BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G34440.1 Length=2317 Score E Sequences producing significant alignments: (Bits) Value Ahg888624 jgi|Araly1|888624|Al_scaffold_0007_610 3110 0.0 Ahg927733 jgi|Araly1|927733|scaffold_300190.1 846 0.0 Ahg340394 jgi|Araly1|340394|fgenesh1_pg.C_scaffold_3000157 723 0.0 Ahg944491 jgi|Araly1|944491|scaffold_700720.1 368 1e-100 Ahg918637 jgi|Araly1|918637|Al_scaffold_0310_2 335 1e-90 > Ahg888624 jgi|Araly1|888624|Al_scaffold_0007_610 Length=2010 Score = 3110 bits (1684), Expect = 0.0 Identities = 1912/2021 (95%), Gaps = 19/2021 (1%) Strand=Plus/Plus Query 97 ATGGCGGACTCACCGGTGGATTCATCTCCTGCCCCTGAAACCTCAAATGGGACACCACCG 156 ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| || Sbjct 1 ATGGCGGACTCGCCGGTGGATTCACCTCCTGCCCCTGAAACCTCAAATGGGACACCGCCC 60 Query 157 TCAAACGGAACATCGCCGTCTAATGAGTCATCGCCGCCAACACCACCTTCTTCACCACCA 216 |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 61 TCAAACGGGACATCGCCGTCGAATGAGTCATCGCCGCCAACACCACCTTCTTCACCACCA 120 Query 217 CCATCATCAATATCTGCTCCTCCGCCAGATATCTCCGCTTCTTTTTCACCGCCGCCTGCA 276 |||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 121 CCATCATCAAAATCTGCTCCTCCGCCAGATAGCTCCGCTTCTTCTTCACCGCCGCCTGCA 180 Query 277 CCACCAACGCAAGAAACGTCACCTCCTACATCTCCGTCCTCATCGCCGCCTGTTGTAGCT 336 ||||||||||||||||| ||||||||| ||||| |||||||||| ||||||||||||||| Sbjct 181 CCACCAACGCAAGAAACCTCACCTCCTCCATCTTCGTCCTCATCCCCGCCTGTTGTAGCT 240 Query 337 AATCCGTCACCGCAGACTCCAGAGAATCCTTCTCCACCTGCACCTGAAGGCTCAACTCCT 396 |||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct 241 AATCCGCCACCGCAAACTCCAGAGAATCCTTCTCCACCTGCACCTGAAGGCTTTACTCCG 300 Query 397 GTAACGCCACCTGCACCACCACAAACACCGTCGAACCAATCACCG------GAAAGACCA 450 ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| Sbjct 301 GTAACGCCACCGGCACCACCACAAACACCGTCGAACCAATCACCGCCTTTAGAAAGACCA 360 Query 451 ACTCCTCCTTCTCCTGGTGCCAATGATGACCGAAACAGAACCAATGGCGGAAACAACAAC 510 |||||||||||||||||||||||||||||||| |||||||||||| || || ||| Sbjct 361 ACTCCTCCTTCTCCTGGTGCCAATGATGACCGTAACAGAACCAAT---GG---TAATAAC 414 Query 511 AGAGACGGCTCCACACCATCACCACCGTCGTCAGGGAACAGAACTTCCGGTGACGGTGGC 570 ||||| || |||||||| |||||||||| ||| |||||||||||||||||||| ||| || Sbjct 415 AGAGATGGTTCCACACCTTCACCACCGTTGTCTGGGAACAGAACTTCCGGTGATGGTAGC 474 Query 571 TCACCTTCACCACCTCGGTCGATAAGCCCTCCTCAGAATAGTGGAGATTCAGACTCATCA 630 |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| Sbjct 475 TCACCTTCACCACCTCGGTCAATAAGCCCTCCTCGGAATAGTGGAGATTCAGACTCATCA 534 