BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G35790.1
Length=3158
Score E
Sequences producing significant alignments: (Bits) Value
Ahg491063 jgi|Araly1|491063|fgenesh2_kg.7__496__AT4G35790.1 4819 0.0
Ahg933838 jgi|Araly1|933838|scaffold_401826.1 226 8e-58
Ahg928800 jgi|Araly1|928800|scaffold_301257.1 226 8e-58
> Ahg491063 jgi|Araly1|491063|fgenesh2_kg.7__496__AT4G35790.1
Length=3138
Score = 4819 bits (2609), Expect = 0.0
Identities = 2987/3165 (94%), Gaps = 44/3165 (1%)
Strand=Plus/Plus
Query 4 CTCTGAGATCTACACGGAATAATGTCGTCAGTGAGCAAACAACTCCCAT-CACGTCGTCC 62
|||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 2 CTCTCAGATCTACACGGAATAATGTCGTCAGTGAGCAAACAACTCCC-TCCACGTCGTCC 60
Query 63 CTCCACCTGTCCTC-TCTTCTCCTTCCTTGCTTGTCTTTCTCTCTCAAATCATTTCACCT 121
|||||| ||||| | |||||| ||||||| ||||||||||||||||||||||||| ||||
Sbjct 61 CTCCACGTGTCC-CGTCTTCTTCTTCCTTCCTTGTCTTTCTCTCTCAAATCATTTTACCT 119
Query 122 AAAAATAATAAATATCTTTCGTTTTCTAAAGaaaaaaaaaaaaaaaaCTTTTCAAATTCA 181
||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct 120 -AAAATAATAAATATCTTTCATTTTCT------AAAAAAAAAAAAAACTTTTCAAATTCA 172
Query 182 TCTTTGGTTTCTGCAGCAGCAACAACAACCGAGCCCTGTTCGTTAGGGTTTTCGGTTTTT 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 173 TCTTTGGTTTCTGCAGCAGCAACAACAACCGAGCCCTGTTCGTTAGGGTTTTCGGTTTTT 232
Query 242 GTTAGCTTttcttcttcttcttcttcGTTTCCTTCCACCTGAATTGTTGTAACCATGGCG 301
|||||| || ||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 233 GTTAGC--TT-TTCTTCTTCTTCTTCGTTTTCTTCCACCTGATTTGTTGTAACCATGGCG 289
Query 302 GAGAAAGTATCGGAGGACGTTATGCTTCTACACGGTGACCTCGATTTGAAAATTGTTAAG 361
|| |||| |||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 290 GATAAAGCATCGGAGGACGTGGTGCTTTTACACGGTGACCTCGATTTGAAAATTGTTAAG 349
Query 362 GCTAGGAGGTTACCTAACATGGATATGTTCTCAGAACATTTGCGCCGTCTCTTCACCGCC 421
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct 350 GCTAGGAGGTTACCTAACATGGATATGTTCTCAGAACATTTGCGCCGTGTTTTCACCGCT 409
Query 422 TGTAACGCCTGTGCTAGACCCACCGATACCGATGATGTCGATCCCAGAGATAAAGGCGAA 481
|||||||||||||||||| | || ||||||||||||||||||||||||| ||||||
Sbjct 410 TGTAACGCCTGTGCTAGA--C-CC---ACCGATGATGTCGATCCCAGAGATAGCGGCGAA 463
Query 482 TTCGGTGATAAAAACATCCGTAGCCACCGTAAGGTTATCACCAGCGATCCTTACGTCACC 541
||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 464 GTCGGTGATAGAAACATCCGTAGCCACCGTAAGGTTATCACCAGCGATCCGTACGTCACC 523
Query 542 GTCGTCGTTCCTCAAGCGACTCTAGCTCGAACACGTGTTTTGAAAAACTCACAAGAGCCT 601
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 524 GTCGTCGTTCCTCAAGCCACTCTAGCTCGAACACGTGTTTTGAAAAACTCACAAGATCCT 583
Query 602 CTTTGGGACGAGAAATTCAACATTTCTATAGCGCATCCGTTTGCTTATCTCGAGTTCCAG 661
|||||||||||| | |||||||| || ||||||||||||| ||||||||||||||||||
Sbjct 584 CTTTGGGACGAGCATTTCAACATCTCCGTAGCGCATCCGTTGGCTTATCTCGAGTTCCAG 643
