BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G30870.1
Length=2312
Score E
Sequences producing significant alignments: (Bits) Value
Ahg491663 jgi|Araly1|491663|fgenesh2_kg.7__1096__AT4G30870.1 3371 0.0
Ahg947835 jgi|Araly1|947835|scaffold_704064.1 1103 0.0
> Ahg491663 jgi|Araly1|491663|fgenesh2_kg.7__1096__AT4G30870.1
Length=2101
Score = 3371 bits (1825), Expect = 0.0
Identities = 2010/2101 (96%), Gaps = 6/2101 (0%)
Strand=Plus/Plus
Query 42 CGAACCAAAGATCAAACCTTTGCGAGAGAATTTCCCTCTTTTTCGGCAACGAGTATATCC 101
||||||||||||||||||||||||||| ||||||||||||| | |||||||||| |||||
Sbjct 1 CGAACCAAAGATCAAACCTTTGCGAGACAATTTCCCTCTTTCTAGGCAACGAGTTTATCC 60
Query 102 AATCAGCAAGGAATTTTATGATCGCTTGATAAATTGAAACTATTTGGAGTGGGTAGTGAT 161
||||| |||||||||| ||||||| |||||||||||||||| ||||||||||||||||||
Sbjct 61 AATCATCAAGGAATTTGATGATCGTTTGATAAATTGAAACTCTTTGGAGTGGGTAGTGAT 120
Query 162 GGATGACGAGAGACGGGTACTGTGCCCTGAGAACCGAGGTTTAGCGGCTTATGTGTTGCA 221
|||||||||||||||||||||||| |||||||||| || |||||||||||||||||||||
Sbjct 121 GGATGACGAGAGACGGGTACTGTGTCCTGAGAACCAAGATTTAGCGGCTTATGTGTTGCA 180
Query 222 GAAGAAGCAAGAATACGCAGAAAAGCCCAAAGGCTTGTCGGAAAATCTGGAGAGGACATT 281
||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 181 GAAGAAGCAAGAACACGCAGAAAAACCCAAAGGTTTGTCGGAAAATCTGGAGAGGACATT 240
Query 282 TGTTAAGGGGTATAGGAGTGTCTGCGACGCCAAGGATCCCATTAACACACTCAAAGACTT 341
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TGTTAAGGCGTATAGGAATGTCTGCGACGCCAAGGATCCCATTAACACACTCAAAGACTT 300
Query 342 GTCGCAGATCAAGGGCTTTGGCAAGTGGATGGTTAAGCTCATGAAAGGATATTTTGATAC 401
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GTCGCAGATCAAGGGCTTTGGCAAGTGGATGGTTAAGCTCATGAAAGGATATTTTGATAC 360
Query 402 TGCTGTTGAAAGTTCTGAGCAAGAAGATTTACCTGATAATCGTGCTGGGAAAAAGGCCAA 461
|| || | |||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 361 TGGTGCTCAAAGTTCTGAGCAAGAAGATTTACCTGATAGGCGTGCTGGGAAAAAGGCTAA 420
Query 462 TGGaaaaaaaCGGTACATTCCGCAAAGAAATTCAGTGGGATATGCATTACTAATAACGTT 521
|||||||||||| |||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 421 TGGAAAAAAACGCTACATTCCGCAAAGAAATTCTGTGGGCTATGCATTACTAATAACGTT 480
Query 522 GCACAGAAGGACTACAAATGGGAAAGAATTCATGCGTAAACAAGAGCTTATTGATGCTGC 581
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 GCACAGGAGGACTACAAATGGGAAAGAATTCATGCGTAAACAAGAGCTTATTGATGCTGC 540
Query 582 TGACGCGAATGGGCTATCACACGCTCCTGTTGGGCCAGAGAAAGGGAAAGGGAAAGCAGG 641