Query 631 TCGGGTAATCATCCACAAGCCAACATTGGATTGATTATTGGAGTCCTTGTAGGAGCAGGG 690 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 535 TCGGGTAATCATCCACAAGCCAACATTGGATTGATTATTGGAGTCCTTGTAGGAGCAGGG 594 Query 691 CTTTTGCTTCTACTTGC-AGTGTGTATTTGCATCTGTTGCAACAGGAAGAAGAAGAAGAA 749 ||||||||||||||| | |||||||||||||||||||||||||| |||||||||||| || Sbjct 595 CTTTTGCTTCTACTT-CTAGTGTGTATTTGCATCTGTTGCAACAAGAAGAAGAAGAAAAA 653 Query 750 ATCTCCTCAGGTCAACCACATGCACTACTACAATAACAATCCTTATGGAGGAGCACCCTC 809 |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct 654 ATCTCCTCAGGTCAACCACATGCACTACTACAATAACAATCCTTATGGTG---CACCCTC 710 Query 810 AGGTAATGGTGGTTATTACAAGGGAACACCTCAAGATCATGTGGTGAATATGGCTGGTCA 869 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct 711 AGGTAATGGTGGTTATTACAAGGCAACACCTCAGGATCATGTGGTGAATATGGCTGGTCA 770 Query 870 AGGAGGTGGGAATTGGGGTCCACAGCAACCTGTGTCTGGTCCTCACAGTGATGCTTCCAA 929 ||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct 771 AGGAGGTGGAAATTGGGGTCCACAGCAACCTGTGTCCGGTCCTCACAGTGACACTTCCAA 830 Query 930 CTTAACCGGTCGAACTGCTATACCGTCACCTCAAGCTGCAACTCTTGGTCACAACCAAAG 989 |||||| |||||||| |||| ||| |||||||||||||| |||||||||||||||||||| Sbjct 831 CTTAACTGGTCGAACAGCTACACCCTCACCTCAAGCTGCGACTCTTGGTCACAACCAAAG 890 Query 990 CACTTTCACATACGATGAACTGTCCATTGCAACAGAAGGTTTCGCTCAGTCAAATTTGCT 1049 ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 891 CACTTTCACCTACGATGAATTGTCCATTGCAACAGAAGGTTTCGCTCAGTCAAATTTGTT 950 Query 1050 AGGACAAGGAGGATTTGGGTATGTTCATAAAGGAGTTCTGCCTAGTGGCAAAGAAGTTGC 1109 ||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct 951 AGGGCAAGGAGGATTTGGGTATGTTCATAAAGGAGTTTTGCCTGGTGGCAAAGAAGTTGC 1010 Query 1110 AGTGAAGAGTCTTAAACTTGGAAGTGGACAAGGGGAACGCGAGTTTCAAGCAGAGGTTGA 1169 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 1011 AGTGAAGAGTCTTAAACTTGGAAGCGGACAAGGTGAACGCGAGTTTCAAGCAGAGGTTGA 1070 Query 1170 TATCATTAGCCGTGTCCATCATCGTCATCTCGTTTCTCTTGTTGGATATTGCATCTCTGG 1229 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 1071 TATCATTAGCCGTGTCCATCATCGTCATCTCGTATCTCTTGTTGGATATTGCATTTCTGG 1130 Query 1230 TGGTCAAAGACTTTTGGTTTATGAGTTTATACCTAACAACACTCTTGAATTTCATCTTCA 1289 ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1131 TGGTCAAAGGCTTTTGGTTTATGAGTTTATACCTAATAACACTCTTGAATTTCATCTTCA 1190 Query 1290 TGGAAAGGGTCGTCCGGTTTTGGATTGGCCTACAAGAGTGAAGATTGCATTGGGATCAGC 1349 |||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||| Sbjct 1191 CGGAAAGGGTCGTCCGGTTCTGGATTGGCCTACACGAGTCAAGATTGCATTGGGATCAGC 1250 Query 