BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G35010.1
Length=2801
Score E
Sequences producing significant alignments: (Bits) Value
Ahg491156 jgi|Araly1|491156|fgenesh2_kg.7__589__AT4G35010.1 4518 0.0
Ahg480556 jgi|Araly1|480556|fgenesh2_kg.3__3257__AT2G16730.1 2305 0.0
> Ahg491156 jgi|Araly1|491156|fgenesh2_kg.7__589__AT4G35010.1
Length=2794
Score = 4518 bits (2446), Expect = 0.0
Identities = 2686/2803 (96%), Gaps = 11/2803 (0%)
Strand=Plus/Plus
Query 1 ATTTGAGCTCTCCTTGTTTTTTATTCCTCCGACAAGGACGAGGTTCCAAGAGAACTTAGC 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATTTGAGCTCTCCTTGTTTTTTATTCCTCCGACAAGGACGAGGTTCCAAGAGAACTTAGC 60
Query 61 TTCTTGTTCTACGTACGACACCAAAAATTAATTCaaaaaagaaaaaGAAGAGAGTTCAAT 120
|||||| | | | ||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct 61 TTCTTG-T-T-C-TACGACA-CAAAAATTAATTCAAAAAAGAAAAAGAAGAGGGTTCAAT 115
Query 121 GAGAAAACATTCTCTTGATCGATGGCTTTTAACAGCTGTTCTTGTCGTTCTCCTCTCGTC 180
||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct 116 GAGAAAACATTCTCTTGATCGATGGCTTTTAACGGCCGTTCTTGTGGTTCTCCTCTCGTC 175
Query 181 TTCTTCCTCCTTCGCGGCCAAGAAGGACGCCAAGAAGAAGAAGAAGAGTAATAAGGAGGT 240
|||||||||||| ||||| || ||||||| |||||||||||||||||||||||||||
Sbjct 176 TTCTTCCTCCTTTGCGGCTAAAAAGGACG---TGAAGAAGAAGAAGAGTAATAAGGAGGT 232
Query 241 GACATATGATGGAACCTCTTTGATCATCGATGGCAAAAGAGAGCTTCTTTATTCTGGCTC 300
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||
Sbjct 233 GACATATGATGGAACCTCTTTGATCATTGATGGCAAAAGAGAGCTTCTTTACTCTGGATC 292
Query 301 TATTCATTACCCGAGAAGCACTCCGGAAATGTGGCCAAGTATCATCAAGAGAGCCAAGCA 360
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 293 TATTCATTACCCTAGAAGCACTCCTGAAATGTGGCCAAGTATCATCAAGAGAGCCAAACA 352
Query 361 AGGCGGTTTGAACACGATTCAGACATACGTTTTCTGGAATGTACATGAGCCTCAACAAGG 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 353 AGGCGGTTTGAACACGATTCAGACATACGTTTTCTGGAATGTACATGAGCCTCAACAAGG 412
Query 421 AAAGTTCAACTTTTCGGGACGAGCTGATTTGGTGAAGTTCATAAAGTTGATTCAAAAGAA 480
||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||
Sbjct 413 AAAGTTCAACTTTTCTGGACGAGCTGATTTGGTGAAGTTCATAAAGTTGATTGAGAAGAA 472
Query 481 TGGAATGTATGTGACCTTAAGGCTTGGACCGTTCATCCAAGCTGAATGGACTCATGGAGG 540
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 473 TGGCATGTATGTGACCTTAAGGCTTGGACCGTTTATCCAAGCTGAATGGACTCATGGAGG 532
Query 541 ACTTCCTTATTGGCTTAGAGAAGTTCCTGGAATTTTCTTCCGTACAGACAATAAACAATT 600
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||
