BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G30280.1
Length=1048
Score E
Sequences producing significant alignments: (Bits) Value
Ahg491722 jgi|Araly1|491722|fgenesh2_kg.7__1155__AT4G30280.1 1443 0.0
Ahg475629 jgi|Araly1|475629|fgenesh2_kg.2__759__AT4G30280.1 1378 0.0
Ahg491721 jgi|Araly1|491721|fgenesh2_kg.7__1154__AT4G30290.1 1118 0.0
Ahg494858 jgi|Araly1|494858|fgenesh2_kg.8__674__AT5G48070.1 922 0.0
Ahg475586 jgi|Araly1|475586|fgenesh2_kg.2__716__AT4G30280.1 811 0.0
> Ahg491722 jgi|Araly1|491722|fgenesh2_kg.7__1155__AT4G30280.1
Length=1008
Score = 1443 bits (781), Expect = 0.0
Identities = 887/939 (94%), Gaps = 3/939 (0%)
Strand=Plus/Plus
Query 1 ATCAACAATACATTTGAGATATCAATACACCTCCAAAATATATACAAAAATGAAGCTTTC 60
||| |||||||||||||||||||||||| |||||| || || ||| ||||||||||||||
Sbjct 1 ATCGACAATACATTTGAGATATCAATACTCCTCCACAA-ATCTACCAAAATGAAGCTTTC 59
Query 61 TTGTGGTACAAGTTTTGCGTTCTTGATTATGTTTCTCTTTGCGGCACAATCTATGCATGT 120
|||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||
Sbjct 60 TTGTGGTACAAGTTTTGCGTTCTTGATTTTGTTTCTTTTTGCGGCACAATCTGTGCATGT 119
Query 121 CTATGCGGGTAGCTTCCACAAAGATGTTCAGATACATTGGGGTGACGGCCGTGGAAAGGT 180
| |||||||||||||||||||||| |||||||||||||||||||| ||||| |||||| |
Sbjct 120 CAATGCGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGATGGCCGCGGAAAGAT 179
Query 181 GCGCGACAGAGATGGAAAGCTTCTATCTCTCTCGCTCGACAAATCCTCTGGATCCGGTTT 240
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 180 TCGCGACAGAGATGGAAAGCTTCTTTCTCTCTCGCTCGACAAATCCTCTGGATCCGGTTT 239
Query 241 TCAGTCCAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGTCCCTGG 300
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 240 TCAGTCTAACCAGGAGTTTCTCTATGGCAAAGCTGAGGTTCAAATGAAACTTGTCTCTGG 299
Query 301 TAACTCAGCTGGAACAGTAACAACATTCTATCTTAAGTCTCCGGGAACTACGTGGGATGA 360
|||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||
Sbjct 300 TAACTCAGCTGGAACAGTGACAACATTTTATCTTAAATCTCCGGGAACTACGTGGGATGA 359
Query 361 GATTGATTTCGAGTTCTTAGGAAACCTAAGTGGTCATCCGTATACTCTCCATACTAATGT 420
|||||||||||||||||| ||||| || ||||||||||| ||||||||||||||||||||
Sbjct 360 GATTGATTTCGAGTTCTTGGGAAATCTTAGTGGTCATCCATATACTCTCCATACTAATGT 419
Query 421 TTACACAAAAGGCTCAGGAGACAAAGAACAACAATTTCATCTATGGTTCGACCCAACTGT 480
||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 420 TTACACAAAAGGCTCTGGAGATAAAGAACAACAATTTCATCTATGGTTCGACCCAACCGT 479
Query 481 TAACTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTATTTTTACAGTTGATGG 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 TAACTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTATTTTTACAGTTGATGG 539
Query 541 AATTCCTATTAGAGAGTTCAAGAACTCCGAGTCAATTGGAGTTCCGTTCCCAACGAAGCA 600
