGATCCGGTTACTGG 407 Query 411 GGAACTATTCAACAGGAAC-CT-A-AACCCTAAATGGTGGTTAGGTGAGCCGTTGTGGGT 467 || | ||||||| || || | |||| |||||||||||||||||||| ||||||| Sbjct 408 AGATGTGTTCAACA--AAGGCTTACAACCA-AAATGGTGGTTAGGTGAGCCAATGTGGGT 464 Query 468 GACCGCAGTGAACCAAGGGCTCATGGCTGCGACTTACTTTTGGCCAGGCGCTGACGT-CC 526 |||||||| |||||||| |||| ||||| ||||||||||||||||||| |||| || || Sbjct 465 AACCGCAGTAAACCAAGGTCTCAAGGCTGTGACTTACTTTTGGCCAGGCTCTGAAGTTCC 524 Query 527 ACAAAGGGTCTTGGAACT-GCCCAAAAGGCTTTTGTAAA-GCTCCTTACAATGTTTCAGT 584 |||||| ||||||| || |||| ||||| | ||| | | | || |||| ||| || Sbjct 525 -CAAAGGTTCTTGGA-CTTGCCCTAAAGGATACTGTCCACG-T--TT-CAATAATTCGGT 578 Query 585 TCCTTTAGAAGAAAGAGTCGATACGATCTTGAACTATTTCGATCTTCCAGAGAGA-GAAA 643 ||||||||||||||| |||||| || |||||| | ||||||||| || ||| || |||| Sbjct 579 TCCTTTAGAAGAAAGGGTCGATTCGGTCTTGAGCCATTTCGATCAGCCTGAG-GACGAAA 637 Query 644 TCCCTGATTT-CATGGCTCTG-TATTTCGATGAACCGGACATA-CAAGGCCATGAGTACG 700 | |||||||| | || | | |||||| |||| ||||||| | || || ||| | || | Sbjct 638 TTCCTGATTTGC-TGA-TGTTATATTTCAATGAGCCGGACAAAGCA-GGTCATAAATATG 694 Query 701 GCCCTGATGATCCTCG-CGTCACGGAA-GCCGTCTCAAAGG-TCGATAAAATGATCGGTA 757 | ||||| |||||||| | | || || || || || | || | ||||||||||| |||| Sbjct 695 GTCCTGACGATCCTCGGCTT-ACA-AATGCGGTTTCGA-GGATTGATAAAATGATTGGTA 751 Query 758 GGATCATCATGGGA-TTGGAGAAGAG-GAAGGTTTTT-AGTGATGTTCATGTGATATTGC 814 || | || | ||| || ||||||| || | | ||| | ||| || ||||||||| ||| Sbjct 752 GGGTGATAAAGGGGCTTA-AGAAGAGAGA-GATCTTTGA-TGAGGTGCATGTGATACTGC 808 Query 815 TTGGTGATCACGGAATGGTTACTAACTGTGAC---AA-GA-AA-GTGATTTACATTGATG 868 ||||||||||||||||||| || |||||||| || || || | |||||| ||||||| Sbjct 809 TTGGTGATCACGGAATGGTGACCAACTGTGAATGTAACGAGAAAGCGATTTATATTGATG 868 Query 869 ATTTAGCCGATTGGATCAAGATACCCGCGGATTGGATCCAAGATTATAGTCCGGTGCTAG 928 | || || ||||||||||||||||| |||| ||||||||||| ||| || || ||||||| Sbjct 869 ACTTGGCGGATTGGATCAAGATACCTGCGGCTTGGATCCAAGCTTACAGCCCAGTGCTAG 928 Query 929 CGATGAATCCGCGCTGGGGCAAAGATGTCAAGAATCCA-G-GACAGAAGAATGC-AGAAC 985 | || ||||| | ||||||||| ||||| |||||| | | || | ||||| || | || Sbjct 929 CAATTAATCCACAATGGGGCAAAAATGTCGAGAATCAAAGCGA-A-AAGAACGCCA-AAG 985 Query 986 TCGTAAGG-AA-GATGAACGAAGCTTTGAGCTCAGGGAAAGTAGCCAACGGAGAGTTT-T 1042 |||| || || ||||||||||||||||||||||||| ||||| |||||||| ||| | Sbjct 986 TCGT--GGCAAAGATGAACGAAGCTTTGAGCTCAGGGGAAGTAAAAAACGGAGA-TTTAT 1042 Query 1043 TGCAGGTTTACTTGAAGGAGAATTTACCGCAAAGGCTGCATTATTCCGATAGTTCTCGGA 1102 || ||||||||||||||||||| |||||| |||| |||||||||||||| || | ||||| Sbjct 1043 TGAAGGTTTACTTGAAGGAGAAGTTACCGGAAAGACTGCATTATTCCGAGAGCTATCGGA 1102 Query 1103 TTCCACCGATCATCGGAATGGTGGGAGAAGGTCTAATGGTTAAACAGAACAGAACATACG 1162 ||||||| ||||| ||||| || ||||||||||||||||| | |||||| |||||| | Sbjct 1103 TTCCACCAATCATAGGAATAGTCGGAGAAGGTCTAATGGTCAGACAGAATAGAACAAAT- 1161 Query 1163 T-TCAAGAATGTT-CTGGA-ACTCATGGATACGATAATATGTTCTTTTCTATGAG-ATCA 1218 | |||| |||| | | ||| || ||||| | ||| || | |||||| || ||||| | | Sbjct 1162 TCTCAAAAATGCTAC-GGAGAC-CATGGTTTCGACAACAAGTTCTTCTCAATGAGGA-CT 1218 Query 1219 ATCTTTGTTGGATATGGTCCAAGGTTTAGGAGAGGAATA-AAAGTGCCATCGTTCGAGAA 1277 || ||||| ||| ||||| | |||||||||||||||| | |||||||||||||| ||||| Sbjct 1219 ATTTTTGTCGGACATGGTTCTAGGTTTAGGAGAGGAA-AGAAAGTGCCATCGTTTGAGAA 1277 Query 1278 TGTTCAGGTCTATAATG-CTGTTGCAGAGATTCTCGGACTCCGACCAGCTCCGAACAACG 1336 ||| || |||||| | | |||||||| ||||| ||||||||||||||||||||||| | Sbjct 1278 TGTGGAGATCTATAGCGTC-GTTGCAGATATTCTTGGACTCCGACCAGCTCCGAACAATG 1336 Query 1337 GTTCTTCTTTGTTTACTCGTAGTC-TTCTCTTGCCATTT-GGAGAAACA 1383 ||||||||||||| |||| || | |||||||||| || |||| |||| Sbjct 1337 GTTCTTCTTTGTTCCCTCGGAG-CATTCTCTTGCC-TTCCGGAGCAACA 1383 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 59001789505 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5