BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G32850.8 Length=2677 Score E Sequences producing significant alignments: (Bits) Value Ahg491411 jgi|Araly1|491411|fgenesh2_kg.7__844__AT4G32850.6 3823 0.0 Ahg320377 jgi|Araly1|320377|fgenesh1_pm.C_scaffold_4000434 1853 0.0 > Ahg491411 jgi|Araly1|491411|fgenesh2_kg.7__844__AT4G32850.6 Length=3048 Score = 3823 bits (2070), Expect = 0.0 Identities = 2277/2372 (96%), Gaps = 33/2372 (1%) Strand=Plus/Plus Query 19 ctctctctctctccatctccctcatacctccttcttcttcttgatccatcatctctctct 78 ||||||||||||||||||||||||| ||||||||||||||| ||| | ||||||||||| Sbjct 1 CTCTCTCTCTCTCCATCTCCCTCATGCCTCCTTCTTCTTCTCGAT-C--CATCTCTCTCT 57 Query 79 ctttctctcttctctctGTTCCTAGTCCATCGATTTAACCTCTTTCAGATTCTCCTTCTT 138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 58 CTTTCTCTCTTCTCTCTGTTCCTAGTCCATCGATTTAACCTCTTTCAGATTCTCCTTCTT 117 Query 139 CTTTGACtttt-tttGACACCGTAGTCTCTTTCCCCTTCCATCGATTTAGGGTTTCCGAT 197 ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 118 CTTTGACTTTTCTTTGACACCGTAGTCTCTCTCCCCTTCCATCGATTTAGGGTTTCCGAT 177 Query 198 TTTCAAAATCTCCTTT-TTATTTGTTTCCTCTCCTTGTGCAATTCCCGTCTCGAATCCAT 256 ||||||||| |||||| || |||| ||||||||||| | ||| || | ||||||| ||| Sbjct 178 TTTCAAAATTTCCTTTCTTTTTTG-TTCCTCTCCTTCTACAA-TCTC--CTCGAATTCAT 233 Query 257 CTTGACC-TGG-GG-GTCTGATCCGATCTCCCTCTAATCATATCGTGAAGCGAGATTATG 313 ||||||| || || |||||||||||||| | | | || | | || | |||| Sbjct 234 CTTGACCAAGGAGGCGTCTGATCCGATCT--C-C----C---TC--G-A--GA-A-TATG 276 Query 314 TTTTTGTGCTGCGCTTCTGCTTTGATCGCTTAGGA-TTATCAATCGTGTTATGATGGTGG 372 |||||||||||| |||||||||||||||| ||||| || | ||||||||||||||||||| Sbjct 277 TTTTTGTGCTGCTCTTCTGCTTTGATCGCCTAGGATTTGT-AATCGTGTTATGATGGTGG 335 Query 373 GTACTCAAAATTTAGGTGGTTCGTTGCCGCCGCTGAATTCTCCTAAAAGCTATGGAATTA 432 |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 336 GTACACAAAATTTAGGTGGTTCGTTGCCGCCGCTGAATTCCCCTAAAAGCTATGGAATTA 395 Query 433 CGAAGCCGCTCTCTCTTGCTGGGCCTTCTTCGGCGGATATTAAGCGTAATGTGGAGCTGG 492 ||||||||||||| |||||||| || || ||||||||||||||||||||||| ||||||| Sbjct 396 CGAAGCCGCTCTCGCTTGCTGGCCCCTCCTCGGCGGATATTAAGCGTAATGTCGAGCTGG 455 Query 493 AGAAGTACTTGGTTGATGAGGGACTCTACGAGAGCAAGGATGATACCATGCGGCGAGAGG 552 |||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||| Sbjct 456 AGAAGTACTTGGTTGATGAGGGACTCTACGAGAGCAAGGACGATACCATGCGGAGAGAGG 