BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G30910.1 Length=2021 Score E Sequences producing significant alignments: (Bits) Value Ahg889026 jgi|Araly1|889026|Al_scaffold_0007_1012 2639 0.0 Ahg944893 jgi|Araly1|944893|scaffold_701122.1 2608 0.0 Ahg481277 jgi|Araly1|481277|fgenesh2_kg.4__337__AT2G24200.1 1349 0.0 > Ahg889026 jgi|Araly1|889026|Al_scaffold_0007_1012 Length=1749 Score = 2639 bits (1429), Expect = 0.0 Identities = 1648/1754 (94%), Gaps = 13/1754 (1%) Strand=Plus/Plus Query 68 ATGGCGGTCACTTTGGTAACGT-C-AT-GTGcttcttcttctcgcttccatttccgctct 124 |||||||||||||||||||||| | | | |||||||||||||||||||||||||||| Sbjct 1 ATGGCGGTCACTTTGGTAACGTCCTTTACTTCTTCTTCTTCTCGCTTCCATTTCCGCTCC 60 Query 125 ttctcctcttctccgtcgtctctctcctcttGTTTCGTACGATTCCAGTTGCTGTCTCGC 184 |||||||||||||| ||||||||||| ||||||||||| |||||||||| || ||||||| Sbjct 61 TTCTCCTCTTCTCCTTCGTCTCTCTCTTCTTGTTTCGTCCGATTCCAGTCGCCGTCTCGC 120 Query 185 CTTAGAGTCTCTTTCGCCATCACGCCTCTCTACTGCTCTTCTAAAGCCACGGCTCATACA 244 |||| |||| ||||||| | |||||||||||||| ||||||||||||| | |||||||| Sbjct 121 CTTAAAGTCGCTTTCGCGGTTACGCCTCTCTACTGTTCTTCTAAAGCCATGTCTCATACA 180 Query 245 ATCGCACACGCTACTCTTGGCCTTACTCAGGCCAACTCCGTCGATCATCCTAAGATCTCA 304 || |||||||||||||| ||||| |||||||| |||||||| |||||||||||||||||| Sbjct 181 ATAGCACACGCTACTCTCGGCCTCACTCAGGCTAACTCCGTTGATCATCCTAAGATCTCA 240 Query 305 TTTTCCGGGAAGGAGATTGACGTGACTGAATGGAAAGGTGATATACTCGCTGTTGGAGTG 364 ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct 241 TTTTCCGGGAAGGAGATCGACGTGACGGAATGGAAAGGTGATATACTCGCGGTTGGAGTG 300 Query 365 ACGGAGAAAGATATGGCTAAGGATGCCAACTCCAAGTTCGAGAACCCCATACTGAAGAAG 424 | ||||||||||||| ||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 301 ATGGAGAAAGATATGACTAAGGATGCCAACTCCAAGTTCGAAAACCCGATACTGAAGAAG 360 Query 425 CTTGATGCCCACTTGGGTGGACTTCTAGCTGATGTCTCGGCTGAGGAAGATTTTTCTGGG 484 |||||||| ||||||||||||||| ||||||||||||| |||||||||||||||| ||| Sbjct 361 CTTGATGCTCACTTGGGTGGACTTTTAGCTGATGTCTCTTCTGAGGAAGATTTTTCCGGG 420 Query 485 AAACCTGGCCAGTCA-ACAGTTCTTAGGCTTCCGGGTCTCGGCTCAAAGCGGGTCGGTTT 543 ||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||| Sbjct 421 AAACCTGGCCAGT-ATACAGTTCTTAGGCTTCCGGGTCTCGGGTCAAAGCGGGTCGGTTT 479 Query 544 GATTGGTCTTGGAAAATCTGCTTCAACCCCTTCGGCTTTTCAGAGTCTTGGTGAGGCTGT 603 ||||||||| ||||||||||||||| | ||||| |||||||||||||| ||||||||||| Sbjct 480 GATTGGTCTAGGAAAATCTGCTTCATCTCCTTCCGCTTTTCAGAGTCTCGGTGAGGCTGT 