Sbjct 533 ACTTCCTTATTGGCTTAGAGAAGTTCCTGGAATTTTCTTCCGTACAGATAATAAACCATT 592
Query 601 CAAGGAGCATACAGAAAGGTATGTACGGATGATACTCGACAAAATGAAGGAGGAAAGATT 660
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 593 CAAGGAACATACAGAAAGGTATGTACGGATGATACTCGACAAACTGAAGGAGGAAAGATT 652
Query 661 GTTTGCGTCACAAGGAGGCCCCATTATATTAGGACAGATAGAAAACGAATATAGCGCGGT 720
|||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 653 GTTTGCGTCACAAGGAGGCCCCATTATATTAGGACAGATAGAGAACGAGTATAGCGCGGT 712
Query 721 TCAACGTGCATATAAACAAGACGGGTTAAACTACATTAAATGGGCATCTAATTTGGTGGA 780
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||
Sbjct 713 TCAACGTGCATATAAACAAGACGGGTTAAACTACATTAAGTGGGCATCTAAATTGGTTGA 772
Query 781 CTCAATGAAACTCGGGATCCCATGGGTTATGTGCAAGCAGAACGACGCTCCTGATCCTAT 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 773 CTCAATGAAACTCGGGATCCCATGGGTTATGTGCAAGCAGAACGACGCTCCTGATCCTAT 832
Query 841 GATCAATGCTTGTAATGGAAGACATTGCGGTGATACTTTCCCCGGTCCAAACAGAGAAAA 900
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 833 GATCAATGCTTGTAATGGAAGACATTGCGGTGATACTTTCCCCGGTCCAAACAAAGAAAA 892
Query 901 CAAACCATCTTTATGGACTGAGAATTGGACTACTCAGTTCCGCGTGTTTGGTGATCCGCC 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 893 CAAACCATCTTTATGGACTGAGAATTGGACTACTCAGTTCCGCGTGTTTGGTGATCCGCC 952
Query 961 AACTCAAAGATCAGTAGAAGATATCGCGTATTCAGTTGCTCGATTCTTCTCCAAGAACGG 1020
|||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 953 AACTCAGAGATCAGTAGAAGATATCGCTTATTCAGTTGCTCGATTCTTCTCCAAGAACGG 1012
Query 1021 AACCCATGTCAACTACTACATGTACCACGGAGGGACTAACTTTGGAAGAACCTCTGCACA 1080
|| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1013 AAGCCATGTGAACTACTACATGTACCACGGAGGGACTAACTTTGGAAGAACCTCTGCACA 1072
Query 1081 TTATGTGACCACTAGATACTACGATGATGCACCTCTTGATGAATATGGTTTAGAGAAAGA 1140
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1073 TTATGTAACCACTAGATACTACGATGATGCACCTCTTGATGAATATGGTTTAGAGAGAGA 1132
Query 1141 GCCTAAGTATGGTCATCTTAAGCATCTTCACAACGCTCTTAACCTCTGCAAGAAGCCACT 1200
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1133 GCCTAAGTATGGTCATCTTAAGCATCTTCACAGTGCTCTTAACCTCTGCAAGAAGCCACT 1192
Query 1201 TCTTTGGGGTCAGCCTAAAACCGAGAAACCTGGAAAAGATACAGAGATTAGATACTACGA 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1193 TCTTTGGGGTCAGCCTAAAACCGAGAAACCTGGAAAAGATACAGAGATTAGATACTACGA 1252
Query 1261 ACAACCTGGAACCAAAACTTGTGCTGCTTTCTTGGCTAACAACAATACTGAAGCTGCAGA 1320
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 1253 ACAACCTGGAACCAAAACTTGTGCCGCTTTCTTGGCTAACAACAATACCGAAGCTGCAGA 1312