515 Query 553 AAGTTCTAGGACGCATCGATCAGATTGTAAAGCACTGGGTGAAACAGTTAACGCAGCAAA 612 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 516 AAGTTCTGGGACGCATTGATCAGATTGTAAAGCACTGGGTGAAACAGTTAACGCAGCAAA 575 Query 613 GAGGATATACTGATCAGATGGTGGAAGATGCAAATGCTGTCATTTTCACCTTTGGATCCT 672 |||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 576 GAGGATATACAGATCAGATGGTGGAGGATGCAAATGCTGTCATTTTCACCTTTGGATCCT 635 Query 673 ACCGACTTGGCGTGCATGGTCCTGGGGCTGACATTGATACTTTGTGTGTTGGGCCATCTT 732 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 636 ACCGACTTGGCGTGCATGGTCCTGGGGCTGACATTGATACTTTGTGTGTTGGGCCATCTT 695 Query 733 ATGTTAACCGGGAGGAGGATTTCTTCATCATCTTGCATGATATATTGGCTGAGATGGAAG 792 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 696 ATGTTAACCGGGAGGAGGATTTCTTCATCATCTTGCATGATATATTGGCTGAGATGGAAG 755 Query 793 AAGTGACTGAGCTCCATCCTGTTCCCGATGCCCATGTTCCGGTCATGAAATTTAAGTTTC 852 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 756 AAGTGACTGAGCTCCATCCTGTTCCCGACGCCCATGTTCCGGTCATGAAATTTAAGTTTC 815 Query 853 AAGGAATACCGATTGATCTGCTCTATGCTAGCATATCACTTTTAGTTGTGCCACAGGATC 912 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 816 AAGGAATACCGATTGATCTGCTCTATGCTAGCATATCACTTTTAGTTGTGCCACAGGATC 875 Query 913 TGGATATCTCCAGCTCTTCTGTGCTGTGTGAAGTTGATGAGCCAACCGTTCGAAGTCTTA 972 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 876 TGGATATCTCCAGCTCTTCTGTGCTGTGTGATGTTGATGAGCCAACCGTTCGAAGTCTTA 935 Query 973 ATGGTTGTAGAGTTGCTGATCAGATTCTTAAACTCGTTCCAAATTTTGAGCACTTCCGGA 1032 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 936 ATGGTTGTAGAGTTGCTGATCAGATTCTGAAACTCGTTCCAAATTTTGAGCACTTCCGGA 995 Query 1033 CAACCTTAAGATGCCTGAAGTACTGGGCTAAGAAGCGTGGGGTGTATTCAAATGTGACTG 1092 |||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| Sbjct 996 CAACTTTAAGATGCCTGAAGTATTGGGCTAAGAAGCGTGGCGTGTATTCAAATGTGACTG 1055 Query 1093 GATTTCTTGGCGGTGTAAACTGGGCACTTTTGGTTGCTCGTGTCTGCCAGCTTTATCCAA 1152 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1056 GATTTCTTGGCGGTGTAAACTGGGCACTTTTGGTTGCTCGTGTCTGCCAGCTCTATCCAA 1115 Query 1153 ATGCAATTCCTAGTATGCTGGTTTCTCGtttttttAGAGTATATACTCAATGGCGGTGGC 1212 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 1116 ATGCAATTCCTAGTATGCTGGTTTCTCGTTTTTTCAGAGTGTATACTCAATGGCGGTGGC 1175 Query 1213 CGAACCCAGTCATGCTTTGTGCAATAGAAGAGGATGAGCTTGGATTTCCTGTCTGGGACC 1272 