BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G35780.1
Length=2110
Score E
Sequences producing significant alignments: (Bits) Value
Ahg491066 jgi|Araly1|491066|fgenesh2_kg.7__499__AT4G35780.1 3293 0.0
Ahg931631 jgi|Araly1|931631|scaffold_304088.1 1367 0.0
> Ahg491066 jgi|Araly1|491066|fgenesh2_kg.7__499__AT4G35780.1
Length=2049
Score = 3293 bits (1783), Expect = 0.0
Identities = 1970/2059 (96%), Gaps = 18/2059 (1%)
Strand=Plus/Plus
Query 51 tctaatcttttcgcctttagttgaatctctGGGATCATTCTACCTTTTT-GTGGATTTAG 109
||||||||| || |||||| |||||||| | |||||||||| ||||||| || |||||||
Sbjct 1 TCTAATCTTCTCACCTTTACTTGAATCT-T-GGATCATTCT-CCTTTTTCGT-GATTTAG 56
Query 110 GATCGAAGAAGAGATCACTCCTACTGTTGAA---TTCTGGTTTTACTTGA-GAGAGTTTT 165
||||||||||||||||||||||||||||||| || ||||||| || | |||| ||
Sbjct 57 GATCGAAGAAGAGATCACTCCTACTGTTGAATTTTTTTGGTTTT-GTTTACTTGAGTGTT 115
Query 166 TCAATTCTGATCTGCTGTTTTGCGATGGCGATCAAAGAGGAGACGGAGGAGAGTTGCGGA 225
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 116 TCAATTCTGATCTGCTGTTTTCCGATGGCGATCAAAGAGGAGACGGAGGAGAGTTGCGGA 175
Query 226 AGCAGAGCCGTGGTAGCTTCAATAACGAAAGAAAGCCCTAGACAGCACCGTATGAAACTG 285
|||||||| || ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 176 AGCAGAGCAGTAGTAGCTTCAATAACGAAAGAAAGCCCTAGACAGCATCGTATGAAACTT 235
Query 286 GAGGTGTACGGTGAGGTTCTTCAACGAATCCAGGAATCCAATTACGAAGAAGCTAATTTC 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 236 GAGGTGTACGGTGAGGTTCTTCAACGAATCCAGGAATCCAATTACGAAGAAGCTAATTTC 295
Query 346 CCTGGTTTTGATGATCTCCTCTGGCTTCACTTCAATCGTCTTCCTGCTCGATATGCTTTG 405
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct 296 CCTGGTTTTGATGATCACCTCTGGCTTCACTTCAATCGTCTTCCTGCTAGATATGCTTTG 355
Query 406 GATGTAAATGTTGAGAGAGCAGAAGATGTACTTACTCATCAGAGATTGTTGAAATTGGCT 465
||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 356 GATGTTAATGTTGAGAGAGCAGAAGATGTTCTTACTCATCAGAGATTGTTGAAATTGGCT 415
Query 466 GAAGAT-CCTGCTACTAGACCTGTTTTCGAAGTTCGTTGTGTGCAGGTTTCTCCCACATT 524
|||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 416 GAAGATCCCT-CTACTAGACCTGTTTTCGAAGTTCGTTGTGTACAGGTTTCTCCCACATT 474
Query 525 GAATGGAAATTCTGGTGACGTTGATCCTTCGGATCCTGCGGTCAATGAAGATGCTCAAAG 584
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 475 GAATGGAAATTCTGGTGACGTTGATCCTTCAGATCCTGCGGTCAAGGAAGATGCTCAAAG 534
Query 585 CTCCTATAACTCGAGGTCTCTTGCACCTCCAACTTTTGGTTCTTCTCCGAATTTCGAAGC 644
||| |||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 535 CTCTTATAACTCGAGGCCTCTTGCACCTCCAACTTTTGGTTCTTCTCCGAATTTCGAGGC 594
Query 645 TCTTACTCAAG-CTTACAAAGATCATGCTCAAGACGATGATAGTGCTGTCAATGCACAGT 703
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct 595 TCTTACTCAAGCCTT-CAAAGATCATGCTCAAGACGATGATAGTGCTGTCAATGCACACT 653
Query 704 TGCCTAATTCTCGACCGATGCACGAAATCACCTTTTCTACAATCGACAGGCCGAAACTCC 763