Query 1321 AACCATCAAATTCAAGGGCAGAGAATACGTGATCGCGCCTCGTTCTATTAGTATTCTTCC 1380
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1313 AACTATCAAATTCAAGGGCAGAGAATACGTGATCGCGCCTCGTTCCATTAGTATTCTTCC 1372
Query 1381 CGATTGTAAAACTGTTGTTTACAACACTGCACAGATTGTTTCTCAACACACTTCAAGGAA 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1373 CGATTGTAAAACTGTTGTTTACAACACTGCACAGATTGTTTCTCAACACACTTCAAGGAA 1432
Query 1441 CTTTATGAAGTCTAAAAAGGCAAACAAGAAGTTTGATTTCAAAGTTTTCACAGAGACATT 1500
||||||||||||||||||||| ||||||||||||||||||||||| ||||| ||||||||
Sbjct 1433 CTTTATGAAGTCTAAAAAGGCGAACAAGAAGTTTGATTTCAAAGTATTCACTGAGACATT 1492
Query 1501 GCCTAGTAAACTCGAAGGTAACTCATACATACCCGTTGAGCTTTATGGTTTGACTAAAGA 1560
|||||||||||| ||||| ||||| |||||||| ||||||||||| ||||||||||||||
Sbjct 1493 GCCTAGTAAACTGGAAGGCAACTCTTACATACCTGTTGAGCTTTACGGTTTGACTAAAGA 1552
Query 1561 CAAGACAGACTATGGATGGTACACAACAAGCTTCAAGGTTCACAAGAATCACTTACCTAC 1620
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1553 CAAGACAGACTATGGATGGTACACAACAAGCTTCAAGGTTCATAAGAATCACTTACCTAC 1612
Query 1621 CAAGAAAGGAGTTAAGACTTTTGTGAGGATTGCTAGTCTTGGACACGCGTTGCACGCTTG 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1613 CAAGAAAGGAGTTAAGACTTTTGTGAGGATTGCTAGTCTTGGACACGCGTTGCACATTTG 1672
Query 1681 GCTTAACGGAGAATACCTTGGAAGTGGACATGGAAGCCACGAAGAGAAGAGTTTTGTTTT 1740
||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1673 GCTTAACGGCGAATACCTTGGAAGTGGACATGGAAGCCATGAAGAGAAGAGTTTTGTTTT 1732
Query 1741 CCAAAAACAGGTTACACTAAAAGCAGGAGAGAATCATCTTGTAATGCTTGGTGTTCTCAC 1800
||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct 1733 CCAGAAACAGGTTACACTTAAAGCAGGAGAGAATCATCTTATAATGCTTGGTGTTCTCAC 1792
Query 1801 AGGATTCCCAGACAGTGGATCTTACATGGAGCATAGATACACCGGTCCTCGTGGTATTTC 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1793 AGGATTCCCAGACAGTGGATCTTACATGGAGCATAGATACACCGGTCCTCGTGGTGTTTC 1852
Query 1861 CATCTTAGGATTGACTTCTGGAACACTTGATCTCACTGAGAGCAGCAAATGGGGAAACAA 1920
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1853 CATCCTAGGATTGACTTCTGGAACACTTGATCTCACTGAGAGCAGCAAATGGGGAAACAA 1912
Query 1921 GATCGGTATGGAAGGTGAAAAACTTGGAATCCACACTGAGGAAGGTTTAAAGAAGGTCGA 1980
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1913 GATCGGTATGGAAGGTGAAAAACTCGGAATCCACACTGAGGAAGGTTTAAAGAAGGTTGA 1972
Query 1981 ATGGAAAAAATTCACCGGAAAAGCACCAGGACTTACATGGTACCAGACATACTTTGATGC 2040
||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct 1973 ATGGAAAAAGTTCACCGGAAAAGCACCAGGACTTACATGGTATCAGGCATACTTTGATGC 2032
