BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G33860.1
Length=1950
Score E
Sequences producing significant alignments: (Bits) Value
Ahg944537 jgi|Araly1|944537|scaffold_700766.1 2841 0.0
Ahg491295 jgi|Araly1|491295|fgenesh2_kg.7__728__AT4G33840.1 1712 0.0
Ahg491296 jgi|Araly1|491296|fgenesh2_kg.7__729__AT4G33830.1 1511 0.0
> Ahg944537 jgi|Araly1|944537|scaffold_700766.1
Length=1777
Score = 2841 bits (1538), Expect = 0.0
Identities = 1698/1777 (96%), Gaps = 3/1777 (0%)
Strand=Plus/Plus
Query 4 GGTTTCTTCTTTTGATTCCACAATGAAGCGTTTGCTGCTGCTTGTTGTCCTCTGCAGCCT 63
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGTTTGTTCTTTTGATTCCACAATGAAGCGTTTGCTGCTGCTTGTTGTCCTCTGCAGCCT 60
Query 64 TTCTCTATCAAGGTGTGAATCAAAAGTCGTGCCGTATGATTATTCTGCAACCATCGAGTG 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 61 TTCTCTATCAAGGTGTGAATCAAAAGTCGTGCCGTATGATTATTCTGCAACCATAGAGTG 120
Query 124 TCTAGAGATACCTTTAAAACCACAGTACAATGGAGGAATCATCGTCAGCCCTGACGTACG 183
||||||||| ||||||||||||||||||||||||||||||||||| | ||||||| ||||
Sbjct 121 TCTAGAGATCCCTTTAAAACCACAGTACAATGGAGGAATCATCGTAAACCCTGACCTACG 180
Query 184 AGATGGCA---CCCTAGGCTGGACACCATTCGGAAACGCGAAAGTCGATTTCAGAAAAAT 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 AGATGGTGGTTCCCTAGGCTGGACACCATTCGGAAACGCGAAAGTCGATTTCAGAAAAAT 240
Query 241 TGGAAACCATAAtttttttGTTGCACGAGACAGGAAACAACCTTTTGATAGTGTCTCACA 300
|||||||||||||||| ||||||||||||||||||||||||||| ||| ||||| |||||
Sbjct 241 TGGAAACCATAATTTTGTTGTTGCACGAGACAGGAAACAACCTTATGACAGTGTTTCACA 300
Query 301 GAAGGTTTATTTGGAAAAGGGACTTCTCTACACTTTCTCTGCTTGGTTACAAGTAAGTAA 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 301 GAAGGTTTATTTGGAAAAGGGACTTCTCTACACTTTCTCTGCTTGGTTACAAGTAAGCAA 360
Query 361 AGGAAAGGCTCCTGTGAAAGCAGTTTTCAAGAAGAATGGTGAATATAAGCTTGCTGGTTC 420
||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 361 AGGAAAGGCTCCTGTGAAAGCCGTTTTCAAGAAGAATGGTGAATATAAGCATGCTGGTTC 420
Query 421 GGTTGTTGCTGAATCCAAATGCTGGTCCATGCTTAAGGGTGGTCTCACTGTTGATGAATC 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 AGTTGTTGCTGAATCCAAATGCTGGTCCATGCTTAAGGGTGGTCTCACTGTTGATGAATC 480
Query 481 TGGTCCTGCCGAACTCTATTTTGAGAGTGAAGACACAACTGTTGAGATTTGGGTTGATAG 540
||| |||||| |||||||||||||||| || || ||||||||||||||||||||||||||
Sbjct 481 TGGCCCTGCCCAACTCTATTTTGAGAGCGAGGATACAACTGTTGAGATTTGGGTTGATAG 540
Query 541 CGTCTCGTTGCAACCATTCACGCAAGAAGAGTGGAACTCTCACCATGAACAAAGCATTCA 600
|||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||
