BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G35560.2
Length=3558
Score E
Sequences producing significant alignments: (Bits) Value
Ahg491090 jgi|Araly1|491090|fgenesh2_kg.7__523__AT4G35560.1 5107 0.0
Ahg934808 jgi|Araly1|934808|scaffold_402796.1 278 3e-73
Ahg909865 jgi|Araly1|909865|Al_scaffold_0001_119 187 4e-46
> Ahg491090 jgi|Araly1|491090|fgenesh2_kg.7__523__AT4G35560.1
Length=3294
Score = 5107 bits (2765), Expect = 0.0
Identities = 3084/3239 (95%), Gaps = 18/3239 (1%)
Strand=Plus/Plus
Query 171 TTATAAGTTAACTTCACCGTTGGATAAAAGATGTTCGTGAAGAAGTTGGTCGAGATAGCA 230
||||||||| |||| ||||| ||||||||||||||||||||||||||||||| ||||||
Sbjct 68 TTATAAGTTCACTTGGCCGTTCGATAAAAGATGTTCGTGAAGAAGTTGGTCGAAATAGCA 127
Query 231 GCCAAGAAGCCTGGAGGAAGTTCATCAGAAGGACTGAGAGCTAATGACGTTGAGCCACGT 290
|| ||||||||||||||||| ||| | |||||||||||||||||||||||||||||||||
Sbjct 128 GCGAAGAAGCCTGGAGGAAGCTCAACGGAAGGACTGAGAGCTAATGACGTTGAGCCACGT 187
Query 291 ATCGCTCTGCATTACGGAATCCCTTCAGGTTCTCACTTGTTTGCTTATGATCCATTTCAG 350
||||||||||||| |||||||| |||||||||||| ||||||||||||||||| |||||
Sbjct 188 GTCGCTCTGCATTATGGAATCCCGTCAGGTTCTCACGTGTTTGCTTATGATCCAATTCAG 247
Query 351 AAGATCCTCGCCGTTTCCACCAAGGATGGTAGAATCAAGTTGTTTGGGAAAGATCAGACC 410
||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 248 AAGATCCTCGCTGTTTCCACCAAGGATGGTAGAATCAAACTGTTTGGGAAAGATCAGACT 307
Query 411 CAGGCTTTGCTAGTCTCTGAAGAAACATCCACAAGCAGGTTTCTTGAGTTTGTTCAGAAC 470
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 308 CAGGCTTTACTAGTGTCTGAAGAAACATCCACAAGCAGGTTTCTTGAGTTTGTTCAGAAT 367
Query 471 CAAGGAATCCTTCTCAATGTGAATTCCAAGAACCAGATTGAGGTTTGGGACTTAGACAAG 530
|||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 368 CAAGGAATTCTTCTCAATGTGAATGCCAAGAACCAGATTGAGGTTTGGGACTTAGACAAG 427
Query 531 AAGCTTCTATCTCATGTTCATGTTTTCAATGGCGAGATCACTTCTTTCCGGGTTATGCAA 590
|||||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct 428 AAGCTTCTGTCTCATGTTCATCATTTCAAAGGCGAGATCACTTCTTTCCGGGTTATGCAA 487
Query 591 CATACCCCTTACTTTTATGTTGGAGATTCTTCTGGTAATGTATCAGTGTTTAAGATCGAA 650
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 488 CATACCCCTTACTTTTACGTTGGAGATTCTTCTGGTAATGTATCAGTGTTTAAGATCGAA 547
Query 651 CAAGATTCTAATCAAGTTATACAACTGGAGTACACCATACCTTACCTAGCATCAAATGGC 710
|||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||
Sbjct 548 CAAGATTCTAATCAAGTTATACAAATGGAGTACACTATACCTTACTTAGCATCAAATGGC 607
Query 711 TCTCCCATTGAAGCTTCTGAGGATACTTCAGTTGTGAGCATTCTACCACAGCTAACAGCT 770
|||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 608 TCTCCCGTTGAAGCTTCTGAGGATACTTCAGTTGTGAGCATTCTACCACAGCCAACAGCT 667
Query 771 GAAAGCAAGAGGATTCTA-TTGGTATTTAGTAGCGGGTTTATAGCGTTATGGGACATCAA 829
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct 668 GAAAGCAAGAGGATTCTACTT-GTATTTAGTAGCGGGTTTATAGCGTTATGGGACATCAA 726
