BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G32070.1
Length=2515
Score E
Sequences producing significant alignments: (Bits) Value
Ahg353623 jgi|Araly1|353623|fgenesh1_pg.C_scaffold_7000796 3393 0.0
Ahg481385 jgi|Araly1|481385|fgenesh2_kg.4__445__AT2G25290.1 1195 0.0
> Ahg353623 jgi|Araly1|353623|fgenesh1_pg.C_scaffold_7000796
Length=2361
Score = 3393 bits (1837), Expect = 0.0
Identities = 2096/2215 (95%), Gaps = 42/2215 (2%)
Strand=Plus/Plus
Query 80 ATGGGAAAGCCAACGGCGAAGAAGAAAAATCCGGAGACGCCAAAAGATGCTTCcggcggc 139
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 1 ATGGGAAAGCCAACGGCGAAGAAGAAAAATCCGGAGACGCCAAAAGATGCTT----C--C 54
Query 140 ggcggcggcggTGGAGGCAAGTCAGGGAAAACTTACCATCGTTCTACTTCGAGGGTATTT 199
||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct 55 GGCGGCGGC---GGAGGCAAGTCAGGGAAAACTTACAATCGTTCTACTTCGAGGGCATTT 111
Query 200 GACGAAGATATGGAGATTTTCATTAGCAGAGCACTTGAGCTCAAAGAAGAAGGTAACAAG 259
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 112 GACGAAGATATGGAGATCTTCATTAGCAGAGCACTTGAGCTCAAAGAAGAAGGTAACAAG 171
Query 260 TTGTTCCAGAAACGCGACCACGAAGGTGCGATGTTGAGTTTCGACAAAGCCTTGAAGCTC 319
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 172 TTGTTCCAGAAACGCGACCACGAAGGTGCCATGTTGAGTTTCGACAAAGCCTTGAAGCTC 231
Query 320 TTGCCCAAAG-ATCATATCGATGTAGCTTATCTTAGAACGAGTATGGCTTCTTGTTATAT 378
||| || ||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 232 TTG-CCTAAGAATCATATCGATGTAGCTTATCTAAGAACGAGTATGGCTTCTTGTTATAT 290
Query 379 GCAAATGGGATTAGGTGAGTATCCGAATGCGATTAGCGAATGTAATTTGGCTCTTGAAGC 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 291 GCAAATGGGATTAGGTGAGTATCCGAATGCGATTAGCGAATGTAATTTGGCTCTTGAGGC 350
Query 439 TTCTCCTAGGTACAGTAAGGCTTTAGTCAGACGTTCTCGGTGTTACGAGGCTTTGAATAA 498
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 351 TTCTCCTAGGTACAGTAAGGCTTTAGTGAGACGGTCTCGGTGTTACGAGGCTTTGAATAA 410
Query 499 GTTAGATTACGCGTTTAGGGATGCTCGTATTGTTTTGAATATGGAGCCAGG-AAATGTGT 557
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 411 GTTAGATTACGCGTTTAGGGATGCTCGTATTGTTTTGAATATGGAGCC-GGAAAATGTGT 469
Query 558 CTGCAAATGAAATCTTTGATAGGGTGAAGAAAGTGTTGGTGGATAAAGGTATTGATGTGG 617
|||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||
Sbjct 470 CTGCGAATGAAATCTTTGATAGGGTGAAGAAGGTGTTGGTGGATAAAGGTGTTGATGTGG 529
Query 618 ATGAAATGGAGAAGGACTTTGTCGATGTACAGCCTGTTTGCGCTGCTCGTTTgaagaaga 677
|||||||||||||| ||||||| ||||| ||||||||| |||| ||||||||||||||||
Sbjct 530 ATGAAATGGAGAAGAACTTTGTTGATGTGCAGCCTGTTGGCGCAGCTCGTTTGAAGAAGA 589
Query 678 ttgtgaaggagaggttgaggaag-agtaagaagaagaaaaagagtggtgggaaggaTGAG 736