Sbjct 541 TGTCTCGTTGCAACCATTCACACAAGAAGAGTGGAACTCTCACCACGAACAAAGTATTCA 600
Query 601 GAAGGAGAGAAAGAGAACCGTGAGAATCAGAGCCGTGAACAGCAAAGGCGAGCCAATACC 660
||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||
Sbjct 601 GAAGGAGAGAAAGAGAACCGTGAAAATCAGAGCCGTGAACAGCAAAGGCCAGCCGATACC 660
Query 661 GAAAGCAACCATTTCCATTGAACAGAGGAAACTCGGATTCCCATTCGGGTGCGAGGTAGA 720
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 AAAAGCAACCATTTCCATTGAACAGAGGAAACTCGGATTCCCATTCGGGTGCGAGGTAGA 720
Query 721 AAAGAACATTCTTGGGAACAAAGCATACCAAAACTGGTTCACTCAAAGATTTACAGTGAC 780
|||||||||||| ||||| ||||||||||||||||||||||||||||| || || |||||
Sbjct 721 AAAGAACATTCTCGGGAATAAAGCATACCAAAACTGGTTCACTCAAAGGTTCACGGTGAC 780
Query 781 AACTTTCGCGAACGAGATGAAATGGTACAGCACAGAAGTTGTAAGAGGCAAAGAGGACTA 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 781 AACTTTCGCGAACGAGATGAAATGGTACAGCACAGAAGTTGTAAGAGGCAAAGAGGATTA 840
Query 841 TTCAACGGCTGACGCGATGTTGCGATTCTTCAAGCAGCATGGGGTTGCTGTACGTGGCCA 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 CTCAACGGCTGACGCGATGTTGCGATTCTTCAAGCAGCATGGGGTTGCTGTACGTGGCCA 900
Query 901 CAATATTTTATGGAATGATCCTAAGTACCAACCTAAATGGGTGAATGCTCTGTCTGGTAA 960
||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||
Sbjct 901 CAATATTTTATGGAATGATCCTAAGTATCAACCTGGATGGGTGAATTCTCTGTCTGGTAA 960
Query 961 CGACCTCTACAACGCTGTGAAACGAAGGGTTTTCTCGGTGGTCTCACGATACAAAGGCCA 1020
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 961 CGACCTCTACAACGCTGTGAAACGAAGGGTTTTCTCGGTGGTCTCACGATACAAGGGCCA 1020
Query 1021 GCTTGCGGGTTGGGACGTTGTGAATGAGAATCTCCATTTCTCCTACTTTGAGGACAAGAT 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 GCTTGCGGGTTGGGACGTTGTGAATGAGAATCTCCATTTCTCCTACTTTGAGGACAAGAT 1080
Query 1081 GGGTCCTAAAGCCTCATATAACATCTTTAAGATGGCGCAAGCTTTTGATCCTACGACAAC 1140
|||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1081 GGGTCCTAAAGCCTCATATAACATCTTTAAGATGGCGCAAGCGTTTGATCCAACGACAAC 1140
Query 1141 CATGTTTATGAATGAATACAATACGTTAGAGGAATCAAGCGATTCAGATTCTAGTCTAGC 1200
|| |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct 1141 CAAGTTTATGAATGAATACAATACGTTAGAGGAATCAAGAGATTCAGATTCTAGTCCAGC 1200
Query 1201 AAGGTATTTACAGAAGCTTAGGGAGATTAGATCTATCCGAGTTTGTGGTAACATATCTCT 1260
||||||||| ||||||||||||||| |||||||||||||||||||||| |||||||| ||
Sbjct 1201 AAGGTATTTGCAGAAGCTTAGGGAGCTTAGATCTATCCGAGTTTGTGGCAACATATCGCT 1260
Query 1261 AGGGATCGGTCTCGAGTCTCATTTCAAGACTCCTAACATTCCGTACATGAGATCAGCTCT 1320