Query 830 AGAAAGCAAACCGATTCTCAAAACAGGAGTACACGGTATGGTAAAGCAAGATACGAAGAA 889
|||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||
Sbjct 727 AGAAAGCAAACCGATTCTGAAAACAGGAGTACACGGGATGGTAAAGCAAGACACGAAGAA 786
Query 890 AGCGACTTGTGCTTGTTGGGTTTGTCCTTCAGGAAGCAGAGTTTCAGTTGGCTATAGCAA 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 787 AGCGACTTGTGCTTGTTGGGTTTGTCCTTCAGGAAGCAGAGTTTCAGTTGGCTATAGCAA 846
Query 950 TGGAGATATTCTAATATGGAGCATTCCTTCCAAAGGAGAATGCTCGCCAGAGAGTTCTGC 1009
||| |||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 847 TGGTGATATTTTAATATGGAGCATTCCTTCCAAAGGGGAAAGCTCGCCAGAGAGTTCTGC 906
Query 1010 TATGATTTGCAAGCTTAACCTCGGATACAAATCCGAAAAGATACCAATAGCTTCTCTGAA 1069
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 907 TATGATTTGCAAGCTTAACCTCGGATACAAATCCGAGAAGATACCAATAGCTTCTCTGAA 966
Query 1070 ATGGGTTTATGCTGAAGGGAAGGCAAGCCGGGTTTATGTCATTGGATCATCCTCAAACTC 1129
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 967 ATGGGTTTATGCTGAAGGGAAAGCAAGCCGGGTTTATGTCATTGGATCATCCTCAAACTC 1026
Query 1130 GTTGCAGGTGGTTTTGTTGAATGAGCAAACCGAAACTCGGATGATTAAGCTGGGACTTCA 1189
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1027 GTTGCAGGTGGTTTTATTGAATGAGCAAACCGAAACTCGGATGATTAAGCTGGGACTTCA 1086
Query 1190 TGTTTCTGAGCCTTGTGCTGATATGGAGATGATCATAGCTGATGTTAATGAACAGAGCAA 1249
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1087 TGTGTCTGAGCCTTGTGCTGATATGGAGATGATCATAGCTGATGTTAATGAACAAAGCAA 1146
Query 1250 GCATAAACAAGATTTTCTGTTTGTTCTTGGAAAGTCTGGACGTGTCTATGCTTACGATGA 1309
|||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 1147 GCATAAACAAGATTATCTGTTTGTTCTTGGAAAGTCTGGACGTGTGTATGCTTATGATGA 1206
Query 1310 TTATATGATTGAGAAGTATCTGATTCAGTCTC-AGTCCAAATCATCTCCTTCCCTCCCAA 1368
||||||||| ||||||||||||||||| |||| | ||||||||||| ||||| |||||||
Sbjct 1207 TTATATGATCGAGAAGTATCTGATTCAATCTCTA-TCCAAATCATCCCCTTCTCTCCCAA 1265
Query 1369 AGGAAACTGTGGTTAAGCTGCCATTTTCAGATTCAAGCAGCATTACCGTAGGAAAATTCC 1428
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 1266 AGGAAACTGTGGTTAAGCTGCCATTTTCAGATTCAAGCAGCATCACAGTAGGAAAATTCC 1325
Query 1429 TCACAAATCCTTCACACTTACTCAATCTATCAGATGAGGATTATGCTCAGCTGGCGAAAG 1488
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1326 TCACAAATCCTTCTCACTTACTTAATCTATCAGATGAGGATTATGCTCAGCTGGCGAAAG 1385
Query 1489 ATGCTGTGCCGTTTCTTCCTTTTCATACAGTTCCAAAGGAAAGTTCCCGTTCTGCACATT 1548
||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 1386 ATGCTGTGCCGTTTCTTCCTTTTCAGGCAGTTCCAAAGGAAGGTTCCCGTTCTGCACATT 1445
Query 1549 TTCCTGGTTTCACAAAGGTTAAGAATGTTTACATCACAGGACACTGTGACGGAACCATTA 1608
||||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||
Sbjct 1446 TTCCTGGTTTCACAAAGGTTAAGAATGTTTACATCACTGGACACAGTGATGGAACCATTG 1505
Query 1609 GTGTATGGGACATGACCTGTTCTTTTCCCATTCTTGTCTTGTTTCTGAAAGAACAGCAGA 1668