Query 662 GTCAAAGACGACGATGTTTTCGGTGCTCAAATCATTGGCACGGCTAAGATCCCGGTTCGA 721
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 644 GTCAAAGACGACGATGTTTTCGGTGCTCAAATCATTGGCACGGCTAAGATCCCGGTTCGT 703
Query 722 GACATCGCATCGGGAGAACGCATTTCTGGTTGGTTTCCTGTACTCGGTGCTTCGGGAAAA 781
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 704 GACATCGCATCGGGAGAACGCATTTCTGGTTGGTTTCCTGTACTCGGTACTTCGGGAAAA 763
Query 782 CCGCCTAAGGCAGAAACTGCTATTTTCATCGATATGAAATTTACTCCGTTTGACCAGATC 841
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 764 CCGCCTAAGGCAGAAACTGCTCTTTTCATCGATATGAAATTTACTCCGTTTGACCAGATC 823
Query 842 CATAGCTACCGATGTGGAATCGCCGGAGATCCGGAGCGTAGGGGTGTTAGACGGACTTAT 901
||||| ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||
Sbjct 824 CATAGTTACCGATGTGGAATCGCCGGAGATCCGGACCGTAAAGGTGTTAAACGGACTTAT 883
Query 902 TTCCCTGTGAGGAAAGGAAGTCAGGTGAGGCTTTACCAGGACGCTCATGTTATGGACGGA 961
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 884 TTCCCTGTGAGGAAAGGAAGTCAGGTGAGGCTTTACCAGGACGCTCATGTTATGGACGGA 943
Query 962 ACGTTGCCGGCGATTGGGTTAGATAACGGGAAAGTTTATGAGCATGGGAAGTGTTGGGAA 1021
| |||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 944 ATGTTGCCGGAGATTGGGTTAGATAACGGGAAAGTTTATCAGCATGGAAAGTGTTGGGAA 1003
Query 1022 GATATATGTTATGCTATATCTGAGGCTCACCATATGATTTACATTGTTGGTTGGTCTATC 1081
||||||||||||||| ||||||||||||| |||||||||||| |||||||||||||| ||
Sbjct 1004 GATATATGTTATGCTGTATCTGAGGCTCATCATATGATTTACGTTGTTGGTTGGTCTGTC 1063
Query 1082 TTCCATAAGATTAAGCTTGTTAGGGAA---ACAA--AAGTT-CCAAGAGATAAG-GATAT 1134
||||||||||||||||||||||||||| |||| || || ||||||| | | ||| |
Sbjct 1064 TTCCATAAGATTAAGCTTGTTAGGGAACCTACAAGGAAATTACCAAGAGGT-GGTGATTT 1122
Query 1135 GACGCTTGGGGAATTGCTCAAATACAAATCCCAGGAAGGTGTTCGAGTTTTGCTACTTGT 1194
|||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct 1123 GACGCTTGGGGAATTGCTCAAATACAAATCAGAGGAAGGTGTTCGAGTTTTGCTTCTTGT 1182
Query 1195 ATGGGATGATAAGACTTCTCATGATAAGTTTGGGATAAAAACGCCTGGAGTTATGGGGAC 1254
||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 1183 ATGGGATGATAAGACTTCTCATGATAAATTTGGGATAAGCACGCCTGGAGTTATGGGGAC 1242
Query 1255 ACATGATGAGGAGACTAGGAAGTTCTTCAAGCATTCTTCTGTGATATGCGTTTTGTCACC 1314
||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1243 ACATGATGAAGAGACTAGGAAGTTCTTCAAGCATTCTTCTGTGATTTGCGTATTGTCACC 1302
Query 1315 CCGGTATGCCAGCAGTAAGCTTGGGTTGTTCAAACAACAGGCAAGTCCTAGCTCTTCTAT 1374
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 1303 CCGGTATGCCAGCAGTAAGCTTGGGTTGTTCAAACAACAGGCAAGTCCTATCTTTTCTAT 1362
Query 1375 ATATA---TCATGACAGTTGTTGGAACTCTCTTCACGCACCATCAAAAGTGTGTTCTTGT 1431
||||| |||||||||||||||| |||||||| || |||||||||||||||||||||||
Sbjct 1363 ATATATGGTCATGACAGTTGTTGGCACTCTCTTTACACACCATCAAAAGTGTGTTCTTGT 1422
Query 1432 AGACACTCAGGCTGTTGGTAATAATCGCAAGGTCACCGCTTTTATTGGAGGTCTAGATCT 1491