||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1261 AGGGATCGGCCTCGAGTCTCATTTCAAGACTCCAAACATTCCATACATGAGATCAGCTCT 1320
Query 1321 TGACACTCTTGCCGCTACTGGTTTGCCTATATGGCTTACTGAGGTTGACGTCGAAGCTCC 1380
|||||||||||| || |||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 1321 TGACACTCTTGCTGCCACTGGTTTGCCTATTTGGCTCACTGAGGTTGACGTCGAAGCTCC 1380
Query 1381 TCCAAATGTCCAAGCCAAGTATTTTGAGCAGGTCCTAAGGGAAGGCCACGCACATCCGCA 1440
|||||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct 1381 TCCAAATGTCCAGGCCAAGTATTTTGAGCGGGTCCTAAGGGAAGGCCACGCGCATCCGCA 1440
Query 1441 AGTGAAAGGAATAGTGACGTGGTCAGGTTATTCTCCATCAGGTTGCTACCGAATGTGCCT 1500
||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 1441 AGTGAAAGGAATAGTAACGTGGTCTGGTTATTCTCCATCAGGTTGCTACAGAATGTGCCT 1500
Query 1501 AACCGATGGAAACTTCAAGAACGTACCCACTGGTGACGTTGTGGACAAACTTCTCCATGA 1560
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| ||
Sbjct 1501 AACCGATGGAAACTTCAAGAACTTACCCACTGGAGACGTTGTGGACAAACTTCTCCACGA 1560
Query 1561 ATGGGGAGGCTTCCGCAGACAAACCACAGGTGTCACTGATGCTGATGGATACTTTGAAGC 1620
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1561 ATGGGGAGGCTTCCGCAGACAAACCACAGGTGTCACTGATGCTGACGGATACTTTGAAGC 1620
Query 1621 TTCTCTCTTCCATGGTGACTACGATCTCAAGATTGCTCATCCTCTCACCAATTCAAAAGC 1680
|||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||
Sbjct 1621 TTCTCTCTTCCATGGTGACTACGATCTCAAAATTGATCATCCTCTCACCAATTCAAAAGC 1680
Query 1681 TTCTCACAGCTTTAAGCTGACTTCTGATGTCTCTTCCTCACAGAATCAACCATCTTCTTT 1740
|||||| |||||||||||||||||||||||||| |||||| ||| |||| |||| |||||
Sbjct 1681 TTCTCATAGCTTTAAGCTGACTTCTGATGTCTCCTCCTCAGAGACTCAAGCATCCTCTTT 1740
Query 1741 TGTCTTTCGTGTTTAAGAAGCCAAGTATAAAACTACT 1777
||| |||||||||||||||||||||||||||||||||
Sbjct 1741 TGTTTTTCGTGTTTAAGAAGCCAAGTATAAAACTACT 1777
> Ahg491295 jgi|Araly1|491295|fgenesh2_kg.7__728__AT4G33840.1
Length=1930
Score = 1712 bits (927), Expect = 0.0
Identities = 1539/1826 (84%), Gaps = 75/1826 (4%)
Strand=Plus/Plus
Query 20 TCC-ACAATGAAGCGTT-TGCTGCTGCTTG-TTGTCC-TCTGCAGCCTTTCTCTATCAAG 75
||| |||||||||| || | ||||||| || ||| || ||||| | || |||||||||||
Sbjct 1 TCCTACAATGAAGC-TTCTACTGCTGC-TGCTTG-CCTTCTGCTGTCTATCTCTATCAAG 57
Query 76 GTGTGAATCAAAAGT-CGTGCCGTATGATTATTCTGCAACCATCGAGTGTCTAGAGATA- 133
||||||| |||| | ||| || |||||||| || ||||| || |||||||| | ||||
Sbjct 58 GTGTGAA-GAAAAATCCGTCCCTTATGATTACTCGGCAACAATAGAGTGTCT-G-GATAC 114
Query 134 CCTTTA-AAACCACAGTACAATGGAGGAATCATCGTCAGCCCTGACGTACGAGATGGCAC 192
|| ||| ||||||||||||| |||||| |||||||| | |||||| | | | |||| |
