BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G36290.1
Length=2141
Score E
Sequences producing significant alignments: (Bits) Value
Ahg888428 jgi|Araly1|888428|Al_scaffold_0007_414 2832 0.0
Ahg491004 jgi|Araly1|491004|fgenesh2_kg.7__437__AT4G36280.1 2102 0.0
Ahg944247 jgi|Araly1|944247|scaffold_700476.1 1714 0.0
> Ahg888428 jgi|Araly1|888428|Al_scaffold_0007_414
Length=1896
Score = 2832 bits (1533), Expect = 0.0
Identities = 1787/1910 (94%), Gaps = 16/1910 (1%)
Strand=Plus/Plus
Query 29 ATGGCGAAAAATTACACAGTCGCCGATGTCGTAAATATCGACAGTGACAGTGACAGTGAC 88
|||||| |||| |||||||||||||| |||| ||| || | |||||||||||||||
Sbjct 1 ATGGCG-AAAA--ACACAGTCGCCGATATCGT-AAT-TC-TC---GACAGTGACAGTGAC 51
Query 89 GACGACAACGGAGGAGTAATAGGAATGGTTCCG-AGCTTGGCATCTCTAATAGAGAATCA 147
|||||| |||||||| ||||||||||| | || |||||| ||||||| || ||||||||
Sbjct 52 GACGACGTCGGAGGAGGAATAGGAATGGGT-CGAAGCTTGACATCTCTTATGGAGAATCA 110
Query 148 GAAAGTTTCGATCGCTGATGCTGCGACGGTGGCTCCTCGAGAAACCCTAGAGTGCCGAAG 207
| ||||||||| ||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct 111 GCAAGTTTCGAACGCTGATGCTGCGACGGTGGCTCCTCGAGAAACCCTAGAATGTCGGAG 170
Query 208 TTTCTGGAAAGCCGGCGAAAACTTTGTGATCCCTTCAAGTGTTACTCTAACTGC-CATAG 266
|||||||||||||||||||||||||||||||||||| ||||||||| |||||| | ||
Sbjct 171 TTTCTGGAAAGCCGGCGAAAACTTTGTGATCCCTTCCGGTGTTACTCCAACTGCTC-CAG 229
Query 267 GTATGGTTGAGCATGCTCGTGTTCATCCAAAGTTTCTTCACTCGAATGCTACTTCACATA 326
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 230 GTATGGTTGAGCATGCTCGTGTTCATCCAAAGTTTCTTCACTCGAATGCTACTTCACATA 289
Query 327 AATGGGCTTTTGGAGCAATCGCCGAGCTACTTGACAATGCGGTTGATGAGATACAAAACG 386
|||||||||||||||||||||| ||||||||||||||||||||||| ||| | |||||||
Sbjct 290 AATGGGCTTTTGGAGCAATCGCAGAGCTACTTGACAATGCGGTTGACGAGGTCCAAAACG 349
Query 387 GTGCTACCGTTGTCAAGATTGATAAGATCAATATTGTTAAAGATAATACACCTGCCTTAG 446
| || ||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 350 GAGCCACCTTTGTCAAGATTGATAAGATCAATATTGTTAAAGATAATACCCCTGCTTTAG 409
Query 447 TTTTCCAAGATAATGGTGGTGGGATGGATCCTAATGGGATCAGAAAATGCATGAGCTTAG 506
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 410 TTTTCCAAGATAATGGTGGTGGGATGGATCCCAATGGGATCAGAAAATGCATGAGCTTAG 469
Query 507 GCTACTCGTCAAAGAAGTCTAATACGACAATTGGACAATATGGAAATGGTTTCAAGACAA 566
|||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||| |
