BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G30110.1
Length=2875
Score E
Sequences producing significant alignments: (Bits) Value
Ahg889111 jgi|Araly1|889111|Al_scaffold_0007_1097 3707 0.0
Ahg480822 jgi|Araly1|480822|fgenesh2_kg.3__3523__AT2G19110.1 1681 0.0
Ahg473917 jgi|Araly1|473917|fgenesh2_kg.1__3871__AT2G19110.1 1297 0.0
> Ahg889111 jgi|Araly1|889111|Al_scaffold_0007_1097
Length=2835
Score = 3707 bits (2007), Expect = 0.0
Identities = 2328/2483 (94%), Gaps = 22/2483 (1%)
Strand=Plus/Plus
Query 8 ATGGCGTCGAAGAAGATGACCAAGAGTTACTTCGATGTTCTTGGAATTTGCTGTACATCG 67
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGGCGTCGAAGAAGATGACCAAGAGTTACTTCGATGTTCTTGGAATTTGCTGTACATCG 60
Query 68 GAGGTTCCGTTGATCGAGAATATTCTCAATTCCATGGACGGTGTTAAAGAATTCTCTGTT 127
|||||||||||||| ||||| |||||||| |||||||||||||||||||||| |||||||
Sbjct 61 GAGGTTCCGTTGATTGAGAACATTCTCAAATCCATGGACGGTGTTAAAGAATACTCTGTT 120
Query 128 ATTGTTCCGTCAAGAACCGTCATCGTCGTCCACGACACTCTCATCCTCTCGCAGTTCCAA 187
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 121 ATTGTTCCGTCAAGAACCGTCATCGTCGTCCACGACACTCTCATCCTCTCCCAGTTCCAA 180
Query 188 ATCGTTAAAGCACTGAACCAAGCACAGTTAGAAGCAAATGTGAGGGTAACCGGAGAAACC 247
||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 181 ATCGTGAAAGCACTGAACCAAGCACGGTTAGAAGCAAATGTGAGGGTAACCGGAGAAACA 240
Query 248 AATTTCAAGAATAAATGGCCAAGTCCCTTTGCGGTGGTTTCCGGCATACTTCTCCTCCTC 307
||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 241 AATTTCAGGAATAAATGGCCAAGTCCCTTTGCGATGGTTTCCGGCCTACTTCTCCTCCTC 300
Query 308 TCCTTCTTCAAATACCTTTACTCTCCCTTCCGTTGGCTCGCTGTCGCAGCCGTTGTCGCT 367
|||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 301 TCCTTCTTCAAATACCTTTACTCTCCGTTCCGTTGGCTCGCTGTCGCAGCCGTCGTCGCC 360
Query 368 GGCATTTATCCGATATTAGCCAAAGCTGTAGCATCTCTTGCAAGGTTTAGAATCGACATC 427
|| |||||||| ||| | ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 361 GGAATTTATCCAATACTGGCCAAAGCTGTAGCATCCCTTGCAAGGTTTAGAATCGACATC 420
Query 428 AACATTCTTGTTGTTGTAACCGTGGGAGCAACAATTGGCATGCA-AGATTACACAGAAGC 486
|||||||||||| || |||| || |||||||||||||| ||| | |||||||||||||||
Sbjct 421 AACATTCTTGTTATTATAACTGTTGGAGCAACAATTGGTATG-AGAGATTACACAGAAGC 479
Query 487 TGCAGTAGTTGTCTTCTTGTTCACAATCGCTGAATGGCTCCAATCTAGAGCTAGCTATAA 546
|| ||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||
Sbjct 480 TGGAGTAGTTGTCTTCTTATTCACAATCGCTGAATGGCTCCAGTCAAGAGCTAGCTATAA 539
Query 547 GGCAAGTGCAGTGATGCAGTCTTTGATGAGTTTAGCTCCACAAAAGGCCGTGATTGCAGA 606
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 540 GGCAAGTGCAGTGATGCAGTCTTTGATGAGTTTAGCTCCACAAAAGGCAATGATTGCAGA 599
Query 607 GACTGGAGAAGAAGTTGAAGTGGATGAACTCAAGA-CTAACACAGTTATAGCTGTCAAAG 665
||||||||||||||| |||||||||| ||||||| | ||||||||||||||||||||||
Sbjct 600 AACTGGAGAAGAAGTTCAAGTGGATGAGCTCAAGATC-AACACAGTTATAGCTGTCAAAG 658
Query 666 CTGGTGAAACCATACCAATTGATGGAGTTGTTGTTGATGGAAACTGTGAAGTTGATGAGA 725
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 659 CTGGTGAAACCATACCAATTGATGGAGTTGTTGTGGATGGAAACTGTGAAGTTGATGAGA 718
Query 726 AAACTTTGACCGGTGAAGCATTCCCCGTGCCTAAACTGAAAGATTCGACGGTTTGGGCTG 785