539 Query 604 TGCTGCAGCTGCTAAAGCTTCTCAAGCTAGCAGTGTTGCAGTTGTTCTCGCCTCCTCTGA 663 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct 540 TGCTGCAGCTGCTAAAGCTTCTCAAGCTACCAGTGTTGCAGTTGTTCTCGCCTCCTCAGA 599 Query 664 GAGTTTTTCTGATGAATCTAAGCTCAGTTCTGCTTCAGATATAGCTTCAGGCACAGTGCT 723 |||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct 600 GAGTGTTTCTGATGAATCTAAACTCAGTTCTGCTTCAGCTATAGCTTCAGGCACAGTGCT 659 Query 724 TGGTTTGTTTGAAGACAGTCGGTATAAGTCTGAGTCAAAGAAACCATCTCTCAAATCTGT 783 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 660 TGGTTTGTTTGAAGACAGCCGGTATAAGTCTGAGTCAAAGAAACCATCTCTCAAATCTGT 719 Query 784 AGTAT-TCATTGGCTTTGGCACTGGACCTGAACTAGAGAACAAGCTTAAGTATGCTGAAC 842 | || |||||||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct 720 -GGATATCATTGGCTTTGGCACTGGACCTGAACTAGAGGAGAAGCTTAAGTATGCTGAAC 778 Query 843 ATGTTTCTTATGGCGTAATTTTCACGAAAGAACTTGTTAATTCACCAGCCAATGTTCTCT 902 ||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct 779 ATGTTTCTTATGGCGTAATTTTCGGGAAAGAACTTGTTAATTCTCCAGCCAATGTTCTCA 838 Query 903 CCCCTGCCGTACTAGCTGAGGAAGCCTCGAATCTGGCTTCCATGTACAGTAATGTCATGA 962 |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| Sbjct 839 CCCCTGCCGTACTAGCTGAGGAAGCCTCAAATCTGGCTTCCATGTACAGTGATGTCATGA 898 Query 963 CTGCAAACATCTTGAAAGAGGAGCAATGCAAAGAATTGAAGATGGGTTCATATCTTGCTG 1022 |||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||| Sbjct 899 CTGCAAACATCTTGAACGAGGAACAATGCAAAGAGCTGAAGATGGGTTCATATCTTGCTG 958 Query 1023 TAGCTGCTGCTTCAGCTAATCCACCTCATTTCATCCACCTTATCTACAAACCTTCTAGTG 1082 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 959 TAGCTGCTGCTTCAGCTAATCCACCTCATTTCATCCACCTTATCTACAAACCTTCTAGTG 1018 Query 1083 GCCCTGTTAAAACCAAACTTGCTCTTGTTGGAAAAGGATTGACATTTGACAGCGGTGGCT 1142 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1019 GCCCTGTTAAAACCAAACTTGCTCTTGTTGGGAAAGGATTGACATTTGACAGCGGTGGCT 1078 Query 1143 ACAACATTAAAATTGGGCCTGA-ATTAATAATTGAGCTCATGAAAATCGATGTGGGAGGT 1201 |||||||||| ||||||||||| || | |||||||||||||||||||||||||||||||| Sbjct 1079 ACAACATTAAGATTGGGCCTGACATGA-TAATTGAGCTCATGAAAATCGATGTGGGAGGT 1137 Query 1202 TCAGCTGCTGTTCTTGGCGCTGCAAAAGCCATTGGTGAAATTAAGCCTCCCGGTGTTGAG 1261 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1138 TCAGCTGCTGTTCTTGGCGCTGCAAAAGCCATTGGTCAAATTAAGCCTCCCGGTGTTGAG 1197 Query 1262 GTGCACTTTATTGTCGCAGCTTGTGAGAATATGATAAGTGGTACCGGAATGAGACCTGGA 