Sbjct 470 GCTACTCGTCAAAGAAGTCTAATACGACGATTGGACAGTATGGAAATGGTTTTAAGACGA 529
Query 567 GTACAATGAGACTTGGAGCTGATGCCATGGTTTTTAGTCGCTCAACTCGTGGAGGCAAAT 626
|||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct 530 GTACCATGAGACTTGGAGCTGATGCCATCGTGTTTAGTCGCTCAACTCGTGGAGGCAAAT 589
Query 627 CTACACAGAGCATTGGTCTTCTGTCCTATACATTCCTTAGGAAAACTGGTCAGGATGATG 686
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 590 CTACACAGAGCATTGGTCTTCTGTCTTACACATTCCTTAGGAAAACTGGTCAGGATGATG 649
Query 687 TGATCGTTCCTATGATTGATTTCGATATATCCAGTGATAGCCCCCAACCAATTATTTATG 746
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 650 TGATCGTTCCTATGATTGATTTCGATATATCCAGTGTTAGGCCCCAACCAATTATTTATG 709
Query 747 GGTCTCCCGGAGATTGGTCTACCAACCTTAACATTCTTCTCAAATGGTCCCCGTTTTCAA 806
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 710 GGTCTCCCGGAGATTGGTCTACCAACCTTAACATTCTTCTCAAATGGTCCCCGTTTCCAA 769
Query 807 CAATGGTCGAACTTTTGCAGCAGTTCGAGGATATTGGAACACATGGAACAAAAGTAATTA 866
| |||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 770 CTATGGACGAACTTTTGCAGCAGTTCGAGGATATTGGAACTCACGGAACAAAAGTAATTA 829
Query 867 TATACAACTTGTGGCTTAATGATGAAGGAATCTATGAGCTGAGTTTTGACGACGATGATG 926
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 830 TATACAACTTGTGGCTTAATGATGAAGGAATCTATGAATTGAGTTTTGACGACGATGATG 889
Query 927 TGGATATACGGCTCCGAGATGAAAATGCCCAGGACGGGAAACGGTTGCACGCTAAAACAT 986
||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||
Sbjct 890 AGGATATACGGCTCCGAGATGAGAATGCCCAGGATGGGAAACGGTTGTACGCTAAAACAT 949
Query 987 TGGAAGTAAGATCTCATATTTCGTACCGCTATCGACATTCTCTAAGGGCTTACATTTCCA 1046
||||| |||||||||||||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct 950 TGGAACTAAGATCTCATATTTCATACCGCTATCGACATTCGCTAAGGGCCTACATTTCCA 1009
Query 1047 TGTTATATCTCAAAAAGTTCAAAAACTTCAAAATTATTCTTCGGGGAGTCTCTGTGGCGC 1106
|| |||||||||| ||||||||||||||||||||||||||||||||| || |||||| ||
Sbjct 1010 TGCTATATCTCAAGAAGTTCAAAAACTTCAAAATTATTCTTCGGGGAATCCCTGTGGAGC 1069
Query 1107 AATTCAACATTGCTGATGAATTCAGACATCCTGAGACAATAATGTACAAACCCCAAGCAG 1166
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1070 AATTCAACATTGCTGATGAATTCAGACATCCTGAGATAATAATGTACAAACCCCAAGCAG 1129
Query 1167 CTGCAGTGGATTATGCTGCCACTGGAATTAAAGTTGGATTCATCAAGGAGGCCCCTAAAC 1226
||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1130 CTGCAATGGAATATGCTGCCACTGGAATTAAAGTTGGATTCATCAAGGAGGCGCCTAAAC 1189
