BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G30520.1
Length=2407
Score E
Sequences producing significant alignments: (Bits) Value
Ahg889064 jgi|Araly1|889064|Al_scaffold_0007_1050 3192 0.0
Ahg932396 jgi|Araly1|932396|scaffold_400384.1 1642 0.0
> Ahg889064 jgi|Araly1|889064|Al_scaffold_0007_1050
Length=1947
Score = 3192 bits (1728), Expect = 0.0
Identities = 1877/1950 (96%), Gaps = 6/1950 (0%)
Strand=Plus/Plus
Query 268 ATGGTAGTAGTAACAAAGAAGACCATGAAGATTCAAATTCATCTCCTTTACTCGTTCTTG 327
||||||||||||||||||||||| |||| ||||||| |||||||||| |||| | || ||
Sbjct 1 ATGGTAGTAGTAACAAAGAAGACGATGATGATTCAACTTCATCTCCTCTACTTGCTC-TG 59
Query 328 -TTCCTCTGTTTCTCTACT-CTCACTCTATCTTCTGAGCCCAGAAACCCTGAAGTTGAGG 385
||||||||||| |||||| || ||||| |||||||||||||||||||||||||||||||
Sbjct 60 TTTCCTCTGTTTTTCTACTCCT-ACTCTCTCTTCTGAGCCCAGAAACCCTGAAGTTGAGG 118
Query 386 CGTTGATAAGTATAAGGAACAATTTGCATGATCCTCATGGAGCTTTGAACAATTGGGACG 445
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct 119 CGTTGATAAGTATAAAGAACGATTTGCATGATCCTCATGGAGCTTTGAACAATTGGGACG 178
Query 446 AGTTTTCAGTTGATCCTTGTAGCTGGGCTATGATCACTTGCTCTCCCGACAACCTCGTCA 505
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 179 AGTTTTCAGTTGATCCTTGTAGCTGGGCTATGATCACTTGCTCTCCCGACTACCTCGTCA 238
Query 506 TTGGACTAGGAGCGCCGAGCCAGTCTCTCTCGGGAGGTTTATCTGAGTCTATCGGAAATC 565
||||||| ||||||||||||||||||||||||||| ||||||||| ||| ||||||||||
Sbjct 239 TTGGACTGGGAGCGCCGAGCCAGTCTCTCTCGGGAAGTTTATCTGGGTCAATCGGAAATC 298
Query 566 TCACAAATCTCCGACAAGTGTCATTGCAAAATAACAACATCTCCGGCAAAATTCCACCGG 625
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 299 TCACTAATCTCCGACAAGTGTCATTGCAAAATAACAACATCTCCGGCAAAATTCCACCGG 358
Query 626 AGCTCGGTTTTCTACCCAAATTACAAACCTTGGATCTTTCCAACAACCGATTCTCCGGTG 685
|| | | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 359 AGATTGCTTTTCTACCCAAATTACAAACCTTGGATCTTTCCAACAACCGATTCTCCGGTG 418
Query 686 ACATCCCTGTTTCCATCGACCAGCTAAGCAGCCTTCAATATCTGAGACTCAACAACAACT 745
|||||||||||||| | || ||||||||||||||||||||||||||||||||||||||||
Sbjct 419 ACATCCCTGTTTCCGTTGAGCAGCTAAGCAGCCTTCAATATCTGAGACTCAACAACAACT 478
Query 746 CTTTGTCTGGGCCCTTCCCTGCTTCTTTGTCCCAAATTCCTCACCTCTCCTTCTTGGACT 805
|| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 479 CTCTGTCTGGGCCCTTCCCTGCTTCTTTGTCCCAAATCCCTCACCTCTCCTTCTTGGACT 538