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 654 TGCCTAATTCTCGACCGATGCACGAAATCACCTTTTCTACAATAGACAGGCCCAAACTCC 713
Query 764 TTAGTCAGCTAACTTCCATGCTTGGTGAACTTGGATTGAATATTCAAGAGGCTCATGCTT 823
|||||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 714 TTAGTCAGTTAACTTCAATGCTTGGTGAACTTGGATTGAATATTCAAGAAGCTCATGCTT 773
Query 824 TCTCTACCGCCGATGGTTTCTCTCTCGATGTATTTGTTGTTGATGGCTGGTCGCAGGAGG 883
|||||||||| |||||||||||| | |||||||| ||||||||||| |||||||||||||
Sbjct 774 TCTCTACCGCGGATGGTTTCTCTTTGGATGTATTCGTTGTTGATGGTTGGTCGCAGGAGG 833
Query 884 AAACAGAAGGTTTAAAAGATGCATTGAAGAAGGAGATAAGAAAGTTTAAGGATCAACCTT 943
||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||
Sbjct 834 AAACAGAAGGTTTAAAAGATGCATTGACGAAGGAGATAAGGAAGCTTAAGGATCAACCTT 893
Query 944 GTTCAAAACAGAAATCTATCACTTTCTTTGAGCATGACAAATCAACCAACGAGCTGCTAC 1003
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 894 GTTCAAAACAGAAATCTATCACTTTCTTCGAGCATGACAAATCAACCAACGAGCTGCTAC 953
Query 1004 CTGCGTGTGTTGAAATACCTACGGATGGAACTGATGAGTGGGAAATTGACATGAAGCAGC 1063
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 954 CTGCATGTGTTGAAATACCTACGGATGGAACTGATGAGTGGGAAATTGACATGAAACAGC 1013
Query 1064 TCAAAATTGaaaaaaaGGTGGCATGTGGATCATACGGGGAACTATTTAGAGGAACCTATT 1123
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1014 TCAAAATTGAAAAAAAGGTGGCATGTGGATCATACGGAGAACTATTTAGAGGAACCTATT 1073
Query 1124 GTAGTCAGGAAGTAGCTATCAAAATTCTCAAGCCTGAGCGTGTTAATGCGGAAATGCTAC 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1074 GTAGTCAGGAAGTAGCTATCAAAATTCTCAAGCCTGAGCGTGTTAATGCGGAAATGCTAC 1133
Query 1184 GAGAGTTTTCTCAGGAAGTATATATAATGAGGAAAGTTCGGCATAAAAATGTTGTCCAGT 1243
||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1134 GAGAGTTTTCTCAGGAAGTGTATATAATGAGGAAAGTCCGGCATAAAAATGTTGTCCAGT 1193
Query 1244 TCATTGGTGCATGTACACGATCACCAAACCTCTGCATTGTGACAGAGTTCATGACTCGGG 1303
| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1194 TTATCGGTGCATGTACACGATCACCAAACCTCTGCATTGTGACTGAGTTCATGACTCGGG 1253
Query 1304 GGAGCATTTATGATTTCCTTCACAAACACAAAGGGGTTTTTAAAATTCAATCTTTGCTCA 1363
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1254 GGAGCATTTATGACTTCCTTCACAAACACAAAGGCGTTTTTAAAATTCAATCTTTGCTCA 1313
Query 1364 AAGTGGCACTCGACGTCTCGAAAGGAATGAATTATCTGCATCAAAACAATATTATTCATA 1423
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1314 AAGTGGCACTTGACGTCTCGAAAGGAATGAATTATCTGCATCAAAACAATATTATTCATA 1373
Query 1424 GAGACCTTAAGACTGCTAATCTTCTTATGGACGAACATGAAGTTGTCAAAGTTGCCGATT 1483
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1374 GAGACCTTAAGACTGCTAATCTTCTTATGGACGAACATGAAGTTGTCAAGGTTGCCGATT 1433
Query 1484 TTGGTGTTGCCAGAGTGCAGACTGAGTCAGGGGTTATGACAGCGGAAACAGGGACATACC 1543
|||| ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||