Query 2041 ACCAGAGAGCGTAAGCGCAGCAACGATTCGCATGCATGGAATGGGAAAAGGGTTGATTTG 2100
|||||||||| ||| |||||| ||||||||||| | |||||||||||||||||||||||
Sbjct 2033 ACCAGAGAGCCTAAACGCAGCGGCGATTCGCATGAACGGAATGGGAAAAGGGTTGATTTG 2092
Query 2101 GGTGAACGGAGAAGGCGTTGGAAGATATTGGCAATCGTTCTTGTCTCCATTAGGTCAACC 2160
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2093 GGTGAACGGAGAAGGTGTTGGAAGATATTGGCAATCGTTCTTATCTCCATTAGGTCAACC 2152
Query 2161 TACACAAATAGAGTATCACATCCCTAGATCTTTCTTAAAGCCCAAGAAGAACCTTCTTGT 2220
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2153 TACACAAATAGAGTATCACATCCCTAGATCTTTCTTGAAGCCCAAGAAGAACCTTCTTGT 2212
Query 2221 TATCTTTGAGGAAGAGCCTAATGTGAAGCCTGAGCTTATGGACTTTGCCATCGTTAACAG 2280
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2213 TATCTTTGAGGAAGAGCCTAATGTGAAGCCTGAGCTTATGGACTTTGTCATCGTTAACAG 2272
Query 2281 AGACACTGTTTGTTCTTACGTTGGAGAAAACTACACTCCAAGTGTTAGACACTGGACTAG 2340
|||||||||||||||||| || || |||||||||||||||||||||||||| ||||||||
Sbjct 2273 AGACACTGTTTGTTCTTATGTCGGTGAAAACTACACTCCAAGTGTTAGACATTGGACTAG 2332
Query 2341 GAAGAAAGATCAAGTTCAAGCCATCACAGATAACGTGAGTCTCACGGCTACTCTTAAATG 2400
|||| ||||||| || ||||||||||||||||| |||||||| |||||||| ||||||||
Sbjct 2333 GAAGCAAGATCAGGTCCAAGCCATCACAGATAATGTGAGTCTTACGGCTACACTTAAATG 2392
Query 2401 CTCAGGCACTAAGAAGATCGCAGCAGTTGAGTTCGCTAGCTTCGGAAACCCTATTGGTGT 2460
||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 2393 CTCAGGCACTAAGAAAATCGCAGCCGTTGAGTTCGCTAGCTTCGGAAACCCTATCGGTGT 2452
Query 2461 TTGTGGAAACTTCACACTTGGTACTTGTAATGCTCCTGTTTCAAAGCAAGTCATCGAGAA 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2453 TTGTGGAAACTTCACACTTGGTACTTGTAATGCTCCTGTTTCAAAGCAAGTCATCGAGAA 2512
Query 2521 GCACTGTTTGGGGAAAGCTGAATGTGTGATTCCGGTGAACAAGAGCACGTTTCAACAAGA 2580
|||||||||||||||||| || ||||||||||| ||||||||||||||||| ||||||||
Sbjct 2513 GCACTGTTTGGGGAAAGCAGAGTGTGTGATTCCAGTGAACAAGAGCACGTTCCAACAAGA 2572
Query 2581 CAAGAAGGATTCATGTAAGAACGTTGTGAAGATGCTTGCCGTGCAAGTCAAGTGTGGTCG 2640
|||||||||||| ||||||||||||| ||||| || ||||| |||||||||||||| ||
Sbjct 2573 CAAGAAGGATTCGTGTAAGAACGTTGCGAAGACACTCGCCGTACAAGTCAAGTGTGGCCG 2632
Query 2641 TGGGAAGAAGAACTGAAGAGTGTATATCATCACATTA-CATATGGTTCA-TGTATTGTGT 2698
||| |||||||||||| |||| ||||||||||||||| ||||||||||| ||||| ||||
Sbjct 2633 TGGCAAGAAGAACTGA-GAGTATATATCATCACATTATCATATGGTTCAATGTATCGTGT 2691
Query 2699 TTAGTAGACCAATTTCAAAGTGTTGTGACATCGATTTTTGTCGTTCTGTTTGTATTTGAT 2758