|||| |||||||||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct 590 TTGTCAAGGAGAGGTTGAGGAAGAAG-AAGAAGAAGAAGAAGAGTGGTGGGAAGGATGAG 648
Query 737 GAACTGAAGAGTC--C-A-A-A---G--G-T-----T------GTTGTTGTTGACAAGGG 774
||||||||||| | | | | | | | | | |||||||||||||||||
Sbjct 649 GAACTGAAGAG-CAACAACAGAGTTGTTGTTGAGAGTCCAAAGGTTGTTGTTGACAAGGG 707
Query 775 AGACGAAGCAGAGGGCAGAAATAAGCCGAAGGAGGAAAAGAGCGATAAGTCTGACATTGA 834
||||||||||||| || ||||||||| |||||| |||||||||||||||||||| |||||
Sbjct 708 AGACGAAGCAGAGAGCCGAAATAAGCTGAAGGAAGAAAAGAGCGATAAGTCTGAGATTGA 767
Query 835 TGGAAAGATTGGTGGCaag-agagaagaaaagaaaacaagtttcaagagtgataaaggac 893
||| |||| ||||||| || |||||||| |||||||||||||||||| ||||||||||||
Sbjct 768 TGGGAAGAGTGGTGGC-AGTAGAGAAGATAAGAAAACAAGTTTCAAGGGTGATAAAGGAC 826
Query 894 agaaaaagaaaagTGGTGGTAATAAAGCAGGAGAAGAGAGGAAGGTGGAGGATAAGGTCG 953
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 827 AGAAAAAGAAAAGTGGTGGTAAGAAGGCAGGAGAAGAGAGGAAGGTGGAGGATAAGGTCG 886
Query 954 TTGTTATGGACAAAGAGGTCATTGCTTCCGAGATTGTTGATGGAGGAGGAAGCAAAAAAG 1013
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct 887 TTGTTATGGACAAAGAGGTCATTGCTTCCGAGATTGTTGAAGGAGGAGGAAGCACAAAAG 946
Query 1014 AAGGGGCAACGGTTACTAGGACTATCAAGCTGGTACATGGAGATGATATAAGGTGGGCAC 1073
|||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct 947 GAGGGGCAACGGTTACTAGGACTGTCAAGTTGGTACATGGAGATGATATAAGGTGGGCAC 1006
Query 1074 AATTGCCGTTGGATTCTACTGTTAGACTTGTGAGAGATGTAATCAGGGATCGCTTTCCTG 1133
|||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 1007 AATTGCCGCTGGATTCTACTGTTAGACTTGTAAGAGATGTAATCAGGGATCGGTTTCCTG 1066
Query 1134 CTCTT-AGGGGTTTCCTCATTAAATATAGGGATACAGAAGGTGACTTGGTAACCATTACC 1192
|| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1067 CT-TTAAGGGGTTTCCTCATTAAATATAGGGATACAGAAGGTGACTTGGTAACCATTACC 1125
Query 1193 ACAACTGATGAGCTGAGGCTAGCTGCTTCTACTCATGATAAACTTGGCTCCCTTAGATTA 1252
||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1126 ACAACAGATGAGCTGAGGCTAGCTGCTTCTACTCATGATAAACTTGGTTCCCTTAGATTA 1185
Query 1253 TATATAGCAGAAGTTAACCCTGACCAAGAACCAACCTATGATGGCATGAGCAATACTGAA 1312
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1186 TATATAGCAGAAGTTAACCCCGACCAAGAACCAACCTATGATGGCATGAGCAATACTGAA 1245
Query 1313 TCAACTGACAAGGTTTCCAAGAGATTAAGTAGCCTTGCGGACAATGGTAGTGTTGGAGAA 1372
||||||||||||||| |||||||||| || ||||||||||||||||| ||||| ||||||
Sbjct 1246 TCAACTGACAAGGTTGCCAAGAGATTGAGCAGCCTTGCGGACAATGGAAGTGTCGGAGAA 1305
Query 1373 TACGTGGGATCTGACAAAGCATCTGGGTGCTTTGAGAACTGGATTTTCCAGTTTGCGCAA 1432
||| ||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 1306 TACTTGGAATCTGACAAAGCATCTGCGTGCTTTGAAAACTGGATTTTCCAGTTTGCGCAA 1365
Query 1433 TTGTTTAAGAACCATGTTGGGTTTGATTCTGATTCGTACGTGGACCTTCATGACCTTGGG 1492