|||| |||||||||||||||||||||||||||||||| | |||||| ||||||||||||
Sbjct 719 AAACCTTGACCGGTGAAGCATTCCCCGTGCCTAAACTCAGAGATTCTTCGGTTTGGGCTG 778
Query 786 GAACCATCAATCTAAATGGTTACATAACTGTGAACACCACTGCTCTAGCTGAGGATTGCG 845
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct 779 GAACCATCAATCTAAATGGTTACATAAGTGTGAAAACCACTGCTCTAGCTGAGGATTGCG 838
Query 846 TGGTTGCGAAGATGGCAAAACTTGTAGAAGAAGCTCAGAACAGCAAAACCGAAACTCAGA 905
||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||
Sbjct 839 TGGTTGCGAAGATGGCAAAGCTTGTCGAAGAAGCTCAGAACAGCAAAACTGAAACTCAGA 898
Query 906 GATTTATAGATAAATGTTCCAAGTACTATACTCCAGCGATCATCCTGATATCAATCTGTT 965
|||||||||| |||||||||| ||||||||||||||||||||||||||||||| | ||||
Sbjct 899 GATTTATAGACAAATGTTCCATGTACTATACTCCAGCGATCATCCTGATATCAGTTTGTT 958
Query 966 TTGTGGCTATCCCATTTGCATTGAAGGTTCACAACCTGAAACATTGGGTTCACTTAGCAC 1025
||| |||||||||||| ||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 959 TTGCGGCTATCCCATTCGCATTGAAGGTTCACAACCTGAAGCATTGGATTCACTTAGCAC 1018
Query 1026 TAGTTGTGTTAGTAAGTGCTTGTCCTTGTGGACTTATCCTCTCCACACCAGTAGCCACTT 1085
||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 1019 TAGTTGTGTTAGTTAGTGCTTGTCCTTGTGGGCTTATCCTCTCGACACCAGTAGCCACTT 1078
Query 1086 TCTGTGCACTCACAAAGGCAGCCACATCAGGACTTTTGATCAAAGGAGCTGATTACCTTG 1145
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1079 TCTGTGCACTCACTAAGGCAGCCACATCAGGACTTTTGATCAAAGGAGCTGATTATCTTG 1138
Query 1146 AAACCTTAGCCAAGATCAAGATTGTTGCTTTTGATAAAACCGGGACTATCACTAGAGGTG 1205
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
Sbjct 1139 AAACTTTAGCCAAGATCAAGGTTGTTGCTTTTGATAAAACCGGGACTATCACTAGAGGCG 1198
Query 1206 AGTTCATCGTCATGGATTTCCAGTCACTTTCTGAAGATATAAGCCTGCAGAGTCT-GCTT 1264
||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||
Sbjct 1199 AGTTCATCGTCATGGATTTCCAGTCACTTTCTGAAGATATAAGCCTGCACAG-CTTGCTT 1257
Query 1265 TACTGGGTATCAAGCACTGAGAGCAAGTCAAGCCATCCAATGGCTGCTGCAGTTGTGGAC 1324
||||||||||||||| | ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1258 TACTGGGTATCAAGCGCAGAGAGCAAGTCAAGCCATCCAATGGCTGCTGCACTTGTGGAC 1317
Query 1325 TATGCAAGATCTGTCTCTGTTGAACCTAAGCCTGAAGCGGTCGAAGACTACCAGAACTTT 1384
||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1318 TATGCAAAATCTGTCTCTGTTGAACCTAAGCCTGAAGCGGTCGAGGATTACCAGAACTTC 1377
Query 1385 CCAGGAGAAGGGATTTATGGGAAGATTGATGGTAAAGAAGTCTATATCGGTAACAAAAGG 1444
||||||||||| || ||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct 1378 CCAGGAGAAGGAATCTATGGGAAGATTGATGGCAAAGAAGTCTATATTGGTAACAAAAGG 1437
Query 1445 ATTGCTTCTAGAGCTGGGTGTTTATCAGTTCCAGATATTGATGTTGATACTAAAGGAGGA 1504
|||||||||||| ||||||||| ||||||||||||| ||||||||||||| |||||||||
Sbjct 1438 ATTGCTTCTAGATCTGGGTGTTCATCAGTTCCAGATGTTGATGTTGATACAAAAGGAGGA 1497
Query 1505 AAGACAATTGGATATGTATATGTTGGAGAAACACTAG-CTGGTGTTTTCAATCTCTCAGA 1563
||||||||||||||||| ||||||||| ||||||| | | ||||||||||||||||||||
Sbjct 1498 AAGACAATTGGATATGTCTATGTTGGAAAAACACT-GTCAGGTGTTTTCAATCTCTCAGA 1556
Query 1564 TGCTTGTAGATCTGGTGTAGCTCAAGCCATGAAAGAACTGAAATCGTTGGGAATTAAGAT 1623
||||||||||||||||||||||||||| ||||||||| ||||| | |||||||||||||