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1176 CGAACCCAGTCATGCTTTGTGCAATAGAAGAGGATGAGCTTGGATTTCCTGTCTGGGACC 1235 Query 1273 GTCGTAAGAATCATCGCGACCGCTATCACCTTATGCCAATAATAACTCCAGCTTACCCAT 1332 |||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1236 CTCGTAAAAATCATCGTGACCGCTATCACCTTATGCCAATAATAACTCCAGCTTACCCAT 1295 Query 1333 GCATGAATTCTAGTTACAATGTCTCTCAAAGCACTCTTCGCGTTATGACAGAGCAGTTCC 1392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1296 GCATGAATTCTAGTTACAATGTCTCTCAAAGCACTCTTCGCGTTATGACAGAGCAGTTCC 1355 Query 1393 AGTTTGGTAACAATATCTTGCAGGAGATTGAATTAAATAAACAGCACTGGAGCTCTTTAT 1452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1356 AGTTTGGTAACAATATCTTGCAGGAGATTGAATTAAATAAACAGCACTGGAGCTCTTTAT 1415 Query 1453 TTGAACAATATATGTTTTTCGAGGCATACAAAAACTACCTTCAGGTTGATATAGTGGCAG 1512 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1416 TTGAACAATATATGTTTTTCGAGGCATATAAAAACTACCTTCAGGTTGATATAGTGGCAG 1475 Query 1513 CAGATGCAGAAGATTTATTGGCTTGGAAGGGTTGGGTGGAGTCGCGGTTCAGACAGCTGA 1572 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1476 GAGATGCAGAAGATTTATTGGCTTGGAAGGGTTGGGTGGAGTCGCGGTTCAGACAGCTGA 1535 Query 1573 CCTTAAAGATAGAAAGAGACACTAATGGGATGTTAATGTGCCATCCCCAACCAAATGAGT 1632 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1536 CCTTAAAGATAGAAAGAGACACTAATGGGATGTTAATGTGCCATCCCCAACCAAATGAGT 1595 Query 1633 ATGTAGACACGGCTAGGCAGTTTCTGCATTGTGCCTTTTTCATGGGCTTGCAGAGGGCAG 1692 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1596 ATGTAGACACGGCTAGGCAGTTTCTGCATTGTGCCTTTTTCATGGGCTTGCAGAGGGCAG 1655 Query 1693 AGGGAGTTGGGGGTCAAGAATGTCAACAGTTTGATATACGTGGTACTGTCGATGAGTTCA 1752 |||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 1656 AGGGAGTTGGTGGTCAAGAATGTCAACAATTTGATATACGTGGTACGGTCGATGAGTTCA 1715 Query 1753 GACAAGAAGTAAACATGTATATGTTTTGGAAACCTGGGATGGATGTTTTCGTTTCTCATG 1812 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 1716 GACAAGAAGTAAACATGTATATGTTCTGGAAACCTGGGATGGATGTGTTCGTTTCTCATG 1775 Query 1813 TTCGTAGACGACAGCTTCCACCTTTTGTTTTCCCTAATGGATATCGAAGGCCTCGGCAGT 1872 ||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| Sbjct 1776 TTCGTAGACGACAGCTTCCTCCTTTTGTTTTCCCAAATGGATATCGAAGGCCTCGGCAGT 1835 Query 1873 CCAGGCACCAAAATCTACCGGGTGGAAAATCTGGTGAAGATGGCAGTGTTTCTCATTCCG 1932 ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| | Sbjct 