Sbjct 1434 TTGGGGTTGCCAGAGTGCAGACTGAGTCGGGGGTCATGACAGCTGAAACAGGGACATACC 1493
Query 1544 GATGGATGGCTCCAGAGGTCATTGAGCACAAACCTTATGATCACAGGGCAGATGTCTTCA 1603
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1494 GATGGATGGCTCCAGAGGTCATTGAGCACAAACCTTATGATCACAGGGCGGATGTCTTCA 1553
Query 1604 GCTACGCGATTGTGCTGTGGGAACTTTTGACTGGGGAACTCCCATATTCTTACTTGACTC 1663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1554 GCTACGCGATTGTGCTGTGGGAACTTTTGACTGGGGAACTCCCATATTCTTACTTGACTC 1613
Query 1664 CACTGCAAGCTGCTGTTGGCGTTGTCCAAAAGGGACTTAGACCAAAAATTCCAAAGGAAA 1723
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1614 CACTACAAGCTGCTGTTGGCGTTGTCCAAAAGGGACTTAGACCAAAAATTCCAAAGGAAA 1673
Query 1724 CACACCCAAAACTGACTGAACTTCTTGAGAAATGCTGGCAGCAAGACCCAGCTCTAAGAC 1783
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1674 CACATCCAAAACTGACTGAACTTCTTGAGAAATGCTGGCAGCAAGACCCAGCTCAAAGAC 1733
Query 1784 CCAATTTTGCAGAAATCATAGAAATGCTTAACCAACTAATCCGCGAGGTTGGAGATGATG 1843
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1734 CCAATTTTGCAGAAATCATAGAAATGCTTAACCAACTGATCCGCGAGGTTGGAGATGATG 1793
Query 1844 AGCGCCACAAGGATAAACATGGTGGTTACTTTTCAGGCCTaaaaaaaGGCCATCGTTGAC 1903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1794 AGCGCCACAAGGATAAACATGGTGGTTACTTTTCAGGCCTAAAAAAAGGCCATCGTTGAC 1853
Query 1904 TCTCTCGGGTGCGCTGAAAAATTTGGTTTGATCGGTTTGATAGAGCTCTACTCACTTCTC 1963
||| |||||||||||||| |||| ||||||| ||||||||||||||||||||||||||
Sbjct 1854 ACTCACGGGTGCGCTGAAACTTTTG-TTTGATCAGTTTGATAGAGCTCTACTCACTTCTC 1912
Query 1964 GTTTTTTCGTTGTACAGTTTCTTAGAGCCTCACTCTTTTTGTCCATGTATAATTTTCTTA 2023
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1913 GTTTTT-CGTTGTACAGTTTCTTAGAGCCTCACTCTTTTTGTCCATGTATAATTTTGTTT 1971
Query 2024 AAAAACAATCTCCTTTTGATACAATTATCACTGCAGAGATTGATTTGGATTGCAACTCAA 2083
||| |||||||||||||||||||| ||||||||||||||||| ||| |||||| |||||
Sbjct 1972 AAA--CAATCTCCTTTTGATACAATGATCACTGCAGAGATTGACTTGCATTGCAGCTCAA 2029
Query 2084 TAAAGTGAAAGCCATTCTT 2102
|||||||||||||||||||
Sbjct 2030 TAAAGTGAAAGCCATTCTT 2048
> Ahg931631 jgi|Araly1|931631|scaffold_304088.1
Length=1686
Score = 1367 bits (740), Expect = 0.0
Identities = 1364/1658 (82%), Gaps = 72/1658 (4%)
Strand=Plus/Plus
Query 181 TGTTTTGCGATGGCGATCAAAGAGGAGACGGAGGAGAGTTGCGGAAGCAGAGCCGTGGTA 240
|||||| ||||| |||||||||| ||| | |||||||||||| || ||||| || ||
Sbjct 14 TGTTTTCCGATGACGATCAAAGACGAGTC---GGAGAGTTGCGGTAGTAGAGCGGTCGTT 70
Query 241 GCTTCAATAACGAAAGAAAGCCCTAGACAGCACCGTATGAAACTGGAGGTGTACGGTGAG 300
||||| | |||||| ||||||||| |||| |||||||| || || ||| |||||
Sbjct 71 GCTTCGCCGGCTCAAGAAAACCCTAGACATTACCGGATGAAACTTGATGTCTACAGTGAG 130
Query 301 GTTCTT-CAACGAATCCAGGAATCCAATTACGAAGAAGCTAAT-TTCCCTGGTTTTGATG 358
||| || || ||| | || ||||| |||||||||||||||| | || |||| ||| || |