Sbjct 1557 TGCTTGTAGATCTGGTGTAGCTCAAGCAATGAAAGAATTGAAAGCTTTGGGAATTAAGAC 1616
Query 1624 TGCAATGCTTACCGGAGATAATCATGCCGCTGCAATGCATGCTCAAGAACAGCTAGGAAA 1683
||| ||||| |||||||||||||| ||||||||||||||||||||||||||||| || ||
Sbjct 1617 TGCGATGCTGACCGGAGATAATCAAGCCGCTGCAATGCATGCTCAAGAACAGCTTGGGAA 1676
Query 1684 TGCTATGGATATTGTTAGAGCAGAGCTTCTTCCAGAAGATAAATCTGAAATCATAAAACA 1743
|||||||||||||||| | || |||||||||||||||| ||||||||||||||| ||| |
Sbjct 1677 TGCTATGGATATTGTTCGTGCGGAGCTTCTTCCAGAAGGTAAATCTGAAATCATCAAAGA 1736
Query 1744 GTTAAAGAGAGAAGAAGGGCCAACGGCTATGGTAGGGGACGGGTTGAATGATGCACCAGC 1803
||| | ||||||||||||| |||| |||||||||||||| ||||||||||||||||||||
Sbjct 1737 GTTTATGAGAGAAGAAGGGTCAACAGCTATGGTAGGGGATGGGTTGAATGATGCACCAGC 1796
Query 1804 TTTAGCTACAGCGGATATTGGTATCTCAATGGGTGTTTCCGGCTCTGCACTTGCAACAGA 1863
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1797 TTTAGCTACAGCGGATATTGGTATCTCAATGGGTGTTTCCGGCTCTGCAATTGCAACAGA 1856
Query 1864 GACTGGTAATATAATTCTGATGTCCAATGATATCAGAAGAATACCGCAGGCGAT-AAAGC 1922
|||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| |
Sbjct 1857 GACTGGTAATATAATTCTGATGTCCAATGACATCAGAAGAATACCGCAGGCAATCAAA-C 1915
Query 1923 TTGCAAAAAGAGCGAAAAGGAAAGTGGTGGAGAATGTGGTCATATCAATCACTATGAAAG 1982
|||| | ||||||||||||||||||||||||||| ||||||| ||| |||||||||||||
Sbjct 1916 TTGCGAGAAGAGCGAAAAGGAAAGTGGTGGAGAACGTGGTCACATCGATCACTATGAAAG 1975
Query 1983 GAGCTATTCTTGCATTGGCATTTGCTGGTCATCCGCTGATTTGGGCAGCTGTTCTTGCAG 2042
||||||||||||| ||||||||||| |||||||||||||||||||||||||| |||| |
Sbjct 1976 GAGCTATTCTTGCGTTGGCATTTGCCGGTCATCCGCTGATTTGGGCAGCTGTACTTGTTG 2035
Query 2043 ATGTAGGAACTTGTCTGCTTGTGATCCTTAATAGCATGTTGTTGCTCAGTGATAAACATA 2102
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct 2036 ATGTAGGAACTTGTCTGCTTGTGATCCTCAATAGCATGTTGTTGCTCAGTGATAACCATA 2095
Query 2103 AAACTGGAAACAAATGTTATAGGGAGTCTTCTTCTTCCTCGGTTTTAATCGCGGAGAAAC 2162
||||||||||||||||||||||||||||||||||||| || | | | | | | ||||||
Sbjct 2096 AAACTGGAAACAAATGTTATAGGGAGTCTTCTTCTTCTTC--TAT-AGT-G-G-AGAAAC 2149
Query 2163 TTGAAGGTGATGCTGCTGGGGACATGGAAGCAGGCTTATTACCAAAGATCAGTGATAAGC 2222
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2150 TTGAAGGTGATGCTGCTGGGGACATGGAAGCAGGCTTATTACCAAAGATCAGCGATAAGC 2209
Query 2223 ATTGCAAGCCGGGCTGTTGTGGAACGAAGACTCAAGAGAAAGCGATGAAACCAGCTAAAG 2282
|||||||| | ||||| ||||||||||||||||||| ||||| |||| |||||||||||
Sbjct 2210 ATTGCAAGTCAGGCTGCTGTGGAACGAAGACTCAAGTGAAAGTGATGCAACCAGCTAAAT 2269
Query 2283 CCAGTTCGGACCATAGTCACTCTGGTTGTTGTGAGACGAAACAGAAAGACAATGTAACGG 2342
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2270 CCAGTTCGGACCATAGTCACTCTGGTTGTTGTGAGAAGAAACAGAAAGACAATGTAACGG 2329
Query 2343 TTGTGAAAAAGAGCTGTTGTGCAGAACCTGTTGATTTAGGACATGGCCATGACTCAGGGT 2402
|||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct 2330 TTGTGAAAAAGAGCAGTTGTGCAGAACCTGTTGATTTAGTACAAGGCCATGACTCAGGGT 2389
Query 2403 GTTGTGGTGACAAGAGTCAACAACCACACCAACACGAGGTGCAAGTGCAACAAAGCTGTC 2462
|||||||| ||||||||||||||||| | ||||||||||||||| ||| | ||||||
Sbjct 2390 GTTGTGGTAACAAGAGTCAACAACCAAATCAACACGAGGTGCAA---CAA-A--GCTGTC 2443
Query 2463 ATAACAAGCCATCTGGCCTGGAC 2485
|||||||||||||||||||||||