|||||||||||||||||||| |||||| |||| ||||||||||||||||| | | ||||
Sbjct 1506 GTGTATGGGACATGACCTGTCCTTTTCTTATTCCTGTCTTGTTTCTGAAAG-A-A-CAGA 1562
Query 1669 TAGATCAAGATGTATCTTCACGCGGAAATGCGGCATTGACAGCTTTACATTATGACAGCA 1728
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1563 CCGATCAAGATATATCTTCACGCGGAAATGCGGCATTGACAGCTTTGCATTATGACAGCA 1622
Query 1729 ACTCAAGACTTCTTGTTTCTGGTGATCATAACGGAATGGTTCGCCTTTATAGGTTCAAAC 1788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1623 ACTCAAGACTTCTTGTTTCTGGTGATCATAACGGAATGGTTCGCCTTTATAGGTTCAAAC 1682
Query 1789 CTGAGCCATACCTAACAGAAAACAGTTTTATCCCTTTCCAAGGAAGCTT-AAAGAAAGGA 1847
||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||
Sbjct 1683 CTGAGCCATACCTAACAGAAAACAGTTTTATTCCTTTCCAAGGAAG-TTCAAAGAAAGGG 1741
Query 1848 AATAACCATATTGTTCAAAGTGTTAAGTACATCAAGCTTACTGGTTCCATAACCTGTATT 1907
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct 1742 AATAACCATATTGTTCAAAGTGTTAAGTACGTAAAGCTTACTGGTTCCATAACCTGTATT 1801
Query 1908 CAGAAGAGCCAAAACTCAAAACATCTCGCTATTGGATCAGATCAAGGACATGTTTCTCTG 1967
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1802 CAGAAAAGCCAAAACTCGAAACATCTCGCTATTGGATCAGATCAAGGACATGTTTCTCTG 1861
Query 1968 GTTGACATTGAGGAAGCAAATGTGTTATACACAAAACACATTGCAAGTGATATATGTCCA 2027
|||||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||
Sbjct 1862 GTTGACATTGAGGAAGCAAATGTGATATACACAAAACACATTGGAAGTGTTATATGTCCA 1921
Query 2028 GGGATCATCTCCT-TGCAATTCGAGAGTTGCATTGTGCAAGGCTTCGAGAAGAACGTGTT 2086
|||||||||| || ||||||| || |||||| |||||||||||||||||||||||||||
Sbjct 1922 GGGATCATCT-CTGTGCAATTTGATTGTTGCAGTGTGCAAGGCTTCGAGAAGAACGTGTT 1980
Query 2087 AGTGGTTGCTATGAGAGACTCGTCGGTTTTTGCTCTGGACAGCGACACGGGAAATATGAT 2146
|||||| |||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1981 AGTGGTCGCTATGAGAGACTCATCAATTTTTGCTCTGGACAGCGACACGGGAAATATGAT 2040
Query 2147 TGGAACCAACATGATTAAGCCTAAAAAGCCATTCAAGGTTCTGTATATGCAGATCCTAGA 2206
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 2041 TGGAACCAACATGATTAAGCCAAAAAAGCCATTCAAGGTTCTATATATGCAGATCCTAGA 2100
Query 2207 TGGAAAGCAAGATACTTCAGGAAATGGATTTGATACGAGCAGAGAGAGCACAGTTGAGGA 2266
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2101 TGGAAAACAAGATACTTCAGGAAATGGATTTGATACGAGCAGAGAGAGCACAGTTGAGGA 2160
Query 2267 GATCTCGATAAGGCAGCCTTCGGTTTTGGTTTGTTCGGAGAAAGCTATATATATCTACTC 2326
||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2161 GATTTCGATAAGGCAGCCTTCGGTTTTGGTTTGCTCGGAGAAAGCTATATATATCTACTC 2220
Query 2327 CTTGGCTCACGTTGTCCAGGGAGTGAAGAAGGTCCTCCACAAGAAAAAGTTCAGTTCTTC 2386
| |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 2221 CCTGGCTCACGTTGTCCAAGGAGTGAAGAAGGTCCTTCACAAGAAAAAGTTCAGTTCTTC 2280
Query 2387 ACCCATTTGCTCAGCTTCCACATTCTATGGAACCTCTGGTGTTGGTCTTACACTTGTTTT 2446