1836 CCAGGCACCAAAATCAACCGGGTGGAAAATCTGGTGAAGATGGCACTGTTTCTCATTCTG 1895 Query 1933 GCTCTGTGGTGGAGAGGCATGCCAAGCGAAAGAACGATAGTGAAATGATGGATGTGAGGC 1992 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct 1896 GCTCTGTGGTGGAGAGGCATGCCAAGAGAAAGAACGATAGTGAAATGATGGATGCGAGGC 1955 Query 1993 CAGAGAAACCTGAGAAGCGTGCATCTCTTAGTCCACAGAGTCTAGATATAGTTTCTCCTG 2052 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1956 CAGAGAAACCTGAGAAGCGTGCATCTCTTAGTCCACAGAGTCTAGATATAGTTTCTCCTG 2015 Query 2053 AAAATAGTGCTATCACAACTGGTTGGACTCCTCCTGTTTGCAACCTTAGAAGGCCACCAA 2112 ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2016 AAAGTAGTGCTATCACTACTGGTTGGACTCCTCCTGTTTGCAACCTTAGAAGGCCACCAA 2075 Query 2113 GCGAGGAAATAGAAGCTGATAATTTGAACACTGAGTGTACTGAACTCACAGACTTAGCTC 2172 ||||||||||||||||||| ||||||||||| |||||||||||||||||| |||| |||| Sbjct 2076 GCGAGGAAATAGAAGCTGAAAATTTGAACACCGAGTGTACTGAACTCACAAACTTTGCTC 2135 Query 2173 GAAATGAGTGTAACTCTGGCAGCGAGCAAGTTCTTGAAGTAGATAGTATGGCTGTAGTTC 2232 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2136 GAAATGAGTGTAACTCTGGCAGCGAGCAAGTTCTTGAAGTAGATAGTATGGCTCTAGTTC 2195 Query 2233 AAGAATGCTCTGATCCTGCTGAGCCTTTGGGAAAGTGTGTAACACCTGACTCT-GTTGAT 2291 |||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||| Sbjct 2196 AAGAATGCTCTGATCCGGCTGAGCCTTTGGGAAAGTGTGTAACACCTGACTCTAGT-GAT 2254 Query 2292 GTGGTAGCATGTGTAAGTGGGCAGGAAGAAAACTTAGATCGTAATTTGAGGTCTGTATCC 2351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2255 GTGGTAGCATGTGTAAGTGGGCAGGAAGAAAACTTAGATCGTAATTTGAGGTCTGTATCC 2314 Query 2352 ATCAGTGGTACTGACTCCCCACTTCTTCCGAG 2383 ||||||||||||||||||| || ||||||||| Sbjct 2315 ATCAGTGGTACTGACTCCCAACCTCTTCCGAG 2346 Score = 322 bits (174), Expect = 9e-87 Identities = 270/313 (86%), Gaps = 19/313 (6%) Strand=Plus/Plus Query 2382 AGCAGATCCTGTGGGCAGAACCGTGATTATGA-G---GGTTTCGGGTTTCCTGCTGCAAA 2437 |||||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||| Sbjct 2374 AGCAGATCTTGTGGGCAGAACCGTGATTATGAGGTTAGGTTTTGGGTTTCCTGCTGCAAA 2433 Query 2438 TTCAGATCC-TATGGGAAAGAAAAACTTGTACTCTCAAAGCGGCATGTCGGAAGACCTTC 2496 ||||||||| | |||||||| ||||||||||||||||||| ||||||||||||||||||| Sbjct 2434 TTCAGATCCGT-TGGGAAAGGAAAACTTGTACTCTCAAAGTGGCATGTCGGAAGACCTTC 2492 Query 2497 AGTCAAACTCTTTGGTGAGCGGGATGGAGAAGTCGGAAGACAGAGCTAGGTCA-GAATCT 2555 |||||||||||||||| |||||||||||||||||||||||||||||||| || | | | Sbjct 