1321 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1198 GTGCACTTTATTGTCGCAGCTTGTGAGAATATGATAAGTGGTACCGGAATGAGACCTGGA 1257 Query 1322 GATGTCATCACAGCCTCAAACGGGAAGACAATTGAGGTCAACGACACCGATTCTGAAGGT 1381 ||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||| Sbjct 1258 GATGTCATCACAGCCTCAAACGGAAAGACAATTGAGGTCAACAACACCGATGCTGAAGGT 1317 Query 1382 CGGCTAACACTTGCAGATGCTCTAGTTTATGCTTGCAACCAGGGTGTCGATAAGATTGTT 1441 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1318 CGACTAACACTTGCAGATGCTCTAGTCTATGCTTGCAACCAGGGTGTCGATAAGATTGTT 1377 Query 1442 GACATTGCAACATTGACCGGGGAGATTATTGTTGCTCTTGGACCATCAATGGCAGGCATG 1501 ||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||| Sbjct 1378 GACCTTGCAACATTGACTGGGGCTATTATTGTTGCTCTTGGACCATCAATGGCAGGCATG 1437 Query 1502 TACACAGCTAGTGATGAGCTTGCCAAGGAGGTAATTGCTGCATCACAGAGGAGTGGAGAG 1561 || ||||||||||||||| |||| |||||||||| |||||||||| | |||||||| ||| Sbjct 1438 TATACAGCTAGTGATGAGTTTGCAAAGGAGGTAACTGCTGCATCAGAAAGGAGTGGCGAG 1497 Query 1562 AAGTTATGGAGAATGCCTATGGAAGAGAGTTATTGGGAGATGATGAAGTCAGGTGTTGCA 1621 ||||||||||||||||||||||||||||| || |||||||||||||||||| |||| ||| Sbjct 1498 AAGTTATGGAGAATGCCTATGGAAGAGAGGTACTGGGAGATGATGAAGTCAAGTGTGGCA 1557 Query 1622 GATATGGTTAACTTTGGAGGCCGTGCAGGTGGAT-CCATCACCGCAGCTCTCTTTTTGAA 1680 |||||||||||||| |||||||||||||||| || |||||||||| |||||||| ||||| Sbjct 1558 GATATGGTTAACTTGGGAGGCCGTGCAGGTG-ATTCCATCACCGCGGCTCTCTTCTTGAA 1616 Query 1681 ACGGTTTGT-TAGCGAGAATGTTGAGTGGTTGCACATAGATATGGCTGGACGGGTGTGGA 1739 || |||||| | ||||||| ||||||||| ||||||||||||||||||||| ||||||| Sbjct 1617 ACAGTTTGTGT-GCGAGAAGGTTGAGTGGATGCACATAGATATGGCTGGACCAGTGTGGA 1675 Query 1740 ACGAGAAGAAGAAAGCTGCGACTGGGTTTGGAGTTGCGACACTTGTTGAGTGGGTACAGA 1799 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| Sbjct 1676 ACGAGAAGAAGAAAGCTGCGACTGGTTTTGGAGTTGCGACACTCGTTGAGTGGGTACAGA 1735 Query 1800 ACAATTCTTCTTAA 1813 |||||||||||||| Sbjct 1736 ACAATTCTTCTTAA 1749 > Ahg944893 jgi|Araly1|944893|scaffold_701122.1 Length=1792 Score = 2608 bits (1412), Expect = 0.0 Identities = 1654/1772 (93%), Gaps = 11/1772 (1%) Strand=Plus/Plus Query 46 AAGCTCAGTGGAGACTTCTCAAATGGCGGTCACTTTGGTAACGT-C-ATG-TGcttcttc 102 ||||||||||| | |||||||||||| |||||||||||||||| | || | ||||||| Sbjct 1 AAGCTCAGTGG-G-TTTCTCAAATGGCCGTCACTTTGGTAACGTCCTTTGCTTCTTCTTC 58 Query 103 ttctcgcttccatttccgctctttctcctcttctccgtcgtctctctcctcttGTTTCGT 