Query 806 TGTCTTACAACAATCTCAGTGGCCCTGTTCCTAAATTCCCAGCAAGGACTTTCAACGTTG 865
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct 539 TGTCTTACAACAATCTCAGTGGCCCTGTTCCTAAATTCCCAGCCAGGACTTTCAATGTTG 598
Query 866 CTGGTAATCCTTTGATTTGTAGAAGCAACCCACCTGAGATTTGTTCTGGATCAATCAATG 925
|||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 599 CTGGTAATCCTTTGATTTGTAGAAACAGTCCACCTGAGATTTGTTCTGGATCAATCAATG 658
Query 926 CAAGTCCACTTTCTGTTTCTTTGAGCTCTTCATCAGGACGCAGGTCTAATAGATTGGCAA 985
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 659 CAAGTCCTCTTTCTGTTTCTTTGAGCTCTTCATCAGGACGCAGGTCTAATAGATTGGCGA 718
Query 986 TAGCTCTTAGTGTAAGCCTTGGCTCTGTTGTTATACTAGTCCTTGCTCTCGGGTCCTTT- 1044
|||||||| ||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 719 TAGCTCTTGGTGTAAGCCTTGGCTTTGTTGTTATACTACTCCTTGCTCTCGGGTCCTTTC 778
Query 1045 TGTTGGTACCGAAAGAAACAAAGAAGGCTACTGATCCTTAACTTAAACGATAAACAAGAG 1104
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 779 T-TTGGTACCGAAAGAAACAAAGAAGGCTACTGATCCTTAACTTAAACGATAAACAAGAG 837
Query 1105 GAAGGGCTTCAAGGACTTGGGAATCTAAGAAGCTTCACATTCAGAGAACTCCATGTTTAT 1164
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 838 GAAGGGCTTCAAGGACTTGGGAATCTAAGAAGCTTCACATTCAGAGAACTCCATGTTTCT 897
Query 1165 ACAGATGGTTTCAGTTCCAAGAACATTCTCGGCGCTGGTGGATTCGGTAATGTGTACAGA 1224
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 898 ACAGATGGTTTCAGTTCCAAGAACATTCTCGGCGCTGGAGGATTCGGTAATGTGTACAGA 957
Query 1225 GGCAAGCTTGGAGATGGGACAATGGTGGCAGTGAAACGGTTGAAGGATATTAATGGAACC 1284
|| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 958 GGAAAGCTTGGAGACGGGACAATGGTGGCAGTGAAACGGTTGAAGGATATTAACGGAACC 1017
Query 1285 TCAGGGGATTCACAGTTTCGTATGGAGCTAGAGATGATTAGCTTAGCTGTTCATAAGAAT 1344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1018 TCAGGGGATTCACAGTTTCGTATGGAGCTAGAGATGATTAGCTTAGCTGTTCATAAGAAT 1077
Query 1345 CTGCTTCGGTTAATTGGTTATTGCGCAACTTCTGGTGAAAGGCTTCTTGTTTACCCTTAC 1404
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1078 CTGCTTCGGTTAATTGGTTATTGCGCAACTTCTGGTGAAAGACTTCTTGTTTACCCTTAC 1137
Query 1405 ATGCCTAATGGAAGCGTCGCCTCTAAGCTTAAATCTAAACCGGCATTGGACTGGAACATG 1464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1138 ATGCCTAATGGAAGCGTCGCCTCTAAGCTTAAATCTAAACCGGCATTGGACTGGAACATG 1197
Query 1465 AGGAAGAGGATAGCAATTGGTGCAGCGAGAGGTTTGTTGTATCTACATGAGCAATGTGAT 1524