Sbjct 115 CCCTTATAAACCACAGTACAGTGGAGGGATCATCGTGAATCCTGACCTGCAAAATGGTTC 174
Query 193 CCTAGGCTGGACACCATTCGGAAACGCGAAAGTCGATTTCAGAAAAATTGGAAACCATAA 252
||||||||| ||| ||||||||| || ||||| ||||||||| ||||| | ||||
Sbjct 175 ACTAGGCTGGTCACAATTCGGAAATGCCAAAGTTGATTTCAGAGGGTTTGGAGGCAATAA 234
Query 253 tttttttGTTG-CACGAGACAGGAAACAACCTTTTGATAGTGTCTCACAGAAGGTTTATT 311
||| |||||| ||| | | ||||| ||| ||| ||| || ||||||||||||||||| |
Sbjct 235 GTTTGTTGTTGCCAC-ACAGAGGAATCAATCTTCTGACAGCGTCTCACAGAAGGTTTACT 293
Query 312 TGGAAAAGGGACTTCTCTACACTTTCTCTGCTTGGTTACAAGTAAGTAAAGGAAAGGCTC 371
||||||| ||| |||||||||||||||| ||||||||||||||||| | |||||| ||||
Sbjct 294 TGGAAAAAGGAATTCTCTACACTTTCTCGGCTTGGTTACAAGTAAGCAGAGGAAAAGCTC 353
Query 372 CTGTGAAAGCAGTTTTCAAGAAGAATGGTGAATATAAGCT-TGCTGGTTCGGTTGTTGCT 430
| |||| || ||||||||||| ||||||||||||||| | ||| ||||| |||||||||
Sbjct 354 CCGTGAGTGCCGTTTTCAAGAAAAATGGTGAATATAAG-TATGCCGGTTCTGTTGTTGCT 412
Query 431 GAATCCAAATGCTGGTCCATGCTTAAGGGTGGTCTCACTGTTGATGAATCTGGTCCTGCC 490
||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 413 GAATCCAAATGCTGGTCCATGCTCAAAGGTGGTCTCACTGTTGATGAATCTGGTCCTGCT 472
Query 491 GAACTCTATTTTGAGAGTGAAG-ACACAACTGTTGAGATTTGGGTTGATAGCGTCTCGTT 549
|| ||||| |||||||| | || ||||||| ||||| |||||||||||||||||||| ||
Sbjct 473 GATCTCTACTTTGAGAGCG-AGAACACAACAGTTGACATTTGGGTTGATAGCGTCTCTTT 531
Query 550 GCAACCATTCACGCAAGAAGAGTGGAACTCTCACCATGAACAAAGCATT--CAGAAG-GA 606
|||||| ||||| |||||||||||| |||||||||| ||||| |||||| || ||| |
Sbjct 532 GCAACCTTTCACACAAGAAGAGTGGGACTCTCACCACGAACAGAGCATTGACA-AAGCAA 590
Query 607 GAGAAAGAGAACCGTGAGAATCAGAGCCGTGAACAGCAAAGGCGAGCCAATACCGAAA-G 665
|| |||| | ||||||| ||||||| | |||| | |||||||||| | ||||| ||| |
Sbjct 591 GA-AAAG-GTTCCGTGAGGATCAGAGTCATGAATAACAAAGGCGAGACGATACC-AAACG 647
Query 666 CAACCATTTCCATTGAACAGAGGAAACTCGGATTCCCATTCGGGTGCG-AGGTAGAAAAG 724
||||||| ||||| ||||||| |||||| ||||||||||||||||||| | ||||||||
Sbjct 648 CAACCATATCCATAGAACAGAAGAAACTTGGATTCCCATTCGGGTGCGCA-GTAGAAAAC 706
Query 725 AACATTCTTGGGAA-CAAAGCATACCAAAACTGGTTCACTCAAAGATTTACAGTGACAAC 783
||||| |||||||| | ||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 707 AACATACTTGGGAATC-AAGCATACCAAAACTGGTTCACTCAGAGATTTACCGTGACAAC 765
Query 784 TTTCGCGAACGAGATGAAATGGTACAGCACAG-AAGTTGTAAGAGGCAAAGAGGACTATT 842
||||| |||||||||||||||||||||||||| ||| |||||||| ||||||| || |
Sbjct 766 TTTCGGGAACGAGATGAAATGGTACAGCACAGAAAG-AATAAGAGGCCAAGAGGATTACT 824