|||||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||
Sbjct 1423 AGACACTCAGGCTGTTGGGAATAATCGCAAGGTCACAGCTTTTATTGGAGGTATAGATCT 1482
Query 1492 TTGTGATGGCCGTTATGACACACCTGAGCATAGGATACTCCACGATCTTGACACTGTATT 1551
|||||||||||| ||||||||||||||||||||||||||| | || ||||||||||||||
Sbjct 1483 TTGTGATGGCCGCTATGACACACCTGAGCATAGGATACTCAAGGACCTTGACACTGTATT 1542
Query 1552 TAAGGATGATTTCCACAATCCTACATTTCCAGCTGGTACCAAGGCCCCAAGACAACCTTG 1611
|||||||||||| ||||| ||||||||||| |||||||| ||||| ||||||||||||||
Sbjct 1543 TAAGGATGATTTTCACAACCCTACATTTCCTGCTGGTACTAAGGCTCCAAGACAACCTTG 1602
Query 1612 GCACGATTTGCACTGTAGGATAGATGGGCCTGCGGCATATGATGTTCTCATAAACTTTGA 1671
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1603 GCATGATTTGCACTGTAGGATAGATGGGCCTGCGGCATATGATGTTCTCATAAACTTTGA 1662
Query 1672 GCAGCGATGGAGAAAGGCAACACGATGGAAGGAGTTTAGCTTACGTTTAAAGGGGAAAAC 1731
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1663 GCAGCGATGGAGAAAGGCAACACGATGGAAAGAGTTTAGCTTACGTTTAAAGGGGAAAAC 1722
Query 1732 TCACTGGCAAGATGATGCTTTGATCCGGATAGGGCGTATATCATGGATTCTGAGTCCAGT 1791
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct 1723 TCACTGGCAAGATGATGCTTTGATCCGGATAGGGCGCATATCATGGATTCTAAGTCCAGT 1782
Query 1792 GTTTAAATTTCTGAAGGATGGTACTTCGATAATTCCAGAGGACGATCCATGTGTTTGGGT 1851
||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||
Sbjct 1783 GTTTAAATTTCTGAAGGATGGTACTACAATTATTCCAGAGGACGATCCATGTGTTTGGGT 1842
Query 1852 TTCTAAAGAAGATGATCCAGAGAACTGGCATGTTCAGATATTCCGTTCTATCGACTCAGG 1911
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 1843 TTCTAAAGAAGATGATCCTGAGAACTGGCATGTTCAGATATTCCGGTCTATCGACTCAGG 1902
Query 1912 ATCCGTGAAAGGATTTCCAAAATATGAAGATGAGGCTGAGGCCCAGCATCTGGAATGTGC 1971
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1903 ATCCGTGAAAGGATTTCCAAAGTATGAAGATGAGGCTGAGGCCCAGCATCTGGAATGTGC 1962
Query 1972 CAAGCGTCTTGTTGTAGATAAAAGCATCCAGACTGCATACATCCAGACAATCAGATCTGC 2031
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1963 CAAGCGTCTAGTTGTAGATAAAAGCATCCAGACTGCATACATCCAGACAATCAGATCTGC 2022
Query 2032 TCAGCATTTCATATATATCGAGAATCAGTATTTCCTGGGTTCTTCTTATGCTTGGCCTTC 2091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2023 TCAGCATTTCATATATATCGAGAATCAGTATTTCCTGGGTTCTTCTTATGCTTGGCCTTC 2082
Query 2092 TTATAGAGACGCAGGAGCTGACAATCTTATTCCTATGGAGTTGGCACTAAAGATTGTTAG 2151
|||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2083 GTATAGAGATGCAGGAGCTGACAATCTTATTCCTATGGAGTTGGCTCTAAAGATTGTTAG 2142
Query 2152 CAAAATCAGAGCTAAGGAAAGATTTGCCGTATATGTTGTCATACCATTGTGGCCTGAAGG 2211
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 2143 TAAAATCAGAGCTAAGGAAAGATTTGCTGTATATGTTGTCATACCATTATGGCCTGAAGG 2202
Query 2212 CGACCCAAAGTCTGGCCCTGTGCAAGAAATTCTATATTGGCAGAGCCAAACTATGCAGAT 2271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2203 CGACCCAAAGTCTGGCCCTGTGCAAGAAATTCTATATTGGCAGAGCCAAACTATGCAGAT 2262