1350 TAGAGGCCTTGCATATTTGCATGAAGACTGTCACCCTCGCATTATCCACAGAGATATCAA 1409 |||||| ||||||||||||||||||||||| || |||||||||||||| |||||||| || Sbjct 1251 TAGAGGTCTTGCATATTTGCATGAAGACTGCCATCCTCGCATTATCCATAGAGATATTAA 1310 Query 1410 AGCTGCAAACATTCTTCTTGATTTCAGTTTTGAGACCAAGGTGGCAGATTTTGGATTGGC 1469 ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| || Sbjct 1311 AGCTGCAAACATTCTTCTTGATTTCAGTTTTGAAACCAAGGTTGCAGATTTTGGATTAGC 1370 Query 1470 TAAGCTATCTCAAGACAACTATACTCATGTCTCCACTCGCGTCATGGGAACTTTTGGATA 1529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1371 TAAGCTATCTCAAGACAACTATACTCATGTCTCCACTCGCGTCATGGGAACTTTTGGATA 1430 Query 1530 CTTAGCTCCAGAGTATGCATCAAGCGGAAAGTTATCCGACAAATCTGATGTTTTCTCATT 1589 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1431 CTTAGCTCCAGAGTATGCATCAAGTGGAAAGTTATCCGACAAATCTGATGTTTTCTCATT 1490 Query 1590 TGGAGTAATGCTTCTTGAGCTCATAACCGGAAGACCTCCTCTGGATCTAACTGGAGAAAT 1649 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1491 TGGAGTAATGCTTCTTGAGCTCATAACCGGACGACCTCCTCTGGATCTAACTGGAGAAAT 1550 Query 1650 GGAAGATAGCTTGGTAGATTGGGCAAGGCCTTTGTGTTTGAAAGCAGCTCAAGATGGAGA 1709 |||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1551 GGAAGACAGCTTGGTAGACTGGGCAAGGCCTTTGTGTTTGAAAGCAGCTCAAGATGGAGA 1610 Query 1710 TTACAACCAATTGGCTGATCCACGTCTAGAGCTAAACTACAGTCATCAAGAGATGGTTCA 1769 ||||| ||||||||| ||||| ||||||||||||||||||| |||||||||||||||||| Sbjct 1611 TTACAGCCAATTGGCAGATCCGCGTCTAGAGCTAAACTACAATCATCAAGAGATGGTTCA 1670 Query 1770 AATGGCTTCTTGTGCAGCTGCAGCAATCAGACATTCAGCAAGAAGACGGCCTAAGATGAG 1829 ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 1671 AATGGCTTCTTGTGCAGCTGCAGCAATCAGACACTCAGCAAGAAGACGACCTAAGATGAG 1730 Query 1830 CCAGATTGTACGAGCACTAGAAGGAGATATGTCAATGGATGATCTAAGTGAGGGAACAAG 1889 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 1731 CCAGATTGTACGAGCACTAGAAGGAGATATGTCAATGGAGGATCTAAGTGAAGGAACAAG 1790 Query 1890 ACCAGGACAAAGCACGTACTTGAGCCCCGGGAGCGTGAGCTCAGAGTATGACGCAAGCTC 1949 |||||||||||||||||| ||||||||||| || |||||||| |||||||| |||||||| Sbjct 1791 ACCAGGACAAAGCACGTATTTGAGCCCCGGAAGTGTGAGCTCGGAGTATGATGCAAGCTC 1850 Query 1950 GTACACG-GCAGACATGAAAAAGTTCAAGAAACTGGCGTTAGAGAATAAAGAATATCAAA 2008 |||| | |||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 1851 TTACA-GTGCAGACATGAAAAAATTCAAGAAATTGGCGTTAGAGAATAAAGAATATCAAA 1909 Query 2009 GCAGTGAATATGGTGGAACAAGTGAGTATGGCTTAAACCCTTCTGCTTCAAGTAGTGAAG 2068 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1910 GCAGTGAATATGGTGGAACAAGTGAGTATGGCTTAAATCCTTCTGCTTCAAGTAGTGAAG 