2493 AGTCAAACTCTTTGGTCAGCGGGATGGAGAAGTCGGAAGACAGAGCTAGCACAAGCAGGT 2552 Query 2556 TTC-CAGAA-GTC-ACAGA-T-AAGG-CAT---G-CTATTGACGTGAAGAAAACGGGGGA 2605 | | || ||| || | | || | | | | |||||||||||||||||||| || | Sbjct 2553 TAAGCTTAAAGTCCACTGTGTGAACGTCCTCTAGGCTATTGACGTGAAGAAAACGAGG-A 2611 Query 2606 TTTCAACTCAAATTGTTGCGTTGGACAGACGACAGAGTCCAGAAGCTTTT-GGTAAGTGA 2664 | ||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||| Sbjct 2612 TATCAACTCAAATTGTTACGGTGGACAGACGACAGGGTCCAGAAGCTTTTTGGTAAGTGA 2671 Query 2665 ATTTTTAATATGG 2677 | ||||||||||| Sbjct 2672 ACTTTTAATATGG 2684 > Ahg320377 jgi|Araly1|320377|fgenesh1_pm.C_scaffold_4000434 Length=2367 Score = 1853 bits (1003), Expect = 0.0 Identities = 1465/1688 (87%), Gaps = 31/1688 (2%) Strand=Plus/Plus Query 412 CTCCTAAAAGCTATGGAATTACGAAGCCGCTCTCTCTTGCTGGGCCTTCTTCGGCGGATA 471 ||| ||| | ||||||||| |||||||| || ||| ||||||| |||| | | || ||| Sbjct 59 CTCTTAAGACCTATGGAATCACGAAGCCACTTTCTATTGCTGGTCCTTGTGCCGCTGATG 118 Query 472 TTAAGCGTAATGTGGAGCTGGAGAAG-TACTTGGTTGATGAGGGACTCTACGAGAGCAAG 530 ||||||||||| |||| || |||||| | | ||||||||||||| ||||| ||||||||| Sbjct 119 TTAAGCGTAATTTGGAACTAGAGAAGTTTC-TGGTTGATGAGGGGCTCTATGAGAGCAAG 177 Query 531 GATGATACCATGCGGCGAGAGGAAGTTCTAGG-ACGCATCGATCAGATTGTAAAGCACTG 589 || || || |||||| ||||||||||||| || ||||| |||||||||||||| ||||| Sbjct 178 GAAGAAACTATGCGGAGAGAGGAAGTTCT-GGTGCGCATTGATCAGATTGTAAAACACTG 236 Query 590 GGTGAAACAGTTAACGCAG-CAAAGAGGATATACTGATCAGATGGTGGAAGATGCAAATG 648 ||||||||||||||| | | || || || ||||| |||||||||||||| |||||||||| Sbjct 237 GGTGAAACAGTTAACTC-GTCAGAGGGGCTATACAGATCAGATGGTGGACGATGCAAATG 295 Query 649 CTGTCATTTTCACCTTTGGATCCTACCGACTTGGCGTGCATGGTCCTGGGGCTGACATTG 708 | ||||||||||| |||||||| ||||| ||||| || || || ||| ||||||| |||| Sbjct 296 CCGTCATTTTCACTTTTGGATCTTACCGCCTTGGAGTTCACGGACCTAGGGCTGATATTG 355 Query 709 ATACTTTGTGTGTTGGGCCATCTTATGTTAACCGGGAGGAGGATTTCTTCATCATCTTGC 768 |||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct 356 ATACTTTGTGTGTTGGCCCATCTTATGTTAACCGAGAGGAGGATTTCTTCATTATCTTGC 415 Query 769 ATGATATATTGGCTGAGATGGAAGAAGTGACTGAGCTCCATCCTGTTCCCGATGCCCATG 828 |||||| |||||||| ||||||||||||||||| || || |||||| | |||||||||| Sbjct 416 GTGATATGTTGGCTGAAATGGAAGAAGTGACTGAACTTCAACCTGTTACTGATGCCCATG 475 Query 829 TTCCGGTCATGAAATTTAAGTTTCAAGGAATACCGATTGATCTGCTCTATGCTAGCATAT 