Query 843 CAACGGCTGACGCGATGTTGCGATTCTTCAAGCAGCATGGGGTTGCTGTACGTGGCCACA 902
| || |||||||||||||| | ||||||||||| || ||| ||||||||||||| ||||
Sbjct 825 CGACAGCTGACGCGATGTTTAGTTTCTTCAAGCAACACGGGATTGCTGTACGTGGGCACA 884
Query 903 ATATTTTATGGAATGATCCTAAGTACCAACCTAAATGGGTGAATGCTCTGTCTGGTAACG 962
||||||||||| ||||||| | ||| |||||| |||||||||| ||||||| || |||
Sbjct 885 ATATTTTATGGGATGATCCCAGGTATCAACCTGGATGGGTGAATTCTCTGTCCCGTGACG 944
Query 963 ACCTCTACAACGCTGTGAAACGAAGGGTTTTCTCGGTGGTCTCACGATACAAAGGCCAGC 1022
| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 945 ATCTCTACAACGCCGTGAAACGAAGGGTTTTCTCGGTGGTCTCACGATACAAAGGTCAGC 1004
Query 1023 TTGCGGGTTGGGACGTTGTGAATGAGAATCTCCATTTCTCCTACTTTGAG-GACAAGATG 1081
|| | |||||||| |||||||||||||||||||||||||||| ||||||| | |||| ||
Sbjct 1005 TTACTGGTTGGGATGTTGTGAATGAGAATCTCCATTTCTCCTTCTTTGAGAG-CAAGTTG 1063
Query 1082 GGTCCTAAAGCCTCATATAACATCTTTAAG-A-TGGCGCAAGCTTTTGATCCTACG-ACA 1138
|||||||||||||| ||||||| | | | | | |||| || || || ||||| ||| |||
Sbjct 1064 GGTCCTAAAGCCTCTTATAACA-CAT-ACGCAATGGCCCATGCCTTCGATCC-ACGGACA 1120
Query 1139 ACCATGTTTATGAATGAATACAATACGTTAGAGGAATC-AAGCGATTCAGA-TTCTAGTC 1196
|| ||||| |||||||||| |||||||||||| || | || |||| | | ||||||||
Sbjct 1121 ACAATGTTCCTGAATGAATATAATACGTTAGAGCAACCTAAT-GATTTA-ACTTCTAGTC 1178
Query 1197 TAGCAAGGTATTTACAGAA-GCTTAGGGAGATT-AGATCTATCCGAGTTTGT-GGTAACA 1253
|||||||||||| ||| |||||||||| || | |||||| || ||| | || || |
Sbjct 1179 CAGCAAGGTATTTGG-GAAAGCTTAGGGAGCTTCA-ATCTATTCGGGTT-GCCGGAAAGA 1235
Query 1254 TATCTC-T-AGGGATCGGTCTCGAGTCTCATTTCAAG-ACTCCTAACATTCCGTACATGA 1310
| || | | |||||| ||||| ||||||||||||| | ||||||||||||||||| ||||
Sbjct 1236 T-TC-CGTTAGGGATAGGTCTTGAGTCTCATTTCA-GCACTCCTAACATTCCGTATATGA 1292
Query 1311 GATCAGCTCTTGACACTCTTGCCGCTACTGGTTTGCCTATATGGCTTACTGAGGTTGACG 1370
||||||||||||| ||||||| || |||||||||||||| ||||| |||||||| ||||
Sbjct 1293 GATCAGCTCTTGATACTCTTGGTGCCACTGGTTTGCCTATTTGGCTCACTGAGGTAGACG 1352
Query 1371 TCGAAGCTCCTCCAAATGTCCAAG-CCAAGTATTTTGAGCAGGTCCTAAGGGAAGGCCAC 1429
| || || ||||| ||||||| | |||||||||| ||||| || ||||||||||||||
Sbjct 1353 TTGATGCGCCTCCCAATGTCCG-GTCCAAGTATTTCGAGCAAGTTCTAAGGGAAGGCCAT 1411
Query 1430 GCACATCCGCAAG-TGAAAGGAATAGTGACGTGGTCAGGTTATTCTCCATCAGGTTGCTA 1488
|| |||||| ||| |||||||||| |||| |||| |||||||||| ||||||||||||||
Sbjct 1412 GCGCATCCG-AAGGTGAAAGGAATGGTGATGTGGACAGGTTATTCACCATCAGGTTGCTA 1470
Query 1489 CCGAATGTGCCTAACCGATGGAAACTTCAAGAACGTACCCACTGGTGACGTTGTGGACAA 1548
