BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G32390.1
Length=1539
Score E
Sequences producing significant alignments: (Bits) Value
Ahg944722 jgi|Araly1|944722|scaffold_700951.1 1722 0.0
Ahg932703 jgi|Araly1|932703|scaffold_400691.1 1099 0.0
Ahg942103 jgi|Araly1|942103|scaffold_602647.1 867 0.0
Ahg940598 jgi|Araly1|940598|scaffold_601142.1 861 0.0
> Ahg944722 jgi|Araly1|944722|scaffold_700951.1
Length=1093
Score = 1722 bits (932), Expect = 0.0
Identities = 1033/1083 (95%), Gaps = 1/1083 (0%)
Strand=Plus/Plus
Query 118 tcctcctcctccGAGACAATGGGAAAAGGCGGTGCACTTAGCGATGGAGTCATCAAGAAG 177
||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3 TCCTCCTCCTCCGCCACCATGGGAAAAGGCGGTGCGCTTAGCGATGGAGTCATCAAGAAG 62
Query 178 ATCCTCCTCTCCTACACCTACGTCGCGATCTGGATCTTCCTGAGCTTCACCGTCATCGTC 237
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 63 ATCCTCCTCTCCTACACCTACGTCGCGATCTGGATCTTCCTCAGCTTCACCGTCATCGTC 122
Query 238 TACAACAAATACATCCTCGACAAGAAGATGTACAATTGGCCTTTTCCGATCACACTCACC 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 123 TACAACAAATACATCCTCGACAAGAAGATGTACAATTGGCCTTTTCCGATCACACTCACC 182
Query 298 ATGATCCACATGGCTTTTTGCTCTTCCCTCGCCGTCATCCTCATCAAAGTCTTCAAAATC 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 183 ATGATCCACATGGCTTTTTGCTCTTCCCTCGCCGTCATCCTCATCAAAGTCTTCAAAATC 242
Query 358 GTCGAGCCTGTTTCAATGTCTCGAGATACTTACATCAGATCTGTAGTCCCGATCGGTGCT 417
|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 243 GTCGAGCCTGTTTCAATGTCACGAGAGACTTACATCAGATCTGTAGTCCCGATCGGTGCT 302
Query 418 CTGTACTCGCTTTCTCTCTGGCTCTCCAATTCCGCTTACATTTACCTCTCCGTCTCCTTC 477
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 303 TTGTACTCGCTCTCTCTCTGGCTCTCCAATTCCGCTTACATTTACCTCTCCGTCTCCTTC 362
Query 478 ATTCAGATGCTCAAAGCTCTAATGCCTGTCGCTGTTTACTCAATCGGAGTCCTTCTTAAG 537
||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 363 ATTCAGATGCTTAAAGCCCTAATGCCTGTCGCTGTTTACTCAATCGGAGTCCTTCTTAAG 422
Query 538 AAAGAATCGTTCAAATCGGAGACGATGACTAATATGCTCTCGATCTCTTTCGGTGTTGCG 597
|||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 423 AAAGAATCTTTCAAATCGGAGACGATGACTAACATGCTCTCGATCTCTTTCGGTGTCGCG 482
Query 598 ATTGCTGCTTATGGTGAGGCTAAGTTCGATACTTGGGGAGTTATGCTTCAGCTTGGTGCT 657
||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||