Query 2272 GATGTATGATGTTATAGCAAAAGAACTGAAAGCGGTGCAATCAGATGCTCATCCTCTCGA 2331
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 2263 GATGTATGATGTTATAGCAAAAGAACTGAAAGCGGTGCAATCAGATGCTCATCCGCTCGA 2322
Query 2332 TTACCTTAACTTTTACTGCCTTGGTAAACGAGAGCAGCTTCCAGATGATATGCCAGCCAC 2391
||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||
Sbjct 2323 TTACCTTAACTTTTATTGCCTTGGTAAACGAGAGCAACCTCCAGATGATATGCCAGCCAC 2382
Query 2392 CAATGGCAGTGTGGTATCAGATTCTTATAATTTCCAGCGTTTCATGATTTACGTGCACGC 2451
|||||||| ||||||||| ||||||||||| |||| ||||||||||||||||||||||||
Sbjct 2383 CAATGGCAATGTGGTATCGGATTCTTATAAGTTCCGGCGTTTCATGATTTACGTGCACGC 2442
Query 2452 AAAAGGGATGATAGTAGATGATGAGTATGTACTCATGGGATCTGCTAATATCAACCAAAG 2511
||| |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2443 AAAGGGGATGGTAGTAGATGATGAGTATGTGCTCATGGGATCTGCTAATATCAACCAAAG 2502
Query 2512 ATCTATGGCAGGCACCAAAGATACTGAAATCGCCATGGGCGCATACCAACCTAATCATAC 2571
||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2503 ATCTATGGCGGGCACCAAAGATACTGAAATCGCCATGGGCTCATACCAACCTAATCATAC 2562
Query 2572 ATGGGCTCACAAGGGAAGACACCCACGTGGCCAGGTGTATGGATACAGAATGTCACTATG 2631
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2563 ATGGGCTCACAAGGGAAAACACCCACGTGGCCAGGTGTATGGATACAGAATGTCACTATG 2622
Query 2632 GGCAGAGCATTTAGGCAAAACTGGAGATGAGTTTGTGGAGCCATCAGATCTGGAATGTCT 2691
||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||| |
Sbjct 2623 GGCAGAGCATTTAGGCAAAACGGGAGATGAATTTGTGGAGCCAGCAGATCTGGAATGTGT 2682
Query 2692 GAAGAAGGTGAACACAATCTCTGAAGAAAACTGGAAAAGATTCATAGACCCGAAATTCTC 2751
|||||| ||||||| ||||||||||| ||||||||||| |||||||||| ||||||||||
Sbjct 2683 GAAGAACGTGAACAAAATCTCTGAAGGAAACTGGAAAAAATTCATAGACTCGAAATTCTC 2742
Query 2752 AGAGCTACAAGGTCACTTAATAAAGTATCCTCTACAAGTAGACGTTGATGGTAAAGTAAG 2811
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 2743 GGAGCTACAAGGTCACTTAATAAAGTATCCTCTACAAGTGGATGTTGATGGTAAAGTAAG 2802
Query 2812 CCCTCTTCCTGATTACGAGACCTTCCCAGATGTTGGTGGTAAGATCATTGGAGCTCATTC 2871
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2803 CCCTCTTCCTGATTACGAGAGTTTCCCAGATGTTGGTGGTAAGATCATTGGAGCTCATTC 2862
Query 2872 CATGGCTCTTCCTGACACTTTAACCACGTAATGTG-A--ATGTTCAATGTAAATTTCAGC 2928
|||||||||||||||||||||||||||||||||| | ||||| |||||||||||||||
Sbjct 2863 CATGGCTCTTCCTGACACTTTAACCACGTAATGTTCATCATGTTTAATGTAAATTTCAGC 2922
Query 2929 ATTTGTTTTGGGGTTTCTTTTGATCCTGAATAATATTAGCTGAAAGTGTTGTTTGAGTTG 2988
|||| ||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2923 ATTT-TTT-GGG-TTTCTTTTGATCCTGAATAATAT-AGCTGAAAGTGTTGTTTGAGTTG 2978
Query 2989 TTGTACATTTAACTGTGTTGTTTCTTTTTTATACATTCTTTTGTGATTGTCGTCAAATAT 3048
| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2979 T---ACATTTAACTGTGTTGTTTCTTTTA-ATACATTCTTTTGTGATTGTCGTCAAATAT 3034