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1198 AGGAAGAGGATAGCAATTGGTGCAGCCAGAGGTTTGTTGTATCTACATGAGCAATGTGAT 1257
Query 1525 CCCAAGATCATTCATAGAGATGTAAAGGCAGCTAATATTCTCTTAGACGAGTGCTTTGAA 1584
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1258 CCCAAGATCATTCACAGAGATGTAAAGGCAGCTAATATTCTCTTAGACGAGTGCTTTGAA 1317
Query 1585 GCTGTTGTTGGTGACTTTGGACTCGCAAAGCTCCTTAACCATGCGGATTCTCATGTCACA 1644
||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct 1318 GCTGTTGTTGGTGACTTTGGACTCGCAAAGCTCCTTAACCACGCAGATTCTCATGTCACA 1377
Query 1645 ACTGCGGTCCGTGGTACGGTTGGCCACATTGCACCTGAATATCTCTCCACTGGTCAGTCT 1704
|| || || |||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1378 ACGGCAGTTCGTGGTACGGTTGGCCACATTGCACCCGAATATCTCTCCACCGGTCAGTCT 1437
Query 1705 TCTGAGAAAACCGATGTGTTTGGGTTCGGTATACTATTGCTCGAGCTCATAACCGGACTG 1764
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||
Sbjct 1438 TCTGAGAAAACCGATGTGTTTGGGTTCGGTATACTCTTGCTCGAGCTCATAACTGGAATG 1497
Query 1765 AGAGCTCTTGAGTTTGGTAAAACCGTTAGCCAGAAAGGAGCTATGCTTGAATGGGTGAGG 1824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1498 AGAGCTCTTGAGTTTGGTAAAACCGTTAGCCAGAAAGGAGCTATGCTTGAATGGGTGAGG 1557
Query 1825 AAATTACATGAAGAGATGAAAGTAGAGGAACTATTGGATCGAGAACTCGGAACTAACTAC 1884
||||| || ||||||||||||||||||||||| |||| ||||||||||| || ||||||
Sbjct 1558 AAATTGCACGAAGAGATGAAAGTAGAGGAACTGGTGGACCGAGAACTCGGGACAAACTAC 1617
Query 1885 GATAAGATTGAAGTTGGAGAGATGTTGCAAGTGGCTTTGCTATGCACACAATATCTGCCA 1944
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1618 GATAAGATTGAAGTTGGAGAGATGTTGCAAGTGGCTTTGCTATGCACACAATATCTTCCG 1677
Query 1945 GCTCATCGTCCTAAAATGTCTGAAGTTGTTTTGATGCTTGAAGGCGATGGATTAGCCGAG 2004
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct 1678 GCTCATCGTCCTAAAATGTCTGAAGTGGTTTTGATGCTTGAAGGCGATGGATTAGCGGAG 1737
Query 2005 AGATGGGCTGCTTCGCATAACCATTCACATTTCTACCATGCCAATATCTCTTTCAAGACA 2064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1738 AGATGGGCTGCTTCGCATAACCATTCACATTTCTACCATGCCAATATCTCTTTCAAGACA 1797
Query 2065 ATCTCTTCTCTGTCTACTACTTCTGTCTCAAGGCTTGACGCACATTGCAATGATCCAACT 2124
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1798 ATATCTTCTCTGTCTACTACTTCTGTCTCAAGGCTTGACGCACATTGCAATGACCCAACT 1857