||| || |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2281 ACCAATATGCTCAGCTTCCACTTTCTATGGAACCTCTGGTGTTGGTCTTACACTTGTTTT 2340
Query 2447 CACAGATGGAACTGTTGAGATAAGGTCTTTGCCAGAACTCTCCCAGCTAAAACAAACTTC 2506
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2341 CACAGATGGAACTGTTGAGATAAGGTCTTTGCCAGAACTCTCCCTGCTAAAACAAACTTC 2400
Query 2507 CATTAGAGGCTTCACATATTCTTCACCAAAACCAAACTCGTTACCAGAGATTACCATATC 2566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2401 CATTAGAGGCTTCACATATTCTTCACCAAAACCAAACTCGTTACCAGAGATTACCATATC 2460
Query 2567 CGCTTCTTGGGATGGAGATCTAGTCATGGTGAATGGAGATGATGAACTTATTGTTAGCTC 2626
||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 2461 TGCTTCTTGGGATGGAGATCTAGTCATGGTGAATGGAGATGATGAACTCATTGTCAGCTC 2520
Query 2627 AGTTTTACCTCAAAAGGAAACTTTTAGGCTTGTCGAGTCCATGAATCGAGTTTACAAGAA 2686
|||||||||||||||||| || || ||||||| ||||||||||| ||||||||||||||
Sbjct 2521 AGTTTTACCTCAAAAGGACACATTCAGGCTTGCCGAGTCCATGAGCCGAGTTTACAAGAA 2580
Query 2687 AGATAACTCGGTTTGTCACGAAGGAATCATCACATCATCATCTCCAAGGGAAAAGAAGAG 2746
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2581 AGATAACGCGGTTTGTCACGAAGGAATCATCACTTCATCATCTCCAAGGGAAAAGAAGAG 2640
Query 2747 TATGTTTGGTTCTGTTTTCAAGACTAAATCAAAGCGCACAACTGATACAGAACCAGAAAG 2806
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||
Sbjct 2641 TATGTTTGGTTCTGTTTTCAAGACTAAATCGAAGCGCGCAACTGATACAGAACCAGAAAG 2700
Query 2807 CTCCAAGGAAA-CGATCGAGGAGCTGTCTAAAATCTTCT-CTACAGCTAATTTCCCCTGG 2864
||||||||||| || |||||||||||||||||||||| | | |||||||||||||| |||
Sbjct 2701 CTCCAAGGAAACCG-TCGAGGAGCTGTCTAAAATCTT-TGCAACAGCTAATTTCCCATGG 2758
Query 2865 AACAACAATGTTGAGAATAGTAGAGAGATCAATACAATTACTAGGGTGGAAGATGAAGAA 2924
|||||||||||||||| ||||||||||||||||||| ||||||| ||||| |||||||||
Sbjct 2759 AACAACAATGTTGAGAGTAGTAGAGAGATCAATACAGTTACTAGAGTGGACGATGAAGAA 2818
Query 2925 GAGTTGGACATAGATGACATTGACATTGACGATCATCATCCTAATCAACAACAACAAGAG 2984
|||||||||||||||||||||||||| ||||||||||||| || | ||||||||||||
Sbjct 2819 GAGTTGGACATAGATGACATTGACATCGACGATCATCATCATAGT---CAACAACAAGAG 2875
Query 2985 AAGCCTAAAGAACAAGGGATATTGTCAGGGCTTAGTAAACAGAAGATGGCGAATAGGTTT 3044
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2876 AAGCCTAAAGAACAAGGGATATTGTCAGGGCTTAGTAAACAGAAAATGGCGAATAGGTTT 2935
Query 3045 AGTAATTTCAAAGGTAAGCTGAAACAGATGGCAGCTAAGAATGAGAAGAGTGTTGTAACC 3104
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2936 AGCAATTTCAAAGGTAAGCTGAAACAGATGGCAGCTAAGAATGAGAAGAGTGTTGTAATT 2995
Query 3105 AATGACGAGAAGCATGAGGAGAAAAACGGCGCCACAGTTGATCAGATCAAGAAGAAATAC 3164
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2996 AATGACGAAAAGCATGAGGAGAAAAATGGCGCCACAGTTGATCAGATCAAGAAGAAATAC 3055
Query 3165 GGGTTTACCTCGTCCGATGAAATGGGAGCTGCCAAAATGGCTCAGAGCAAACTTCAAGAC 3224
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3056 GGGTTTACCTCGTCCGAGGAAATGGGAGCTGCCAAAATGGCTCAGAGCAAACTTCAAGAC 3115
