BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G35500.2 Length=1638 Score E Sequences producing significant alignments: (Bits) Value Ahg491097 jgi|Araly1|491097|fgenesh2_kg.7__530__AT4G35500.1 2313 0.0 Ahg480640 jgi|Araly1|480640|fgenesh2_kg.3__3341__AT2G17530.1 1247 0.0 Ahg343373 jgi|Araly1|343373|fgenesh1_pg.C_scaffold_3003136 1245 0.0 > Ahg491097 jgi|Araly1|491097|fgenesh2_kg.7__530__AT4G35500.1 Length=1627 Score = 2313 bits (1252), Expect = 0.0 Identities = 1488/1597 (93%), Gaps = 35/1597 (2%) Strand=Plus/Plus Query 33 TCTTTGTCTTTGTTTGGGTCCTTGCCAAGATCCAATTTTTACGATCAAAATCGACCC--- 89 ||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 48 TCTTTCTCTCTCTTTGGGTCCTTGCCAAGATCCAATTTTTACGATCAAAATCGACCCGGT 107 Query 90 GGTGGAATTCAGACACGTCTTTTAGATAGAGATATGTCTTGTTCATCTTCTTCCGGATCA 149 ||||| ||||||||||||| |||||||||||||||||| ||||||||||||||||||||| Sbjct 108 GGTGGTATTCAGACACGTC-TTTAGATAGAGATATGTCGTGTTCATCTTCTTCCGGATCA 166 Query 150 GAAGGAGAAGAAGAGGGTTTCGATGCTTACCGTAAAGGTGGTTATCACGCCGTCAGGATC 209 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 167 GAAGGAGAAGAAGAAGGTTTCGATGCTTACCGTAAAGGTGGTTATCACGCCGTCAGGATC 226 Query 210 GGCGATCCTTTTTCCGGTGGTCGTTACATCGCTCAGAGAAAGCTTGGTTGGGGTCAATTC 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 227 GGCGATCCTTTTTCCGGTGGTCGTTACATCGCTCAGAGAAAGCTTGGTTGGGGTCAATTC 286 Query 270 TCCACCGTTTGGCTTGCCTACGATACGCTCACCTCTAA-TGTTTTGCTTTGTATGTTTTT 328 |||||||||||||||||||||||||| | ||||||||| | | |||||||| | | || Sbjct 287 TCCACCGTTTGGCTTGCCTACGATACTCGCACCTCTAATTATGTTGCTTTG-AAG-ATTC 344 Query 329 ATGTCTCTTTGCACAACAATTTGCTCAAGCTGCACTTCACGAAATCGAATTTCTTTCAGC 388 | | |||||||| ||||||||||||||||||||||||||||| || |||||||| Sbjct 345 A-G-AAGAGCGCACAACAGTTTGCTCAAGCTGCACTTCACGAAATCGAGTTCCTTTCAGC 402 Query 389 TGCTGCTGATGGGGATCTCGACAAGACGAAATGTGTTGTTCGTCTTATTGACCATTTCAA 448 |||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||| Sbjct 403 TGCTGCTGATGGAGATCTCGCCAATACGAAATGTGTTGTTCGTCTTATTGACCATTTCAA 462 Query 449 GCATAGTGGTCCAAATGGGCAGCATTTATGCATGGTGCTTGAGTTTCTCGGCGATAGCTT 508 ||||| |||||||||||||||||||||||| ||||||||||||||||| || |||||||| Sbjct 463 GCATACTGGTCCAAATGGGCAGCATTTATGTATGGTGCTTGAGTTTCTTGGTGATAGCTT 522 Query 509 GCTCCGTTTAATCAGATACAACCAGTACAAAGGTCTGAAACTGAATAAAGTCCGGGAGAT 568 |||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||| Sbjct 