Sbjct 483 ATTGCTGCTTACGGTGAGGCTAAATTCGATACCTGGGGAGTCATGCTTCAGCTTGGTGCC 542
Query 658 GTAGCTTTCGAAGCAACGAGGTTGGTTTTGATTCAGATCTTGCTCACTTCTAAAGGAATC 717
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 543 GTAGCTTTTGAGGCAACGAGGTTGGTTTTGATTCAGATCTTGCTCACTTCTAAAGGAATC 602
Query 718 AATCTTAATCCAATCACTTCATTGTACTACGTTGCTCCTTGTTGTTTGGTGTTCCTCTTC 777
|||||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct 603 AATCTTAATCCAATCACTTCCTTGTACTACGTCGCTCCTTGTTGTTTGGTCTTCCTCTTT 662
Query 778 TTCCCTTGGATCTTCGTCGAGCTTCCGATTCTTAGGGAAACTTCGAGTTTCCACTTTGAT 837
||||||||||||||||| || || |||||||||| |||| | |||||||||||||| |||
Sbjct 663 TTCCCTTGGATCTTCGTTGAACTCCCGATTCTTAAGGAATCATCGAGTTTCCACTTCGAT 722
Query 838 TTCGTGATTTTTGGGACTAATTCCGTATGTGCATTTGCTTTGAACCTTGCTGTGTTCCTC 897
||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 723 TTCGTGATTTTCGGGACTAATTCCGTATGTGCATTTGCTTTGAACCTCGCTGTGTTCCTT 782
Query 898 CTCGTTGGAAAGACCTCGGCTTTAACAATGAATGTTGCTGGTGTGGTTAAGGATTGGCTA 957
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 783 CTCGTTGGAAAAACCTCGGCTTTAACGATGAATGTTGCTGGTGTGGTTAAGGATTGGCTT 842
Query 958 TTGATTGCCTTCTCTTGGTCTGTGATTAAAGATACGGTGACTCCGCTTAATCTCTTTGGT 1017
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 843 TTGATTGCCTTCTCTTGGTCTGTGATTAAAGATACGGTTACTCCGCTTAATCTCTTCGGT 902
Query 1018 TACGGGCTTGCGTTCTTGGGTGTTGCGTATTACAATCACTGCAAGTTACAGGCGTTGAAG 1077
|||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||
Sbjct 903 TACGGGCTTGCGTTCTTGGGTGTTGCCTATTACAATCACTGCAAGTTGCAGGCTTTGAAG 962
Query 1078 GCTAAGGATGCTCAGAAGAAGGTTCAGCAAGGTGATGAAGAAGAAGCTGGGAAGCTTTTG 1137
||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 963 GCTAAAGATGCTCAGAAGAAGGTTCAGCAATCTGATGAAGAAGCTGCTGGGAAGCTTTTG 1022
Query 1138 GAAGAGAGGGAAAGTGAAGCTGCTGCGAAACGGAATGAAACAGAAGACTGATTGAGTTGA 1197
||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||
Sbjct 1023 GAAGAGAGGGAAAGTGAAGCTGCTGCGAAACGGAATGAAACCGAAGACTGATTGA-TTGA 1081
Query 1198 TGA 1200
|||
Sbjct 1082 TGA 1084
> Ahg932703 jgi|Araly1|932703|scaffold_400691.1
Length=1087
Score = 1099 bits (595), Expect = 0.0
Identities = 894/1036 (86%), Gaps = 29/1036 (3%)
Strand=Plus/Plus
Query 136 ATGGGAAAAGG-CGGTGCACTTAGCGATGGAGTCATCAAGAAGATCCTCCTCTCCTACAC 194
||||| ||||| | |||||||| ||| ||||| || || |||||| |||| || |||||