|||||| | |||||| |||||| |||||||||||||||||||||| ||||||||||||||
Sbjct 541 TGACGCTAGTGGGCTCTCACACTCTCCTGTTGGGCCAGAGAAAGGAAAAGGGAAAGCAGG 600
Query 642 ACTTGGACACTCTAAGAGGGAGTGGTATAGTGGATGGAGCTGCATGACCACTCTTATACA 701
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 601 ACTTGGACACTCTAAGAGGGAGTGGTATAGTGGATGGAGCTGCATGACCACACTTATACA 660
Query 702 GAAGGGATTAGTGGTGAAATCTAGCAACCCAGCAAAGTACATGCTGACAGTTGAAGGTCG 761
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 661 GAAGGGATTGGTGGTGAAATCTAGCAACCCAGCAAAGTACATGCTGACAGTAGAAGGTCG 720
Query 762 GGAAGTTGCAAATGAGTGTATCCTGCGATCTGGATTACCTGATTCAGTTGATATCTTATC 821
||||||||||||||| |||||| ||||||||||||||||| |||||||||| ||||||||
Sbjct 721 GGAAGTTGCAAATGAATGTATCGTGCGATCTGGATTACCTAATTCAGTTGACATCTTATC 780
Query 822 TGTTGATGAAATGGATCCTACACCGCAAGCAAAGAAAACACCTAATCAAAATCCCACCTG 881
|| ||||| ||| ||||||||||||||||| ||||||||||||| |||||||| |||||
Sbjct 781 TGATGATGGAATTTATCCTACACCGCAAGCACAGAAAACACCTAACCAAAATCCTACCTG 840
Query 882 TTCGTTTACCATGAGAGAAGAACTTCCATATGTCGATCCAAGATGTAGGGCACAATCAGC 941
||| ||||||||||||||||||| |||||||||||||| |||| |||||||||||||||
Sbjct 841 TTCTTTTACCATGAGAGAAGAACAGCCATATGTCGATCCCAGATCTAGGGCACAATCAGC 900
Query 942 CATTCCAAGCGATATTCTTGAAAAGTTTACTCCGTTTGGTTATTCGAAGGAACAAGTCGT 1001
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 901 CATTCCAAGCGATATTCTTGAAAAGTTTACACCGTTTGGTTATTCAAAGGAACAAGTCGT 960
Query 1002 TGCTGCATTCAGAGAGGTTTCAGATGGATCTGGGGACAAAGATCCATCAACTCTCTGGCT 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 TGCTGCATTCAGAGAGGTTTCAGATGGATCTGGGGACAAAGATCCATCAACTCTCTGGCT 1020
Query 1062 CTCTGTAATGTGCCATCTTCGTCAAGCAGAGGTTTATAATTCCTGTCCGGACTCGAGAAA 1121
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1021 CTCTGTAATGTGCCATCTTCGTCAAGCAGAGGTTTATAATTCCTGTCCGGACTCAAGAAA 1080
Query 1122 TAGTA-AAAAGGATTCATCAGGACCTTTTAAATCACAAATTCGTCAAGTTGATCTTGAGG 1180
||| | ||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1081 TAGAAGAAAAG-ATTCATCAGGACCTTCTAAATCACAAACTCGTCAAGTTGATCTTGAGG 1139
Query 1181 GATCTCGTGCTAAGAAGTTCCGCTCTTGCAATGATGGATCCACCTTAAATCCATGTTCAT 1240
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 1140 GATCTCGTGCTAAGAAGTTCCGCTCTTGCAATGATGGACCCACCTTAAATCCATGTACAT 1199
Query 1241 CAGGTTCAAGTCATGCTGTGAAAGCCTGCTCATCTTCTTTGGCATCAGATGGAACCAAAG 1300
| || || |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1200 CCGGATCGAGTCATGCTGTGAAAGCCTGCTCATCTTCTTTGGTATCAGATGGAACCAAAG 1259