162 ||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct 59 TTCTCGCTTCCATTTCCGCTCCTTCTCCTCTTCTCCTTCGTCTCTCTCTTCTTGTTTCGT 118 Query 163 ACGATTCCAGTTGCTGTCTCGCCTTAGAGTCTCTTTCGCCATCACGCCTCTCTACTGC-T 221 ||||||||||||| ||||||||||||| || |||| ||| ||||||||||||||| | | Sbjct 119 CCGATTCCAGTTGCCGTCTCGCCTTAGACTCGCTTTTGCCGTCACGCCTCTCTACT-CTT 177 Query 222 CTTCTAAAGCCACGGCTCATACAATCGCACACGCTACTCTTGGCCTTACTCAGGCCAACT 281 |||||||||||| |||||||||||||||||| |||||||| ||||||||||| ||||||| Sbjct 178 CTTCTAAAGCCATGGCTCATACAATCGCACAAGCTACTCTCGGCCTTACTCATGCCAACT 237 Query 282 CCGTCGATCATCCTAAGATCTCATTTTCCGGGAAGGAGATTGACGTGACTGAATGGAAAG 341 ||||||||||||| |||||||||||||||||||||||||| |||||||| |||||||||| Sbjct 238 CCGTCGATCATCCAAAGATCTCATTTTCCGGGAAGGAGATCGACGTGACGGAATGGAAAG 297 Query 342 GTGATATACTCGCTGTTGGAGTGACGGAGAAAGATATGGCTAAGGATGCCAACTCCAAGT 401 ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| Sbjct 298 GTGATATACTCGCGGTTGGAGTGACGGAGAAAGATATGGCTAAGGATGTGAACTCCAAGT 357 Query 402 TCGAGAACCCCATACTGAAGAAGCTTGATGCCCACTTGGGTGGACTTCTAGCTGATGTCT 461 |||| ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| Sbjct 358 TCGAAAACCCCATATTGAAGAAGCTCGATGCTCACTTGGGTGGACTTCTAGCTGATGTCT 417 Query 462 CGGCTGAGGAAGATTTTTCTGGGAAACCTGGCCAGTCAACAGTTCTTAGGCTTCCGGGTC 521 | |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 418 CTTCTGAGGAAGATTTTTCCGGGAAACCTGGCCAGTCAACAGTTCTTAGGCTTCCGGGTC 477 Query 522 TCGGCTCAAAGCGGGTCGGTTTGATTGGTCTTGGAAAATCTGCTTCAACCCCTTCGGCTT 581 |||| |||||||||||||||||||||||||| ||||||||||||||| | |||||||||| Sbjct 478 TCGGGTCAAAGCGGGTCGGTTTGATTGGTCTAGGAAAATCTGCTTCATCTCCTTCGGCTT 537 Query 582 TTCAGAGTCTTGGTGAGGCTGTTGCTGCAGCTGCTAAAGCTTCTCAAGCTAGCAGTGTTG 641 |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 538 TTCAAAGTCTTGGTGAGGCTGTTGCTGCAGCTGCTAAAGCTTCTCAAGCTAGTAGTGTTG 597 Query 642 CAGTTGTTCTCGCCTCCTCTGAGAGTTTTTCTGATGAATCTAAGCTCAGTTCTGCTTCAG 701 |||||||||| || ||||| |||||| ||||||||||||| ||||||||||||||||||| Sbjct 598 CAGTTGTTCTTGCATCCTCAGAGAGTGTTTCTGATGAATCCAAGCTCAGTTCTGCTTCAG 657 Query 702 ATATAGCTTCAGGCACAGTGCTTGGTTTGTTTGAAGACAGTCGGTATAAGTCTGAGTCAA 761 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 658 CTATAGCTTCAGGCACAGTGCTTGGTTTGTTTGAAGACAGCCGGTATAAGTCTGAGTCAA 717 Query 762 AGAAACCATCTCTCAAATCTGTAGTAT-TCATTGGCTTTGGCACTGGACCTGAACTAGAG 820 |||||||||||||||||||||| | || |||||||||||||||||||||||||||||||| Sbjct 718 