Sbjct 24 ATGGGGAAAGGTC-GTGCACTTTCCGACGGAGTGATAAAAAAGATCATCCTTTCATACAC 82
Query 195 CTACGTCGCGATCTGGATCTTCCTGAGCTTCACCGTCATCGTCTACAACAAATACATCCT 254
||| ||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 83 CTATGTCGCAATCTGGATCTTCCTCAGCTTCACAGTCATCGTCTACAACAAATACATCCT 142
Query 255 CGACAAGAAGATGTACAATTGGCCTTTTCCGATCACACTCACCATGATCCACATGGCTTT 314
||||||||||||||| |||||||| | || || || ||||||||||| ||||||| |||
Sbjct 143 CGACAAGAAGATGTATAATTGGCCATACCCAATAACTCTCACCATGATTCACATGGGTTT 202
Query 315 TTGCTCTTCCCTCGCCGTCATCCTCATCAAAGTCTTCAAAATCGTCGAGCCTGTTTCAAT 374
|||||||||| | || || || |||||||||||||||||| |||||||||| ||||||||
Sbjct 203 TTGCTCTTCCTTAGCTGTGATTCTCATCAAAGTCTTCAAAGTCGTCGAGCCAGTTTCAAT 262
Query 375 GTCTCGAGATACTTA-CATCAGATCTGTAGTCCCGATCGGTGC-TCTGTACTCGCTTTCT 432
||| || || ||||| | ||||||| || || || ||||| || | ||||||| || |||
Sbjct 263 GTCACGCGAGACTTATC-TCAGATCCGTCGTACCAATCGGCGCGT-TGTACTCACTCTCT 320
Query 433 CTCTGGCTCTCCAATTCCGCTTACATTTACCTCTCCGTCTCCTTCATTCAGATGCTCAAA 492
|| ||| | || || || |||||||| |||||||| || ||||||||||| |||||||||
Sbjct 321 CTTTGGTTATCAAACTCTGCTTACATCTACCTCTCTGTATCCTTCATTCAAATGCTCAAA 380
Query 493 GCTCTAATGCCTGTCGCTGTTTACTCAATCGGAGTCCTTCTTAA-GAAAGA-ATCGTTCA 550
|||||||||||||| |||||||||||||||||||| || |||| |||||| | | ||||
Sbjct 381 GCTCTAATGCCTGTAGCTGTTTACTCAATCGGAGTT-TTGTTAAAGAAAGAGA-CTTTCA 438
Query 551 AATCGGAGACGATGACTAATATGCTCTCGATCTC-TTTCGGTGTTGCGATTGCTGCTTAT 609
|||| |||| |||||||| |||||||||||||| ||| |||||||| ||||||||||||
Sbjct 439 AATCTCAGACTATGACTAACATGCTCTCGATCTCGTTT-GGTGTTGCTATTGCTGCTTAT 497
Query 610 GGTGAGGCTAAGTTCGATACTTGGGGAGTTATGCTTCAGCTTGGTGCTGTAGCTTTCGAA 669
||||| |||||||| ||| |||||| ||| | ||||||||||||||||| ||||| |||
Sbjct 498 GGTGAAGCTAAGTTTGATGGTTGGGGTGTTTTTCTTCAGCTTGGTGCTGTTGCTTTTGAA 557
Query 670 GCAACGAGGTTGGTTTTGATTCAGATCTTGCTCACTTCTAAAGGAATCAATCTTAATCCA 729
|| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 558 GCTACAAGGTTGGTTTTGATTCAGATCTTGCTTACTTCTAAAGGAATCAATCTTAATCCA 617
Query 730 ATCACTTCAT-TGTACTACGTTGCTCCTTGTTGTTTGGTGTTCCTCTTCT-TCCCTTGGA 787
|||||||| | | || ||||||||||||||||||||||| ||||||| || | |||||||
Sbjct 618 ATCACTTC-TCTCTATTACGTTGCTCCTTGTTGTTTGGTTTTCCTCT-CTGTGCCTTGGA 675
Query 788 TCTTCGTCGAGCTTCC-GATTCTTAGGGAAACTTCGAGTTTCCACTTT-GATTTCGTGAT 845