| |||||||||| ||||||||||||||||||||| |||||||||| || || ||||||||
Sbjct 1471 CAGAATGTGCCTCACCGATGGAAACTTCAAGAACCTACCCACTGGAGATGTCGTGGACAA 1530
Query 1549 ACTTCTCCATGAATGGGGAGG-CTTCCGCAGACAAACCACAGGTGTCACTGATGCTGATG 1607
||||| | |||||||||||| |||| |||| |||||||| ||||||||||||||| |||
Sbjct 1531 GCTTCTACGTGAATGGGGAGGGCTTC-GCAGCCAAACCACCGGTGTCACTGATGCTAATG 1589
Query 1608 GATACTTTGAAGCTTCTCTCTTCCATGGTGACTACGATCTCAAGAT-TGCTCATCCTCTC 1666
| | |||||||||||| ||||| ||||||||||| ||||| || || | |||||||||||
Sbjct 1590 GGTTCTTTGAAGCTTCACTCTTTCATGGTGACTATGATCTTAATATAT-CTCATCCTCTC 1648
Query 1667 ACCAATTCAAAAGCTTCTCACAGCTTTAAGCTGACTTCTGATGTCTCTTCCTC-ACAGAA 1725
|||||||||||| ||||| ||| ||| | | ||||| |||||| ||| || || | |||
Sbjct 1649 ACCAATTCAAAATCTTCTTACAACTTCACGTTGACTCCTGATGACTCCTC-TCCAAAGAC 1707
Query 1726 TCAACCATCTTCT-TTTGTCTTTCGTGTTTAAGAAGCCAAGTATAAAACTACTTTATAAT 1784
||||||||| || |||||| ||||| ||| |||||| |||| || ||||||||| || |
Sbjct 1708 CCAACCATCT-CTATTTGTCGTTCGTATTTGAGAAGCTAAGTTTACAACTACTTTGTATT 1766
Query 1785 TGAGCTAGCTAGTTTGATTCTTTAGT 1810
|||| ||| | || ||||||| |||
Sbjct 1767 TGAG-TAG-T--TT-GATTCTT-AGT 1786
> Ahg491296 jgi|Araly1|491296|fgenesh2_kg.7__729__AT4G33830.1
Length=1776
Score = 1511 bits (818), Expect = 0.0
Identities = 1388/1659 (84%), Gaps = 55/1659 (3%)
Strand=Plus/Plus
Query 122 TGTCTAGAGATA-CCTTTA-AAACCACAGTACAATGGAGGAATCATCGTCAGCCCTGACG 179
||||| | |||| || ||| |||||||||||||||||||| |||||||| | ||||||
Sbjct 145 TGTCT-G-GATACCCCTTATAAACCACAGTACAATGGAGGGATCATCGTGAATCCTGACC 202
Query 180 TACGAGATGGCACCCTAGGCTGGACACCA-TTCGGAAACGCGAAAGTCGATTTCAGAAAA 238
| | | |||| | ||||||||| || || || ||||| || ||||||||||||||| ||
Sbjct 203 TGCAAAATGGTTCACTAGGCTGGTCA-CAGTTTGGAAATGCCAAAGTCGATTTCAGAGAA 261
Query 239 ATTGGAAACCATAAtttttttGTTG-CACGAGACAGGAAACAACCTTTTGATAGTGTCTC 297
||||| | |||| ||| |||||| ||| | | ||||| ||| ||| ||| || |||||
Sbjct 262 TTTGGAGGCAATAAGTTTGTTGTTGCCAC-ACAGAGGAATCAATCTTCTGACAGCGTCTC 320
Query 298 ACAGAAGGTTTATTTGGAAAAGGGACTTCTCTACACTTTCTCTGCTTGGTTACAAGTAAG 357
||||| |||||| |||||||| ||| |||| ||||||||||| |||||||||||||||||
Sbjct 321 ACAGATGGTTTACTTGGAAAAAGGAATTCTTTACACTTTCTCGGCTTGGTTACAAGTAAG 380
Query 358 TAAAGGAAAGGCTCCTGTGAAAGCAGTTTTCAAGAA-GAATGGTGAATATAAGCTTGCTG 416
| |||||| |||| |||| || |||||||| || ||||||||| |||||| ||| |
Sbjct 381 CATAGGAAAATCTCCGGTGAGCGCCGTTTTCAA-AATAAATGGTGAAGATAAGCATGCCG 439
Query 417 GTTCGGTTGTTGCTGAATCCAAATGCTGGTCCATGCTTAAGGGTGGTCTCACTGTTGATG 476