||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct 2692 TTAGTAGACCAATTTCAAAATGTTGTGGCATCGATTTTTGTCGTTCTGTTTGTATTTGAT 2751
Query 2759 TTCTTCAATTTAACTCTAATACACGAGTAATATATTCGAATAT 2801
|||||||||||||| ||||||||||||||| |||||||||||
Sbjct 2752 TTCTTCAATTTAACGCTAATACACGAGTAAGGTATTCGAATAT 2794
> Ahg480556 jgi|Araly1|480556|fgenesh2_kg.3__3257__AT2G16730.1
Length=2715
Score = 2305 bits (1248), Expect = 0.0
Identities = 2165/2605 (83%), Gaps = 74/2605 (3%)
Strand=Plus/Plus
Query 95 aaaaaagaaaaaGAAGAGAGTTC-AATGAGAAAACATT-CTCTTGATC---GATGGCTTT 149
||||||||| ||||||| || || |||||||| ||||| ||| ||||| ||||||||
Sbjct 9 AAAAAAGAAGAAGAAGATAG-TCAAATGAGAATACATTCCTC-TGATCATTCATGGCTTT 66
Query 150 TAACAGCTGTTCTTGTCG-TTCTCCTCTCGTCTTCTTCCTCCTTCGCGGCCAAG-AAGGA 207
|| ||| |||| || | |||||||||| |||| | || | | | |||| | ||
Sbjct 67 TATTAGCCATTCTGGT-GATTCTCCTCTC--CTTC-T-CTGGAGCTCTGTCAAGCGATGA 121
Query 208 CGCCA-AGAAGAAGAAG-AA---G-AG-TAATAAG---GAGGTGACATATGATGGAACCT 257
| | ||||||||| | || | | ||| ||| || || || ||||||||||| |
Sbjct 122 C-AAAGAGAAGAAGACGAAATCGGTCGATAAAAAGAAAGAAGTAACTTATGATGGAACGT 180
Query 258 CTTTGATCATCGATGGCAAA-AGAGAGCTTCTTTATTCTGGCTCTATTCATTACCCGAGA 316
||||||||||| |||| ||| ||||| || ||||| |||||||| || |||||||| |
Sbjct 181 CTTTGATCATCAATGG-AAATAGAGAACTCCTTTACTCTGGCTCCATACATTACCCTCGT 239
Query 317 AGCACTCCGGAAATGTGGCCAAGTATCATCAAGAGAGCCAAGCAAGGCGGTTTGAACACG 376
|||||||| ||||||||||||| |||||||||||||| || ||||||||||||||||||
Sbjct 240 AGCACTCCTGAAATGTGGCCAAACATCATCAAGAGAGCGAAACAAGGCGGTTTGAACACG 299
Query 377 ATTCAGACATACGTTTTCTGGAATGTACATGAGCCTCAACAAGGAAAGTTCAACTTTTCG 436
||||||||||| ||||| ||||| || ||||||||| | || ||||||||||| ||||||
Sbjct 300 ATTCAGACATATGTTTTTTGGAACGTTCATGAGCCTGAGCAGGGAAAGTTCAATTTTTCG 359
Query 437 GG-ACGAGCTGATTTGGTGAAGTTCATAAAGTTGATTCAAAAGAATGGAATGTATGTGAC 495
|| | |||| || ||||||||||||||||| | ||| | |||||||| |||||||||||
Sbjct 360 GGTA-GAGCCGACTTGGTGAAGTTCATAAAACTAATTGAGAAGAATGGTATGTATGTGAC 418
Query 496 CTTAAGGCTTGGACCGTTCATCCAAGCTGAATGGACTCATGGAGGACTTCCTTATTGGCT 555
||| ||||||||||| || || ||||||||||||||||||||||||||||||||||||||
Sbjct 419 CTTGAGGCTTGGACCTTTTATTCAAGCTGAATGGACTCATGGAGGACTTCCTTATTGGCT 478
Query 556 TAGAGAAGTTCCTGGAATTTTCTTCCGTACAGACAATAAACAATTCAAGGAGCATACAGA 615
||||||||||| || || ||||||||||| || |||| || |||||||| ||||||||
Sbjct 479 AAGAGAAGTTCCCGGGATCTTCTTCCGTACCGATAATACACCTTTCAAGGAACATACAGA 538
Query 616 AAGGTATGT-ACGGATGATACTCGACAAAATGAAGGAGGA-AAGATTGTTTGCGTCACAA 673
|||||||| | || ||||||| ||||| ||||||||||| ||| || ||||| || |||