Sbjct 2444 ATAACAAGCCATCTGGCCTGGAC 2466
Score = 309 bits (167), Expect = 7e-83
Identities = 219/245 (89%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 2483 GACTCAGGGTGTTGTGGTGGCAAGAGTCAACAGCCACACCAACACGAGTTGCAACAAAGC 2542
|||||||||||||||||| |||||||||||| ||| | ||||||||| |||||||||||
Sbjct 2380 GACTCAGGGTGTTGTGGTAACAAGAGTCAACAACCAAATCAACACGAGGTGCAACAAAGC 2439
Query 2543 TGTCATGACAAGCCATCTGGCCTGGACATTGGAACTGGCCCAAAACACGAAGGTTCTTCA 2602
|||||| |||||||||||||||||||||||||||||||| || |||| ||||||||||||
Sbjct 2440 TGTCATAACAAGCCATCTGGCCTGGACATTGGAACTGGCTCACAACATGAAGGTTCTTCA 2499
Query 2603 ACATTGGTCAATCTGGAGGGGGATGCGAAAGAGGAACTGAAAGTCTTGGTCAATGGTTTT 2662
|| | ||||||||||| || |||| | |||||||| | ||||||| |||||| |||| |
Sbjct 2500 ACCGTAGTCAATCTGGAAGGAGATGAGCAAGAGGAAGTAAAAGTCTCGGTCAAAGGTTGT 2559
Query 2663 TGTTCAAGTCCTGCTGATCTCGCGATAACTAGCTTGAAAGTGAAGAGCGATAGCCATTGC 2722
|||||||||||||||||||||||| |||||||||||||||||||||||||| | ||| ||
Sbjct 2560 TGTTCAAGTCCTGCTGATCTCGCGGTAACTAGCTTGAAAGTGAAGAGCGATGGACATAGC 2619
Query 2723 AAGTC 2727
|||||
Sbjct 2620 AAGTC 2624
Score = 202 bits (109), Expect = 1e-50
Identities = 133/145 (92%), Gaps = 0/145 (0%)
Strand=Plus/Plus
Query 2719 TTGCAAGTCTAACTGTAGCAGCAGAGAGAGGTGCCACCATGGCAGCAACTGTTGTAGGAG 2778
||||||||||||||||||||||||||||| | |||||||||| |||| |||| | |||||
Sbjct 2691 TTGCAAGTCTAACTGTAGCAGCAGAGAGAAGAGCCACCATGGTAGCAGCTGTAGCAGGAG 2750
Query 2779 CTACGCTAAAGAGAGTTGCAGTCACGATCACCACCACACAAGGGCTCATGGCGTTGGAAC 2838
||| ||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct 2751 CTATGCTAAAGAGTGTTGCAGTCACCATCACCACCACACAAGGGCTAATGGCATTGGAAG 2810
Query 2839 CTTGAAAGAGATTGTGATTGAATAG 2863
|||||||||||||||||||||||||
Sbjct 2811 CTTGAAAGAGATTGTGATTGAATAG 2835
> Ahg480822 jgi|Araly1|480822|fgenesh2_kg.3__3523__AT2G19110.1
Length=3652
Score = 1681 bits (910), Expect = 0.0
Identities = 1728/2115 (82%), Gaps = 87/2115 (4%)
Strand=Plus/Plus
Query 16 GAAGAAGATGAC-CAAGAGTTACTTCGATGTTCTTGGAATTTGCTGTACATCGGAGGTTC 74
||||||| || | |||||||||||||||||||| ||||| || ||||||||||| ||||
Sbjct 42 GAAGAAGTTG-CAAAAGAGTTACTTCGATGTTCTCGGAATCTGTTGTACATCGGAAGTTC 100
Query 75 CGT-TGATCGAGAATATTCTCAATTCCA-TGGACGGTGTTAAAGAAT-TCTCTGTTATTG 131
| | | ||||||||||||||||| | || | ||||| |||||||||| | || || || |
Sbjct 101 C-TATCATCGAGAATATTCTCAAGT-CACTTGACGGCGTTAAAGAATAT-TCCGTCATCG 157
Query 132 TTCCGTCAAGAACCGTCATCGTCGTCCACGACA--CT-CTCATCCTCTCGCAGTTCCAAA 188
|||| || |||||||| ||||| || ||||||| || ||||| ||||| | |||||||
Sbjct 158 TTCCCTCGAGAACCGTGATCGTTGTTCACGACAGCCTCCTCAT-CTCTC-C-CTTCCAAA 214
Query 189 TCGTTAAAGCACTGAACCAAGCACA-GTTAGAAGCAAATGTGAGGGTAACCGGAGAAACC 247
| | ||| ||| |||||||||| | |||||||||||| ||||| |||| |||||||||
Sbjct 215 TTGCTAAGGCATTGAACCAAGC-TAGGTTAGAAGCAAACGTGAGAGTAAACGGAGAAACA 273
Query 248 AATTTCAAGAATAAATGGCCAAGTCCCTTT-GCGGTGGTTTCCGGCATACTTCTCCTCCT 306
|| |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 274 AACTTCAAGAACAAATGGCCAAG-CCCTTTCGCGGTGGTTTCCGGCATACTTCTCCTCCT 332
Query 307 CTCCTTCTTCAAA-TACCTTTACTCTCCCTTCCGTTGGCTCGCTGTCGCAGCCGTTGTCG 365
||||||||| ||| | | ||||| || || |||||| | || |||||||| |||| ||