Query 1301 GAATAACAAATATTCCACGCCTCCCTCCTCTTCAATTTGGAGAAACGTTTGAGGAAGCAT 1360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1260 GAATAACAAATGTTCCACGCCTCCCTCCTCTTCAATTTGGAGAAACGTTTGAGGAAGCAT 1319
Query 1361 ATGATGTGATCTTGATACTGGATGATCGAGAAAAGTTTGCCACCAAAGGATCACGATCCA 1420
||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||||
Sbjct 1320 ATGATGTGATCTTGATATTGGATGATCGAGAAAAGTTTGCCACGAAGGGATCACGATCCA 1379
Query 1421 GGAATATAGTTGAAAACATATGCTCTGAATTCAACATCAAGATTGAGGTTAGACGATTAC 1480
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1380 GGAATATAGTTGATAACATATGCTCTGAATTCAATATCAAGATTGAGGTTAGACGATTAC 1439
Query 1481 CAGTCGGGGATTGTATATGGATTGCTCGGCATAAGTACCTTGAGACTGAATATGTTCTAG 1540
|||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 1440 CAGTTGGGGATTGTATCTGGATTGCTCGGCATAAGTACTTTGAGACTGAATATGTTCTGG 1499
Query 1541 ACTTTATTGCTGAGAGGAAGAACGTTGATGATATGCGCTCATCAATTAGAGATAATCGCT 1600
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1500 ACTTTATTGCTGAGAGGAAGAACGTGGATGATATGCGCTCATCAATTAGAGATAATCGCT 1559
Query 1601 ACAGAGACCAAAAACTTAGACTTCAGAGATCGGGATTCAAGAAGCTCATATACATTCTTG 1660
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1560 ACAGAGACCAAAAACTTAGACTTCAGAGATCGGGATTCAAGAAGCTCATATATATTCTTG 1619
Query 1661 AAGGGGATCCAAACCATTCTGATGCAGCAGAAAGCATTAAAACAGCTTGTTTCACGACAG 1720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1620 AAGGGGATCCAAACCATTCTGATGCAGCAGAAAGCATTAAAACAGCTTGTTTCACGACAG 1679
Query 1721 AGATTCTGGAGGGATTTGATGTGCTGAGGACACACGGGCTGGGTGAGACGCTAAGAAAAT 1780
|||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 1680 AGATTCTGGAGGGATTTGATGTGCTGAGGACACAAGGGCTGGGTGAGACGCTAAGGAAAT 1739
Query 1781 ACGGCTACCTCACGAAATCAATATATCAATACTACAAGTTACGGGTGAATGATAATGACC 1840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1740 ACGGCTACCTCACGAAATCAATATATCAATACTACAAGTTACGGGTGAATGATAATGACC 1799
Query 1841 AGAGCAAAGGCGCAGCCTCATGTCCTTCTTTTGATAGTTTTGTCAAAAGGTGTCAAGACC 1900
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1800 AGAGCAAAGTCGCAGCCTCGTGTCCTTCTTTTGATAGTTTTGTCAAAAGGTGTCAAGACC 1859
Query 1901 TTGATAAAATGACAATCAGCGATGTATTTGCCATTCAGCTAATGCAGGTCCCGCAGGTAA 1960
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 1860 TTGATAAAATGACAATCAGCGATGTATTTGCCATTCAGCTTATGCAGATCCCGCAGGTAA 1919
Query 1961 CGGAGGAAATTGCCATAGCGGTTCTTGATATGT-ACCCAACGCTTTTGTCTCTTGCTTCT 2019
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1920 CGGAGGAAATTGCCATAGCGGTTCTTGATA-GTTACCCAACGCTTTTGTCTCTTGCTTCT 1978