523 GCTCCGTTTAATCAGATACAACCATTACAAAGGTCTGAAAATAAATAAAGTCCGGGAGAT 582 Query 569 TTGCAGATGTATACTGACTGGTTTAGATTATTTGCACCGTGAGCTCGGTATGATTCACTC 628 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 583 TTGCAGATGTATATTGACTGGTTTAGATTATTTGCACCGTGAGCTCGGTATGATTCACTC 642 Query 629 CGACTTAAAACCTGAAAACATTCTTCTTTGTTCCACCATTGACCCTGCCAAAGATCCCGT 688 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 643 CGACTTAAAACCTGAAAACATTCTTCTTTGTTCCACCATTGACCCTGCCAAAGATCCCGT 702 Query 689 TAGATCTGGACTCACCCCACTATTAGAAAAACCAGAGGGAAACGCAAACGGTGGCGCATC 748 |||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | ||| Sbjct 703 TAGATCTGGACTAACCCCACTATTAGAAAAGCCAGAGGGAAACGCAAACGGTGGTGGATC 762 Query 749 AACAATGAATCTGATTGAGAAGAAACTAAAGAGAAGAGCGAAAAGAGCGGTTGCTAAAAT 808 || |||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 763 CACTATGAATCTGATTGAGAAGAAGCTAAAGAGAAGAGCAAAAAGAGCGGTTGCTAAAAT 822 Query 809 ATCAGAAAGAAGAGTCTCAATGGT---T---ACAGGTGAAGAAGCATCATCGAAAACGGA 862 |||||||||||||||||||||||| | ||||||||||||||||||||||| || || Sbjct 823 ATCAGAAAGAAGAGTCTCAATGGTGGGTGCTACAGGTGAAGAAGCATCATCGAAGACAGA 882 Query 863 AAAAAGTCTAGATGGGATTGATATGAGATGCAAAGTGGTTGACTTTGGTAACGCTTGTTG 922 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 883 AAGAAGTCTTGATGGGATTGATATGAGATGCAAAGTGGTTGACTTTGGTAACGCTTGTTG 942 Query 923 GGCTGATAAACAGTTTGCTGAAGAGATACAAACAAGACAGTATCGAGCTCCTGAAGTAAT 982 |||||||||||||||||| |||||||||||||| ||||||||| |||||||||||||||| Sbjct 943 GGCTGATAAACAGTTTGCGGAAGAGATACAAACGAGACAGTATAGAGCTCCTGAAGTAAT 1002 Query 983 ACTAAAGTCAGGATACTCTTTCTCTGTTGATATGTGGTCTTTTGGTTGTACGGCTTTCGA 1042 ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1003 ACTTAAGTCAGGATACTCTTTCTCTGTTGATGTGTGGTCTTTTGGTTGTACGGCTTTCGA 1062 Query 1043 GCTTGTCACAGGAGATATGCTATTTGCACCTAAAGATGGAAATGGTTATGGGGAAGACGA 1102 ||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| Sbjct 1063 GCTTGTCACAGGAGATATGCTATTTGCTCCTAAAGATGGAAATGGTTATGGAGAAGACGA 1122 Query 1103 GGATCACCTTGCTCTTATGATGGAACTCCTAGGAAAGATGCCTCGAAAGATTGCCATTGG 1162 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1123 GGATCACCTTGCTCTTATGATGGAACTCCTAGGAAAGATGCCTCGAAAGATTGCGATTGG 1182 Query 1163 AGGGGCGAAATCGAAAGACTACTTTGACAGACACGGGGACTTAAAGAGAATCCGACGGTT 1222 |||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 1183 