Sbjct 333 CTCCTTCTT-AAAGTTTGTCTACTCGCCTTTACGTTGGATTGCAGTCGCAGCAGTTGCCG 391
Query 366 CTGGCATTTATCCGATA-TTAGCCAAAG-CTGTAGCATCTC-TT-GCAAGGTTTAGAATC 421
| || || ||||||||| || ||||||| || | || || | || | |||| |||| ||
Sbjct 392 CCGGTATATATCCGATACTT-GCCAAAGCCT-TTGCTTC-CATTAG-AAGGCTTAGGCTC 447
Query 422 GACATCAACATTCTT-GTTGTTGTAACCGTGGGAGCAACAATTGGC-ATGCAAGATTACA 479
|||||||||| | || || || |||||||| ||||||| || || |||||||||| ||
Sbjct 448 GACATCAACA-TATTGGTCATTATAACCGTGATAGCAACACTT-GCAATGCAAGATTTCA 505
Query 480 CAGAAGCTGCAGTAGTTGTCTTCTTGTTCACAATCGCTGAATGGCTCCAATCTAGAGCTA 539
|| ||||||| |||||| ||||||||||| || || || ||||| || | |||||||
Sbjct 506 TGGAGGCTGCAGCAGTTGTGTTCTTGTTCACCATAGCCGACTGGCTTGAAACAAGAGCTA 565
Query 540 GCTATAAGGC-AAGTGCAGTGATGCAGTCTTTGATGAGTTTAGCTCCACAAAAGGCCGTG 598
|||| | ||| || | | || ||||||||| ||||||| ||||||||||| ||||| |
Sbjct 566 GCTACAGGGCGAACT-CGGTAATGCAGTCTCTGATGAGCTTAGCTCCACAGAAGGCAATA 624
Query 599 ATTGCAGAGACTGGAGAAGAAGTTGAAGTGGATGAACTCAAGACTAACACAGTTATAGCT 658
|| ||||||||||| |||||||||||||| ||||| | |||| || ||||||| ||||
Sbjct 625 ATAGCAGAGACTGGTGAAGAAGTTGAAGTAGATGAGGTTAAGATTAGCACAGTTGTAGCG 684
Query 659 GTCAAAGCTGGTGAAACCATACCAATTGATGGAGTTGTTGTTGATGGAAACTGTGAAGTT 718
|| |||||||||||||||||||||||||||||| |||| || |||||||||||||||||
Sbjct 685 GTTAAAGCTGGTGAAACCATACCAATTGATGGAATTGTGGTGGATGGAAACTGTGAAGTA 744
Query 719 GATGAGAAAACTTTGACCGGTGAAGCATTCCCCGTGCCTAAACTGAAAGATTCGACGGTT 778
|| |||||||| || ||||| |||||||| || || ||||||| || |||||| ||||||
Sbjct 745 GACGAGAAAACCTTAACCGGCGAAGCATTTCCTGTACCTAAACAGAGAGATTCTACGGTT 804
Query 779 TGGGCTGGAACCATCAATCTAAATGGTTACATAACTGTGAACACCACTGCTCTAGCTGAG 838
||||||||||| |||||||||||||||||||||| |||||| || ||| || |||| | |
Sbjct 805 TGGGCTGGAACTATCAATCTAAATGGTTACATAAGTGTGAAAACAACTTCTTTAGC-GGG 863
Query 839 -GATTGCGTGGTTGCGAAGATGGCAAAACTTGTAGAAGAAGCTCAGAACAGCAAAACCGA 897
||||||||||||||||||||||| || || |||||||||||||||| ||| |||||| |
Sbjct 864 TGATTGCGTGGTTGCGAAGATGGCTAAGCTAGTAGAAGAAGCTCAGAGCAGTAAAACC-A 922
Query 898 AA-CTCAGAGATTTATAGATAAATGTTC-CAAGTACTATACTCCAGCGATCATCCTGA-T 954
|| | || ||| | ||||| |||||||| | |||||||||||||||| |||||| | | |
Sbjct 923 AATCCCAAAGACTAATAGACAAATGTTCTC-AGTACTATACTCCAGCAATCATCGT-AGT 980
Query 955 ATCAATCTGTTTTGT-GGC--TATCCC-ATT-TGCATTGAAGGTTCACAACCTGAAACAT 1009
||| | | || || | | | |||| || | | ||||||| |||||||| ||||||
Sbjct 981 ATC-AGC--TTGCGTCGCCATTGTCCCGGTTAT-TA-TGAAGGTCCACAACCTTAAACAT 1035
Query 1010 TGGGTT-CACTTAGCACTAGTTGTGTTAGTAAGT-GCTTGTCCTTGTGGACTTATCCTCT 1067
| |||| ||| | ||| ||||||||||||| ||| || ||||| ||||| ||||||||||
Sbjct 1036 T-GGTTCCACCTGGCATTAGTTGTGTTAGTCAGTGGC-TGTCCCTGTGGTCTTATCCTCT 1093
Query 1068 CCACACCAGTAGCCACTTTCTGTGCACTCAC-AAAGGCAGCCACATCAGGACTTTTGATC 1126
| |||||||| || |||||||||||||| || ||| ||||| || || || ||| |||||
Sbjct 1094 CTACACCAGTTGCTACTTTCTGTGCACTTACTAAA-GCAGCAACTTCCGGGCTTCTGATC 1152
Query 1127 AAAGGAGCTGATTACCTTGAAACCT-TAGCCAAGATCAAGATTGTTGCTTTTGATAAAAC 1185
||| | |||||||| ||||| | || | | |||||||| || | |||||| || |||||
Sbjct 1153 AAAAGTGCTGATTATCTTGACA-CTCTCTCAAAGATCAAAATCGCTGCTTTCGACAAAAC 1211