|||| || ||| |||| | ||||||| || |||||||||||||| ||| |||||| ||||
Sbjct 676 TCTTTGTGGAGTTTCCAG-TTCTTAGAGATACTTCGAGTTTCCA-TTTCGATTTCTTGAT 733
Query 846 TTTTGGGACTAATTCCGTATGTGCATTTGCTTTGAACCTTGCTGTGTTCCTCCTCGTTGG 905
||||| || ||||| || ||||| ||||||||||| |||||||||||| | ||||||||
Sbjct 734 CTTTGGAACCAATTCTGTTTGTGCGTTTGCTTTGAATCTTGCTGTGTTCTTGCTCGTTGG 793
Query 906 -AAAGACCTCGGCTTTAACAATGAATGTTGCTGGTGTGGTTAAGGATTGGCTATTGATTG 964
||| ||||| ||||| ||||||||||| |||||||| ||||| |||||||| |||||||
Sbjct 794 GAAA-ACCTCTGCTTTGACAATGAATGTGGCTGGTGTTGTTAAAGATTGGCTCTTGATTG 852
Query 965 CCTTCTCTTGGTCTGTGATTAAAGATACGGTGACTCCGCTTAATCTCTTTGGTTACGGGC 1024
| ||||| ||||| |||||||| || ||||| || ||| | ||||| |||||||| || |
Sbjct 853 CATTCTCGTGGTCGGTGATTAAGGACACGGTCACACCGATCAATCTGTTTGGTTATGGAC 912
Query 1025 TTGCGTTCTTGGGTGTTGCG-TATTACAATCACTGCAAGTTACAGGCGTTGAAGGCTAAG 1083
|||| || |||||||||| | |||||||||||||||||||||||||||||||| |||||
Sbjct 913 TTGCCTTTTTGGGTGTTG-GATATTACAATCACTGCAAGTTACAGGCGTTGAAAGCTAAA 971
Query 1084 GATGCTCAGAAGAAGGTTCAG-CAAGGTGATGAAGAAGAAGCTGGGAAGCTTTTGGAAGA 1142
||||| ||||||||||||||| |||| |||||| | |||||||||||||||||||||||
Sbjct 972 GATGCACAGAAGAAGGTTCAGGCAAG-TGATGA-G--GAAGCTGGGAAGCTTTTGGAAGA 1027
Query 1143 GAGGGAAAGTGAAGCT 1158
||||||||||||||||
Sbjct 1028 GAGGGAAAGTGAAGCT 1043
> Ahg942103 jgi|Araly1|942103|scaffold_602647.1
Length=1090
Score = 867 bits (469), Expect = 0.0
Identities = 852/1033 (82%), Gaps = 41/1033 (4%)
Strand=Plus/Plus
Query 136 ATGGGAAAAGGCGG-TGCACTTAGCGATGGAGTCATCAAGAAGATCCTCCTCTCCTACAC 194
||||| ||||| || | |||| ||||| || || || ||||| || || ||||||||||
Sbjct 21 ATGGGGAAAGGTGGAT-CACTAAGCGAAGGTGTGATTAAGAACATAATCATCTCCTACAC 79
Query 195 CTACGTCGCGATCTGGATCTTCCTGAGCTTCACCGTCATCGTCTACAACAAATACATCCT 254
||||| || || ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 80 ATACGTAGCAATATGGATCTTCCTAAGCTTCACCGTCATCGTCTACAACAAATACATCCT 139
Query 255 CGACAAGAAGATGTACAATTGGCCTTTTCCGATCACACTCACCATGATCCACATGGCTTT 314
|||||||||||||||||||||||| || |||||| |||||||||||||||||||| | ||
Sbjct 140 CGACAAGAAGATGTACAATTGGCCATTCCCGATCTCACTCACCATGATCCACATGTCCTT 199
Query 315 TTGCTCTTCCCTCGCCGT-CATCCTCATCAAAGTCTTCAAAATCGTCGAGCCTGTTTCAA 373
|||||| |||| || | | || ||||||| ||||||||| | || || || || ||||
Sbjct 200 TTGCTCAACCCTAGCTTTTCTTC-TCATCAAGGTCTTCAAATTTGTTGAACCGGTCTCAA 258