AGGGGCGAAATCCAAAGACTACTTTGACAGACACGGGGATTTAAAGAGAATCCGGCGGTT 1242 Query 1223 GAAATATTGGCCACTTGATCGCTTGCTGATTGATAAATATAAGCTTCCGGAAGCAGAAGC 1282 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1243 GAAGTATTGGCCACTTGATCGCTTGCTGATTGATAAATATAAGCTTCCGGAAGCAGAAGC 1302 Query 1283 AAAGGAGTTTGCTGAGTTTCTGACTCCGATTCTTGAGTTTGCGCCGGAGAAACGACCAAC 1342 |||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1303 AAAGGATTTTGCCGAGTTTCTGACTCCGATTCTTGAGTTTGCGCCAGAGAAACGACCAAC 1362 Query 1343 TGCTCAACAGTGCTTGGATCATCCATGGATGAATGTAACAACACAGAACGATGCAGAAAA 1402 |||||||||||||||||| ||||||||||||||||||||||||||| || ||||||| || Sbjct 1363 TGCTCAACAGTGCTTGGAACATCCATGGATGAATGTAACAACACAGGACAATGCAGATAA 1422 Query 1403 TGTAGATGACCAAATGAACAACTTGCATATCAAAGGGTGAGAGAAACTCAAACTTCTTGt 1462 |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 1423 TGTAGATGCCCAAATGAACAACTTGCAGATCAAAGGGTGAGAGAAACTCAAACTTCTTCT 1482 Query 1463 tttttttgtggtttcattcctttgttcgttttcttttaatataactttcttcttctcttt 1522 || || || ||||||||||||| |||||||||||||||||||||||||||| ||| Sbjct 1483 TT-----GT--TT-CATTCCTTTGTTCATTTTCTTTTAATATAACTTTCTTCTTCTTTTT 1534 Query 1523 atatgtttttt--gttttgt-----ataatt-tctcttttttttttGGGGGGACCTATGA 1574 |||| |||||| ||||||| |||||| | ||||| ||||||| | |||||||| Sbjct 1535 ATATCTTTTTTTTGTTTTGTTTTGTATAATTGT-TCTTTACTTTTTGGAG--ACCTATGA 1591 Query 1575 TATATTGATTTAACCATCGAGTTCATTTGTTGCTTAT 1611 |||||||||| ||||||||| |||||||||||||||| Sbjct 1592 TATATTGATT-AACCATCGATTTCATTTGTTGCTTAT 1627 > Ahg480640 jgi|Araly1|480640|fgenesh2_kg.3__3341__AT2G17530.1 Length=1912 Score = 1247 bits (675), Expect = 0.0 Identities = 1137/1353 (84%), Gaps = 60/1353 (4%) Strand=Plus/Plus Query 113 AGATAGAGATATGTCTTGTTCATCTTCTTCCGGATCAGAAGGAGAAGAAGAGGGTTTCGA 172 ||| ||||||||||| |||||||| || || |||||||| | ||| || ||||||||||| Sbjct 131 AGACAGAGATATGTCGTGTTCATCCTCATCTGGATCAGATGAAGACGATGAGGGTTTCGA 190 Query 173 TGCTTACCGTAAAGGTGGTTATCACGCCGTCAGGATCGGCGATCC-TTTTTCCGGTGGTC 231 |||||||||||||||||| ||||||||||| || ||||| || || ||| ||||||| | Sbjct 191 TGCTTACCGTAAAGGTGGATATCACGCCGTTAGAATCGGAGA-CCAGTTTGCCGGTGGCC 249 Query 232 GTTACATCGCTCAGAGAAAGCTTGGTTGGGGTCAATTCTCCACCGTTTGGCTTGCCTACG 291 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | Sbjct 250 GTTACATTGCTCAGAGAAAGCTTGGTTGGGGCCAATTCTCCACCGTTTGGCTTGCCTATG 309 Query 292 ATACGCTCACCTCTAA-TGTTTTGCTTTGTATG-TTTTTATG-TCTCTTTGCACAACAAT 