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 540 AATTCCCATTAGAGAGTTCAAGAATTCCGAGTCAATTGGAGTTCCGTTCCCAACGAAGCA 599
Query 601 ACCAATGAGGCTTTACGCGAGTCTCTGGGAAGCCGAGCATTGGGCTACAAGGGGAGGGTT 660
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 600 ACCAATGAGGCTCTACGCGAGTCTATGGGAAGCCGAGCATTGGGCTACAAGGGGAGGATT 659
Query 661 AGAGAAAACAGATTGGTCAAAGGCTCCTTTCACCGCTTTCTACAGAAACTACAATGTTGA 720
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 660 AGAGAAAACAGATTGGTCAAAGGCTCCTTTTACCGCTTTCTACAGAAACTACAATGTTGA 719
Query 721 AGGATGTGTATGGGCTAATGGAAAATCATCTTGTCCCGCAAATTCCTC-ATGGTTCACTC 779
|| ||||||||||||||||||||||||||||||||| | ||||| || |||||||||||
Sbjct 720 TGGGTGTGTATGGGCTAATGGAAAATCATCTTGTCCCACGAATTC-TCCATGGTTCACTC 778
Query 780 AACAACTCGATTCAAACGGCCAGACAAGAATGAAAGGGGTACAGAGTAAGTACATGGTCT 839
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 779 AACAACTCGATTCAAACGGCCAGACAAGAATGAAAGGAGTACAGAGTAAGTACATGGTCT 838
Query 840 ACAACTATTGTAACGACAAAAGAAGGTTTCCTCGAGGTGTTCCTGTAGAGTGCAGTTAAA 899
|||||||||| | ||| |||| ||||||||||||||||||||| | ||||||||||||||
Sbjct 839 ACAACTATTGCACCGATAAAAAAAGGTTTCCTCGAGGTGTTCCAGCAGAGTGCAGTTAAA 898
Query 900 TTGTTGATTCTTTGATACATGAATAAGTTACTTGGCATT 938
|||||||||||||||| | |||||||||||| | |||||
Sbjct 899 TTGTTGATTCTTTGATTCGTGAATAAGTTACATAGCATT 937
> Ahg475629 jgi|Araly1|475629|fgenesh2_kg.2__759__AT4G30280.1
Length=1023
Score = 1378 bits (746), Expect = 0.0
Identities = 922/1006 (92%), Gaps = 15/1006 (1%)
Strand=Plus/Plus
Query 47 AAAATGAAGCTTTCTTGTGGTACAAGTTTTGCGTTCTTGATTATGTTTC-TCTTTGCGGC 105
|||||||||||||||||||||||||||||| ||||||| ||| |||||| || ||||||
Sbjct 27 AAAATGAAGCTTTCTTGTGGTACAAGTTTTTCGTTCTTAATTCTGTTTCTTC-TTGCGGG 85
Query 106 ACAATCTATGCATGTCTATGCGGGTAGCTTCCACAAAGATGTTCAGATACATTGGGGTGA 165
||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 86 ACAATATGTGCATGTCTATGCGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGA 145
Query 166 CGGCCGTGGAAAGGTGCGCGACAGAGATGGAAAGCTTCTATCTCTCTCGCTCGACAAATC 225
||||| |||||| | | ||||| ||||||||| ||||| ||||||||||||||||||||
Sbjct 146 TGGCCGCGGAAAGATTCACGACAAAGATGGAAAACTTCTTTCTCTCTCGCTCGACAAATC 205
Query 226 CTCTGGATCCGGTTTTCAGTCCAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAAT 285
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 206 CTCTGGATCCGGTTTTCAGTCTAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAAT 265
Query 286 GAAACTTGTCCCTGGTAACTCAGCTGGAACAGTAACAACATTCTATCTTAAGTCTCCGGG 345
||||||||| |||||||| ||||||||||||||||||||||||||||| || || |||||
Sbjct 266 GAAACTTGTTCCTGGTAATTCAGCTGGAACAGTAACAACATTCTATCTAAAATCGCCGGG 325