Query 374 TGTCTCGAGATACTTA-CATCAGATCTGTAGTCCCGATCGGTGC-TCTGTACTCGCTTTC 431
|||| || || ||||| | ||||||| || ||||||||||| || | |||| || || ||
Sbjct 259 TGTCACGTGACACTTATC-TCAGATCCGTCGTCCCGATCGGCGCGT-TGTATTCACTCTC 316
Query 432 TCTCTGGCTCTCCAATTCCGCTTACATTTACCTCTCCGTCTCCTTCATTCAGATGCTCAA 491
||| |||||||| || || || |||||||||||||| |||||||||||||| ||||||||
Sbjct 317 TCTTTGGCTCTCTAACTCAGCCTACATTTACCTCTCTGTCTCCTTCATTCAAATGCTCAA 376
Query 492 AGC-TCTAATGCCTGTCGCTGTTTACTCAATCGGAGTCCTTCTT-AAGAAAGAATCGTT- 548
||| | ||||||| ||||| ||||| ||||| || || || ||| |||||||| |||
Sbjct 377 AGCGT-TAATGCCAGTCGCGGTTTATTCAATTGGCGTGCT-CTTCAAGAAAGAGG-GTTT 433
Query 549 CAAATCGGAGACGATGACTAATATGCTCTCGATCTC-TTTCGGTGTTGCGATTGCTGCTT 607
|||||| ||||| |||| ||| ||||| |||||||| ||| ||||| || ||||||||||
Sbjct 434 CAAATCTGAGACAATGATTAACATGCTATCGATCTCATTT-GGTGTAGCCATTGCTGCTT 492
Query 608 ATGGTGAGGCTA-AGTTCGATACTTGGGGAGTTATGCTTCAGCTTGGTGCTGTAGCTTTC 666
||||||| ||| | |||||| |||||| || || || ||||||||||| || ||||||
Sbjct 493 ATGGTGAATCTAGA-TTCGATGTTTGGGGTGTGATTCTCCAGCTTGGTGCGGTTGCTTTC 551
Query 667 GAAGCAACGA-GGTTGGTTTTGATTCAGATCTTGCTCACTTCTAAAGGAATCAATCTT-A 724
|| || || | ||||||| |||||||||||||||| |||||||||||||||| || |
Sbjct 552 GAGGCGAC-ACGGTTGGTAATGATTCAGATCTTGCTTACTTCTAAAGGAATCACG-TTGA 609
Query 725 ATCCAATCACTTCA-TTGTACTACGTTGCTCCTTGTTGTTTGG-TGTTCCTCTTCT-TCC 781
||||||||||||| || || ||||||||||||||||| || | | ||| | || | |||
Sbjct 610 ATCCAATCACTTCTCTT-TATTACGTTGCTCCTTGTTGCTTAGCT-TTCTTGTT-TATCC 666
Query 782 CTTGGATCT-TCGTCGAGCTTCCGATTCTT-AGGGAAACTTCGAGTTTCCACTTT-GATT 838
||||||| | |||| ||| ||||||| ||| || || || || || ||||| ||| ||||
Sbjct 667 CTTGGAT-TGTCGTGGAGTTTCCGAT-CTTGAGAGATACCTCTAGCTTCCA-TTTCGATT 723
Query 839 TCGTGATTTTTGGGACTAATTCCGTATGTGCATTTGCTTTGAACCTTGCTGTGTTCCTCC 898
| | ||||| ||||| ||||| | ||||| ||||||||||| ||||||||||| || |
Sbjct 724 ACCTCATTTTCGGGACGAATTCTTTTTGTGCGTTTGCTTTGAATCTTGCTGTGTTTCTTC 783
Query 899 TCGTTGG-AAAGACCTCGGCTTTAACAATGAATGTTGCTGGTGTGGTTAAGGATTGGCTA 957
| ||||| ||| ||||| ||||| || |||||||||||||||||||||||||| |||||
Sbjct 784 TGGTTGGGAAA-ACCTCTGCTTTGACCATGAATGTTGCTGGTGTGGTTAAGGACTGGCTC 842
Query 958 TTGATTGCCTTCTCTTGGTCTGTGATTAAAGATACGGTGACTCCGCTTAATCTCTTTGGT 1017
||||| ||||| || ||||| || ||||| || || |||||||| ||||||| ||||||