1969 Query 2069 AAATGAATAGAGGCTCAATGAAACGCAATCCTCAGCTTTGA 2109 ||||||||||||||||||||||||||||||||||||||||| Sbjct 1970 AAATGAATAGAGGCTCAATGAAACGCAATCCTCAGCTTTGA 2010 > Ahg927733 jgi|Araly1|927733|scaffold_300190.1 Length=618 Score = 846 bits (458), Expect = 0.0 Identities = 514/541 (95%), Gaps = 3/541 (1%) Strand=Plus/Plus Query 1555 GGAAAGTTATCCGACAAATCTGATGTTTTCTCATTTGGAGTAATGCTTCTTGAGCTCATA 1614 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 80 GGAAAGTTATCCGACAAATCCGATGTTTTCTCATTTGGAGTAATGCTTCTTGAGCTCATA 139 Query 1615 ACCGGA-AGACCTCCTCTGGATCTAACTGGAGAAATGGAAGATAGCTTGGTAGATTGGGC 1673 |||||| | |||||| ||||||||||||||||||||||| ||||||||||||| ||||| Sbjct 140 ACCGGACA-ACCTCCAGTGGATCTAACTGGAGAAATGGAATATAGCTTGGTAGACTGGGC 198 Query 1674 AAGGCCTTTGTGTTTGAAAGCAGCTCAAGATGGAGATTACAACCAATTGGCTGATCCACG 1733 ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| || Sbjct 199 AAGGCCTTTGTGTTTGAAAGCAGCTCAAGATGGTGATTACAACCAATTGGCAGATCTGCG 258 Query 1734 TCTAGAGCTAAACTACAGTCATCAAGAGATGGTTCAAATGGCTTCTTGTGCAGCTGCAGC 1793 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 259 TCTAGAGCTAAACTACAATCATCAAGAGATGGTTCAAATGGCTTCTTGTGCAGCTGCAGC 318 Query 1794 AATCAGACATTCAGCAAGAAGACGGCCTAAGATGAGCCAGATTGTACGAGCACTAGAAGG 1853 ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 319 AATCAGACACTCAACAAGAAGACGGCCTAAGATGAGCCAGATTGTACGAGCACTAGAAGG 378 Query 1854 AGATATGTCAATGGATGATCTAAGTGAGGGAACAAGACCAGGACAAAGCACGTACTTGAG 1913 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||||| Sbjct 379 AGATATGTCAATGGATGATCTAAGTGAAGGAACAAGACCAGGACAAAGCAAGTATTTGAG 438 Query 1914 CCCCGGGAGCGTGAGCTCAGAGTATGACGCAAGCTCGTACACGGCAGACATGAAAAAGTT 1973 ||||| |||||||||||||||||| |||||||||||||||| |||||||||||||| || Sbjct 439 GCCCGGAAGCGTGAGCTCAGAGTATAACGCAAGCTCGTACACCGCAGACATGAAAAAATT 498 Query 1974 CAAGAAACTGGCGTTAGAGAATAAAGAATATCAAAGCAGTGAATATGGTGGAACAAGTGA 2033 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 499 CAAGAAATTGGCGTTAGAGAATAAAGAATATCAAAGCAGTGAATATGGTGGAACAAGTGA 558 Query 2034 GTATGGCTTAAACCCTTCTGCTTCAAGTAGTGAAGAAATGAATAGAGGCTCAATGAAACG 2093 |||||| ||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| Sbjct 559 GTATGGTTTAAATCCT-CTGCTTCAAGTAGTGAAGAAATGAATAGAGGTTCAATGAAACG 617 Query 2094 C 2094 | Sbjct 618 C 618 > Ahg340394 jgi|Araly1|340394|fgenesh1_pg.C_scaffold_3000157 Length=1059 Score = 723 bits (391), Expect = 0.0 Identities = 443/468 (95%), Gaps = 3/468 (1%) Strand=Plus/Plus Query 1608 