Query 346 AACTACGTGGGATGAGATTGATTTCGAGTTCTTAGGAAACCTAAGTGGTCATCCGTATAC 405
|||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||
Sbjct 326 AACTACGTGGGATGAGATCGATTTCGAGTTCTTGGGAAACATAAGTGGTCATCCGTATAC 385
Query 406 TCTCCATACTAATGTTTACACAAAAGGCTCAGGAGACAAAGAACAACAATTTCATCTATG 465
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 386 TCTCCATACTAATGTTTACACAAAAGGCACAGGAGACAAAGAACAACAATTTCATCTATG 445
Query 466 GTTCGACCCAACTGTTAACTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTAT 525
||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 446 GTTCGACCCCACCGTTAATTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTAT 505
Query 526 TTTTACAGTTGATGGAATTCCTATTAGAGAGTTCAAGAACTCCGAGTCAATTGGAGTTCC 585
|||||| ||||||||||||||||||||||||||||| ||||| ||| |||||||||||||
Sbjct 506 TTTTACGGTTGATGGAATTCCTATTAGAGAGTTCAAAAACTCTGAGGCAATTGGAGTTCC 565
Query 586 GTTCCCAACGA-AGCAACCAATGAGGCTTTACGCGAGTCTCTGGGAAGCCGAGCATTGGG 644
||||||||||| | |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 566 GTTCCCAACGAGA-CAACCAATGAGGCTCTACGCGAGTCTCTGGGAAGCCGAGCATTGGG 624
Query 645 CTACAAGGGGAGGGTTAGAGAAAACAGATTGGTCAAAGGCTCCTTTCACCGCTTTCTACA 704
| ||||| ||||| ||||||||||||||||||||||| |||||||| || ||||||||||
Sbjct 625 CAACAAGAGGAGGATTAGAGAAAACAGATTGGTCAAAAGCTCCTTTTACTGCTTTCTACA 684
Query 705 GAAACTACAATGTTGAAGGATGTGTATGGGCTAATGGAAAATCATCTTGTCCCGCA-AAT 763
||||||||||||| || ||||||||||||||||| ||||||||||| ||| ||| | |||
Sbjct 685 GAAACTACAATGTCGATGGATGTGTATGGGCTAACGGAAAATCATCATGTTCCG-AGAAT 743
Query 764 TCCTCATGGTTCACTCAACAACTCGATTCAAACGGCCAGACAAGAATGAAAGGGGTACAG 823
||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 744 TCCCCATGGTTCACTCAAAAACTCGATTCAAACGGCCAGACAAGAATGAAAGGTGTACAA 803
Query 824 AGTAAGTACATGGTCTACAACTATTGTAACGACAAAAGAAGGTTTCCTCGAGGTGTTCCT 883
||||| |||||| ||||||||||||| | ||| ||||||||||||||||| | |||||||
Sbjct 804 AGTAAATACATGATCTACAACTATTGCACCGATAAAAGAAGGTTTCCTCGCGATGTTCCT 863
Query 884 GTAGAGTGCAGTTAAATTGTTGATTCTTTGATACATGAATAAGTTACTTGGCATTGCCTT 943
| || ||||| ||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 864 GCAGTGTGCACTTAAATTGTTGATTCTTTGAT----GAATAAGTTACTTGGTATTGCCTT 919
Query 944 AGTAACTCAATTGAGTTCTTA-CATATTTTTATCATTCATTTGTTGCTCATATGTATGCG 1002
||||||||||| |||| ||| | ||||||||||||| ||||||||||||||| |||| |
Sbjct 920 TGTAACTCAATTAAGTTTTTATC-TATTTTTATCATTTATTTGTTGCTCATATATATGTG 978
Query 1003 GTGTTTGTGTAA-GATGATTTT-AAGAAGTAATAAAAATAAATTAT 1046
|| ||| ||||| |||| ||| ||||||||||||| |||||||||
Sbjct 979 GTTTTTATGTAAAGATG-TTTGCAAGAAGTAATAAATATAAATTAT 1023
> Ahg491721 jgi|Araly1|491721|fgenesh2_kg.7__1154__AT4G30290.1
Length=961
Score = 1118 bits (605), Expect = 0.0