||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct 1366 TTGTTCAAGAACCATGTTGGGTTTGATTCTGACTCGTACTTGGACCTTCATGACCTTGGG 1425
Query 1493 ATGAAGCTGTATACGGAAGCAATGGAGGATGCTGTCACTGGTGAAGATGCGCAGGAACTC 1552
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1426 ATGAAGCTATATACGGAAGCAATGGAGGATGCTGTCACTGGTGAAGATGCGCAGGAACTC 1485
Query 1553 TTTCAAATCGCTGCTGATAAGTTCCAAGAAATGGGGGCACTAGCTTTGTTGAACTGGGGT 1612
||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 1486 TTTGAAATCGCTGCTGATAAGTTCCAAGAAATGGGTGCACTAGCTTTGTTTAACTGGGGT 1545
Query 1613 AACGTTCACATGTCCAAGGCAAGGAAGCAAGTCTGTATACCCGAGGATGCCTCTAGAGAA 1672
||||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||
Sbjct 1546 AACGTTCACATGTCCAAGGCAAGGAAGCAGGTCTGTTTACCCGAGGATGCCTCGAGAGAA 1605
Query 1673 GCTATAATAGAAGCAGTTGAGGCTGCATTTGTGTGGACACAGAACGAGTACAACAAAGCT 1732
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1606 ACTATAATAGAAGCAGTTGAGGCTGCATTTGTGTGGACATGGAACGAGTACAACAAAGCT 1665
Query 1733 GCAGAGAAATATGAAGAAGCAATTAAGGTTAAACCTGATTTTTACGAAGCTCTTCTAGCA 1792
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1666 GCAGAGAAATATGAAGAAGCGATTAAGGTTAAACCTGATTTTTACGAAGCTCTTCTAGCA 1725
Query 1793 CTTGGGCAAGAGCAGTTTGAACATGCAAAGCTTTGCTGGTATCATGCACTCAAAAGCAAG 1852
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1726 CTTGGGCAAGAGCAGTTTGAACAGGCAAAGCTTTGCTGGTATCATGCACTCAAAAGCAAG 1785
Query 1853 GTAGACCTAGAAAGTGAGGCTTCTCAAGAGGTCCTGAAGCTCTATAACAAAGCTGAAGAT 1912
||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct 1786 GTAGACCTAGAAAGTGAGGTTTCCCAAGAGGTCCTGAAGCTCTATAACAAAGCTGAAGAT 1845
Query 1913 AGTATGGAGAGGGGTATGCAGATCTGGGAAGAGATGGAAGAATGTCGTCTAAATGGAATC 1972
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1846 AGTATGGAGAGGGGTATGCAGATCTGGGAAGAGATGGAAGAATGTCGTCTAAATGGAATC 1905
Query 1973 TCCAAGTTAGATAAACATAAAAACATGTTGCGGAAGTTGGAGTTGGATGAATTGTTTAGT 2032
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1906 TCCAAGTTAGATAAACATAAAAACATGTTGCGGAAGTTGGAGTTGGATGAATTGTTTAGC 1965
Query 2033 GAAGCTTCAGAAGAGGAAACTGTGGAGCAGACAGCTAATATGAGTTCTCAGATTAACCTC 2092
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1966 GAAGCTTCAGAAGAAGAAACTGTGGAGCAAACAGCTAATATGAGTTCTCAGATTAACCTC 2025
Query 2093 TTGTGGGGTTCGTTGCTATATGAACGGTCAATTGTGGAGTACAAGCTCGGGCTACCAACT 2152
||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2026 TTGTGGGGTTCGTTGTTATATGAACGGTCTATTGTGGAGTACAAGCTCGGGCTACCAACA 2085
Query 2153 TGGGATGAATGTTTGGAGGTTGCAGTGGAGAAGTTTGAGCTAGCTGGAGCTTCTGCAACT 2212
|||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 2086 TGGGATGAATGTTTAGAGGTTGCAGTGGAGAAATTTGAACTAGCTGGAGCTTCTGCAACT 2145