Query 1227 TTCCAATTTGTGGTTTCAATGTCTATCACAAAAACCGTCTCATCCGGCCATTCTGGAAGG 1286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1190 TTCCAATTTGTGGTTTCAATGTCTATCACAAAAACCGTCTCATCCGGCCATTCTGGAAGG 1249
Query 1287 TCGTTCTGGAAGGGTCAACGAGAGGCAATGGTGTTATGGGAGTTCTTGAGGCAAACTTCA 1346
||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct 1250 TCGTTCTGGAAGGATCAACGAGAGGCAATGGTGTTGTGGGAGTTCTTGAAGCAAACTTCA 1309
Query 1347 TAGAACCAGCCCACGACAAGCAAGATTTTGAGAGGTCTTCTCTATTTCTGCGGCTGGAGG 1406
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1310 TAGAACCAGCCCACGATAAGCAAGATTTTGAGAGATCTTCTCTATTTCTGCGGCTGGAGG 1369
Query 1407 CGAGGCTGAAAAGGATAACCTCTGATTACTGGCAAAATCACTGTCACATTTTCGGATACC 1466
||||||||||||||| | ||||||||||||||||| ||||| ||| ||||||||||||
Sbjct 1370 GGAGGCTGAAAAGGATTATCTCTGATTACTGGCAAAGCCACTGCCACGTTTTCGGATACC 1429
Query 1467 AAACTGCTCAAATCCCTGCAGATAAGTCGAAAAGGACAGTAATACCTGATCAACCGCCTA 1526
|||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||||
Sbjct 1430 AAACTGGTCAAATCCCTGCAGATAGGTCGAAAAGGATAGCAATACCTGATCAACCGCCTA 1489
Query 1527 CTGTCAATACATACAATCCTTCGCCTTTGCCTTCTGATAGAATCAGTCATGGTGGTCCTA 1586
|||||| ||||| |||||||||||||||||||||||||| ||| ||||| || |||||||
Sbjct 1490 CTGTCAGTACATTCAATCCTTCGCCTTTGCCTTCTGATAAAATTAGTCAAGGCGGTCCTA 1549
Query 1587 TAATACGTGAAATCAATCTTAGTAACGCCACTTCAAGCCGAACAGCTGCTGTTGCCGCGC 1646
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||| || |
Sbjct 1550 TAATACGTGAAATCAATCTTAGTAACGCCACTTCAAGCCGTACAGTTGCTGTTGCAGCAC 1609
Query 1647 CACATTTGAGAAATTACACAGGTTTAAGAAATAACTTCCAACCCGTGCAGCTCAACCCAC 1706
| ||||||||||||| ||| |||||||||| |||||||||||||||||||||||||||||
Sbjct 1610 CGCATTTGAGAAATTCCACGGGTTTAAGAAGTAACTTCCAACCCGTGCAGCTCAACCCAC 1669
Query 1707 AACCACCTGCAGCTGGCGATACTGGAAACAACCTCGTTGGCAAGTTAGCGGCTGAGATAC 1766
|||| |||||||| |||||||||||||||| |||||||||||| ||| | |||||||
Sbjct 1670 AACC---TGCAGCTGCCGATACTGGAAACAACATCGTTGGCAAGTCAGCTGATGAGATAA 1726
Query 1767 GCGAAGAGAACTTACAACTCTTCATGAGGTGCGAGGAATATGTAAAGAAAGAGAATGAAG 1826
| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1727 GGGAAGAGAACATACAACTCTTCATGAGGTGCGAGGAATATATAAAGAAAGAGAATGAAA 1786
Query 1827 TAGAACAGACGGTAAAGAGCTTAGAAAAAGAACTGGAAGAAATTAAAAGTAAATGTGCAC 1886
|||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct 1787 TAGAACAGACGGTAAAGAGCTTAGAAAAGGAACTGGAAGAAGTTAAAAGTAAATGTGCAC 1846