Identities = 802/897 (89%), Gaps = 14/897 (2%)
Strand=Plus/Plus
Query 73 TTTTGCGTTCTTGATTATGTTTCTCTTTGCGGCACAATCTATGCA-TGTCTATGCGGGTA 131
|||||||||||||||| | ||||||||||| |||||||||||| | |||||||| || |
Sbjct 55 TTTTGCGTTCTTGATTCTCTTTCTCTTTGCAGCACAATCTATG-AGCGTCTATGCAGGCA 113
Query 132 GCTTCCACAAAGATGTTCAGATACATTGGGGTGACGGCCGTGGAAAGGTGCGCGA-CA-G 189
|||| |||||||| ||| | |||||||||||||| || || |||||| | | ||| | |
Sbjct 114 GCTTTCACAAAGACGTTAAAATACATTGGGGTGATGGTCGAGGAAAGATTCACGATAATG 173
Query 190 AGATGGAAAGCTTCTATCTCTCTCGCTCGACAAATCCTCTGGATCCGGTTTTCAGTCCAA 249
| | ||||| ||||| ||||||||||| |||||||| ||||| || ||||| || || ||
Sbjct 174 A-AGGGAAA-CTTCTTTCTCTCTCGCTTGACAAATCTTCTGGTTCAGGTTTCCAATCTAA 231
Query 250 CCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGTCCCTGGTAACTCAGC 309
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 232 TCAAGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGTCCCTGGTAACTCTGC 291
Query 310 TGGAACAGTAACAACATTCTATCTTAAGTCTCCGGGAACTACGTGGGATGAGATTGATTT 369
|||||| || ||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 292 TGGAACCGTCACAACATTCTATCTTAAATCTCCGGGAACTACATGGGATGAGATTGATTT 351
Query 370 CGAGTTCTTAGGAAACCTAAGTGGTCATCCGTATACTCTCCATACTAATGTTTACACAAA 429
||||||||| || ||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 352 CGAGTTCTTGGGGAACATAAGTGGTCATCCATATACTCTCCACACTAATGTTTACACAAA 411
Query 430 AGGCTCAGGAGACAAAGAACAACAATTTCATCTATGGTTCGACCCAACTGTTAACTTTCA 489
|||||||||||||||||||||||| |||||||||||||| |||||||| | |||||| ||
Sbjct 412 AGGCTCAGGAGACAAAGAACAACAGTTTCATCTATGGTTTGACCCAACCGCTAACTTCCA 471
Query 490 CACTTATTGCATCACATGGAATCCCCAAAGGATTATTTTTACAGTTGATGGAATTCCTAT 549
|||||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||| ||
Sbjct 472 CACTTACTGCATCACATGGAATCCTCAAAGGATTATTTTTACTGTTGATGGGATTCCAAT 531
Query 550 TAGAGAGTTCAAGAACT-CCGAGTCAATTGGAGTTCCGTTCCCAACGAAGCAACCAATGA 608
||||||||||| ||| | |||||||| |||||| || ||||||||||||||||||||||
Sbjct 532 TAGAGAGTTCATGAA-TGCCGAGTCACGTGGAGTCCCATTCCCAACGAAGCAACCAATGA 590
Query 609 GGCTTTACGCGAGTCTCTGGGAAGCCGAGCATTGGGCTACAAGGGGAGGGTTAGAGAAAA 668
|||| || ||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 591 GGCTCTATGCGAGTCTCTGGGAAGCTGAGCATTGGGCTACAAGGGGAGGATTAGAGAAAA 650
Query 669 CAGATTGGTCAAAGGCTCCTTTCACCGCTTTCTACAGAAACTACAATGTTGAAGGATGTG 728
||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 651 CAGATTGGTCAAAAGCTCCTTTCACCGCTTTTTACAGAAACTACAATGTCGAAGGATGTG 710
Query 729 TATGGGCTAATGGAAAATCATCTTGTCCCGCAAATTCCTCA-TGGTTCACTCAACAACTC 787
| |||||||||||||||||| ||||||| |||||||| ||| |||||||||||| |||||
Sbjct 711 TTTGGGCTAATGGAAAATCAGCTTGTCCAGCAAATTC-TCAATGGTTCACTCAAAAACTC 769