Query 2213 GATATAGCTGTGATGGTAAAGAACCATTGTTCAAGCGAGAGTGCACTTGAAGGTA 2267
||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2146 GATATAGCTGTGATGGTAAAGAATCATTGTTCAAGCGAGAGTGCACTTGAAGGTA 2200
Score = 274 bits (148), Expect = 2e-72
Identities = 160/166 (96%), Gaps = 0/166 (0%)
Strand=Plus/Plus
Query 2350 AGGTATGGGATTCAAGATTGATGAAATAGTGCAGGCATGGAATGAGATGTATGATGCCAA 2409
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2196 AGGTATGGGATTCAAGATTGATGAAATAGTACAGGCATGGAATGAGATGTATGATGCCAA 2255
Query 2410 GAGATGGCAGATGGGTGTCCCATCTTTCCGGCTAGAACCAATGTTCCGGAGACGAGCTCC 2469
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||
Sbjct 2256 GAGATGGCAGATGGGTGTCCCATCTTTCCGGCTAGAACCGATGTTCCGCAGACGAGCCCC 2315
Query 2470 GAAACTGCATGATATCTTAGAGAATGTATTTTCAGGGCCTGTTTGA 2515
|||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2316 AAAACTGCATGATATCTTAGAGAATGTATTTTCAGGGCCTGCTTGA 2361
> Ahg481385 jgi|Araly1|481385|fgenesh2_kg.4__445__AT2G25290.1
Length=2196
Score = 1195 bits (647), Expect = 0.0
Identities = 1107/1328 (83%), Gaps = 35/1328 (3%)
Strand=Plus/Plus
Query 955 TGTTATGGACAAAGAGGTCATTGCTTCCGAGATTGTTGATGGAGGAGGAAGCAAAAAAGA 1014
||| ||||| ||||||||||||||||| ||||||| | | || || | || || ||
Sbjct 879 TGTCATGGATAAAGAGGTCATTGCTTCAGAGATTG-T--T-GA-GA-G-CGC--TAAGGA 929
Query 1015 AGGGGCAACGGTTACTAGGACTA-TCAAGCTGGTACATGGAGATGATATAAGGTGGGCAC 1073
|| ||||| || |||||||| | | ||| |||| ||||||||||||||| |||||||||
Sbjct 930 AGACGCAACAGTGACTAGGAC-AGTGAAGTTGGTTCATGGAGATGATATACGGTGGGCAC 988
Query 1074 AATTGCCGTTGGATTCTACTGTTAGACTTGTGAGAGATGTAATCAGGGATCGCTTTCCTG 1133
|||||||||||||||||| |||||||||||| ||||| || ||||||||||| |||||||
Sbjct 989 AATTGCCGTTGGATTCTAGTGTTAGACTTGTAAGAGACGTGATCAGGGATCGGTTTCCTG 1048
Query 1134 CTCTTAGGGGTTTCCTCATTAAATATAGGGA-TACAGAAGGTGACTTGGTAACCATTACC 1192
|||| | ||||||||| || ||||||||||| | |||| ||||| ||||| ||||||||
Sbjct 1049 CTCTGAAGGGTTTCCTGATCAAATATAGGGACT-CAGAGGGTGATTTGGTTACCATTACT 1107
Query 1193 ACAACTGATGAGCTGAGGCTAGCTGCTTCTACTCA-TGATAAACTTGGCTCCCTTAGATT 1251
|| || |||||||| ||||| ||||| |||||| | || |||||||||||| |||||||
Sbjct 1108 ACGACAGATGAGCTAAGGCTGGCTGCATCTACT-AGGGAGAAACTTGGCTCCTTTAGATT 1166
Query 1252 ATATATAGCAGAAGTTAACCCTGACCAAGAACCAACCTATGATGGCAT-GAGCAAT-ACT 1309
|||||||| ||||||| ||| | ||||||||||| ||||||| ||| || ||| | |
Sbjct 1167 GTATATAGCTGAAGTTAGCCCCAATCAAGAACCAACTTATGATGTCATCGA-AAATGA-T 1224
Query 1310 GAATCAACTGACAAGGTTT-CCAAGAGATTAAGTAGCCTTGCGGACAATGGTAGTGTTGG 1368
|| |||||||| || |||| ||||| ||| ||||| |||| || ||||| || || ||
Sbjct 1225 GAGTCAACTGATAA-GTTTGCCAAGGGATCGAGTAGTGTTGCTGATAATGGAAGCGTCGG 1283
Query 1369 AGAATACGTGGGATCTGACAAAGCATCTGGGTGCTTTGAGAACTGGATTTTCCAGTTTGC 1428