Query 1887 AACTTGCTCTGCTTGTGGATGCTAAGAAGAAGGAGATGCAACAAGTTTAG 1936
|||||||| |||||||||| ||||||||||||||||||||||||||||||
Sbjct 1847 AACTTGCTTTGCTTGTGGACGCTAAGAAGAAGGAGATGCAACAAGTTTAG 1896
> Ahg491004 jgi|Araly1|491004|fgenesh2_kg.7__437__AT4G36280.1
Length=1950
Score = 2102 bits (1138), Expect = 0.0
Identities = 1636/1873 (87%), Gaps = 48/1873 (3%)
Strand=Plus/Plus
Query 139 AGAGAATCAGAAAGTTTCGATCGCTGATGCTGCGACGGTGGCTCCTCGAGAAACCCTAGA 198
|||||||||| ||| | | ||||||||||||||||||||||||||| | | ||
Sbjct 107 AGAGAATCAGCAAG-TACAATCGCTGATGCTGCGACGGTGGCTCCT------A--C-GGA 156
Query 199 GTGCCGAAG-TTTCTGGAAAGCCGGCGAAAACTTTGTGAT-CCCTTCAAG-TGTTACTCT 255
||||| || ||| ||||||||||| |||||||||||||| || || | ||| ||||
Sbjct 157 ATGCCGGAGCTTT-TGGAAAGCCGGAGAAAACTTTGTGATACCGATC--GTTGTGACTCC 213
Query 256 AACTGC-CATAGGTATGGTTGAGCATGCTCGTGTTCATCCAAAGTTTCTTCACTCGAATG 314
||| | | |||| || ||||||||||||| |||||||| | |||||||||||||||||
Sbjct 214 GACTTCTC-CAGGTTTGCTTGAGCATGCTCGAGTTCATCCCAGGTTTCTTCACTCGAATG 272
Query 315 CTACTTCACATAAATGGGCTTTTGGAGCAATCGCCGAGCTACTTGACAATGCGGTTGATG 374
|||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |
Sbjct 273 CTACTTCACACAAATGGGCTTTTGGAGCAATCGCTGAGCTACTTGACAATGCTGTTGACG 332
Query 375 AGATACAAAACGGTGCTACCG-TTGTCAAGATTGATAAGATCAATATTGTTAAAGATAAT 433
|||||||||| ||||||| || |||| ||||||||||||||||||||||| |||||||||
Sbjct 333 AGATACAAAATGGTGCTA-CGTTTGTTAAGATTGATAAGATCAATATTGTCAAAGATAAT 391
Query 434 ACACCTGCCTTAGTTTTCCAAGATAATGGTGGTGGGATGGATCCTAATGGGATCAGAAAA 493
| || || ||| ||||||||||| |||| |||||||||||||| |||| ||||||||
Sbjct 392 TCCCCAGCTTTACTTTTCCAAGATGATGGCGGTGGGATGGATCCCGCTGGGCTCAGAAAA 451
Query 494 TGCATGAGCTTAGGCTACTCGTCAAAGAAGTCTAATACGACAATTGGACAATATGGAAAT 553
|||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||
Sbjct 452 TGCATGAGCTTAGGCTACTCATCAAAGAAGTCTAATACAACAATTGGACAGTATGGAAAT 511
Query 554 GGTTTCAAGACAAGTACAATGAGACTTGGAGCTGATGCCATGGTTTTTAGTCGCTCAACT 613
|||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 512 GGTTTCAAAACAAGTACCATGAGACTTGGAGCTGATGCCATTGTTTTTAGTCGCTCAACT 571
Query 614 CGTGGAGGCAAATCTACACAGAGCATTGGTCTTCTGTCCTATACATTCCTTAGGAAAACT 673
|||||||||| |||||| ||||| ||||||||||||| || |||||||| || ||||||
Sbjct 572 CGTGGAGGCACATCTACTCAGAGTGTTGGTCTTCTGTCATACACATTCCTCAGAAAAACT 631
Query 674 GGTCAGGATGATGTGATCGTTCCTATGATTGATTTCGATATATCC-AGTGATAGCCCCCA 732