Query 788 GATTCAAACGGCCAGACAAGAATGAAAGGGGTACAGAGTAAGTACATGGTCTACAACTAT 847
||||| || ||||||| |||||||||||||||||| ||||| |||||||| |||||||||
Sbjct 770 GATTCGAATGGCCAGAAAAGAATGAAAGGGGTACAAAGTAAATACATGGTTTACAACTAT 829
Query 848 TGTAACGACAAAA-GAAGGTTTCCTCGAGGTGTTCCTGTAGAGTGCAGTTAAATTGTTGA 906
|| | ||| |||| || |||||||||||||||||||| ||||||||| |||||| ||||
Sbjct 830 TGCACCGATAAAAAGA-GGTTTCCTCGAGGTGTTCCTCCAGAGTGCAGCTAAATTATTGA 888
Query 907 TTCTTTGATACATGAATAAGTTACTTGGCATTGCCTTAGTAACTCAATTGAGTTCTT 963
||||||||| | ||||||||||||||||||||| ||| |||||||||| | ||||||
Sbjct 889 TTCTTTGATTCGTGAATAAGTTACTTGGCATTGTCTTTGTAACTCAAT-G-GTTCTT 943
> Ahg494858 jgi|Araly1|494858|fgenesh2_kg.8__674__AT5G48070.1
Length=1102
Score = 922 bits (499), Expect = 0.0
Identities = 765/892 (86%), Gaps = 24/892 (3%)
Strand=Plus/Plus
Query 70 AAGTTTTGCGTTCTTGATTATGTTTCTCTTTGCGGCACAATCT-ATGCATGTCTATGCGG 128
||| || || ||| ||||||| |||||||| || ||||||| | | || ||||||||| |
Sbjct 65 AAGGTTCGCATTCCTGATTATCTTTCTCTTCGCTGCACAATATGA-GCGTGTCTATGCTG 123
Query 129 GTAGCTTCCACAAAGATGTTCAGATACATTGGGGTGACGGCCGTGGAAAGGTGCGCGACA 188
||||||| ||||| || ||||||||||| |||||||| |||||||||||| | | |||||
Sbjct 124 GTAGCTTTCACAAGGACGTTCAGATACACTGGGGTGATGGCCGTGGAAAGATTCTCGACA 183
Query 189 GA-GAT-GGAAAGCTTCTATCTCTCTCGCTCGACAAATCCTCTGGATCCGGTTTTCAGTC 246
| | | ||||| ||||| ||||||||||||||||||| |||||| ||||||||||||||
Sbjct 184 -ATG-TCGGAAATCTTCTTTCTCTCTCGCTCGACAAATTCTCTGGTTCCGGTTTTCAGTC 241
Query 247 CAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAATGAAACTTGTCCCTGGTAACTC 306
| | || |||||||| ||||| |||| |||||||||||||||||||| |||||||||||
Sbjct 242 CCATCAAGAGTTTCTATATGGAAAAGTTGAGGTTCAAATGAAACTTGTACCTGGTAACTC 301
Query 307 AGCTGGAACAGTAACAACATTCTATCTTAAGTCTCCGGGAACTACGTGGGATGAGATTGA 366
||||||||||| |||||||||||||| || || || |||||||||||||||||||| ||
Sbjct 302 TGCTGGAACAGTGACAACATTCTATCTAAAATCGCCTGGAACTACGTGGGATGAGATAGA 361
Query 367 TTTCGAGTTCTTAGGAAACCTAAGTGGTCATCCGTATACTCTCCATACTAATGTTTACAC 426
||| |||||||| |||||| ||||||||||||| ||||| || |||||||||||||||||
Sbjct 362 TTTTGAGTTCTTGGGAAACATAAGTGGTCATCCATATACACTTCATACTAATGTTTACAC 421
Query 427 AAAAGGCTCAGGAGACAAAGAACAACAATTTCATCTATGGTTCGACCCAACTGTTA-ACT 485
||||||| ||||||||||||||||||| |||||||||||||| |||||||||| || |||
Sbjct 422 AAAAGGCACAGGAGACAAAGAACAACAGTTTCATCTATGGTTTGACCCAACTG-TACACT 480
Query 486 TTCACACTTATTGCATCACATGGAATCCCCAAAGGATTATTTTTACAGTTGATGGAATTC 545
||||||||||||| |||| |||||||||||||||| | ||||||||| | ||||||||||
Sbjct 481 TTCACACTTATTGTATCATATGGAATCCCCAAAGGGTCATTTTTACAATAGATGGAATTC 540
Query 546 CTATTAGAGAGTTCAAGAACTCCGAGTCAATTGGAGTTCCGTTCCCAACGAAGCAACCAA 605