Query 1186 CGGGACTATCACTAGAGGTGAGTTCATCGTCATGGATTTCCAGTCACTTTCTGA-AGATA 1244
||||||||| || ||||| |||||||| ||||| |||||| ||||||| ||| | |||||
Sbjct 1212 CGGGACTATTACCAGAGGAGAGTTCATTGTCATAGATTTCAAGTCACTCTCT-AGAGATA 1270
Query 1245 TAAGCCT--GCAGAGTCTGCTTTACTGGGTATCAAGCACTGAGAGCAAGTCAAGCCATCC 1302
||||||| |||| | ||||||||||||||||||| ||| ||||| ||||| |||||
Sbjct 1271 TAAGCCTACGCAG-CT-TGCTTTACTGGGTATCAAGTGTTGAAAGCAAATCAAGTCATCC 1328
Query 1303 AATGGCTGCTGCAGTTGTGGACTATGC-AAGATCTGTCTCTGTTGAACCTAAGCCTGAAG 1361
||||||||| || | |||||||| || || ||| || |||||||| |||| ||||||||
Sbjct 1329 AATGGCTGCAACAATCGTGGACTACGCGAA-ATCCGTTTCTGTTGAGCCTAGGCCTGAAG 1387
Query 1362 CGGTCGAAGACTACCAGAACTTTCCAGGAGAAGGGATTTATGGGAAGATTGATGGTAAAG 1421
||| ||||| |||||||| |||||||| ||||| || || |||||||||||||| || |
Sbjct 1388 AGGTTGAAGATTACCAGAATTTTCCAGGTGAAGGAATCTACGGGAAGATTGATGGGAACG 1447
Query 1422 A-AGTCTATATCGGTAACAAAAGGATTGCTTCTAGAGCTGGGTGTTTATCAGTTCCAGAT 1480
| | |||| ||||| |||||||||||||||||| ||||||| |||| | | ||||||||
Sbjct 1448 ATA-TCTACATCGGGAACAAAAGGATTGCTTCTCGAGCTGGTTGTTCAACCGTTCCAGAG 1506
Query 1481 ATTGATGTTGATACTAAAGGAGGAAAGACAATTGGATATGTATATGTTGGAGAAACACTA 1540
| ||| |||||||| ||||| |||||||| ||||||| || ||||| || |||| ||||
Sbjct 1507 ACTGAAGTTGATACAAAAGGTGGAAAGACTGTTGGATACGTCTATGTAGGTGAAAGACTA 1566
Query 1541 GCTGGTGTTTTCAATCTCTCAGATGCTTGTAGATCTGGTGTAGCTCAAGCCATGAAAGAA 1600
|| || ||||||||||| || |||||||||||||| |||||| ||||||| |||| |||
Sbjct 1567 GCGGGAGTTTTCAATCTTTCTGATGCTTGTAGATCCGGTGTATCTCAAGCAATGACGGAA 1626
Query 1601 CTGAAATCGT-TGGGAATTAAGATTGCAATGCTTACCGGAGATAATCATGCCGCTGCAAT 1659
|||||||| | | || || || | |||||||| || ||||||| ||| ||||| |||||
Sbjct 1627 CTGAAATC-TCTAGGCATCAAAACCGCAATGCTAACGGGAGATAGTCAAGCCGCGGCAAT 1685
Query 1660 GCATGCTCAAGAACAGCTAGGAAATGCTATGGATATTGTTAG-A-GCAGAGCTTCTTCCA 1717
||||||||||||||||||||| |||||| ||||| ||| | | | | ||| ||||||||
Sbjct 1686 GCATGCTCAAGAACAGCTAGGGAATGCTTTGGATGTTG-T-GCATGGAGAACTTCTTCCT 1743
Query 1718 GAAGATAAATCTGAAATCATAAAACAGTTAAAGAGAGAAGAAGGGCCAACGGCTATGGTA 1777
||||||||||| |||||||| || |||| | ||| ||||||| ||||| || ||||||
Sbjct 1744 GAAGATAAATCCAAAATCATACAAGAGTT-TA-AGA-AAGAAGGACCAACCGCAATGGTA 1800
Query 1778 GGGGACGGGT-TGAATGATGCACCAGCTTTAGCTACAGCGGATATTGGTATCTCAATGGG 1836
|||||| ||| |||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 1801 GGGGAC-GGTGTGAATGATGCACCAGCTTTAGCTACAGCTGATATTGGTATCTCCATGGG 1859
Query 1837 TG-TTTCCGGCTCTGCACTTGCAACAG-AGACTGGTAATATAATTCTGATGTCCAATGAT 1894
| |||| |||||||| ||||| || | |||||||| |||| ||||| ||||| |||||
Sbjct 1860 -GATTTCTGGCTCTGCTCTTGCTAC-GCAGACTGGTCATATTATTCTAATGTCTAATGAC 1917
Query 1895 ATCAGAAGAATACCGCAGGCGATAAAGCTTGCAAAAAGAGCGAAAAGGAAAGTGGTGGAG 1954
|| ||||| ||||| || ||| ||||||| || | |||||| | ||||| || ||
Sbjct 1918 ATAAGAAGGATACCACAAGCGGTAAAGCTAGCTAGAAGAGCTCGGCGCAAAGTTGTTGAA 1977
Query 1955 AATGTGGT-CATATCAATCACTATGAAAGGAGCTATTCTTGCATTGGCATTTGCTGGTCA 2013
|| ||| | | | |||||| | | |||| || || || || ||||| |||||||||||
Sbjct 1978 AACGTGTTTCTT-TCAATCGTTTTAAAAGCAGGAATACTAGCTTTGGCGTTTGCTGGTCA 2036