||| || |||| |||||| ||||||||| | ||||| |||||||||||||||||||
Sbjct 1284 AGACTATGTGGAATCTGAGAAAGCATCTACCACCCTTGAGCACTGGATTTTCCAGTTTGC 1343
Query 1429 GCAATTGTTTAAGAACCATGTTGGGTTTGATTCTGATTCGTACGTGGACCTTCATGACCT 1488
||||||||||||||||||||| ||||||||||||||||| ||| |||| |||||| ||||
Sbjct 1344 GCAATTGTTTAAGAACCATGTCGGGTTTGATTCTGATTCTTACTTGGAACTTCATAACCT 1403
Query 1489 TGGGATGAAGCTGTATACGGAAGCAATGGAGGATGCTGTCACTGGTGAAGATGCGCAGGA 1548
||||||||| |||||||| ||||||||||| ||| ||||||||| ||||||||||| |
Sbjct 1404 TGGGATGAAACTGTATACAGAAGCAATGGAAGATATTGTCACTGGCGAAGATGCGCAACA 1463
Query 1549 ACTCTTTCAAATCGCTGCTGATAAGTTCCAAGAAATGGGGGCACTAGCTTTGTTGAACTG 1608
||||||| | || |||||||||||||| |||||||||| || || || |||| |||||
Sbjct 1464 ACTCTTTGATATTGCTGCTGATAAGTTTCAAGAAATGGCTGCGCTTGCAATGTTTAACTG 1523
Query 1609 GGGTAACGTTCACATGTCCAAGGCAAGGAAG-CA-AGTCTGTATACCCGAGGATGCCTCT 1666
||| || ||||| |||||||||||||| ||| || | ||| | | |||||||||| ||
Sbjct 1524 GGGGAATGTTCATATGTCCAAGGCAAG-AAGGCAGA-TCTATTTTCCCGAGGATGGTTCA 1581
Query 1667 AGAGAAGCTATAATAGAAGCA-GTTGAGGCTGCATTTGTGTGGACACAGAACGAGTACAA 1725
|||||| ||||| |||| | | |||||||| | ||||| |||| || | |||||||||||
Sbjct 1582 AGAGAAACTATACTAGA-GAAAGTTGAGGCCGGATTTGAGTGGGCAAAAAACGAGTACAA 1640
Query 1726 CAAAGCTGCAGAGAAATATGAAGAAGCAATTAAGGTTAAACCTGATTTTTACGAAGCTCT 1785
|||||||||||| ||||| |||| || ||||| ||||| ||||||| || ||||||||
Sbjct 1641 CAAAGCTGCAGAAAAATACGAAGGGGCGATTAAAATTAAATCTGATTTCTATGAAGCTCT 1700
Query 1786 TCTAGCACTTGGGCAAGAGCAGTTTGAACATGCAAAGCTTTGCTGGTATCATGCACTCAA 1845
||||||||| |||||| | ||||||||||| || ||||||||||||||||||||| | |
Sbjct 1701 TCTAGCACTCGGGCAACAACAGTTTGAACAGGCTAAGCTTTGCTGGTATCATGCATTGAG 1760
Query 1846 AAGCAAGGTAGACCTAGAAAGTGAGGCTTCTCAAGAGGTCCTGAAGCTCTATAACAAAGC 1905
|| ||||||| ||||||| || ||| || || || || |||||||||||||||||
Sbjct 1761 CGGCGAGGTAGATATAGAAAGCGATATTTCCCAGGATGTTCTAAAGCTCTATAACAAAGC 1820
Query 1906 TGAAGATAGTATGGAGAGGGGTATGCAGATCTGGGAAGAGATGGAAGAATGTCGTCTAAA 1965
||| || || ||||| | ||||||||| || |||||||||||||||||| | ||||||||
Sbjct 1821 TGAGGAGAGCATGGAAAAGGGTATGCAAATATGGGAAGAGATGGAAGAACGCCGTCTAAA 1880
Query 1966 TGGAATCTCCAAGTTAGATAAACATAAA-AACATGTTGCGGAAGTT-GGAGTTGGATG-A 2022
|||||||||||| || |||||||||||| ||| || | | |||||| || ||||||| |
Sbjct 1881 TGGAATCTCCAATTTCGATAAACATAAAGAAC-TGCTACAGAAGTTAGGC-TTGGATGGA 1938
Query 2023 ATTGTTTAGTGAAGCTTCAGAAGAGGAAA-CTGTGGAGCAGACAGCTAATATGAGTTCTC 2081
|| ||||||||||| || || || |||| | | ||||| ||||||||||||||||| |
Sbjct 1939 ATC-TTTAGTGAAGCATCTGATGAAGAAAGC-GCAGAGCAAACAGCTAATATGAGTTCCC 1996
Query 2082 AGATTAACCTCTTGTGGGGTTCGTTGCTATATGAACGGTCAATTGTGGAGTACAAGCTCG 2141