Sbjct 131 GTT-TTACAGCGACTTCAAGAATCTAATTACGAAGAAGCTACTCTT-CCTGATTTCGAGG 188
Query 359 ATCTCCTCTGGCTTCACTTCAATCGTCTTCCTGCTCGATATGCT-TTGGATG-TAAATGT 416
||| || ||||| || ||||||||||||||||||||||||||| || |||| |||| ||
Sbjct 189 ATCAACTTTGGCTCCATTTCAATCGTCTTCCTGCTCGATATGCTCTT-GATGTTAAA-GT 246
Query 417 TGAGAGAGCAGAAGATGTACTTACTCATCAGAGATTGTTGAAATTGGCTGAAGATCCTGC 476
||||||||| |||||||| ||||||||||||||||| | |||||||| |||||||||||
Sbjct 247 TGAGAGAGCGGAAGATGTTCTTACTCATCAGAGATTACTAAAATTGGCGGAAGATCCTGC 306
Query 477 TACTAGACCTGT-TTTCGAAGTTCGTTGTGTGCAGGTTTCTCCCACATTGAATGGAAATT 535
||||| ||||| ||| ||||||||| |||| ||||||||| | | | | | ||
Sbjct 307 AACTAGGCCTGTCTTT-GAAGTTCGTAGTGTACAGGTTTCT--C-C--T--A--G-AA-G 354
Query 536 CTGGTGACGTTGATCCTTCGGATCCTGCGGTCAATGAAGATGCTCAAAG--CT--CCTA- 590
|| || | ||| | || || |||||||| | |||||||||||||| || || |
Sbjct 355 CT-CTG-C--TGA--C-TCTGACCCTGCGGTGGAGGAAGATGCTCAAAGCTCTCACCAAC 407
Query 591 TAA-C--TC--GAGGTCTCTTGCACCTCCAACTTTTGGTTCTTCTCCGAATTTCGAAGCT 645
|| | | | ||| |||||| ||||||||||||||||||||||| ||||| || |||
Sbjct 408 CAAGCGGACAGGGGGT-TCTTGCTCCTCCAACTTTTGGTTCTTCTCCAAATTTTGAGGCT 466
Query 646 CTTACTCAAGCTTA-CAAAGATCATGCTCAAGACGATGATAGTGCTGTCAATGC-ACAGT 703
|||||| || | ||| || || | |||| | |||||||| ||| ||||| ||| |
Sbjct 467 ATTACTC-AGGGAAGTAAA-AT--TGTTGAAGATGTTGATAGTGTTGTGAATGCAACA-T 521
Query 704 TGCCTAATTCTCGACCGATGCACGAAATCACCTTTTCTACAATCGACAGGCCGAAACTCC 763
|| || | ||||||| |||||||| ||||| ||||| || ||||| | ||||||||||
Sbjct 522 TGTCT-A--CTCGACCAATGCACGAGATCACATTTTCAACCATCGATAAACCGAAACTCC 578
Query 764 TTAGTCAGCTAACTTCCATGCTTGGTGAACTTGGATTGAATATTCAAGAGGCTCATGCTT 823
|||| |||||||||||| |||||||||| |||||| ||||||| ||||||||||||||||
Sbjct 579 TTAGCCAGCTAACTTCCCTGCTTGGTGAGCTTGGACTGAATATACAAGAGGCTCATGCTT 638
Query 824 TCTCTACCGCCGATGGTTTCTCTCTCGATGTATTTGTTGTTGATGGCTGGTCGCAGGAGG 883
| || || | |||||||||||||| ||||| ||||| |||||||| ||||| |||||||
Sbjct 639 TTTCCACTGTAGATGGTTTCTCTCTAGATGTCTTTGTAGTTGATGGTTGGTCTCAGGAGG 698
Query 884 AAACAGAAGGTTTAAAAGATGCATTGAAG-AAGGAGATA-AGAAAGTTTAAGGATCAACC 941
||||||| ||| |||| ||||||||| || || |||||| | ||| |||||||||||||
Sbjct 699 AAACAGATGGTCTAAAGGATGCATTG-AGCAAAGAGATATTG-AAGCTTAAGGATCAACC 756
Query 942 TTGTTCAAAACAGAAATCTATCACTTTCTTTGAGCATGACAAATCAACCAACGAGCTGCT 1001
| || |||||||||||||||| |||||||||||||||||||||||| ||| ||||| |
Sbjct 757 TGGTGCAAAACAGAAATCTATTTCTTTCTTTGAGCATGACAAATCAAGCAATGAGCTTAT 816
Query 1002 ACCTGCGTGTGTTGAAATACCTACGGATGGAACTGATGAGTGGGAAATTGACATGAAGCA 1061
||| || || |||||||||| |||||||||||||||||||||||||||||| |||| ||
Sbjct 817 ACCCGCCTGCATTGAAATACCCACGGATGGAACTGATGAGTGGGAAATTGACGTGAAACA 876
Query 1062 GCTCAAAATTGaaaa-aaaGGTGGCATGTGGATCATACGGGGAACTATTTAGAGGAACCT 1120
||||||||||||||| ||| ||||||| ||| ||||| ||||| || |||||| || |