AGAAACCATCTCTCAAATCTGT-GGATATCATTGGCTTTGGCACTGGACCTGAACTAGAG 776 Query 821 AACAAGCTTAAGTATGCTGAACATGTTTCTTATGGCGTAATTTTCACGAAAGAACTTGTT 880 | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 777 GAGAAGCTTAAGTATGCTGAACATGTTTCTTATGGCGTAATTTTCGGGAAAGAACTTGTT 836 Query 881 AATTCACCAGCCAATGTTCTCTCCCCTGCCGTACTAGCTGAGGAAGCCTCGAATCTGGCT 940 ||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct 837 AATTCTCCAGCCAATGTTCTCACCCCTGCCGTACTAGCTGAGGAAGCCTCAAATCTGGCT 896 Query 941 TCCATGTACAGTAATGTCATGACTGCAAACATCTTGAAAGAGGAGCAATGCAAAGAATTG 1000 |||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| || Sbjct 897 TCCATGTACAGTGATGTCATGACTGCAAACATCTTGAACGAGGAACAATGCAAAGAGCTG 956 Query 1001 AAGATGGGTTCATATCTTGCTGTAGCTGCTGCTTCAGCTAATCCACCTCATTTCATCCAC 1060 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 957 AAGATGGGTTCATATCTTGCTGTAGCTGCTGCTTCAGCTAATCCACCTCATTTCATCCAC 1016 Query 1061 CTTATCTACAAACCTTCTAGTGGCCCTGTTAAAACCAAACTTGCTCTTGTTGGAAAAGGA 1120 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1017 CTTATCTACAAACCTTCTAGTGGCCCTGTTAAAACCAAACTTGCTCTTGTTGGGAAAGGA 1076 Query 1121 TTGACATTTGACAGCGGTGGCTACAACATTAAAATTGGGCCTGAATTAATAATTGAGCTC 1180 |||||||||||||||||||||||||||||||| | ||||||| | ||||||||||| Sbjct 1077 TTGACATTTGACAGCGGTGGCTACAACATTAAGACCGGGCCTGGCTGCTTAATTGAGCTC 1136 Query 1181 ATGAAAATCGATGTGGGAGGTTCAGCTGCTGTTCTTGGCGCTGCAAAAGCCATTGGTGAA 1240 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||| | || Sbjct 1137 ATGAAATTCGATATGGGAGGTTCAGCTGCTGTTCTTGGCGCTGCAAAAGCCATTGCTCAA 1196 Query 1241 ATTAAGCCTCCCGGTGTTGAGGTGCACTTTATTGTCGCAGCTTGTGAGAATATGATAAGT 1300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1197 ATTAAGCCTCCCGGTGTTGAGGTGCACTTTATTGTCGCAGCTTGTGAGAATATGATAAGT 1256 Query 1301 GGTACCGGAATGAGACCTGGAGATGTCATCACAGCCTCAAACGGGAAGACAATTGAGGTC 1360 ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1257 GGTACTGGAATGAGACCTGGAGATGTCATCACAGCCTCAAACGGAAAGACAATTGAGGTC 1316 Query 1361 AACGACACCGATTCTGAAGGTCGGCTAACACTTGCAGATGCTCTAGTTTATGCTTGCAAC 1420 ||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1317 AACAACACCGATGCTGAAGGTCGACTAACACTTGCAGATGCTCTAGTTTATGCTTGCAAC 1376 Query 1421 CAGGGTGTCGATAAGATTGTTGACATTGCAACATTGACCGGGGAGAT-TATTGTTGCTCT 1479 ||||||||||||||| |||||||| ||||||||||||| |||| | |||| ||||||| Sbjct 1377 CAGGGTGTCGATAAGGTTGTTGACCTTGCAACATTGACTGGGGCT-TGTATTATTGCTCT 1435 Query 1480 