Query 2125 TATCAAATGTTTGGATCTTCGGCTTTCGATGATGACGATGATCATCAGCCTTTAGATTCC 2184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1858 TATCAAATGTTTGGATCTTCGGCTTTCGATGATGACGATGATCATCAGCCTTTAGATTCA 1917
Query 2185 TTTGCCATGGAACTATCCGGTCCAAGATAA 2214
|| |||||||||||||||||||||||||||
Sbjct 1918 TTCGCCATGGAACTATCCGGTCCAAGATAA 1947
> Ahg932396 jgi|Araly1|932396|scaffold_400384.1
Length=1967
Score = 1642 bits (889), Expect = 0.0
Identities = 1483/1769 (84%), Gaps = 43/1769 (2%)
Strand=Plus/Plus
Query 318 CTCGTTCTTGTT-C--CTCTGTTTC-TC--TAC-TCTCACTCTATCTTCTGAGCCCAGAA 370
||| |||||||| | ||||||||| || ||| | | |||| ||||||||||||||||
Sbjct 72 CTCTTTCTTGTTACTACTCTGTTTCTTCGTTACTTGT-TCTCTCTCTTCTGAGCCCAGAA 130
Query 371 ACCCTGAAGTTGAGGCGTTGATAAGTATAAGGAACAATTTGCATGATCCTCATGGAGCTT 430
|||||||||| ||||||||||||| |||| |||| |||| |||||||| ||||| | ||
Sbjct 131 ACCCTGAAGTGGAGGCGTTGATAAACATAAAGAACGATTTACATGATCCACATGGTGTTT 190
Query 431 TGAACAATTGGGACGAGTTTTCAGTTGATCCTTGTAGCTGGGCTATGATCACTTGCTCTC 490
||||||| ||||| |||||||| |||||||||||||| ||| ||||||||||||| ||||
Sbjct 191 TGAACAACTGGGATGAGTTTTCTGTTGATCCTTGTAGTTGGACTATGATCACTTGTTCTC 250
Query 491 CCGACAACCTCGTCATTGGACTAGGAGCGCCGAGCCAGTCTCTCTCGGGAGGTTTATCTG 550
| ||||||||||| | ||| |||||||| || || |||||||| || ||| ||||||||
Sbjct 251 CAGACAACCTCGTAACTGGCCTAGGAGCTCCAAGTCAGTCTCTTTCAGGAACTTTATCTG 310
Query 551 AGTCTATCGGAAATCTCACAAATCTCCGACAAGTGTCATTGCAAAATAACAACATCTCCG 610
|||||| ||||||||||| ||||| | |||||||| ||| || || || ||||||||||
Sbjct 311 GGTCTATTGGAAATCTCACTAATCTTCAACAAGTGTTATTACAGAACAATAACATCTCCG 370
Query 611 GCAAAATTCCACCGGAGCTCGGTTTTCTACCCAAATTACAAACCTTGGATCTT-TCCAAC 669
| ||||| ||||||||||| ||| ||| ||||||||||| || |||||| || |||||
Sbjct 371 GTAAAATCCCACCGGAGCTTTGTTCTCTTCCCAAATTACAGACTTTGGAT-TTATCCAAT 429
Query 670 AACCGATTCTCCGGTGACATCCCTGTTTCCATCGACCAGCTAAGCAGCCTTC-AATATCT 728
||||| ||||||||||| ||||| | ||| | |||| || || | | || |||||||
Sbjct 430 AACCGGTTCTCCGGTGAAATCCCCGGTTCGGTTAACCAACTGAGTAATC-TCGAATATCT 488
Query 729 GAGACTCAACAACAACTCTTTGTCTGGGCCCTTCCCTGCTTCTTTGTCCCAAATTCCTCA 788
||| | ||||||||||| || ||||||||||| |||||||||||||| ||||| |||||
Sbjct 489 GAGGTTGAACAACAACTCATTATCTGGGCCCTTTCCTGCTTCTTTGTCTCAAATCCCTCA 548
Query 789 CCTCTCCTTCTTGGACTTGTCTTACAACAATCTCAGTGGCCCTGTTCCTAAATTCCCAGC 848
|||||| ||||| ||||||||||| ||||||||||| || |||||| |||||||||| ||