Query 3225 AACCTGAAAAAGTTACAGGGAATTAGCTTGAGGACGACGGAAATGGAAGATACTGCAAAG 3284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3116 AACCTGAAAAAGTTACAGGGAATTAGCTTGAGGACGACGGAAATGGAAGATACTGCAAAG 3175
Query 3285 TCTTTCTCCTCTACGGCAAAGGAACTACTAAACGCTGTTGAGTTCAATAAACAGAGCTCA 3344
||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 3176 TCTTTCTCCTCTACGGCAAAGGAACTACTAAGTGCGGTTGAGTTCAATAAACAGAGCTCA 3235
Query 3345 AAATCTTAGCACTCTTTTTCTCTGGATGTCAAAATTACCTACTGTAAATACTTTCTTCA 3403
||| ||||||| |||||| ||| |||||||||||||| |||||||||||||||||||||
Sbjct 3236 AAACCTTAGCAGTCTTTTACTCGGGATGTCAAAATTAGCTACTGTAAATACTTTCTTCA 3294
> Ahg934808 jgi|Araly1|934808|scaffold_402796.1
Length=295
Score = 278 bits (150), Expect = 3e-73
Identities = 163/169 (96%), Gaps = 1/169 (1%)
Strand=Plus/Plus
Query 3013 GGCTTAGTAAACAGAAGATGGCGAATAGGTTTAGTAATTTCAAAGGTAAGCTGAAACAGA 3072
|||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct 4 GGCTTAGTAAGCAGAAGATGGTGAATAGGTTTAGCAATTTCAAAGGTAAGCTGAAACAGA 63
Query 3073 TGGCAGCTAAGAATGAGAAGAGTGTTGTAACCAATGACGAGAAGCATGAGGAGAAAAACG 3132
||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||
Sbjct 64 TGGCAGCTAAGAATGAGAAGAGTGTTGTAACCAATGA-GAAAAGCATGAGGAGAAAAACG 122
Query 3133 GCGCCACAGTTGATCAGATCAAGAAGAAATACGGGTTTACCTCGTCCGA 3181
||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 123 GCGCCACAGTTGATCAGATCAAGAAGAAATACGGGTTTAACTCGTCCGA 171
Score = 198 bits (107), Expect = 2e-49
Identities = 115/119 (97%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 3249 AGCTTGAGGACGACGGAAATGGAAGATACTGCAAAGTCTTTCTCCTCTACGGCAAAGGAA 3308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 171 AGCTTGAGGACGACGGAAATGGAAGATACTGCAAAGTCTTTCTCCTCTACGGCAAAGGAA 230
Query 3309 CTACTAAACGCTGTTGAGTTCAATAAACAGAGCTCAAAATCTTAGCACTCTTTTTCTCT 3367
||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 231 CTACTAAGTGTTGTTGAGTTCAATAAACAGAGCTCAAAATCTTAGCATTCTTTTTCTCT 289
> Ahg909865 jgi|Araly1|909865|Al_scaffold_0001_119
Length=198
Score = 187 bits (101), Expect = 4e-46
Identities = 127/139 (91%), Gaps = 3/139 (2%)
Strand=Plus/Plus
Query 2918 TGAAGAAGAGTTGGACATAGATGACATTGACATTGACGATCATCATCCTAATCAACAACA 2977
|||||||||| | |||||||||||||||||||| ||||||||||||| || | |||||
Sbjct 18 TGAAGAAGAGCTAGACATAGATGACATTGACATCGACGATCATCATCATAGT---CAACA 74
Query 2978 ACAAGAGAAGCCTAAAGAACAAGGGATATTGTCAGGGCTTAGTAAACAGAAGATGGCGAA 3037
|||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||
Sbjct 75 ACAAGAGAAGCCTAAAGAACAAGGGATATTGTCACGGCTTAGTAAGCAGAAGATGGTGAA 134
Query 3038 TAGGTTTAGTAATTTCAAA 3056
||||||||| |||||||||
Sbjct 135 TAGGTTTAGCAATTTCAAA 153
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 134381290263
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5