||||||||||||||||||||| ||||||||| |||||||| |||||| ||||||||||||
Sbjct 440 GTTCGGTTGTTGCTGAATCCAGATGCTGGTCGATGCTTAAAGGTGGTATCACTGTTGATG 499
Query 477 AATCTGGTCCTGCCGAACTCTATTTTGAGAGTGAAGACACAACTGTTGAGATTTGGGTTG 536
|||||||||||||||| ||||| |||||||| || |||||| | ||||||||||||||||
Sbjct 500 AATCTGGTCCTGCCGATCTCTACTTTGAGAGCGAGGACACAGCGGTTGAGATTTGGGTTG 559
Query 537 ATAGCGTCTCGTTGCAACCATTCACGCAAGAAGAGTGGAACTCTCACCATGAACAAAGCA 596
|||||||||| |||||||||||||| ||| ||||||||||| ||||||| ||||| ||||
Sbjct 560 ATAGCGTCTCTTTGCAACCATTCACCCAAAAAGAGTGGAACGCTCACCAGGAACAGAGCA 619
Query 597 TTCAGAAGG-AGAGAAAGAGAA-CCGTGAGAATCAGAGCCGTGAACAGCAAAGGCGAGCC 654
|| |||||| | ||||| || ||||||||||||||| |||||| | ||||||||||
Sbjct 620 TTGAGAAGGCA-AGAAA-AGGTGCCGTGAGAATCAGAGTCGTGAATAACAAAGGCGAGA- 676
Query 655 A-ATACCGAAA-GCAACCATTTCCATTGAACAGAGGAAACTCGGATTCCCATTCGGGTGC 712
| ||||| ||| ||| ||||| |||| | ||||| | ||||||||||||||||||| ||
Sbjct 677 AGATACC-AAACGCATCCATTACCATAGTACAGAACAGACTCGGATTCCCATTCGGGAGC 735
Query 713 GAGGTAGAAAAGAACATTCTTGGGAA-CAAAGCATACCAAAACTGGTTCACTCAAAGATT 771
| |||| | ||||||| |||||||| ||| |||||||||||||||||||||||||||||
Sbjct 736 GCTGTAGCACAGAACATACTTGGGAATCAA-GCATACCAAAACTGGTTCACTCAAAGATT 794
Query 772 TACAGTGACAACTTTCGCGAACGAGATGAAATGGTACAGCACAGAAGT-TGTAAGAGGCA 830
|| |||||||| |||| ||||||||||||||||||||||| ||| | |||||||||||
Sbjct 795 CACCGTGACAACATTCGAAAACGAGATGAAATGGTACAGCACGGAA-TCTGTAAGAGGCA 853
Query 831 AAGAGGACTATTCAA-CGGCTGACGCGATGTTGCGATTCTTCAAGCAGCATGGGGTTGCT 889
|||| | ||| | | || | |||||||||||| |||||||||||||||| | |||||
Sbjct 854 TAGAGAATTATACGATCG-CGGACGCGATGTTGAGATTCTTCAAGCAGCACGACATTGCT 912
Query 890 GTACGTGGCCACAATATTTTATGGAATGATCCTAAGTACCAACCTAAATGGGTGAATGCT 949
|||||||| |||||| || ||||| | | |||||||||||| |||||||||| | | ||
Sbjct 913 GTACGTGGACACAATGTTGTATGGGACCACCCTAAGTACCAATCTAAATGGGTTACTTCT 972
Query 950 CTGTCTGGTAACGACCTCTACAACGCTGTGAAACGAAGGGTTTTCTCGGTGGTCTCACGA 1009
||||| ||||||| ||||||| || |||||||||||||||||||| |||||||| |||
Sbjct 973 CTGTCACGTAACGATATCTACAATGCAGTGAAACGAAGGGTTTTCTCTGTGGTCTCGCGA 1032
Query 1010 TACAAAGGCCAGCTTGCGGGTTGGGACGTTGTGAATGAGAATCTCCATTTCTCCTACTTT 1069
||||||||||||||||| |||||||| ||||||||||||||||| ||| ||||| ||||
Sbjct 1033 TACAAAGGCCAGCTTGCTGGTTGGGATGTTGTGAATGAGAATCTGCATCACTCCTTCTTT 1092
Query 1070 GAG-GACAAGATGGGTCCTAAAGCCTCATA-TAACATCTTTA-AGATGGCGCAAGCTTTT 1126
||| | ||| | |||||||| ||||| || ||||||||| | |||||||| || |
Sbjct 1093 GAGAGT-AAGTTTGGTCCTAACGCCTC-TAATAACATCTTCGCA-ATGGCGCATGCCATC 1149