Query 2020 GCCTATTCTCATCTAGAAGCAGA-TGTCTCGGCGCAAGAAGAGATGTTGAGAAATAGAAG 2078
|| |||||||||||||||| || |||||| |||||||||||||||||||||||||||||
Sbjct 1979 GCGTATTCTCATCTAGAAGG-GAATGTCTCTGCGCAAGAAGAGATGTTGAGAAATAGAAG 2037
Query 2079 CAACAATGTAATATGTGCATCAGCTAGTAAGAATATATTCAAGTTAGTTTGGGGTGAATG 2138
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2038 TAACAATGTAATCTGTGCATCAGCTAGTAAGAATATATTCAAGTTAGTTTGGGGTGAATG 2097
Query 2139 A 2139
|
Sbjct 2098 A 2098
> Ahg947835 jgi|Araly1|947835|scaffold_704064.1
Length=2073
Score = 1103 bits (597), Expect = 0.0
Identities = 851/969 (88%), Gaps = 35/969 (4%)
Strand=Plus/Plus
Query 1163 GTCAAGTTGATCTTGAGGGATC--TCGTGCTAAGAAGTTCCGCTCTTGCAATGATGGATC 1220
|||||||||||||||||||||| || | ||||||| ||||| |||||||||| ||||||
Sbjct 842 GTCAAGTTGATCTTGAGGGATCTTTC-T-CTAAGAAATTCCGTTCTTGCAATGTTGGATC 899
Query 1221 CACCTTAAATCCATGTTCATCAGGTTCAAGTCATGCTGTGAAAGCCTGCTCATCTTCTTT 1280
|||||||||||||||||| || ||||| || ||||| ||||||||||||||||||| ||
Sbjct 900 CACCTTAAATCCATGTTCTTCCGGTTCGAGCCATGCCATGAAAGCCTGCTCATCTTCCTT 959
Query 1281 GGCATCAGATGGAACCAAAGGAATAACAAATATTCCACGCCTCCCTCCTCTTCA-ATTTG 1339
||| || ||||||||| ||||| | |||| |||| ||||||| || |||||| | ||| |
Sbjct 960 GGCGTCCGATGGAACCGAAGGAGTGACAACTATTACACGCCTTCCACCTCTT-AGATTCG 1018
Query 1340 GAGAAACGTTTGAGGAAGCATATGATGTGATCTTGATACTGGATGATCGAGAAAAGTTTG 1399
||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1019 GAGAAGCGTTTGAGGAAGCATATGATGTGATCTTGTTACTGGATGATCGAGAACAGTTTG 1078
Query 1400 CCACCAAAGGATCACGATCCAGGAATATAGTTGAAAACATATGCTCTGAATTCAACATCA 1459
||||||| |||||||| |||| || ||||| |||||| |||||| |||||| ||||
Sbjct 1079 CCACCAAGGGATCACGGTCCA----TA--GTTGATAACATACGCTCTGTATTCAAGATCA 1132
Query 1460 AGATTGAGGTTAGACGATTACCAGTCGGGGATTGTATATGGATTGCTCGGCATAAGTACC 1519
|||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct 1133 AGATTGAGGTTAGAAGATTACCAGTTGGGGATTGTATCTGGATTGCTCGGCATAAGTACC 1192
Query 1520 TTGA-GACTGAATATGTTCTAGACTTTATTGCTGAGAGGAAGAACGTTGATGATATGCGC 1578
| || |||||||||||| |||||||||| |||| |||||||||||||||||||||||
Sbjct 1193 AACAAGA-TGAATATGTTCTGGACTTTATTGTTGAGCGGAAGAACGTTGATGATATGCGC 1251
Query 1579 TCATCAATTA-GAGATAATCGCTACAGAG-ACCAAAAACTTAGACTTCAGAGATCGGGAT 1636
|| ||||||| | ||||||||||||| || ||||||||||||||||||||||||| |||
Sbjct 1252 TCGTCAATTATG-GATAATCGCTACA-AGGACCAAAAACTTAGACTTCAGAGATCAGGAA 1309
Query 1637 TCAAGAAGCTCATATACATTCTTGAAGGGGATCCAAACCATTCT-GATGCAGCAGAAAGC 1695