888 | || ||||||||||||||||| ||||||||| ||||||||| || ||||||||||||| Sbjct 476 TCCCAGTCATGAAATTTAAGTTCCAAGGAATATTGATTGATCTTCTGTATGCTAGCATAT 535 Query 889 CACTTTTAGTTGTGCCACAGGATCTGGATATCTCCAGCTCTTCTGTGCTGTGTGAAGTTG 948 | ||| ||||| | |||||||||||||||||||||| |||||||||||||||||| || | Sbjct 536 CGCTTCTAGTTATCCCACAGGATCTGGATATCTCCAACTCTTCTGTGCTGTGTGACGTGG 595 Query 949 ATGAGCCAACCGTTCGAAGTCTTAATGGTTGTAGAGTTGCTGATCAGATTCTTAAACTCG 1008 |||| | ||| || || ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 596 ATGAACAAACTGTCCGCAGTCTTAATGGTTGTAGGGTTGCTGATCAGATTCTTAAACTCG 655 Query 1009 TTCCAAATTTTGAGCACTTCCGGACAACCTTAAGATGCCTGAAGTACTGGGCTAAGAAGC 1068 ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 656 TTCCAAATTCCGAGCACTTCCGGACAACATTAAGATGCCTGAAGTACTGGGCTAAGAAGC 715 Query 1069 GTGGGGTGTATTCAAATGTGACTGGATTTCTTGGCGGTGTAAACTGGGCACTTTTGGTTG 1128 ||||||| ||||||||||| |||||||||||||| |||||||||||||||||| |||||| Sbjct 716 GTGGGGTCTATTCAAATGTTACTGGATTTCTTGGTGGTGTAAACTGGGCACTTCTGGTTG 775 Query 1129 CTCGTG-TCTGCCAGCTTTATCCAAATGCAATTCCTAGTATGCTGGTTTCTCGttttttt 1187 | || | | |||||||||||||||||||| |||||||||||| |||||||||| |||||| Sbjct 776 CACG-GCTGTGCCAGCTTTATCCAAATGCTATTCCTAGTATGTTGGTTTCTCGATTTTTT 834 Query 1188 AGAGTATATACT-CAATGGCGGTGGCCGAACCCAGTCATGCTTTGTGCAATAGAAGAGGA 1246 || ||||||| | |||||||| ||||| || |||||||||||||||||||||||||| || Sbjct 835 AGGGTATATA-TACAATGGCGCTGGCCAAATCCAGTCATGCTTTGTGCAATAGAAGAAGA 893 Query 1247 TGAGCTTGGATTTCCTGTCTGGGACCGTCGTAAGAATCATCGCGACCGCTATCACCTTAT 1306 ||||||| | ||||| |||||||||| || || |||||||| ||||||||||| ||||| Sbjct 894 TGAGCTTAGCTTTCCAGTCTGGGACCCACGAAAAAATCATCGTGACCGCTATCATCTTAT 953 Query 1307 GCCAATAATAACTCCAGCTTACCCATGCATGAATTCTAGTTACAATGTCTCTCAAAGCAC 1366 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 954 GCCAATAATAACTCCTGCATACCCATGCATGAATTCTAGTTACAATGTCTCTCAAAGCAC 1013 Query 1367 TCTTCGCGTTATGACAGAGCAGTTCCAGTTTGGTAACAATATCT-TGCAGGAGATTGAAT 1425 ||||| |||||||||||||| ||||||||||| |||| |||| | ||||||||||| Sbjct 1014 ACTTCGTGTTATGACAGAGCAATTCCAGTTTGGCAACACGATCTGT-CAGGAGATTGAGC 1072 Query 1426 TAAATAAACAGCACTGGAGCTCTTTATTTGAACAATATATGTT-TTTCGAGGCATACAAA 1484 |||||||| | |||||||| || |||||||| ||||||||||| ||| |||||||| ||| Sbjct 1073 TAAATAAAAAACACTGGAGTTCCTTATTTGAGCAATATATGTTCTTT-GAGGCATATAAA 1131 Query 1485 