Sbjct 539 GAGGTATGTTAAGG-TGATACTTGACAAGATGAAGGAGGAGAAGCTT-TTTGCTTCGCAA 596
Query 674 GGAGGCCCCATTATATTAGGACAGATAGAAAACGAATATAGCGCGGTTCAACGTGCATAT 733
||||||||||||||||||||||||||||| || || ||||| ||||| ||||| ||||||
Sbjct 597 GGAGGCCCCATTATATTAGGACAGATAGAGAATGAGTATAGTGCGGTCCAACGAGCATAT 656
Query 734 AAACAAGACGGGTTAAACTACATTAAATGGGCATCTAATTTGGTGGACTCAATGAAACTC 793
||| |||| || |||||||||||||| ||||||||||| ||||| |||| ||| | |
Sbjct 657 AAAGAAGATGGATTAAACTACATTAAGTGGGCATCTAAATTGGTACACTCGATGGATTTG 716
Query 794 GGGATCCCATGGGTTATGTGCAAGCAGAACGACGCTCCTGATCCTATGATCAATGCTTGT 853
|||||||||||||||||||| ||||| || || ||||||||||||||||| || ||||||
Sbjct 717 GGGATCCCATGGGTTATGTGTAAGCAAAATGATGCTCCTGATCCTATGATTAACGCTTGT 776
Query 854 AATGGAAGACATTGCGGTGATACTTTCCCCGGTCCAAACAGAGAAAACAAACCATCTTTA 913
|| |||||||||||||||||||| ||||| |||||||||| ||||||||| || ||||||
Sbjct 777 AACGGAAGACATTGCGGTGATACATTCCCTGGTCCAAACAAAGAAAACAAGCCGTCTTTA 836
Query 914 TGGACTGAGAATTGGACTACTCAGTTCCGCGTGTT-TGGTGATCCGCCAACTCAAAGATC 972
||||| |||||||||||||| |||||||| || || ||| ||||| ||| | ||||||||
Sbjct 837 TGGACAGAGAATTGGACTACGCAGTTCCGAGT-TTATGGCGATCCCCCAGCACAAAGATC 895
Query 973 AGTAGAAGATATCGCGTATTCAGTTGCTCGATTCTTCTCCAAGAACGGAACCCATGTCAA 1032
|||||||||||||| ||||| ||||| || || ||||||||||| ||||||||||| ||
Sbjct 896 TGTAGAAGATATCGCCTATTCTGTTGCCCGGTTTTTCTCCAAGAATGGAACCCATGTTAA 955
Query 1033 CTACTACATGTACCACGGAGGGACTAACTTTGGAAGAACCTCTGCACATTATGTGACCAC 1092
|||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 956 CTACTATATGTATCATGGAGGTACTAACTTTGGAAGAACCTCTGCACATTATGTGACCAC 1015
Query 1093 TAGATACTACGATGATGCACCTCTTGATGAATATGGTTTAGAGAAAG--AGCCTAAGTAT 1150
| | ||||||||||||||||||||||||||||| || || | ||||| ||||||||||
Sbjct 1016 TCGTTACTACGATGATGCACCTCTTGATGAATACGGATT-G-GAAAGGGAGCCTAAGTAC 1073
Query 1151 GGTCATCTTAAGCATCTTCACAACGCTCTTAACCTCTGCAAGAAGCCACTTCTTTGGGGT 1210
|||||||| ||||||||||||||||| |||||| | ||||||||| ||||||| |||||
Sbjct 1074 GGTCATCTAAAGCATCTTCACAACGCACTTAACTTGTGCAAGAAGGCACTTCTCTGGGGC 1133
Query 1211 CAGCCTAAAACCGAGAAACCTGGAAAAGATACAGAGATTAGATACTACGAACAACCTGGA 1270
||||||| | |||||| ||| | || || ||||||||| |||||||||| || ||||||
Sbjct 1134 CAGCCTAGAGTCGAGAAGCCTAGCAATGAAACAGAGATTCGATACTACGAGCAGCCTGGA 1193
Query 1271 ACCAAAACTTGTGCTGC-TTTCTTGGCTAACAACAATACTGAAGCTGCAGAAACCATCAA 1329
|| ||| |||||| || ||| |||||||||||||| || ||| ||||||||| |||||
Sbjct 1194 ACGAAAGTTTGTGCGGCGTTT-TTGGCTAACAACAACACAGAATCTGCAGAAAAAATCAA 1252
Query 1330 ATTCAAGGGCAGAG-AATACGTGAT-CGCGCCTCGTTCTATTAGTATTCTTCCC-GATTG 1386