| || ||||| |||||||||||||| || |||||||||| ||||||| | | |||||||
Sbjct 541 CGATAAGAGAATTCAAGAACTCCGAATCCGTTGGAGTTCCCTTCCCAAAGCATCAACCAA 600
Query 606 TGAGGCTTTACGCGAGTCTCTGGGAAGCCGAGCATTGGGCTACAAGGGGAGGGTTAGAGA 665
|||| || || ||||| || |||||||||||||||||||| ||||| ||||| |||||||
Sbjct 601 TGAGACTCTATGCGAGCCTTTGGGAAGCCGAGCATTGGGCCACAAGAGGAGGATTAGAGA 660
Query 666 AAACAGATTGGT-CAAAGGCTCCTTTCACCGCTTTCTACAGAAACTACAATGTTGAAGGA 724
||||||| |||| |||| ||||||||||||||||||||||||||||||||||| || | |
Sbjct 661 AAACAGACTGGTCCAAA-GCTCCTTTCACCGCTTTCTACAGAAACTACAATGTGGATGCA 719
Query 725 TGTGTATGGGCTAATGGAAAATCATCTTG-TCC-CGCAAATTCCTCATGGTTCACTCAAC 782
|||||||||||| ||||||||||||| || || |||| |||||||||||||||||||
Sbjct 720 TGTGTATGGGCTCATGGAAAATCATCATGCTCTGCGCA--TTCCTCATGGTTCACTCAAG 777
Query 783 AACTCGATT-CAAACGGCCAGACA-AGAATGAAAGGGGTACAGAGTAAGTACATGGTCTA 840
||| |||| |||| ||| ||| | ||| ||||| ||| |||||| ||||||||||||||
Sbjct 778 TACTTGATTTCAAA-GGCAAGA-ATAGAGTGAAATGGGCACAGAGAAAGTACATGGTCTA 835
Query 841 CAACTATTGTAAC-GACAA-AAGAAGGTTTCCTCGAGGTGTTCCTGTAGAGTGCAGTTAA 898
||||||||| | | || || || ||| ||||||| ||||| |||| |||||||||||||
Sbjct 836 CAACTATTGCA-CTGATAAGAA-AAGATTTCCTCAAGGTGCTCCTCCAGAGTGCAGTTAA 893
Query 899 ATTGTTGATTCTTTGATACATGAATAAGTTACT-TGGCATTGCCTTAGTAAC 949
|| ||||| |||||| || |||||| | | | |||||||| || |||||
Sbjct 894 ATCACTGATTGTTTGATTCACGAATAAATCA-TGTGGCATTGTTTTTGTAAC 944
> Ahg475586 jgi|Araly1|475586|fgenesh2_kg.2__716__AT4G30280.1
Length=993
Score = 811 bits (439), Expect = 0.0
Identities = 504/536 (94%), Gaps = 2/536 (0%)
Strand=Plus/Plus
Query 47 AAAATGAAGCTTTCTTGTGGTACAAGTTTTGCGTTCTTGATTATGTTTC-TCTTTGCGGC 105
|||||||||||||||||||||||||||||| ||||||| ||| |||||| || ||||||
Sbjct 27 AAAATGAAGCTTTCTTGTGGTACAAGTTTTTCGTTCTTAATTCTGTTTCTTC-TTGCGGG 85
Query 106 ACAATCTATGCATGTCTATGCGGGTAGCTTCCACAAAGATGTTCAGATACATTGGGGTGA 165
||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 86 ACAATATGTGCATGTCTATGCGGGTAGCTTCCACAAAGACGTTCAGATACATTGGGGTGA 145
Query 166 CGGCCGTGGAAAGGTGCGCGACAGAGATGGAAAGCTTCTATCTCTCTCGCTCGACAAATC 225
||||| |||||| | | ||||| ||||||||| ||||| ||||||||||||||||||||
Sbjct 146 TGGCCGCGGAAAGATTCACGACAAAGATGGAAAACTTCTTTCTCTCTCGCTCGACAAATC 205
Query 226 CTCTGGATCCGGTTTTCAGTCCAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAAT 285
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 206 CTCTGGATCCGGTTTTCAGTCTAACCAGGAGTTTCTCTATGGCAAAGCCGAGGTTCAAAT 265
Query 286 GAAACTTGTCCCTGGTAACTCAGCTGGAACAGTAACAACATTCTATCTTAAGTCTCCGGG 345
||||||||| |||||||| ||||||||||||||||||||||||||||| || || |||||
Sbjct 266 GAAACTTGTTCCTGGTAATTCAGCTGGAACAGTAACAACATTCTATCTAAAATCGCCGGG 325