Sbjct 877 GCTCAAAATTGAAAAGAAA-GTGGCATCTGGTTCATATGGGGATCTGCATAGAGGCACTT 935
Query 1121 ATTGTAGTCAGGAAGTAGCTATCAAAATTCTCAAGCCTGAGCGTGTTAATGCGGAAATGC 1180
|||| ||||||||||||||||||||| ||||||||||||||||||| || || ||||
Sbjct 936 ATTGCAGTCAGGAAGTAGCTATCAAATTTCTCAAGCCTGAGCGTGTAAACAATGAGATGC 995
Query 1181 -TACGAGAGTTTTCTCAGGAAGTATATATAATGAGGAAAGTTCGGCATAAAAATGTTGTC 1239
|| |||| |||||||| ||||| | |||||||||||||||||| || ||||| || ||
Sbjct 996 TTA-GAGAATTTTCTCAAGAAGTTTTTATAATGAGGAAAGTTCGACACAAAAACGTCGTT 1054
Query 1240 CAGTTCATT-GGTGCATGTACACGATCACCAAACCTCTGCATTGTGACAGAGTTCATGAC 1298
|| || || |||||||| ||| |||| |||| |||||| || ||||| ||||| ||| |
Sbjct 1055 CAATT-TTTGGGTGCATGCACAAGATCTCCAACCCTCTGTATAGTGACTGAGTTTATGGC 1113
Query 1299 TCGGGGGAGCATTTATGATTTCCTTCACAAACACAAAGGGGTTTTTAAAATTCAATCTTT 1358
||| |||||||| |||||||| ||||||||||| ||| | | ||| ||| ||||| ||||
Sbjct 1114 TCGAGGGAGCATATATGATTTTCTTCACAAACAGAAATGCGCTTTCAAACTTCAAACTTT 1173
Query 1359 GCTCAAAGTGGCACTCGACGTCTCGAAAGGAATGAATTATCTGCATCAAAACAATATTAT 1418
||| ||||| ||||| || || | |||||||||| ||| ||||||||||||| |||||
Sbjct 1174 GCTTAAAGTTGCACTTGATGTGGCAAAAGGAATGAGCTATTTGCATCAAAACAACATTAT 1233
Query 1419 TCATAGAGACCTTAAGACTGCTAATCTTCTTATGGACGAACATGAAGTTGTCAAAGTTGC 1478
||| || |||||||||||||| |||||||||||||| ||||||| | ||||||| |||||
Sbjct 1234 TCACAGGGACCTTAAGACTGCGAATCTTCTTATGGATGAACATGGACTTGTCAAGGTTGC 1293
Query 1479 CGATTTTGGTGTTGCCAGAGTGCAGACTGAGTCAGGGGTTATGACAGCGGAAACAGGGAC 1538
||||| || |||||||||||||||| ||| ||||| || |||||||| |||||||||||
Sbjct 1294 TGATTTCGGAGTTGCCAGAGTGCAGATTGAATCAGGAGTCATGACAGCTGAAACAGGGAC 1353
Query 1539 ATACCGATGGATGGCTCCAGAGGTCATTGAGCACAAACCTTATGATCACAGGGCAGATGT 1598
||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||
Sbjct 1354 TTACCGGTGGATGGCTCCAGAGGTCATTGAGCACAAACCTTACAATCACAAGGCAGATGT 1413
Query 1599 CTTCAGCTACGCGATTGTGCTGTGGGAACTTTTGACTGGGGA-ACTCCCATATTCTTACT 1657
||||| || ||||| ||||| ||||||||| ||||||| || | |||||||| ||| ||
Sbjct 1414 GTTCAGTTATGCGATAGTGCTATGGGAACTTCTGACTGGTGACA-TCCCATATGCTTTCT 1472
Query 1658 TGACTCCACTGCAAGCTGCTGTTGGCGTTGTCCAAAAGGGACTTAGACCAAAAATTCCAA 1717
|||||||||| ||||| ||||||||||||||||||||||| ||| |||| ||||||||||
Sbjct 1473 TGACTCCACTACAAGCAGCTGTTGGCGTTGTCCAAAAGGGGCTTCGACCGAAAATTCCAA 1532
Query 1718 AG-GAAACACACCCAAAACTGACTGAACTTCTTGAGAAATGCTGGCAGCAAGACCCAGCT 1776
|| ||| ||||||||||| ||| | ||| || |||| ||||||||| |||||||| ||
Sbjct 1533 AGAGAA-CACACCCAAAAGTGAAGGGACTACTAGAGAGATGCTGGCATCAAGACCCGGCA 1591
Query 1777 CTA-AGACCCAAT-TTTGCAG-AAATCATAGAAATGCT 1811
| | ||||| | | |||| || ||||||||||||||||
Sbjct 1592 C-AGAGACC-ACTGTTTG-AGGAAATCATAGAAATGCT 1626
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79380070580
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5