Query 3049 TTGTTGGGGTGCAAAATGTAGAGATCGTGAGTGAGTGAAGAGGCAAAATAATTTGAGGAT 3108
||||| |||| ||||||||||||||||||||||||||||||||||| |||| |||| ||
Sbjct 3035 ATGTTGAGGTGAAAAATGTAGAGATCGTGAGTGAGTGAAGAGGCAAAGTAATATGAGAAT 3094
Query 3109 ATTCTATTTTTCTCGGTTTTCTT-TTTCAAAATCGGATAATGATG 3152
||||| ||||||||| |||| || ||||||| ||| || ||||||
Sbjct 3095 ATTCTGTTTTTCTCGTTTTT-TTCTTTCAAATTCGAATGATGATG 3138
> Ahg933838 jgi|Araly1|933838|scaffold_401826.1
Length=298
Score = 226 bits (122), Expect = 8e-58
Identities = 219/262 (84%), Gaps = 22/262 (8%)
Strand=Plus/Plus
Query 1388 GTTGTTGG-A-ACTCTCTTCACGCACCATCAAAAGTGTGTTCTTGTAGACACTCAGGCTG 1445
|||||||| | ||||||||| ||||||||||||||||||||||||||||||||| | ||
Sbjct 55 GTTGTTGGCATTCTCTCTTCATGCACCATCAAAAGTGTGTTCTTGTAGACACTCATGATG 114
Query 1446 TTGGTAATAA-TCGCAAGGTCACCGCTTTTATTGGAGGTCTAGATCTTTGTGATGGCCGT 1504
|||||||||| | | |||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 115 TTGGTAATAACT-GTAAGGTCACAGCTTTTATTGGAGGTATAGATCTTTGTGATGGCCGC 173
Query 1505 TATGACACACCTGAGCATAGGATACTCCACGATCTTGACACTGTATTTAAGGATGATTTC 1564
|||||||||||||| | | | | | || | | ||| || |||||||||||
Sbjct 174 TATGACACACCTGATCTT-G-A-A----AC--T---G----TGT-TT-AAGGATGATTTT 215
Query 1565 CACAATCCTACATTTCCAGCTGGTACCAAGGCCCCAAGACAACCTTGGCACGATTTGCAC 1624
||||||||||||||||| |||||||| |||| |||| ||| |||||||| |||||||||
Sbjct 216 CACAATCCTACATTTCCTGCTGGTACTAAGGATCCAAAACAGCCTTGGCATGATTTGCAC 275
Query 1625 TGTAGGATAGATGGGCCTGCGG 1646
|| | ||||||||||| |||||
Sbjct 276 TGAATGATAGATGGGCATGCGG 297
> Ahg928800 jgi|Araly1|928800|scaffold_301257.1
Length=298
Score = 226 bits (122), Expect = 8e-58
Identities = 219/262 (84%), Gaps = 22/262 (8%)
Strand=Plus/Plus
Query 1388 GTTGTTGG-A-ACTCTCTTCACGCACCATCAAAAGTGTGTTCTTGTAGACACTCAGGCTG 1445
|||||||| | ||||||||| ||||||||||||||||||||||||||||||||| | ||
Sbjct 55 GTTGTTGGCATTCTCTCTTCATGCACCATCAAAAGTGTGTTCTTGTAGACACTCATGATG 114
Query 1446 TTGGTAATAA-TCGCAAGGTCACCGCTTTTATTGGAGGTCTAGATCTTTGTGATGGCCGT 1504
|||||||||| | | |||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 115 TTGGTAATAACT-GTAAGGTCACAGCTTTTATTGGAGGTATAGATCTTTGTGATGGCCGC 173
Query 1505 TATGACACACCTGAGCATAGGATACTCCACGATCTTGACACTGTATTTAAGGATGATTTC 1564
|||||||||||||| | | | | | || | | ||| || |||||||||||
Sbjct 174 TATGACACACCTGATCTT-G-A-A----AC--T---G----TGT-TT-AAGGATGATTTT 215
Query 1565 CACAATCCTACATTTCCAGCTGGTACCAAGGCCCCAAGACAACCTTGGCACGATTTGCAC 1624
||||||||||||||||| |||||||| |||| |||| ||| |||||||| |||||||||
Sbjct 216 CACAATCCTACATTTCCTGCTGGTACTAAGGATCCAAAACAGCCTTGGCATGATTTGCAC 275
Query 1625 TGTAGGATAGATGGGCCTGCGG 1646
|| | ||||||||||| |||||
Sbjct 276 TGAATGATAGATGGGCATGCGG 297
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 119298647340
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5