Query 2014 TCCGCTGATTTGGGCAGCTGTTCTTGCAGATGTAGGAACTTGTCTGCTTGTGATCCTTAA 2073
||| | ||||||||||||||||||| |||||||| |||||||| |||||||| || ||
Sbjct 2037 TCCTTTAATTTGGGCAGCTGTTCTTGTTGATGTAGGGACTTGTCTTCTTGTGATTCTCAA 2096
Query 2074 TAGCATGTTGTTGCT 2088
||| |||||| ||||
Sbjct 2097 TAGTATGTTGCTGCT 2111
> Ahg473917 jgi|Araly1|473917|fgenesh2_kg.1__3871__AT2G19110.1
Length=3114
Score = 1297 bits (702), Expect = 0.0
Identities = 1283/1560 (82%), Gaps = 53/1560 (3%)
Strand=Plus/Plus
Query 554 GCAGTGATGCAGTCTTTGATGAGTTTAGCTCCACAAAAGGCCGTGATTGCAGAGACTGGA 613
||||| ||||||||| ||||||| ||||||||||| ||||| | || |||||||||||
Sbjct 13 GCAGTAATGCAGTCTCTGATGAGCTTAGCTCCACAGAAGGCAATAATAGCAGAGACTGGT 72
Query 614 GAAGAAGTTGAAGTGGATGAACTCAAGACTAACACAGTTATAGCTGTCAAAGCTGGTGAA 673
|||||||||||||| ||||| | |||| || ||||||| |||| || ||||||||||||
Sbjct 73 GAAGAAGTTGAAGTAGATGAGGTTAAGATTAGCACAGTTGTAGCGGTTAAAGCTGGTGAA 132
Query 674 ACCATACCAATTGATGGAGTTGTTGTTGATGGAAACTGTGAAGTTGATGAGAAAACTTTG 733
|||||||||||||||||| |||| || ||||||||||||||||| || |||||||| ||
Sbjct 133 ACCATACCAATTGATGGAATTGTGGTGGATGGAAACTGTGAAGTAGACGAGAAAACCTTA 192
Query 734 ACCGGTGAAGCATTCCCCGTGCCTAAACTGAAAGATTCGACGGTTTGGGCTGGAACCATC 793
||||| |||||||| || || ||||||| || |||||| ||||||||||||||||| |||
Sbjct 193 ACCGGCGAAGCATTTCCTGTACCTAAACAGAGAGATTCTACGGTTTGGGCTGGAACTATC 252
Query 794 AATCTAAATGGTTACATAACTGTGAACACCACTGCTCTAGCTGAG-GATTGCGTGGTTGC 852
||||||||||||||||||| |||||| || ||| || |||| | | ||||||||||||||
Sbjct 253 AATCTAAATGGTTACATAAGTGTGAAAACAACTTCTTTAGCGG-GTGATTGCGTGGTTGC 311
Query 853 GAAGATGGCAAAACTT-GTAGAAGAAGCTCAGAACAGCAAAACCGAAA-CTCAGAGATTT 910
||||||||| || || |||||||||||||||| ||| |||||| ||| | || ||| |
Sbjct 312 GAAGATGGCTAAG-TTAGTAGAAGAAGCTCAGAGCAGTAAAACC-AAATCCCAAAGACTA 369
Query 911 ATAGATAAATGTTC-CAAGTACTATACTCCAGCGATCATCCT-GATATCAATCTGTTTTG 968
||||| |||||||| || ||||||||||||||| |||||| | | ||||| || | |
Sbjct 370 ATAGACAAATGTTCTCA-GTACTATACTCCAGCAATCATCGTAG-TATCAG-CT-TGC-G 424
Query 969 TGGCTAT---CCCA-TT-TGCATTGAAGGTTCACAACCTGAAACATTGGGTTC-ACTTAG 1022
| || || ||| || | || |||||| |||||||| ||||||||| ||| || | |
Sbjct 425 TCGCCATTGTCCCGGTTATT-AT-GAAGGTCCACAACCTTAAACATTGG-TTCCACCTGG 481
Query 1023 CACTAGTTGTGTTAGTAAGTG-CTTGTCCTTGTGGACTTATCCTCTCCACACCAGTAGCC 1081
|| ||||||||||||| |||| || |||| ||||| ||||||||||| |||||||| ||
Sbjct 482 CATTAGTTGTGTTAGTCAGTGGCT-GTCCCTGTGGTCTTATCCTCTCTACACCAGTTGCT 540
Query 1082 ACTTTCTGTGCACTCAC-AAAGGCAGCCACATCAGGACTTTTGATCAAAGGAGCTGATTA 1140
|||||||||||||| || |||| |||| || || || ||| |||||||| | ||||||||
Sbjct 541 ACTTTCTGTGCACTTACTAAAG-CAGCAACTTCCGGGCTTCTGATCAAAAGTGCTGATTA 599
Query 1141 CCTTGAAAC-CT-TAGCCAAGATCAAGATTGTTGCTTTTGATAAAACCGGGACTATCACT 1198
|| || || || | | ||||| ||||| | |||||| || |||||||||||||| |||
Sbjct 600 TCTGGACACTCTCT--CAAAGATGAAGATCGCTGCTTTCGACAAAACCGGGACTATTACT 657
Query 1199 AGAGGTGAGTTCATCGTCATGGATTTCCAGTCACTTTCT-GAAGATATAAGCCTGCAG-A 1256
||||| |||||||| ||||| |||||| ||||||| ||| || ||||||| ||| | | |
Sbjct 658 AGAGGAGAGTTCATTGTCATAGATTTCAAGTCACTCTCTAGA-GATATAACCCTAC-GTA 715
Query 1257 GTCT-GCTTTACTGGGTATCAAGCACTGAGAGCAAGTCAAGCCATCCAATGGCTGCTGCA 1315