TGGACCATCAATGGCAGGCATGTACACAGCTAGTGATGAGCTTGCCAAGGAGGTAATTGC 1539 |||| |||||||||||||||| || ||| |||||||| ||||||| |||||||| ||||| Sbjct 1436 TGGAACATCAATGGCAGGCATATATACACCTAGTGATAAGCTTGCAAAGGAGGTGATTGC 1495 Query 1540 TGCATCACAGAGGAGTGGAGAGAAGTTATGGAGAATGCCTATGGAAGAGAGTTATTGGGA 1599 ||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 1496 TGCATCAGAGAGGAGTGGAGAGAAGTTATGGAGAATGCCGATGGAAGAGAGTTACTGGGA 1555 Query 1600 GATGATGAAGTCAGGTGTTGCAGATATGGTTAACTTTGGAGGCCGTGCAGGTGGATCCAT 1659 |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| Sbjct 1556 GATGATGAAGTCAGGTGTGGCAGATATGGTTAACACGGGAGGCCGTGCAGGTGGATCCAT 1615 Query 1660 CACCGCAGCTCTCTTTTTGAAACGGTTTGTTAGCGAGAATGTTGAGTGGTTGCACATAGA 1719 |||||| |||||||| ||||||| ||||| | |||||||||||||||| |||||||||| Sbjct 1616 CACCGCGGCTCTCTTCTTGAAACAATTTGTGAACGAGAATGTTGAGTGGATGCACATAGA 1675 Query 1720 TATGGCTGGACGGGTGTGGAACGAGAAGAAGAAAGCTGCGACTGGGTTTGGAGTTGCGAC 1779 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| || Sbjct 1676 TATGGCTGGACCAGTGTGGAACGAGAAGAAGAAAGCTGCGACTGGTTTTGGAGTTGCTAC 1735 Query 1780 ACTTGTTGAGTGGGTACAGAACAATTCTTCTT 1811 ||| || ||||||||||||||||||||||||| Sbjct 1736 ACTCGTGGAGTGGGTACAGAACAATTCTTCTT 1767 > Ahg481277 jgi|Araly1|481277|fgenesh2_kg.4__337__AT2G24200.1 Length=1783 Score = 1349 bits (730), Expect = 0.0 Identities = 1298/1572 (83%), Gaps = 40/1572 (3%) Strand=Plus/Plus Query 257 ACTCTTGGCCTTACTCAGGCCAACTCCGTC-GATCATC-CTAAGATCTCATTTTCCGGGA 314 ||||| ||||| ||| | |||||||| | || | || | |||||||| || || | || Sbjct 82 ACTCTCGGCCTCACTAAACCCAACTCC-ACTGAGCCTCAC-AAGATCTCGTTCTCTGCGA 139 Query 315 AGGAGATTGACGTGACTGAATGGAAAGGTGATATACTCGCT-GTTGGAGTGACGGAGAAA 373 ||||| | || || || | ||||||||| | ||||||| | ||||| ||||| |||||| Sbjct 140 AGGAGGTCGATGTTACGGCATGGAAAGGACACATACTCG-TAGTTGGTGTGACAGAGAAA 198 Query 374 GA-TATGGCTAAGGATGCCAACTCCAAGTTCGAGAACCCCATAC-TGAAGAAGCTTGATG 431 || | | || || |||| | ||| ||||| ||||| || || | |||| |||||||||| Sbjct 199 GACT-TAGCCAAAGATGGTAGCTCAAAGTTTGAGAATCCGAT-CTTGAACAAGCTTGATG 256 Query 432 CCCACTTGGGTGGACTTC-TAGCTGATGTCTCGGCTGAGGAAGATTTTTCTGGGAAACCT 490 | |||||| |||||| || ||||| | ||||| ||||||||||||| |||| |||||| Sbjct 257 CTCACTTGAGTGGAC-TCTTAGCTCAAGTCTCCTCTGAGGAAGATTTCACTGGAAAACCT 315 Query 491 GGCCAGTCAACAGTTCTTAGGCTTCCGGGTCTCGGCTCAAAGCGGGTCGGTTTGATTGGT 550 || || ||||| ||||||||||||||||||||||| |||||||| ||| |||||| ||| Sbjct 316 