GCTCATAACCGGA-AGACCTCCTCTGGATCTAACTGGAGAAATGGAAGATAGCTTGGTAG 1666 ||||||||||||| | |||||| ||||||||||||||||||||||| |||||||||||| Sbjct 594 GCTCATAACCGGACA-ACCTCCAGTGGATCTAACTGGAGAAATGGAATATAGCTTGGTAG 652 Query 1667 ATTGGGCAAGGCCTTTGTGTTTGAAAGCAGCTCAAGATGGAGATTACAACCAATTGGCTG 1726 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct 653 ACTGGGCAAGGCCTTTGTGTTTGAAAGCAGCTCAAGATGGTGATTACAACCAATTGGCAG 712 Query 1727 ATCCACGTCTAGAGCTAAACTACAGTCATCAAGAGATGGTTCAAATGGCTTCTTGTGCAG 1786 |||| ||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 713 ATCCGCGTCTAGAGCTAAACTACAATCATCCAGAGATGGTTCAAATGGCTTCTTGTGCAG 772 Query 1787 CTGCAGCAATCAGACATTCAGCAAGAAGACGGCCTAAGATGAGCCAGATTGTACGAGCAC 1846 |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 773 CTGCAGCAATCAGACACTCAACAAGAAGACGGCCTAAGATGAGCCAGATTGTACGAGCAC 832 Query 1847 TAGAAGGAGATATGTCAATGGATGATCTAAGTGAGGGAACAAGACCAGGACAAAGCACGT 1906 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || Sbjct 833 TAGAAGGAGATATGTCAATGGATGATCTAAGTGAAGGAACAAGACCAGGACAAAGCAAGT 892 Query 1907 ACTTGAGCCCCGGGAGCGTGAGCTCAGAGTATGACGCAAGCTCGTACACGGCAGACATGA 1966 | ||||| ||||| |||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 893 ATTTGAGGCCCGGAAGCGTGAGCTCAGAGTATAACGCAAGCTCGTACACCGCAGACATGA 952 Query 1967 AAAAGTTCAAGAAACTGGCGTTAGAGAATAAAGAATATCAAAGCAGTGAATATGGTGGAA 2026 |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 953 AAAAATTCAAGAAATTGGCGTTAGAGAATAAAGAATATCAAAGCAGTGAATATGGTGGAA 1012 Query 2027 CAAGTGAGTATGGCTTAAACCCTTCTGCTTCAAGTAGTGAAGAAATGA 2074 ||||||||||||| ||||| ||| |||||||||||||||||||||||| Sbjct 1013 CAAGTGAGTATGGTTTAAATCCT-CTGCTTCAAGTAGTGAAGAAATGA 1059 > Ahg944491 jgi|Araly1|944491|scaffold_700720.1 Length=742 Score = 368 bits (199), Expect = 1e-100 Identities = 228/242 (94%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 1761 GATGGTTCAAATGGCTTCTTGTGCAGCTGCAGCAATCAGACATTCAGCAAGAAGACGGCC 1820 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 452 GATGGTTCAAATGGCTTCTTGTGCAGCTGCAGCAATCAGACACTCAGCAAGAAGACGGCC 511 Query 1821 TAAGATGAGCCAGATTGTACGAGCACTAGAAGGAGATATGTCAATGGATGATCTAAGTGA 1880 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 512 TAAGATGAGCCAGATTGTACGAGCACTAGAAGGAGATATGTCAATGGAGGATCTAAGTGA 571 Query 1881 GGGAACAAGACCAGGACAAAGCACGTACTTGAGCCCCGGGAGCGTGAGCTCAGAGTATGA 1940 ||||||||||| ||||||||||| || ||||||||||| ||||||||||| |||||||| Sbjct 572 AGGAACAAGACCGGGACAAAGCACCTATTTGAGCCCCGGAAGCGTGAGCTCGGAGTATGA 631 Query 1941 CGCAAGCTCGTACACG-GCAGACATGAAAAAGTTCAAGAAACTGGCGTTAGAGAATAAAG 