Sbjct 549 CCTCTCTTTCTTAGACTTGTCTTATAACAATCTCAGAGGTCCTGTTTCTAAATTCCCTGC 608
Query 849 AAGGACTTTCAACGTTGCTGGTAATCCTTTGATTTGTAGAAGCAACCCACCTGAGATTTG 908
|||||| ||||| |||||||| |||||||||||||||| || || |||||||||||||||
Sbjct 609 AAGGACATTCAATGTTGCTGGGAATCCTTTGATTTGTAAAAACAGCCCACCTGAGATTTG 668
Query 909 TTCTGGATCAATCAATGCAAGTCCACTTTCTGTTTCTTTGA-GCTCTTCATCAGGACGCA 967
||| |||||||||||||||||||| |||||||| ||||| | | |||||||||||||| |
Sbjct 669 TTCAGGATCAATCAATGCAAGTCCTCTTTCTGTCTCTTT-ACGTTCTTCATCAGGACGTA 727
Query 968 GGTCTAATAGATTGGCAATAGCTCTTAGTGTAAGCCTTGGCTCTGTTGTTA-TACTAGTC 1026
| | |||| |||||| | || ||| ||||||||||||||| || ||||| | || ||
Sbjct 728 GAACAAATATATTGGCGGTTGCACTTGGTGTAAGCCTTGGCTTTGCTGTTAGT-GTAATC 786
Query 1027 CT-TGCTCTCGGGTCCTTTTGTTGGTACCGAAAGAAACAAAGAAGGCT-ACTGATCCTTA 1084
|| | |||||||| || | |||||| |||| |||||||| |||||| || ||| |||
Sbjct 787 CTCT-CTCTCGGG--CTCAT-TTGGTATCGAAGGAAACAAAAAAGGCTAAC-GATGCTTC 841
Query 1085 ACTTAAACGATAAACAAGAGGAAGGGCTT-CAAGGACTTGGG-AATCTAAGAAGCTTCAC 1142
| ||| || || |||||||||||| || | |||| ||||| |||||||||||||||||
Sbjct 842 GCATAAGTGACAAGCAAGAGGAAGGG-TTACTAGGA-TTGGGAAATCTAAGAAGCTTCAC 899
Query 1143 ATTCAGAGAACTCCATGTTTATACAGATGGTTTCAGTTCCAAGAACATTCTCGGCGCTGG 1202
|||||||||||| ||||| ||| |||||||| |||| ||||| |||||| || |||||
Sbjct 900 ATTCAGAGAACTTCATGTAGCTACGGATGGTTTTAGTTACAAGAGCATTCTTGGTGCTGG 959
Query 1203 TGGATTCGGTAATGTGTACAGAGGCAAGCTTG-GAGATGGGACAATGGTGGCAGTGAAAC 1261
||| || |||||||| |||||||| ||||| | | |||||||||||||| ||||||||||
Sbjct 960 TGGGTTTGGTAATGTCTACAGAGGAAAGCTCGTG-GATGGGACAATGGTTGCAGTGAAAC 1018
Query 1262 GGTTGAAGGATATTAATGGAACCTCAGGGGATTCACAGTTTCGTATGGAGCTAGAGATGA 1321
| |||| ||| | ||||||||||| ||| |||| |||||||||| ||||| |||||||
Sbjct 1019 GACTGAAAGATGTGAATGGAACCTCTGGGAATTCGCAGTTTCGTACCGAGCTTGAGATGA 1078
Query 1322 TTAGCTTAGCTGTTCATAAGAATCTGCTTCGGTTAATTGGTTATTGCGCAACTTCTGGTG 1381
| |||||||||||||||| |||| ||||||||||||| |||||||| || | |||| |||
Sbjct 1079 TCAGCTTAGCTGTTCATAGGAATTTGCTTCGGTTAATCGGTTATTGTGCGAGTTCTAGTG 1138
Query 1382 AAAGGCTTCTTGTTTACCCTTACATG-CCTAATGGAAGCGTCGCCTCTA-AGCTTAAATC 1439
|||| ||||||||||||||||||||| || ||||| || |||||||||| | |||||| |
Sbjct 1139 AAAGACTTCTTGTTTACCCTTACATGTCC-AATGGCAGTGTCGCCTCTAGA-CTTAAAGC 1196
Query 1440 TAAACCGGCATTGGACTGGAACATGAGGAAGAGGATAGCAATTGGTGCAGCGAGAGGTTT 1499