||||||| || ||||||||||| || || ||||||||||| || |||||||| ||||| |
Sbjct 1997 AGATTAATCTTTTGTGGGGTTCCTTACTGTATGAACGGTCCATCGTGGAGTATAAGCTTG 2056
Query 2142 GGCTACCAACTTGGGATGAATGTTTGGAGGTTGCAGTGGAGAAGTTTGAGCTAGCTGGAG 2201
| ||||| || |||||||||||||||||||||||||||||||| ||||| || |||||||
Sbjct 2057 GCCTACCGACCTGGGATGAATGTTTGGAGGTTGCAGTGGAGAAATTTGAACTGGCTGGAG 2116
Query 2202 CTTCTGCAACTGATATAGCTGTGATGGTAAAGAACCATTGTTCAAGCGAGAGTGCACTTG 2261
|||||||||| ||||||||||| ||||||||||||||||| ||||| || | ||||||||
Sbjct 2117 CTTCTGCAACCGATATAGCTGTCATGGTAAAGAACCATTGCTCAAGTGACAATGCACTTG 2176
Query 2262 AAGGTAAT 2269
||||||||
Sbjct 2177 AAGGTAAT 2184
Score = 422 bits (228), Expect = 8e-117
Identities = 410/496 (83%), Gaps = 20/496 (4%)
Strand=Plus/Plus
Query 228 GAGCACTT-GAGCTCAAAGAAGAAGGTAACAAGTTGTTCCAGAAACGCGACCACGAAGGT 286
||||| || || |||||||||||||| ||||| || ||||||||||| || |||||||
Sbjct 233 GAGCA-TTAGAACTCAAAGAAGAAGGCAACAAATTATTCCAGAAACGTGATAACGAAGGA 291
Query 287 GCGATGTTGA-GTTTCGACAAAGCC-TTGAAGCTCTTGCCCAAAGATCATATCGATGTAG 344
|| ||||| | || | || |||||| || ||||| || || | ||||||| |||||||
Sbjct 292 GCAATGTTTAGGTAT-GATAAAGCCGTT-AAGCTATTACCTAGAGATCATGGAGATGTAG 349
Query 345 CTTATCTT-AGAACGAGTATGGCTTCTTGTTATATGCAAATGGGATTAGGTGAGTATCCG 403
||||| || ||||| ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 350 CTTAT-TTGAGAACAAGTATGGCTTCTTGTTATATGCAAATGGGATTAGGAGAGTATCCT 408
Query 404 AATGCGATTAGCGAATGTAATTTGGCTCTT-GAAGCTTCTCCTAGGTACAGTAAGGCTTT 462
|||||||||| |||||||||||||||| || || ||||||||||||| ||||| |||||
Sbjct 409 AATGCGATTAACGAATGTAATTTGGCT-TTAGAGGCTTCTCCTAGGTTTAGTAAAGCTTT 467
Query 463 AGTC-AGACGTTCTCGGTGTTACGAGGCTTTGAATAAGTTAGATTACGCGTTTAGGGATG 521
|| | ||| |||| ||||| |||||||||||||| || |||| ||| ||| |||||
Sbjct 468 -GTTGAAACGAGCTCGTTGTTATGAGGCTTTGAATAAATTGGATTTCGCCTTTCGGGATT 526
Query 522 CTCGTATTGTTTTGAATATGGAGCCAG-GAAATGTGTCTGCAAATGAAATCTTTGATAGG 580
| || ||||||||||||||||||| | ||| ||| ||||| ||||| || ||||| |||
Sbjct 527 CGCGCGTTGTTTTGAATATGGAGCCTGAGAA-TGTTTCTGCTAATGAGATTTTTGAGAGG 585
Query 581 GTGAAGAAAGTGTTGGT-GGATAAAGGTATTGATGTGGATGAAATGGAGAAGGACTTTG- 638
|||||||| || ||||| || |||||| |||||||| || || ||||||||| | ||||
Sbjct 586 GTGAAGAAGGTTTTGGTTGG-TAAAGGGATTGATGTTGAGGAGATGGAGAAGAA-TTTGG 643
Query 639 TCGATGTACAGCCTGTTTGCGCTGCTCGTTTgaagaagattgtgaaggagaggttgagga 698
| |||| ||||||||| | || || | |||| ||||||||| ||||||||||||||||
Sbjct 644 TTAATGTTCAGCCTGTTGGTGCGGCGAGGTTGAGGAAGATTGTTAAGGAGAGGTTGAGGA 703
Query 699 aga-gtaagaagaaga 713
||| | ||||||||||
Sbjct 704 AGAAG-AAGAAGAAGA 718
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 94806619805
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5