1999 |||||||| |||| | |||||||||||||| ||||||||| |||||||||||||||||| Sbjct 632 TGCAAGCTCTTACA-GTGCAGACATGAAAAAATTCAAGAAATTGGCGTTAGAGAATAAAG 690 Query 2000 AA 2001 || Sbjct 691 AA 692 Score = 331 bits (179), Expect = 1e-89 Identities = 203/215 (94%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 1457 ATTTTGGATTGGCTAAGCTATCTCAAGACAACTATACTCATGTCTCCACTCGCGTCATGG 1516 |||||||||| |||||| |||||||||||||||||||||||||||| ||||| ||||||| Sbjct 238 ATTTTGGATTAGCTAAGTTATCTCAAGACAACTATACTCATGTCTCTACTCGAGTCATGG 297 Query 1517 GAACTTTTGGATACTTAGCTCCAGAGTATGCATCAAGCGGAAAGTTATCCGACAAATCTG 1576 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 298 GAACTTTTGGATACTTAGCTCCAGAGTATGCTTCAAGTGGAAAGTTATCCGACAAATCTG 357 Query 1577 ATGTTTTCTCATTTGGAGTAATGCTTCTTGAGCTCATAACCGGAAGACCTCCTCTGGATC 1636 |||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||| Sbjct 358 ATGTTTTCTCATTTGGAGTAATGCTTCTTGAGCTCATAACCGGACGACCTCATGTGGATC 417 Query 1637 TAACTGGAGAAATGGAAGATAGCTTGGTAGATTGG 1671 ||||||||||||||||||| |||||||| || ||| Sbjct 418 TAACTGGAGAAATGGAAGACAGCTTGGTCGACTGG 452 Score = 231 bits (125), Expect = 1e-59 Identities = 174/195 (89%), Gaps = 13/195 (7%) Strand=Plus/Plus Query 984 CCAAAGCACTTTCACATACGATGAACTGTCCATTGCAACAGAAGG-TTTCGCTCAGTCAA 1042 ||||||||||||||| ||||||||| |||| |||||||||||||| |||| ||||||||| Sbjct 1 CCAAAGCACTTTCACGTACGATGAATTGTCTATTGCAACAGAAGGTTTTCACTCAGTCAA 60 Query 1043 ATTTGCTAGGACAAGGAGGATTTGGGTATGTTCATAAAGGAGTTCTGCCTAGTGGCAAAG 1102 ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| Sbjct 61 ATTTGCTAGGACAAGGACGATTTGGGTATGTTCATAAAGGAGTTTTGCCTTGTGGCAAAG 120 Query 1103 AAGTTGCAGTGAAGAGTCTTAAACTTGGAAGTGGACAAGGGGAACGCGAGTTTCAAGCAG 1162 |||||||||||||||||||||||| ||| | | |||||||||||||||||| Sbjct 121 AAGTTGCAGTGAAGAGTCTTAAAC----AAG-GT----G---AACGCGAGTTTCAAGCAG 168 Query 1163 AGGTTGATATCATTA 1177 ||||||||||||||| Sbjct 169 AGGTTGATATCATTA 183 > Ahg918637 jgi|Araly1|918637|Al_scaffold_0310_2 Length=819 Score = 335 bits (181), Expect = 1e-90 Identities = 207/220 (94%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 1457 ATTTTGGATTGGCTAAGCTATCTCAAGACAACTATACTCATGTCTCCACTCGCGTCATGG 1516 |||||||||| |||||| |||||||||||||||||||||||||||| ||||| ||||||| Sbjct 218 ATTTTGGATTAGCTAAGTTATCTCAAGACAACTATACTCATGTCTCTACTCGAGTCATGG 277 Query 1517 GAACTTTTGGATACTTAGCTCCAGAGTATGCATCAAGCGGAAAGTTATCCGACAAATCTG 1576 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 278 GAACTTTTGGATACTTAGCTCCAGAGTATGCTTCAAGTGGAAAGTTATCCGACAAATCTG 337 Query 1577 