||||||||||| || |||| | || | ||| ||| || || |||||||| ||| || ||
Sbjct 1253 ATTCAAGGGCA-AGGAATATATTATTC-CGCATCGCTCCATCAGTATTCT-CCCTGACTG 1309
Query 1387 TAAAACTGTTGTTTACAACACTGCACAGATTGTTTCTCAACACACTTCAAGGAACTTTAT 1446
||||| |||||||| ||||| | |||| | ||||| || |||||||| ||||| ||
Sbjct 1310 CAAAACCGTTGTTTATAACACCGGGGAGATCATCTCTCATCATACTTCAAGAAACTTCAT 1369
Query 1447 GAAGTCTAAAAAGGCAAACAAGAAGTTTGATTTCAAAGTTTTCACAGAGACATTGCCTAG 1506
|||||| ||||| || || ||||| |||||||||||||| ||||| |||||| |||| ||
Sbjct 1370 GAAGTCGAAAAAAGCGAATAAGAACTTTGATTTCAAAGTCTTCACCGAGACAGTGCCAAG 1429
Query 1507 TAA-ACTCGAAGG-TAACTCATACATACCCGTTGAGCTTTATGGTTTGACTAAAGACAAG 1564
||| | || |||| | |||| || ||||||||||| || || || ||||| |||||| ||
Sbjct 1430 TAAGA-TC-AAGGGTGACTCTTATATACCCGTTGAACTCTACGGCTTGACCAAAGACGAG 1487
Query 1565 ACAGACTATGGATGGTACACAACAAGCTTCAAGGTTCACAAGAATCACTTAC-CTACCAA 1623
|| || || ||||||||||| |||||||| || | | | ||| || | | ||| ||
Sbjct 1488 ACTGATTACGGATGGTACACCACAAGCTTTAAAATAGATGACAATGACCT-CTCTAAGAA 1546
Query 1624 GAAAGGA-GTTAAGACTT-TTGTGAGGATTGCTAGTCTTGGACACGCGTTGCACGCT-TG 1680
||||||| || ||| || || ||||||||||||||||||| |||||||| || | | ||
Sbjct 1547 GAAAGGAAGT-AAGCCTACTT-TGAGGATTGCTAGTCTTGGCCACGCGTTACATG-TGTG 1603
Query 1681 GCTTAACGGAGAATACCTTGGAAGTGGACATGGAAGCCACGAAGAGAAGAGTTTTGTTTT 1740
||| || |||||||||||||||| |||||||| ||||| |||||||||||||| |||||
Sbjct 1604 GCTAAATGGAGAATACCTTGGAAACGGACATGGTAGCCATGAAGAGAAGAGTTTCGTTTT 1663
Query 1741 CCAAAAAC-AGGTTACACTAAAAGCAGGAGAGAATCATCTTGTAATGCTTGGTGTTCTCA 1799
||||||| | || | ||||||| ||||||||| || || ||||| || ||| | |
Sbjct 1664 TCAAAAACCAATTT-CTCTAAAAGAAGGAGAGAACCACCTAACCATGCTAGGCGTTTTGA 1722
Query 1800 CAGGATTCCCAGACAGTGGATCTTACATGGAGCATAGATACACCGGTCCTCGTGGTATTT 1859
| ||||| || || ||||||||||| |||||||||||||| || ||||| ||| || |||
Sbjct 1723 CGGGATTTCCGGATAGTGGATCTTATATGGAGCATAGATATACAGGTCCACGTAGTGTTT 1782
Query 1860 CCATCTTAGGATTGA-CTTCTGGAACACTTGATCTCACTGA-GAGCAGCAAATGGGGAAA 1917
|||||||||| ||| || ||||||||||||||||||| || || | ||||||||||||
Sbjct 1783 CCATCTTAGGCTTGGGCT-CTGGAACACTTGATCTCACAGAAGAAAA-CAAATGGGGAAA 1840
Query 1918 CAAGATCGGTATGGAAGGTGAAAAACTTGGAATCCACACTGAGGAAGGTTTAAAGAAGGT 1977
|||| | || |||||||| ||||| ||||| |||||| | |||||||| || ||||||||
Sbjct 1841 CAAGGTGGGAATGGAAGGCGAAAAGCTTGGTATCCACGCCGAGGAAGGATTGAAGAAGGT 1900
Query 1978 CGAATGGAAAAAATTCACCGGAAAAGCACCAGGACTTACATGGTACCAGACATACTTTGA 2037
||||| | ||||| | ||||||| ||| || ||||||||||||||||||||||| ||