GGTCAATCAACTGTTCTTAGGCTTCCGGGTCTCGGTTCAAAGCGAATCGCTTTGATCGGT 375 Query 551 CTTGGAAAATCTGCTTCAAC-CCCTTCGGCTTTTCAGAGTCTTGGTGAGGCTGTTGCTGC 609 ||||| | |||| |||||| || | ||||||||| || |||||||| ||||| ||| | Sbjct 376 CTTGGTCAGTCTGTTTCAACTCCGGT-GGCTTTTCATAGCCTTGGTGAAGCTGTAGCTAC 434 Query 610 AGCTGCTAAAGCTTCTCAAGCTAGCAGTGTTGC-AGTTGTTCTCGCCTCCTCTGAGAGTT 668 || | | |||||||||||| |||| || | ||| | |||| || | || || | ||| Sbjct 435 AGTTTCAAAAGCTTCTCAATCTAGTAGCGCTGCTA-TTGTGCTTG-CT--TC--A-AGTG 487 Query 669 TTTCTGATGAATCTAAGCTCAGTTCTGCTTCAGATATAGCTTCAGGCACAGTGCTTGGTT 728 ||||||||||||||||||| |||||||| |||| | |||||||||||| ||||||||||| Sbjct 488 TTTCTGATGAATCTAAGCTTAGTTCTGCATCAGCTTTAGCTTCAGGCATAGTGCTTGGTT 547 Query 729 TGTTTGAAGACAGTCGGTATAAGTCTGAGTCAAAGAAACCATCTCTCAAATCTGTAGTAT 788 |||||||||| || ||||||||||||| ||||||||||||||| | || ||||| | || Sbjct 548 TGTTTGAAGATGGTAGGTATAAGTCTGAATCAAAGAAACCATCTTTGAAGTCTGTTG-AT 606 Query 789 -TCATTGGCTTTGGCACTGGACCTGA-ACTAGAGAACAAGCTTAAGTATGCTGAACATGT 846 ||||||| ||||| ||||| ||||| | ||||||| ||||| |||||||||||| |||| Sbjct 607 ATCATTGGATTTGGAACTGGTCCTGAGA-TAGAGAAGAAGCTGAAGTATGCTGAAGATGT 665 Query 847 TTCTTATGGCGTAATTTTCACGAAAGAACTTGTTAATTCACCAGCCAATGTTCTCT-CCC 905 |||||| || || |||||| || |||||| |||||| || |||||||| || | | | Sbjct 666 TTCTTACGGTGTGATTTTCGGGAGAGAACTCACTAATTCTCCTGCCAATGTGCT-TACTC 724 Query 906 CTGCCGTACTAGCTGAGGAAGCCTCGAATCTGGCTTCCATGTACAGTAATGTCATGACTG 965 |||| ||||||||||||||||| | || ||||||| | ||||||| ||||| | |||| Sbjct 725 CTGCTGTACTAGCTGAGGAAGCAGCAAAAGTGGCTTCTACGTACAGTGATGTCTTCACTG 784 Query 966 CAAACATCTTGAAAGAGGAGCAATGCA-AAGAATTGAAGATGGGTTCATATCTTGCTGTA 1024 ||||||||||||| || |||||||||| || | |||||||||||||| ||||| ||||| Sbjct 785 CAAACATCTTGAACGAAGAGCAATGCAGAA-AGTTGAAGATGGGTTCCTATCTAGCTGTT 843 Query 1025 GCTGCTGCTTCAGCTAATCCACCTCATTTCATCCACCTTATCTACAAACCTTCTAGTGGC 1084 |||||||| || || ||||| ||| |||||||||||||| | || |||||||| |||||| Sbjct 844 GCTGCTGCCTCGGCGAATCCCCCTTATTTCATCCACCTTGTTTATAAACCTTCCAGTGGC 903 Query 1085 CCTGTTAAAACCAAACTTGCTCTTGTTGGAAAAGGATTGACATTTGACAGCGGTGGCTAC 1144 ||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||||| Sbjct 904 TCTGTTAAGACCAAACTTGCTCTTGTAGGAAAAGGATTGACCTTTGACAGTGGTGGCTAC 963 Query 1145 AACATTAAAATTGGGCCTGAATTAATAATTGAGCTCATGAAAATCGATGTGGGAGGTTCA 1204 |||||||| | ||| || | | ||||||||||||||||| | || |||| || ||| Sbjct 964 AACATTAAGACTGGACCAGGCTGCTTAATTGAGCTCATGAAATTAGACATGGGCGGCTCA 