AACTACCTTCAGGTTGATATAGTGGCAGCAGATGCAGAAGATTTATTGGCTTGGAAGGGT 1544 |||||||||||||||||| || | ||| |||||| |||||||||||||| ||||| ||| Sbjct 1132 AACTACCTTCAGGTTGATGTACTAGCATTAGATGCCGAAGATTTATTGGCATGGAAAGGT 1191 Query 1545 TGGGTGGAGTCGCGGTTCAGACAGCTGACCTTAAAGATAGAAAGAGACACTAATGGGATG 1604 ||||||||||| |||||||| || |||||||| ||||||||| ||||||| ||||||||| Sbjct 1192 TGGGTGGAGTCACGGTTCAGGCAACTGACCTTGAAGATAGAACGAGACACAAATGGGATG 1251 Query 1605 TTAATGTGCCATCCC-CAACCAAATGAGTATGTAGACACGGCTAGGCAGTTTCTGCATTG 1663 ||||||||||| ||| ||||||||||||||||||||||| | | |||||||| ||||| Sbjct 1252 TTAATGTGCCA-CCCTCAACCAAATGAGTATGTAGACACTTCAAAGCAGTTTCAACATTG 1310 Query 1664 TGCCTTTTTCATGGGCTTGCAGAGGGCAGAGGGAGTTGGGGGTCAAGAATGTCAACAGTT 1723 |||||||||||||||||||||||||||||| ||| |||| || ||||||||||||||||| Sbjct 1311 TGCCTTTTTCATGGGCTTGCAGAGGGCAGAAGGATTTGGTGGCCAAGAATGTCAACAGTT 1370 Query 1724 TGATATACGTGGTACTGTCGATGAGTTCAGACAAGAAGTAAACATGTATATGTTTTGGAA 1783 |||||||||||| || || || |||||||| ||||| |||||||||||||||||||||| Sbjct 1371 TGATATACGTGGAACAGTGGACGAGTTCAGGCAAGATGTAAACATGTATATGTTTTGGAG 1430 Query 1784 ACCTGGGATGGATGTTT-TCGTTTCTCATGTTCGTAGACGACAGCTTCCACCTTTTGTTT 1842 ||||||||||||||| | | |||||||||||||| ||||| ||||||||| ||||||||| Sbjct 1431 ACCTGGGATGGATGTGTAT-GTTTCTCATGTTCGAAGACGGCAGCTTCCATCTTTTGTTT 1489 Query 1843 TCCCTAATGGATATCGAAGGCCTCGGCAGTCCAGGCACCAAAATCTACCGGGTGGAAAAT 1902 | || ||||||||| ||||||||||||||| |||||||| |||| || | || || Sbjct 1490 TTCCAAATGGATATAAAAGGCCTCGGCAGTCAAGGCACCAGAATCAACAATGCAGAGAAC 1549 Query 1903 CTGGTGAAGATGG-CAGT-GTTTCTCAT-TCCGGCTCTGTGG-TGGAGAGGCATGCCAAG 1958 ||||||| | || | || | |||| | ||| |||||| | |||| | || | ||| Sbjct 1550 CTGGTGAGGG-GGTC-GTTGCTTCTT-TGTCCAACTCTGTTGATGGATATGC--G--AAG 1602 Query 1959 CGAAAGAACGATAGTGAAATGATGGATGTGAGGCCAGAGAAACCTGAGAAGCGTGCATCT 2018 ||||||| |||| |||||| |||||| |||||||||||| |||||||||||||||| Sbjct 1603 AGAAAGAATGATAATGAAATTATGGATACCCGGCCAGAGAAACGTGAGAAGCGTGCATCT 1662 Query 2019 CTTAGTCCACAGAGTCTAGATATAGTTTCTCCTGAAAATAGTGCTATCACAACTGGTTG- 2077 | ||||||||| ||||| ||| |||||||||||| | |||| |||||| |||||| | Sbjct 1663 CGTAGTCCACATAGTCTGGATGCAGTTTCTCCTGACAGCAGTGGTATCACTACTGGT-GA 1721 Query 2078 GACTCCTC 2085 |||||||| Sbjct 1722 GACTCCTC 1729 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 100977239495 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5