|||||||||| |||||||||||||||||||| |||||||| ||| | | ||||||||||
Sbjct 1310 TCAAGAAGCTGATATACATTCTTGAAGGGGACCCAAACCAGTCTAG-TACAGCAGAAAGT 1368
Query 1696 ATTAAAACAGCTTGTTTCACGACAGAGATTCTGGAGGGATTTGATGTGCTGAGGACACAC 1755
|||||||| ||||||||||| || |||||| |||| ||||||||||||||||||||| ||
Sbjct 1369 ATTAAAACGGCTTGTTTCACAACGGAGATTTTGGAAGGATTTGATGTGCTGAGGACAAAC 1428
Query 1756 GGGCTGGGTGAGACGCTAAGAAAATACGGCTACCTCACGAAATCAATATATCAATACTAC 1815
||||||||||||||| ||||||||||||| || ||||| ||||||||||| |||||||||
Sbjct 1429 GGGCTGGGTGAGACGTTAAGAAAATACGGTTATCTCACTAAATCAATATACCAATACTAC 1488
Query 1816 AAGTTACGGGTGAATGATAATGACCAGAGCAAAGGCGCAGCCTCATGTCCTTCTTTTGAT 1875
|||| ||||||||||||| ||||||||||||| || | | |||||||||| |||
Sbjct 1489 AAGTCACGGGTGAATGAT---GACCAGAGCAAAGTTGC-G--T---GTCCTTCTTTCGAT 1539
Query 1876 -AGTTTTGTCAAAAGGTGTCAAGACCTTGATAAAATGACAATCAGCGATGTATTTGCCAT 1934
| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct 1540 GA-TTTTGTCAAAAGGTGTCAAGACCTTGGTAAAATGACAATCAGCGACGTATTTGCCAT 1598
Query 1935 TCAGCTAATGCAGGTCCCGCAGGTAACGGAGGAAATTGCCATAGCGGTTCTTGATATGTA 1994
|||||| |||||| | ||||||||||| ||||||||||||||||| |||||||||| |||
Sbjct 1599 TCAGCTTATGCAGATACCGCAGGTAACAGAGGAAATTGCCATAGCTGTTCTTGATAAGTA 1658
Query 1995 CCCAACGCTTTTGTCTCTTGCTTCTGCCTATTCTCATCTAGAAGCAGA-TGTCTCGGCGC 2053
| ||| ||| |||||||||||||||||||||| | ||||| | || |||||||||||
Sbjct 1659 CAAAACACTTCGGTCTCTTGCTTCTGCCTATTCTAAACTAGATGG-GAATGTCTCGGCGC 1717
Query 2054 AAGAAGAGATGTTGAGAAAT-AGAAGCAACAATGTAATATGTGCATCAGCTAGTAAGAAT 2112
||||||| ||| || | ||| | |||||||||||||||||||||||||||||||||||||
Sbjct 1718 AAGAAGAAATGCTGCGGAATCA-AAGCAACAATGTAATATGTGCATCAGCTAGTAAGAAT 1776
Query 2113 ATATTCAAG 2121
|||| ||||
Sbjct 1777 ATATACAAG 1785
Score = 795 bits (430), Expect = 0.0
Identities = 690/814 (85%), Gaps = 23/814 (3%)
Strand=Plus/Plus
Query 139 AACTATTTGGAGTGGGTAGTGATGGATGACGAGAGACGGGTACTGTGCCCTGAGAACCGA 198
|||| ||||||||| |||||||||| |||| ||||| |||||||||| | |||||| |
Sbjct 1 AACTCTTTGGAGTGTGTAGTGATGGTTGACCAGAGAAGGGTACTGTGTTCACAGAACCAA 60
Query 199 GGTTTAGCGG-CTTATGTGTTGCAGAAGAAGCAAGAATACGCAGAAAAGCCCAAAGGCTT 257
|||||||||| | |||||||||||||||||||||||| ||| ||| ||||| || || ||
Sbjct 61 GGTTTAGCGGAC-TATGTGTTGCAGAAGAAGCAAGAACACGAAGATAAGCCTAAGGGTTT 119
Query 258 GTCGGAAAATCTGGAGAGGACATTTGTTAAGGGGTATAGGAGTGTCTGCGACGCCAAGGA 317
||| |||||||||||||||||||||||||| | ||||| | ||| || |||||||||||