| || |||||||||||||||||| ||| ||||| ||||| |||||||||||||| ||
Sbjct 716 G-CTTGCTTTACTGGGTATCAAGTGTTGAAAGCAAATCAAGTCATCCAATGGCTGCAACA 774
Query 1316 GTTGTGGACTATGC-AAGATCTGTCTCTGTTGAACCTAAGCCTGAAGCGGTCGAAGACTA 1374
| |||||||| || || ||| | |||||||| |||| |||||||| ||| || |||||
Sbjct 775 ATCGTGGACTACGCGAA-ATCCATTTCTGTTGAGCCTAGGCCTGAAGAGGTAGAGGACTA 833
Query 1375 CCAGAACTTTCCAGGAGAAGGGATTTATGGGAAGATTGATGGTAAAGA-AGTCTATATCG 1433
|||||| |||||||| ||||| || || |||||||||||||| || || | |||| ||||
Sbjct 834 CCAGAATTTTCCAGGTGAAGGAATCTACGGGAAGATTGATGGGAACGATA-TCTACATCG 892
Query 1434 GTAACAAAAGGATTGCTTCTAGAGCTGGGTGTTTATCAGTTCCAGATATTGATGTTGATA 1493
| |||||||||||||||||| ||||||| |||| | |||||||||| ||||| |||||||
Sbjct 893 GGAACAAAAGGATTGCTTCTCGAGCTGGTTGTTCAACAGTTCCAGAGATTGAAGTTGATA 952
Query 1494 CTAAAGGAGGAAAGACAATTGGATATGTATATGTTGGAGAAACACTAGCTGGTGTTTTCA 1553
| ||||| |||||||| ||||||| || ||||| || |||| ||||||||| |||||||
Sbjct 953 CAAAAGGTGGAAAGACTGTTGGATACGTCTATGTAGGTGAAAGACTAGCTGGAGTTTTCA 1012
Query 1554 ATCTCTCAGATGCTTGTAGATCTGGTGTAGCTCAAGCCATGAAAGAACTGAAATCGT-TG 1612
|||| || |||||||||||||| |||||| ||||||| ||||||||||| ||||| | |
Sbjct 1013 ATCTTTCTGATGCTTGTAGATCAGGTGTATCTCAAGCAATGAAAGAACTAAAATC-TCTA 1071
Query 1613 GGAATTAAGATTGCAATGCTTACCGGAGATAATCATGCCGCTGCAATGCATGCTCAAGAA 1672
||||| || | |||||||| || ||||||| ||| || || ||||||||||||||||||
Sbjct 1072 GGAATCAAAACCGCAATGCTAACGGGAGATAGTCAAGCTGCGGCAATGCATGCTCAAGAA 1131
Query 1673 CAGCTAGGAAATGCTATGGATATTGTTAGA-GCAGAGCTTCTTCCAGAAGATAAATCTGA 1731
|| ||||| |||| | | ||| |||| | | | ||| |||||||| ||||||||||| |
Sbjct 1132 CAACTAGGGAATGTTTTAGATGTTGT-ACATGGAGAACTTCTTCCTGAAGATAAATCCAA 1190
Query 1732 AATCATAAAACAGTTAAAGAGAGAAGAAGGGCCAACGGCTATGGTAGGGGACGG-GTTGA 1790
||||||| || |||| |||| | | ||||| ||||| || |||||||||||||| || ||
Sbjct 1191 AATCATACAAGAGTTTAAGA-A-A-GAAGGACCAACCGCAATGGTAGGGGACGGTGT-GA 1246
Query 1791 ATGATGCACCAGCTTTAGCTACAGCGGATATTGGTATCTCAATGGGTG-TTTCCGGCTCT 1849
||||||||||||||||||||| ||| |||||||||||||| ||||| | |||| ||||||
Sbjct 1247 ATGATGCACCAGCTTTAGCTATAGCTGATATTGGTATCTCCATGGG-GATTTCTGGCTCT 1305
Query 1850 GCACTTGCAACAGAGACTGGTAATATAATTCTGATGTCCAATGATATCAGAAGAATACCG 1909
|| ||||||||| |||||||| |||| ||||||||||| ||||| || ||||| |||||
Sbjct 1306 GCTCTTGCAACACAGACTGGTCATATTATTCTGATGTCTAATGACATAAGAAGGATACCA 1365
Query 1910 CAGGCGATAAAGCTTGCAAAAAGAGCGAAAAGGAAAGTGGTGGAGAATGTG-GTCATATC 1968
|| ||| | ||||| || | |||||| | ||||| | || || ||| ||| | ||
Sbjct 1366 CAAGCGGTGAAGCTAGCGAGAAGAGCTCGGCGCAAAGTTATTGAAAACGTGTGTCTT-TC 1424
Query 1969 AATCACTATGAAAGGAGCTATTCTTGCATTGGCATTTGCTGGTCATCCGCTGATTTGGGC 2028
|||| | | |||| || || || || |||||||||||||||||||| ||||||||||
Sbjct 1425 CATCATTTTAAAAGCAGGAATACTGGCTTTGGCATTTGCTGGTCATCCTTTGATTTGGGC 1484
Query 2029 AGCTGTTCTTGCAGATGTAGGAACTTGTCTGCTTGTGATCCTTAATAGCATGTTGTTGCT 2088
||| ||||||| || |||||||||||| |||||||||| || ||||| |||||| ||||
Sbjct 1485 AGCGGTTCTTGTTGACGTAGGAACTTGTTTGCTTGTGATTCTCAATAGTATGTTGCTGCT 1544
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 108519108005
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5