Sbjct 843 TTGATCGCCTTTTCGTGGTCGGTCATTAAGGACACTGTGACTCCTATTAATCTTTTTGGT 902
Query 1018 TACGGGCTTGCGTTCTTGGGTGTTGCGTATTACAATCACTGC-AAGTTACAGGCGTTGAA 1076
|| ||| |||| ||||||||||||||||| || |||||| || |||||||| || |||||
Sbjct 903 TATGGGATTGCTTTCTTGGGTGTTGCGTACTATAATCAC-GCGAAGTTACAAGCATTGAA 961
Query 1077 GGCTAAGGATGCTCAGAAGAAGGTTCAGCAAGGTGATGAAGAAGAAGCTGGGAAGCTTTT 1136
|||||| ||||||||||||| | |||||||| ||||||||| || | ||| ||||||
Sbjct 962 GGCTAAAGATGCTCAGAAGACTGCTCAGCAAGTTGATGAAGA-GA-G-TGGTCGGCTTTT 1018
Query 1137 GGAAGAGAGGGAA 1149
|||||| ||||||
Sbjct 1019 GGAAGAAAGGGAA 1031
> Ahg940598 jgi|Araly1|940598|scaffold_601142.1
Length=1095
Score = 861 bits (466), Expect = 0.0
Identities = 852/1037 (82%), Gaps = 32/1037 (3%)
Strand=Plus/Plus
Query 134 CAATGGGAAAAGGCGGTGCACTTAGCGATGGAGTCATCAAGAAGATCCTCCTCTCCTACA 193
||||||| |||||||| ||||| ||||| | || || ||||| || | ||||| ||||
Sbjct 20 CAATGGGGAAAGGCGGCGCACTAAGCGAAAGCGTGATAAAGAACATTGTTCTCTCATACA 79
Query 194 CCTACGTCGCGATCTGGATCTTCCTGAGCTTCACCGTCATCGTCTACAACAAATACATCC 253
|||||| ||||| ||||||||| | |||||||| || ||||||||||||||||||||||
Sbjct 80 GCTACGTAGCGATATGGATCTTCTTAAGCTTCACGGTAATCGTCTACAACAAATACATCC 139
Query 254 TCGACAAGAAGATGTACAATTGGCCTTTTCCGATCACACTCACCATGATCCACATGGCTT 313
||||||||||||||||||||||||| || |||||| |||||||||||||||||||| | |
Sbjct 140 TCGACAAGAAGATGTACAATTGGCCATTCCCGATCTCACTCACCATGATCCACATGTCCT 199
Query 314 TTTGCTCTTCCCTCGCCGT-CATCCTCATCAAAGTCTTCAAAATCGTCGAGCCTGTTTCA 372
||||||| |||| || | | || ||||||| || |||||| |||||||||||||| |
Sbjct 200 TTTGCTCAACCCTAGCTTTTC-TCATCATCAAGGTTTTCAAATTCGTCGAGCCTGTTAAA 258
Query 373 ATGTCTCGAGATACTTACATCAGATCTGTAGTCCCGATCGGTGCTCTGTACTCGCTTTCT 432
||| |||| || |||||| | ||||| || ||||||||||||||| ||||| | || ||
Sbjct 259 ATGACTCGCGAGACTTACCTGAGATCCGTCGTCCCGATCGGTGCTTTGTACGCTCTATCA 318
Query 433 CTCTGGCTCTCCAATTCCGCTTACATTTACCTCTCCGTCTCCTTCATTCAGATGCTCAAA 492
|||||| | || |||||||||||||||||||| || |||||||| || |||||||| |||
Sbjct 319 CTCTGGTTATCGAATTCCGCTTACATTTACCTATCAGTCTCCTTTATCCAGATGCTTAAA 378
Query 493 GCTCTAATGCCTGTCGCTGTTTACTCAATCGGAGTCCTTCTT-AAGAAAGAATCGTT-CA 550
||||| |||||||||||||||||||| ||||| || || || ||||| ||| ||| ||
Sbjct 379 GCTCTGATGCCTGTCGCTGTTTACTCGATCGGTGTTCTG-TTCAAGAAGGAAG-GTTTCA 436
Query 551 AATCGGAGACGATGACT-AATATGCTCTCGATCTC-TTTCGGTGTTGCGATTGCTGCTTA 608