Sbjct 120 GTCAGAAAATCTGGAGAGGACATTTGTTAAAGCCTATAGAAATGTATGTGACGCCAAGGA 179
Query 318 TCCCATTAACACACTCAAAGACTTGTCGCAGATCAAGGGCTTTGGCAAGTGGATGGTTAA 377
| | ||| |||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 180 TTCAATTGACACCCTCAAAGACTTGTCGAAGATCAAGGGCTTTGGCAAGTGGATGGTTAA 239
Query 378 GCTCATGAAAGGATATTTTGATACTGCTGTTGAAAGTTCTGAGCAAGAAGATTTACCT-G 436
||||||| ||| |||||||| | | | || | || | |||| | ||||| |
Sbjct 240 GCTCATGCAAGAATATTTTG-T--TAC---TG---G-TC----C-TGAAGCTGTACCTGG 284
Query 437 ATAATCGTGCTGGGAAAAAGGCCAATGGaaaaaaaCGGTACATTCCGCAAAGAAATTCAG 496
| ||||||||||||||||||||||| |||| | ||| |||| |||| ||||||||| |
Sbjct 285 A-AATCGTGCTGGGAAAAAGGCCAAGGGAACAGAACCCTACAGGCCGCGAAGAAATTCTG 343
Query 497 TGGGATATGCATTACTAATAACGTTGCACAGAAG-GACTACAAATGGGAAAGAATTCATG 555
|| ||||||||||||||||| |||||||| || |||| |||||||||||| |||||||
Sbjct 344 CGGCTTATGCATTACTAATAACATTGCACAG-AGAGACTGCAAATGGGAAAGCATTCATG 402
Query 556 CGTAAACAAGAGCTTATTGATGCTGCTGACGCGAATGGGCTATCACACGCTCCTGTTGGG 615
||||||||||||||||| || ||||||||||| | |||||| ||||||| |||| |||
Sbjct 403 CGTAAACAAGAGCTTATGGACGCTGCTGACGCTAGTGGGCTCTCACACGTTCCTATTGCA 462
Query 616 CCAGAGAAAGGGAAAGGGAAAGCAGGACTTGGACACTCTAAGAGGGAGTGGTATAGTGGA 675
||||||||||| ||||| |||| |||| ||||| |||||||||||||||||||||| ||
Sbjct 463 CCAGAGAAAGGTAAAGGAAAAGTAGGAGTTGGAAACTCTAAGAGGGAGTGGTATAGCGGG 522
Query 676 TGGAGCTGCATGACCACTCTTATACAGAAGGGATTAGTGGTGAAATCTAGCAACCCAGCA 735
||||||||||||| || |||||| |||||||||| |||||||||||||||||||| |||
Sbjct 523 TGGAGCTGCATGAAGACACTTATAGAGAAGGGATTGGTGGTGAAATCTAGCAACCCGGCA 582
Query 736 AAGTACATGCTGACAGTTGAAGGTCGGGAA-GTTGCAAATGAGTGTATCCTGCGATCTGG 794
||||||||||||||||||||||||||| || || || |||| |||||| ||||||||||
Sbjct 583 AAGTACATGCTGACAGTTGAAGGTCGG-AATGTAGCTGATGACTGTATCGTGCGATCTGG 641
Query 795 ATTACCTGATTCAGTTGATATCTTATCTGTTGATGAAATGGATCCTACACCGCAAGCAAA 854
||||| | |||| ||||| |||||||||| |||||||||||||||| || |||||||||
Sbjct 642 ATTACTTAATTCGGTTGACATCTTATCTGATGATGAAATGGATCCTGTACAGCAAGCAAA 701
Query 855 GAAAACACCTAATCAAAATCCCACCTGTTCGTTTACCATGAGAGAAGAACTTCCATATGT 914
| | |||||||||||||| | |||| || ||||||||||||||||||| || |||||
Sbjct 702 TATACCACCTAATCAAAATTCAACCTCCTCTTTTACCATGAGAGAAGAACAGCCGTATGT 761
Query 915 CGATCCAAGATGTAGGGCACAATCAGCCATTCCA 948
|||| |||||| |||| ||||||| ||||||||
Sbjct 762 CGATGCAAGATCCAGGGGACAATCATCCATTCCA 795
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 87074300070
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5