ATGTTTTCTCATTTGGAGTAATGCTTCTTGAGCTCATAACCGGAAGACCTCCTCTGGATC 1636 |||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||| Sbjct 338 ATGTTTTCTCATTTGGAGTAATGCTTCTTGAGCTCATAACCGGACGACCTCATGTGGATC 397 Query 1637 TAACTGGAGAAATGGAAGATAGCTTGGTAGATTGGGCAAG 1676 ||||||||||||||||||| |||||||| || |||| ||| Sbjct 398 TAACTGGAGAAATGGAAGACAGCTTGGTCGACTGGGTAAG 437 Score = 329 bits (178), Expect = 5e-89 Identities = 248/280 (89%), Gaps = 11/280 (4%) Strand=Plus/Plus Query 1834 ATTGTACGAGCACTAGAAGGAGATATGTCAATGGATGATCTAAGTGAGGGAACAAGACCA 1893 ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 547 ATTGTACGAGCACTAGAAGGAGATATGTCAATGGAGGATCTAAGTGAAGGAACAAGACCG 606 Query 1894 GGACAAAGCACGTACTTGAGCCCCGGGAGCGTGAGCTCAGAGTATGACGCAAGCTCGTAC 1953 ||||||||||| || ||||||||||| ||||||||||| |||||||| |||||||| ||| Sbjct 607 GGACAAAGCACCTATTTGAGCCCCGGAAGCGTGAGCTCGGAGTATGATGCAAGCTCTTAC 666 Query 1954 ACG-GCAGACATGAAAAAGTTCAAGAAACTGGCGTTAGAGAATAAAGAATATCAAAG-CA 2011 | | |||||||||||||| ||||||||| |||||||||||||||||||| | ||| || Sbjct 667 A-GTGCAGACATGAAAAAATTCAAGAAATTGGCGTTAGAGAATAAAGAA-A--AAATTCA 722 Query 2012 GTGAATAT-GGTGGAACA-AGTGAGTATGGCTTAAACCCTTCTGCTTCAAGTAGTGAAGA 2069 ||| || || | | | | ||||||||||||||| ||||||||||||||||| ||||| Sbjct 723 A-GAA-ATTGGCGTTAGAGA-TGAGTATGGCTTAAATCCTTCTGCTTCAAGTAGAGAAGA 779 Query 2070 AATGAATAGAGGCTCAATGAAACGCAATCCTCAGCTTTGA 2109 |||||||||||| |||||||||||||||||| |||||||| Sbjct 780 AATGAATAGAGGTTCAATGAAACGCAATCCTAAGCTTTGA 819 Score = 159 bits (86), Expect = 6e-38 Identities = 124/140 (89%), Gaps = 12/140 (9%) Strand=Plus/Plus Query 1038 GTCAAATTTGCTAGGACAAGGAGGATTTGGGTATGTTCATAAAGGAGTTCTGCCTAGTGG 1097 |||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||| Sbjct 3 GTCAAATTTGCTAGGACAAGGACGATTTGGGTATGTTCATAAAGGAGTTTTGCCTTGTGG 62 Query 1098 CAAAGAAGTTGCAGTGAAGAGTCTTAAACTTGGAAGTGGACAAGGGGAACGCGAGTTTCA 1157 ||||||||||||||||||||||||||||| ||| | | ||||||||||||| Sbjct 63 CAAAGAAGTTGCAGTGAAGAGTCTTAAAC----AAG-GT----G---AACGCGAGTTTCA 110 Query 1158 AGCAGAGGTTGATATCATTA 1177 |||||||||||||||||||| Sbjct 111 AGCAGAGGTTGATATCATTA 130 Score = 82.4 bits (44), Expect = 1e-14 Identities = 46/47 (98%), Gaps = 0/47 (0%) Strand=Plus/Plus Query 1787 CTGCAGCAATCAGACATTCAGCAAGAAGACGGCCTAAGATGAGCCAG 1833 |||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 467 CTGCAGCAATCAGACACTCAGCAAGAAGACGGCCTAAGATGAGCCAG 513 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 87264751295 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5