|||| || || |||| | |||||||||||||| || ||| ||||||||||||||||||||
Sbjct 437 AATCTGATACTATGA-TGAATATGCTCTCGATTTCGTTT-GGTGTTGCGATTGCTGCTTA 494
Query 609 TGGTGAGGCTAAGTTCGATACTTGGGGAGTTATGCTTCAGCTTGGTGCTGTAGCTTTCGA 668
||| || |||| ||| ||| |||||| || || ||||||||||||||||| ||||| ||
Sbjct 495 TGGAGAAGCTAGGTTTGATGTTTGGGGTGTGATTCTTCAGCTTGGTGCTGTTGCTTTTGA 554
Query 669 AGCAACGAGGTTGGTTTTGATTCAGATCTTGCTCACTTCTAAAGGAATCAATCTTAATCC 728
||| || | |||||||||||||||||||| || |||||| || || ||||||||
Sbjct 555 AGCCACTCGTTTGGTTTTGATTCAGATCTTACTTGGGGATAAAGGGATTAAGCTTAATCC 614
Query 729 AATCACTTCATTGTACTACGTTGCTCCTTGTTGTTTGG-TGTTCCTCTTC-TTCCCTTGG 786
|| ||||| || || ||||||||||||||||| || | | ||| | || |||| | ||
Sbjct 615 CATTACTTCGTTATATTACGTTGCTCCTTGTTGCTTAGCT-TTCTTGTTTATTCCAT-GG 672
Query 787 ATCTTCGTCGAGCTTCCGATTCTTAGGGAAACTTCGAG-TTTCCACTTTGATTTCGTGAT 845
|||| ||| ||| ||||| ||||||| || || || || |||| |||| |||| || | |
Sbjct 673 ATCTACGTTGAGTTTCCGGTTCTTAGAGATACGTCTAGCTTTC-ACTTGGATTACGCGGT 731
Query 846 TTTTGGGACTAATTCCGTA-TGTGCATTTGCTTTGAACCTTGCTGTGTTCCTCCTCGTTG 904
||| ||| | ||||| || ||||| ||||| ||||| |||||||||||||| | ||||
Sbjct 732 TTTCGGGGCGAATTC-GTTCTGTGCGTTTGCGTTGAATCTTGCTGTGTTCCTTTTGGTTG 790
Query 905 G-AAAGACCTCGGCTTTAACAATGAATGTTGCTGGTGTGGTTAAGGATTGGCTATTGATT 963
| ||| ||||| ||||| || |||||||||||||||||||||||||||||||| ||||||
Sbjct 791 GGAAA-ACCTCTGCTTTGACTATGAATGTTGCTGGTGTGGTTAAGGATTGGCTCTTGATT 849
Query 964 GCCTTCTCTTGGTCTGTGATTAAAGATACGGTGACTCCGCTTAATCTCTTT-GGTTACGG 1022
|| |||||||||||||||||||| ||||| |||||||| |||| || ||| || |||||
Sbjct 850 GCTTTCTCTTGGTCTGTGATTAAGGATACTGTGACTCCTATTAACCT-TTTCGGGTACGG 908
Query 1023 GCTTGCGTTCTTGGGTGTTGCGTATTACAATCACTGC-AAGTTACAGGCGTTGAAGGCTA 1081
| ||||||| ||||| |||||||||||||| ||| || ||||||||||| ||||||||||
Sbjct 909 GATTGCGTTTTTGGGAGTTGCGTATTACAACCAC-GCGAAGTTACAGGCCTTGAAGGCTA 967
Query 1082 A-G-G-ATGCTCAGAAGAAGGTTCAGCAAGGTGATGAAGA-AGAAGCTGGGAAGCTTTTG 1137
| | | | | |||||||||||||||||| |||||| || || | | || |||| |
Sbjct 968 AAGAGGAGGAGAAGAAGAAGGTTCAGCAAGCTGATGAGGAGAGTGG-TCGGTTGCTT--G 1024
Query 1138 GAAGAGAGGGAAAGTGA 1154
||||||||||| ||||
Sbjct 1025 -AAGAGAGGGAAGGTGA 1040
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 57630540685
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5