1023 Query 1205 GCTGCTGTTCTTGGCGCTGCAAAAGCCATTGGTGAAATTAAGCCTCCCGGTGTTGAGGTG 1264 |||||||||||||||||||| ||||| |||||||| ||||||||||| ||||||||||| Sbjct 1024 GCTGCTGTTCTTGGCGCTGCGAAAGCTATTGGTGAGATTAAGCCTCCTGGTGTTGAGGTT 1083 Query 1265 CACTTT-ATTGTCGCAGCTTGTGAGAATATGATAAGTGGTACCGGAATGAGACCTGGAGA 1323 || ||| || || || || |||||||||||||| ||||| |||||||||||||||||||| Sbjct 1084 CA-TTTCATCGTTGCCGCCTGTGAGAATATGATCAGTGGAACCGGAATGAGACCTGGAGA 1142 Query 1324 TGTCATCACAGCCTCAAACGGGAAGACAATTGAGGTCAACGACACCGATTCTGAAGGTCG 1383 ||||||||||||||| ||||| ||||| ||||| |||||| |||| ||| |||||||||| Sbjct 1143 TGTCATCACAGCCTCGAACGGAAAGACCATTGAAGTCAACAACACAGATGCTGAAGGTCG 1202 Query 1384 GCTAACACTTGCAGATGCTCTAGTTTATGCTTGCAACCAGGGTGTCGATAAGATTGTTGA 1443 |||||||||||||||||||||| ||| |||| |||||||| ||||| ||||||||||| Sbjct 1203 TTTAACACTTGCAGATGCTCTAGTGTATACTTGTAACCAGGGCGTCGACAAGATTGTTGA 1262 Query 1444 CATTGCAACATTGACCGGGGAGAT-TATTGTTGCTCTTGGACCATCAATGGCAGGCATGT 1502 | | || || ||||| |||| | |||| |||||||||| | ||||||||||| || | Sbjct 1263 CCTCGCTACTTTGACTGGGGCC-TGTATTATTGCTCTTGGGTCTTCAATGGCAGGTATCT 1321 Query 1503 ACACAGCTAGTGATGAGCTTGCCAAGGAGGTAATTGCTGCATCACAGAGGAGTGGAGAGA 1562 | ||| |||| || || ||||| ||||| || |||||||||||| | ||||||||||||| Sbjct 1322 ATACACCTAGCGACGACCTTGCAAAGGAAGTGATTGCTGCATCAGAAAGGAGTGGAGAGA 1381 Query 1563 AGTTATGGAGAATGCCTA-TGGAAGAGAGTTATTGGGAGATGATGAAGTCAGGTGTTGCA 1621 || | ||||| ||||| | |||||||||| |||||||||||||||||||| || || || Sbjct 1382 AGCTGTGGAGGATGCC-ACTGGAAGAGAGCTATTGGGAGATGATGAAGTCTGGAGTGGCT 1440 Query 1622 GATATGGTTAACTTTGGAGGCCGTGCAGGTGGATCCATCACCGCAGCTCTCTTTTTGAAA 1681 |||||||| ||| || || |||||||| || |||||||||||||||||||| |||||| Sbjct 1441 GATATGGTCAACACAGGCGGGCGTGCAGGAGGTTCCATCACCGCAGCTCTCTTCTTGAAA 1500 Query 1682 CGGTTTGTTAGCGAGAATGTTG-AGTGGTTGCACATAGATATGGCTGGACGGGTGTGGAA 1740 | |||||| || ||||| || | | ||| |||| || || |||||||||| | |||||| Sbjct 1501 CAGTTTGTGAGTGAGAAGGT-GCAATGGATGCATATCGACATGGCTGGACCAGCGTGGAA 1559 Query 1741 CGAGAAGAAGAAAG-CTGCGACTGGGTTTGGAGTTGCGACACTTGTTGAGTGGGTACAGA 1799 |||||||||||| | ||| |||||||||||| ||||| || |||||||| |||||||||| Sbjct 1560 CGAGAAGAAGAA-GTCTGGGACTGGGTTTGGTGTTGCTACGCTTGTTGAATGGGTACAGA 1618 Query 1800 ACAATTCTTCTT 1811 | ||||| |||| Sbjct 1619 AGAATTCATCTT 1630 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 75990038775 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5