348 |||| | ||||||||| | | |||||||| | | || | | | |||| ||||| Sbjct 310 ATACTCGCACCTCTAATTATGTTGCTTTG-AAGATTCAGAAGAGCGCTTT-----ACAAT 363 Query 349 TTGCTCAAGCTGCACTTCACGAAATCGAATTTCTTTC-AGCTGCTGCTGATGGGGAT-CT 406 ||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| || Sbjct 364 TTGCTCAAGCTGCACTTCACGAAATCGAACTTC-TTCAAGCTGCTGCTGATGGGGATCCT 422 Query 407 CGACAAGACGAAATGTGTTGTTCGTCTTATTGACCATTTCAAGCATAG-TGGTCCAAATG 465 || || || ||||||||||||||||||||||| | |||||||| | ||||| |||| Sbjct 423 GGA-AATACCAAATGTGTTGTTCGTCTTATTGATGACTTCAAGCA-CGCAGGTCCCAATG 480 Query 466 GGCAGCATTTATGCATGGTGCTTGAGTTTCTCGGCGATAGCTTGCTCCGTTTAATCAGAT 525 ||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||| || Sbjct 481 GGCAGCATTTATGCATGGTGCTTGAGTTTCTTGGCGATAGCTTGCTGCGTTTGATCAAAT 540 Query 526 ACAACCAG-TACAAAGGTCTGAAACTGAATAAAGTCCGGGAGATTTGCAGATGTATACTG 584 |||||| | || ||||| || | ||| |||||| |||||||| |||| |||||||||| Sbjct 541 ACAACC-GTTATAAAGGGATGGAGTTGAGTAAAGTGCGGGAGATATGCAAATGTATACTG 599 Query 585 ACTGGTTTAGATTATTTGCACCGTGAGCTCGGTATGATTCACTCCGACTTAAAACCTGAA 644 |||||| ||||||||||||||||||| || |||||||||||||||||||||||||| ||| Sbjct 600 ACTGGTCTAGATTATTTGCACCGTGAACTTGGTATGATTCACTCCGACTTAAAACCCGAA 659 Query 645 AACATTCTTCTTTGTTCCACCATTGACCCTGCCAAAGATCCCGTTAGATCTGGACTCACC 704 ||||||||||||||||||||||||||||||||||| |||||| | ||||| ||||| || Sbjct 660 AACATTCTTCTTTGTTCCACCATTGACCCTGCCAAGGATCCCATCAGATCCGGACTAACA 719 Query 705 CCACTATTAGAAAAACCAGAGGGAAACGCAAA-CGGTGGCGCATCAACAATGAATCTGAT 763 ||| || ||||||| || ||||| ||| |||| |||| | |||||||||||||||||| Sbjct 720 CCAATACTAGAAAAGCCTGAGGGTAAC-CAAAACGGTA-C--ATCAACAATGAATCTGAT 775 Query 764 TGAGAAGAAACTAAAGAGAAGAGCGAAAAGAG-CGGTTGCTAAAATATCAGAAAGAAGAG 822 ||||||||| | ||||| |||||||||| || ||| |||||||||||||| |||||||| Sbjct 776 TGAGAAGAAGTTGAAGAGGAGAGCGAAAA-AGGCGGCTGCTAAAATATCAGGAAGAAGAG 834 Query 823 TCTCAATGGTTACAGGTG-AAGAAGCATCATCGA-AAACGGA-AA-A-AAGTCTAGATGG 877 | || || || | ||| ||| | | || ||| ||| | | || | || | | ||||| Sbjct 835 TTTCGATAGT-A--GGTTTAAGT-GAAACACCGACAAA-GAACAAGAGAAATTTGGATGG 889 Query 878 GATTGATATGAGATGCAAAGTGGTTGACTTTGGTAACGCTTGTTGGGCTGATAA-ACAGT 936 ||||||||||||||||||||| || |||||||| |||| |||||||||||||| | | | Sbjct 890 GATTGATATGAGATGCAAAGTTGTCGACTTTGGGAACGGGTGTTGGGCTGATAAGAAA-T 948 Query 937 TTGCTGAAGAGATACAAACAAGACAGTATC-GAGCTCCTGAAGTAATACTAAAGTCAGGA 