Query 1127 GATCCTACGACAACCATGTTTATGAATGAATACAATACGTTAGAGGAATCAAGCG-AT-T 1184
||||| | |||||| ||||| |||||||||| | |||| |||||||| | | || || |
Sbjct 1150 GATCCAAGGACAACAATGTTCATGAATGAATTCTATACATTAGAGGACCCTA-CGGATCT 1208
Query 1185 CAGATTCTAGTCTAGCAAGGTATTTACAGAAGCTTAGGGAGATT-AGATCTATCCGAGTT 1243
| | | |||| ||||| |||||| ||||||||||||||| || | |||||| || |||
Sbjct 1209 GAAAG-CGAGTCCAGCAAAGTATTTGCAGAAGCTTAGGGAGCTTCA-ATCTATTCGGGTT 1266
Query 1244 TGTGGTAACATATCTC-TAGGG-ATCGGTCTCGAGTCTCATTTCAAG-ACTCCTAACATT 1300
|||| ||||| || | | ||| |||||||| ||||||||||||| | ||||||||||||
Sbjct 1267 CGTGGAAACAT-TC-CATTGGGGATCGGTCTTGAGTCTCATTTCA-GTACTCCTAACATT 1323
Query 1301 CCGTACATGAGATCAGCTCTTGACACTCTTGCCGCTACTGGTTTGCCTATATGGCTTACT 1360
|||||||||||||||| |||||| | ||||| ||| |||||||||||||| ||||| |||
Sbjct 1324 CCGTACATGAGATCAGGTCTTGATATTCTTGGCGCCACTGGTTTGCCTATTTGGCTCACT 1383
Query 1361 GAGGTTGACGTCGAAGCTCCT-CCAAATGTCCAAGCCAAGTATTTTGAGCAGGTCCTAAG 1419
||| | ||||| |||||||| || | ||| || ||||||||||||||||| ||||||||
Sbjct 1384 GAGATCGACGTTAAAGCTCCTTCCGA-TGTTCAGGCCAAGTATTTTGAGCAAGTCCTAAG 1442
Query 1420 GGAAGGCCACGCACATCCGCAAGTGAAAGGAATAGTGACGTGGTCAGGTTATTCTCCATC 1479
|||||| || || |||||||| ||||||||||| |||| |||| ||| |||||| |||
Sbjct 1443 GGAAGGACATGCGCATCCGCATGTGAAAGGAATGGTGATGTGGACAGCTTATTCACCA-- 1500
Query 1480 AGGTTGCTACCGA-ATGTGCCTAACCGATGGAAACTTCAAGAACGTACCCACTGGTGACG 1538
|| |||||||| | |||||||| || |||||||||||||||||| |||||||||| ||||
Sbjct 1501 AG-TTGCTACC-ATATGTGCCTCACTGATGGAAACTTCAAGAACCTACCCACTGGAGACG 1558
Query 1539 TTGTGGACAAACTTCTCCATGAATGGGGAGG-CTTCCGCAGACAAACCACAGGTGTCACT 1597
|||||||||| || || | |||||||||||| || | | || |||||||| || ||||||
Sbjct 1559 TTGTGGACAAGCTGCTACGTGAATGGGGAGGGCTAC-GTAGCCAAACCACTGGAGTCACT 1617
Query 1598 GATGCTGATGGATACTTTGAAGCTTCTCTCTTCCATGGTGACTACGATCTCAAGATTGCT 1657
||||||||||||| |||||||||||| ||||| ||||||||||| |||||||| ||| ||
Sbjct 1618 GATGCTGATGGATTCTTTGAAGCTTCACTCTTTCATGGTGACTATGATCTCAATATTTCT 1677
Query 1658 CATCCTCTCACCAATTCAAAAGCTTCTCACAGCTTTAAGCTGACTTCTGATGTCTCTTCC 1717
|| |||||| ||||||||||||||| | ||| ||||| | |||||||||||| ||| ||
Sbjct 1678 CACCCTCTCGCCAATTCAAAAGCTTATTACAACTTTACGTTGACTTCTGATGACTCCTCT 1737
Query 1718 TCACAGAATCAACCATCT-TCTTTTGTCTTT-CGTGTTT 1754
||||||| |||||||| | |||||||||| | |||||
Sbjct 1738 TCACAGACCCAACCATCAAT-TTTTGTCTTTTC-TGTTT 1774
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73285631380
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5