Sbjct 1901 TAAATGGCAGAAATTTTCAGGAAAAGAACCGGGGCTTACATGGTACCAGACATACTTCGA 1960
Query 2038 TGCACCAGAGAGCGTAAGCGCAGCAACGATTCGCATGCATGGAATGGGAAAAGGGTTGAT 2097
||||||||||||| ||| |||||| | ||| | ||| |||||||||| ||||| |||||
Sbjct 1961 TGCACCAGAGAGCCAAAGTGCAGCAGCAATTAGGATGAATGGAATGGGGAAAGGTTTGAT 2020
Query 2098 TTGGGTGAACGGAGAAGGCGTTGGAAGATATTGGCAA-TCGTTCTTGTCTCCATTAGGTC 2156
|||||||||||||||||| ||||| |||||||| | ||||| || || || ||||| |
Sbjct 2021 TTGGGTGAACGGAGAAGGTGTTGGTCGATATTGG-ATGTCGTTTTTATCGCCTTTAGGAC 2079
Query 2157 AACCTACACAAATAGAGTATCACATCCCTAGATCTTTCTTAAAGCCCAAGAAGAACCTTC 2216
| ||||| ||||| ||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct 2080 AGCCTACGCAAATCGAGTATCACATCCCTAGGTCTTTCTTGAAGCCCAAGAAAAACCTT- 2138
Query 2217 TTG-TTATCTTTGAGGAAGAGCCTAATGTGAAGCCTGAGCTTATGGACTTTGCCATCGTT 2275
||| |||| |||||||||||||| ||||||||||| |||||||| ||||||| ||| |
Sbjct 2139 TTGGTTATATTTGAGGAAGAGCCAAATGTGAAGCCAGAGCTTATCGACTTTGTCATTATC 2198
Query 2276 AACAGAGACACTGTTTGTTCTTACGTTGGAGAAAACTACACTCCAAGTGTTAGACACTGG 2335
|| |||||||| || |||||| || ||||||||||||||||||| ||||| ||||||||
Sbjct 2199 AATAGAGACACGGTGTGTTCTCACATTGGAGAAAACTACACTCCTAGTGTCCGACACTGG 2258
Query 2336 ACTAGGAAGAAAGATCAAGTTCAAGCCATCACAGATAACGTG-AGTCTCACGGCTACTCT 2394
|| |||||||| || |||||||| |||||||| ||| ||||| | ||||||||||| |||
Sbjct 2259 ACCAGGAAGAATGACCAAGTTCAGGCCATCACTGATGACGTGCA-TCTCACGGCTAGTCT 2317
Query 2395 TAAATGCTCAGGCACTAAGAAGATCGCAGCAGTTGAGTTCGCTAGCTTCGGAAACCCTAT 2454
||||| || ||||| ||||||||| | | ||| || ||||||||||| ||||||||||
Sbjct 2318 CAAATGTTCCGGCACAAAGAAGATCTCCGAAGTGGAATTCGCTAGCTTTGGAAACCCTAA 2377
Query 2455 TGGTGT-TTGTGGAAACTTCACACTTGGTACTTGTAATGCTCCTGTTTCAAAGCAAGTCA 2513
||| | ||||||||||||||| ||||| ||||| ||||||||||| || ||| |||||
Sbjct 2378 TGG-GACTTGTGGAAACTTCACTCTTGGAACTTGCAATGCTCCTGTCTCTAAGAAAGTCG 2436
Query 2514 TCGAGAAGCACTGTTTGGGGAAAGCTGAATGTGTGATTCCGGTGAACAAGAGCACGTTTC 2573
| || ||| |||||||||| ||||| || ||||||||||||||||||||||| ||||| |
Sbjct 2437 TTGAAAAGTACTGTTTGGGTAAAGCAGAGTGTGTGATTCCGGTGAACAAGAGTACGTTCC 2496
Query 2574 AACAAGACAAGAAGGATTCATGTAAGAACGTTGTGAAGATGCTTGCCGTGCAAGTCAAGT 2633
| |||||||| |||||||||||| || || | ||||| |||||| || ||||||||||
Sbjct 2497 AGCAAGACAAAAAGGATTCATGTCCCAAAGTCGAGAAGAAGCTTGCTGTACAAGTCAAGT 2556
Query 2634 GTGGTCGTGGGAAGAAGAACTGAAG 2658
||||||||| |||||||||| |||
Sbjct 2557 GTGGTCGTGACAAGAAGAACT-AAG 2580
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 105700429875
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5