|||||| |||||||||||||||| ||||||| |||||| || || || || ||||||||
Sbjct 1197 TAAACCAGCATTGGACTGGAACACAAGGAAGAAGATAGCCATAGGAGCTGCAAGAGGTTT 1256
Query 1500 GTTGTATCTACATGAGCAATGTGATCCCAAGATCATTCATAGAGATGTAAAGGCAGCTAA 1559
||| |||||||| |||||||| ||||||||||| ||||| ||||||| |||||||| ||
Sbjct 1257 GTTTTATCTACACGAGCAATGCGATCCCAAGATTATTCACCGAGATGTCAAGGCAGCAAA 1316
Query 1560 TATTCTCTTAGACGAGTGCTTTGAAGCTGTTGTTGGTGACTTTGGACTCGCAAAGCTCCT 1619
|||||| |||| |||| ||||||||||||||||| || |||||||| |||||||| ||
Sbjct 1317 CATTCTCCTAGATGAGTATTTTGAAGCTGTTGTTGGGGATTTTGGACTAGCAAAGCTACT 1376
Query 1620 TAACCATGCGGATTCTCATGTCACAACTGCGGTCCGTGGTACGGTTGGCCACATTGCACC 1679
||||| | |||||| ||||||||||| || || | || || ||||| |||||||||||
Sbjct 1377 CAACCACGAGGATTCACATGTCACAACCGCTGTTAGAGGAACTGTTGGTCACATTGCACC 1436
Query 1680 TGAATATCTCTCCACTGGTCAGTCTTCTGAGAAAACCGATGTGTTTGGGTTCGGTATACT 1739
|| ||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 1437 CGAGTATCTCTCCACCGGTCAGTCATCTGAGAAAACCGATGTCTTTGGGTTCGGTATACT 1496
Query 1740 ATTGCTCGAGCTCATAACCGGACTGAGAGCTCTTGAGTTTGGTAAAACCGTTAGCCAGAA 1799
||||| |||||||| || ||| |||||||||| |||||||| || | |||||||| ||
Sbjct 1497 TTTGCTAGAGCTCATCACAGGAATGAGAGCTCTAGAGTTTGGCAAGTCTGTTAGCCAAAA 1556
Query 1800 AGGAGCTATGCTTGAATGGGTGAGGAAATTACATGAAG-AGATGAAAGTAGAGGAACTAT 1858
|||||| |||||||||||||||||||| |||| ||| | |||||||||||||| || |
Sbjct 1557 AGGAGCCATGCTTGAATGGGTGAGGAAGCTACAC-AAGGAAATGAAAGTAGAGGAGCT-T 1614
Query 1859 -TGGATCGAGAACTCGGAACTAAC-TACGATAAGATT-GAAGTTGGAGAGATGTTGCAAG 1915
| || || |||||||| || ||| ||||||| || | || |||||||||||||| ||||
Sbjct 1615 GTAGACCGGGAACTCGGGAC-AACCTACGATA-GAATAGACGTTGGAGAGATGTTACAAG 1672
Query 1916 TGGCTTTGCTATGCACACAATATCTGCCAGCTCATC-GTCCTAAAATGTCTGAAGTTGTT 1974
||||||| || ||||| || | ||| || ||||| | | || |||||||||||||| |||
Sbjct 1673 TGGCTTTACTCTGCACTCAGTTTCTTCCCGCTCA-CAGACCGAAAATGTCTGAAGTGGTT 1731
Query 1975 TTGATGCTTGAAGGCGATGGATTAGCCGAGAGATGGGCTGCTTCGCATAACCATTCACAT 2034
|||||||||||| ||||||||||| || |||||||||||||| ||| | |||||||||
Sbjct 1732 CAGATGCTTGAAGGAGATGGATTAGCAGAAAGATGGGCTGCTTCACATGATCATTCACAT 1791
Query 2035 TTCTACCATGCCAATATCTCTTTCAAGAC 2063
|||||||||||||| || |||| || |||
Sbjct 1792 TTCTACCATGCCAACATGTCTTACAGGAC 1820
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 90692873345
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5