Query 346 AACTACGTGGGATGAGATTGATTTCGAGTTCTTAGGAAACCTAAGTGGTCATCCGTATAC 405
|||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||
Sbjct 326 AACTACGTGGGATGAGATCGATTTCGAGTTCTTGGGAAACATAAGTGGTCATCCGTATAC 385
Query 406 TCTCCATACTAATGTTTACACAAAAGGCTCAGGAGACAAAGAACAACAATTTCATCTATG 465
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 386 TCTCCATACTAATGTTTACACAAAAGGCACAGGAGACAAAGAACAACAATTTCATCTATG 445
Query 466 GTTCGACCCAACTGTTAACTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTAT 525
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 446 GTTCGACCCAACCGTTAACTTTCACACTTATTGCATCACATGGAATCCCCAAAGGATTAT 505
Query 526 TTTTACAGTTGATGGAATTCCTATTAGAGAGTTCAAGAACTCCGAGTCAATTGGAG 581
|||||| ||||||||||||||||||||||||||||| ||||| ||| |||||||||
Sbjct 506 TTTTACGGTTGATGGAATTCCTATTAGAGAGTTCAAAAACTCTGAGGCAATTGGAG 561
Score = 538 bits (291), Expect = 3e-152
Identities = 392/440 (89%), Gaps = 10/440 (2%)
Strand=Plus/Plus
Query 610 GCTTTACGCGAGTCTCTGGGAAGCCGAGCATTGGGCTACAAGGGGAGGGTTAGAGAAAAC 669
||| |||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||
Sbjct 561 GCTCTACGCGAGTCTCTGGGAAGCCGAGCATTGGGCAACAAGAGGAGGATTAGAGAAAAC 620
Query 670 AGATTGGTCAAAGGCTCCTTTCACCGCTTTCTACAGAAACTACAATGTTGAAGGATGTGT 729
|||||||||||| |||||||| || ||||||||||||||||||||||| || ||||| ||
Sbjct 621 AGATTGGTCAAAAGCTCCTTTTACTGCTTTCTACAGAAACTACAATGTCGATGGATG-GT 679
Query 730 ATGGGCTAATGGAAAATCATCTTGTCCCGCAAATTCCTCATGGTTCACTCAACAACTCGA 789
||||||||| ||||||||||| ||| |||| |||||| |||||||||||||| |||||||
Sbjct 680 ATGGGCTAACGGAAAATCATCATGTTCCGCGAATTCCCCATGGTTCACTCAAAAACTCGA 739
Query 790 TTCAAACGGCCAGACAAGAATGAAAGGGGTACAGAGTAAGTACATGGTCTACAACTATTG 849
|||||| |||||||||||||||||||| ||||| ||||| |||||| |||||||||||||
Sbjct 740 TTCAAATGGCCAGACAAGAATGAAAGGTGTACAAAGTAAATACATGATCTACAACTATTG 799
Query 850 TAACGACAAAAGAAGGTTTCCTCGAGGTGTTCCTGTAGAGTGCAGTTAAATTGTTGATTC 909
| ||| ||||||||||||||||| | |||||||| || ||||| |||||||||||||||
Sbjct 800 CACCGATAAAAGAAGGTTTCCTCGCGATGTTCCTGCAGTGTGCACTTAAATTGTTGATTC 859
Query 910 TTTGATACATGAATAAGTTACTTGGCATTGCCTTAGTAACTCAATTGAGTTCTTA-CATA 968
|||||| ||||||||||||||| |||||||| ||||||||||| |||| ||| | ||
Sbjct 860 TTTGAT----GAATAAGTTACTTGGTATTGCCTTTGTAACTCAATTAAGTTTTTATC-TA 914
Query 969 TTTTTATCATTCATTTGTTGCTCATATGTATGCGGTGTTTGTGTAA-GATGATTTT-AAG 1026
||||||||||| ||||||||||||||| |||| ||||||| ||||| |||| ||| |||
Sbjct 915 TTTTTATCATTTATTTGTTGCTCATATATATGTGGTGTTTATGTAAAGATG-TTTGCAAG 973
Query 1027 AAGTAATAAAAATAAATTAT 1046
|||||||||| |||||||||
Sbjct 974 AAGTAATAAATATAAATTAT 993
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 38999744091
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5