995 |||| ||||| ||||||||||||||||| | ||||||||||||||||||| ||||||| Sbjct 949 TTGCAGAAGAAATACAAACAAGACAGTA-CAGAGCTCCTGAAGTAATACTTCAGTCAGGT 1007 Query 996 TACTCTTTCTCTGTTGATATGTGGTCTTTTG-GTTGTACGGCTTTCGAGCTTG-TCACAG 1053 ||||||| ||||||||||||||||||||| | || |||| ||||||||||||| | |||| Sbjct 1008 TACTCTTACTCTGTTGATATGTGGTCTTTCGCGT-GTACTGCTTTCGAGCTTGCT-ACAG 1065 Query 1054 GAGATATGCTATTT-GCACCTAAAGATGGAAATGGTTATGGGGAAGACGAGGATCACCTT 1112 | |||||||| ||| || || ||||| || |||||||| || ||||||||||| |||||| Sbjct 1066 GTGATATGCT-TTTCGCTCCAAAAGAGGGTAATGGTTACGGAGAAGACGAGGACCACCTT 1124 Query 1113 GCTCTTATGATGGAACTCCTAGGAAAGATGCCTCGAAAGATTGCCATTGGAGGGGCGAAA 1172 |||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||| | Sbjct 1125 GCTCTTATGATGGAACTCTTAGGAAAAATGCCTCGAAAGATTGCCATTGGAGGTGCGAGA 1184 Query 1173 TCGAAAG-ACTACTTTGACAGACACGGGGACTTAAAGAGAATCCG-ACGGTTGAAATATT 1230 || |||| | ||||||||||||||||| ||||| ||||| ||||| | | || ||||| | Sbjct 1185 TC-AAAGGATTACTTTGACAGACACGGCGACTTGAAGAGGATCCGGA-GATTAAAATACT 1242 Query 1231 GGCCACTTGATCGCTTGCTGATTGATAAATATAAGCTTCCGGAAGCAGAAGCAAAGGAGT 1290 ||||||| || || || |||||||||||||| |||||||| ||||||||| || ||| | Sbjct 1243 GGCCACTCGACCGTTTACTGATTGATAAATACAAGCTTCCAGAAGCAGAATCACGGGAAT 1302 Query 1291 TTGCTGAGTTTCTGACT-CC-GATTCTTGAGTTTGCGCCGGAGAAACGACCAACTGCTCA 1348 |||| || ||||| || || |||| | || ||||| || |||||||||||||||||||| Sbjct 1303 TTGCGGAATTTCT--CTGCCCGATTATGGATTTTGCACCTGAGAAACGACCAACTGCTCA 1360 Query 1349 ACAGTG-CTTGGATCATCCATGGATGAATGTAACAACACAGAACGATGCAGA--AAATGT 1405 ||| || || | | ||||||||| ||||| | | ||||||||| ||| ||| |||| Sbjct 1361 ACAATGTCT-GCAACATCCATGGTTGAATCTCAGGACACAGAACAATGAAGATCAAAT-- 1417 Query 1406 AGATGACCAAATGAACAACTTGCATATCAAAGG 1438 ||| | || |||| ||| |||| |||||||| Sbjct 1418 AGAAGGTCAGATGAGTAACATGCAGATCAAAGG 1450 > Ahg343373 jgi|Araly1|343373|fgenesh1_pg.C_scaffold_3003136 Length=3171 Score = 1245 bits (674), Expect = 0.0 Identities = 1134/1349 (84%), Gaps = 60/1349 (4%) Strand=Plus/Plus Query 117 AGAGATATGTCTTGTTCATCTTCTTCCGGATCAGAAGGAGAAGAAGAGGGTTTCGATGCT 176 ||||||||||| |||||||| || || |||||||| | ||| || ||||||||||||||| Sbjct 1843 AGAGATATGTCGTGTTCATCCTCATCTGGATCAGATGAAGACGATGAGGGTTTCGATGCT 1902 Query 177 TACCGTAAAGGTGGTTATCACGCCGTCAGGATCGGCGATCC-TTTTTCCGGTGGTCGTTA 235 |||||||||||||| ||||||||||| || ||||| || || ||| ||||||| ||||| Sbjct 1903 TACCGTAAAGGTGGATATCACGCCGTTAGAATCGGAGA-CCAGTTTGCCGGTGGCCGTTA 1961 Query 236 CATCGCTCAGAGAAAGCTTGGTTGGGGTCAATTCTCCACCGTTTGGCTTGCCTACGATAC 295 ||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 1962 CATTGCTCAGAGAAAGCTTGGTTGGGGCCAATTCTCCACCGTTTGGCTTGCCTATGATAC 2021 Query 296 GCTCACCTCTAA-TGTTTTGCTTTGTATG-TTTTTATG-TCTCTTTGCACAACAATTTGC 352 | ||||||||| | | |||||||| | | || | | | |||| ||||||||| Sbjct 2022 TCGCACCTCTAATTATGTTGCTTTG-AAGATTCAGAAGAGCGCTTT-----ACAATTTGC 2075 Query 353 TCAAGCTGCACTTCACGAAATCGAATTTCTTTC-AGCTGCTGCTGATGGGGAT-CTCGAC 410 ||||||||||||||||||||||||| ||| ||| ||||||||||||||||||| || || Sbjct 2076 TCAAGCTGCACTTCACGAAATCGAACTTC-TTCAAGCTGCTGCTGATGGGGATCCTGGA- 2133 Query 411 AAGACGAAATGTGTTGTTCGTCTTATTGACCATTTCAAGCATAG-TGGTCCAAATGGGCA 469 || || ||||||||||||||||||||||| | |||||||| | ||||| |||||||| Sbjct 2134 AATACCAAATGTGTTGTTCGTCTTATTGATGACTTCAAGCA-CGCAGGTCCCAATGGGCA 2192 Query 470 GCATTTATGCATGGTGCTTGAGTTTCTCGGCGATAGCTTGCTCCGTTTAATCAGATACAA 529 ||||||||||||||||||||||||||| |||||||||||||| ||||| |||| |||||| Sbjct 2193 GCATTTATGCATGGTGCTTGAGTTTCTTGGCGATAGCTTGCTGCGTTTGATCAAATACAA 2252 Query 530 CCAG-TACAAAGGTCTGAAACTGAATAAAGTCCGGGAGATTTGCAGATGTATACTGACTG 588 || | || ||||| || | ||| |||||| |||||||| |||| |||||||||||||| Sbjct 2253 CC-GTTATAAAGGGATGGAGTTGAGTAAAGTGCGGGAGATATGCAAATGTATACTGACTG 2311 Query 589 GTTTAGATTATTTGCACCGTGAGCTCGGTATGATTCACTCCGACTTAAAACCTGAAAACA 648 || ||||||||||||||||||| || |||||||||||||||||||||||||| ||||||| Sbjct 2312 GTCTAGATTATTTGCACCGTGAACTTGGTATGATTCACTCCGACTTAAAACCCGAAAACA 2371 Query 649 TTCTTCTTTGTTCCACCATTGACCCTGCCAAAGATCCCGTTAGATCTGGACTCACCCCAC 708 ||||||||||||||||||||||||||||||| |||||| | ||||| ||||| || ||| Sbjct 2372 TTCTTCTTTGTTCCACCATTGACCCTGCCAAGGATCCCATCAGATCCGGACTAACACCAA 2431 Query 709 TATTAGAAAAACCAGAGGGAAACGCAAA-CGGTGGCGCATCAACAATGAATCTGATTGAG 767 || ||||||| || ||||| ||| |||| |||| | |||||||||||||||||||||| Sbjct 2432 TACTAGAAAAGCCTGAGGGTAAC-CAAAACGGTA-C--ATCAACAATGAATCTGATTGAG 2487 Query 768 AAGAAACTAAAGAGAAGAGCGAAAAGAG-CGGTTGCTAAAATATCAGAAAGAAGAGTCTC 826 ||||| | ||||| |||||||||| || ||| |||||||||||||| ||||||||| || Sbjct 2488 AAGAAGTTGAAGAGGAGAGCGAAAA-AGGCGGCTGCTAAAATATCAGGAAGAAGAGTTTC 2546 Query 827 AATGGTTACAGGTG-AAGAAGCATCATCGA-AAACGGA-AA-A-AAGTCTAGATGGGATT 881 || || | ||| ||| | | || ||| ||| | | || | || | | ||||||||| Sbjct 2547 GATAGT-A--GGTTTAAGT-GAAACACCGACAAA-GAACAAGAGAAATTTGGATGGGATT 2601 Query 882 GATATGAGATGCAAAGTGGTTGACTTTGGTAACGCTTGTTGGGCTGATAA-ACAGTTTGC 940 ||||||||||||||||| || |||||||| |||| |||||||||||||| | | ||||| Sbjct 2602 GATATGAGATGCAAAGTTGTCGACTTTGGGAACGGGTGTTGGGCTGATAAGAAA-TTTGC 2660 Query 941 TGAAGAGATACAAACAAGACAGTATC-GAGCTCCTGAAGTAATACTAAAGTCAGGATACT 999 ||||| ||||||||||||||||| | ||||||||||||||||||| ||||||| |||| Sbjct 2661 AGAAGAAATACAAACAAGACAGTA-CAGAGCTCCTGAAGTAATACTTCAGTCAGGTTACT 2719 Query 1000 CTTTCTCTGTTGATATGTGGTCTTTTG-GTTGTACGGCTTTCGAGCTTG-TCACAGGAGA 1057 ||| ||||||||||||||||||||| | || |||| ||||||||||||| | ||||| || Sbjct 2720 CTTACTCTGTTGATATGTGGTCTTTCGCGT-GTACTGCTTTCGAGCTTGCT-ACAGGTGA 2777 Query 1058 TATGCTATTT-GCACCTAAAGATGGAAATGGTTATGGGGAAGACGAGGATCACCTTGCTC 1116 |||||| ||| || || ||||| || |||||||| || ||||||||||| |||||||||| Sbjct 2778 TATGCT-TTTCGCTCCAAAAGAGGGTAATGGTTACGGAGAAGACGAGGACCACCTTGCTC 2836 Query 1117 TTATGATGGAACTCCTAGGAAAGATGCCTCGAAAGATTGCCATTGGAGGGGCGAAATCGA 1176 |||||||||||||| ||||||| |||||||||||||||||||||||||| |||| ||| | Sbjct 2837 TTATGATGGAACTCTTAGGAAAAATGCCTCGAAAGATTGCCATTGGAGGTGCGAGATC-A 2895 Query 1177 AAG-ACTACTTTGACAGACACGGGGACTTAAAGAGAATCCG-ACGGTTGAAATATTGGCC 1234 ||| | ||||||||||||||||| ||||| ||||| ||||| | | || ||||| ||||| Sbjct 2896 AAGGATTACTTTGACAGACACGGCGACTTGAAGAGGATCCGGA-GATTAAAATACTGGCC 2954 Query 1235 ACTTGATCGCTTGCTGATTGATAAATATAAGCTTCCGGAAGCAGAAGCAAAGGAGTTTGC 1294 ||| || || || |||||||||||||| |||||||| ||||||||| || ||| ||||| Sbjct 2955 ACTCGACCGTTTACTGATTGATAAATACAAGCTTCCAGAAGCAGAATCACGGGAATTTGC 3014 Query 1295 TGAGTTTCTGACT-CC-GATTCTTGAGTTTGCGCCGGAGAAACGACCAACTGCTCAACAG 1352 || ||||| || || |||| | || ||||| || ||||||||||||||||||||||| Sbjct 3015 GGAATTTCT--CTGCCCGATTATGGATTTTGCACCTGAGAAACGACCAACTGCTCAACAA 3072 Query 1353 TG-CTTGGATCATCCATGGATGAATGTAACAACACAGAACGATGCAGA--AAATGTAGAT 1409 || || | | ||||||||| ||||| | | ||||||||| ||| ||| |||| ||| Sbjct 3073 TGTCT-GCAACATCCATGGTTGAATCTCAGGACACAGAACAATGAAGATCAAAT--AGAA 3129 Query 1410 GACCAAATGAACAACTTGCATATCAAAGG 1438 | || |||| ||| |||| |||||||| Sbjct 3130 GGTCAGATGAGTAACATGCAGATCAAAGG 3158 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 61401474940 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5