|||||||||||||| || ||||||||||||||||| ||||||||| || || | || ||
Sbjct 632 GGTCAGGATGATGTCATTGTTCCTATGATTGATTTTGATATATCCAAG-GAGCGACCACA 690
Query 733 ACCAATTATTTATGGGTCTCCCGGAGATTGGTCTACCAACCTT-AACATTCTTCTCAAAT 791
||||||||| ||||| |||| | ||||||| || |||||||| || ||||| |||||||
Sbjct 691 ACCAATTATCTATGGATCTCAAGAAGATTGGGCTGCCAACCTTGAA-ATTCTACTCAAAT 749
Query 792 GGTCCCCGTTTTCAACA-ATGGTCGAACTTTT---GCAGCAGTTCGAGGATATTGGAACA 847
|||| |||||||| ||| | | ||||||||| |||||||||||||| |||||||
Sbjct 750 GGTCTCCGTTTTCTACAGA-AGACGAACTTTTACAACAGCAGTTCGAGGACGTTGGAACT 808
Query 848 CATGGAACAAAAGTAATTATATACAACTTGTGGCTTAATGATGAAGGAATCTATGAGCTG 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 809 CATGGAACAAAAGTAATTATATACAACTTGTGGCTTAATGATGAAGGAATCTATGAGCTG 868
Query 908 AGTTTTGACGACGATGATGTGGATATACGGCTCCGAGATGAAAATGCCCAGGACGGGAAA 967
|||||||||||||| || | ||| || |||||||||||||||| || | | ||||| |||
Sbjct 869 AGTTTTGACGACGACGACGAGGACATCCGGCTCCGAGATGAAAGTGTCAATGACGGTAAA 928
Query 968 CGGTTGCACGC-TAAAACATTGGAAGTAAGATCTCATATTTCGTACCGC-TATCGACATT 1025
||||||||| | ||| ||||||| | |||||||||||||| |||| | || || | |
Sbjct 929 CGGTTGCAC-CATAAGTTATTGGAACTGAGATCTCATATTTCATACCACTTA-CGTTACT 986
Query 1026 CTCTAAGGGCTTACATTTCCATGTTATATCTCAAAAAGTTCAAAAACTTCAAAATTATTC 1085
|||| |||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 987 CTCTGAGGGCTTATGCTTCAATGTTATATCTCAAAAAGTTCAAAAACTTCAAAATTATAA 1046
Query 1086 TTCGGGGAGTCTCTGTGGCGCAATTCAACATTGCTGATGAATTCAGACATCCT-GAGACA 1144
|||||||| || |||||| ||| |||||||||||||||||||| ||| | || ||||
Sbjct 1047 TTCGGGGAATCCCTGTGGAGCAGTTCAACATTGCTGATGAATTTAGA-TTTCTCGAGATT 1105
Query 1145 ATAATGTACAAACCCCA-AGCAGCTGCAGTGGATTATGCTGCCACTGGAATTAAAGTTGG 1203
|||| |||||| ||||| | ||||| || |||| | ||| |||||| ||| ||||||||
Sbjct 1106 ATAAAGTACAAGCCCCATA-CAGCTACAATGGAACAAGCTTCCACTGAAATCAAAGTTGG 1164
Query 1204 ATTCATCAAGGAGGCCCCTAAACTTCCAATTTGTGGTTTCAATGTCTATCACAAAAACCG 1263
||| | |||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||
Sbjct 1165 ATTTGTAAAGGAGGCGCCTAAGCTTGCAATTTGCGGTTTCAATGTCTATCACAAAAACCG 1224
Query 1264 TCTCATCCGGCCATTCTGGAAGGTCGTTCT-GGAAGGGTCAACGAGAGGCAATGGTGTTA 1322
|||||||||||| |||||||||||| | | ||| ||| | ||| |||||||||||||
Sbjct 1225 TCTCATCCGGCCTTTCTGGAAGGTCACTATGGGAGGGGAC-TCGACAGGCAATGGTGTTG 1283
Query 1323 TGGGAGTTCTTGAGGCAAACTTCATAGAACCAGCCCACGACAAGCAAGATTTTGAGAGGT 1382
||||||||||||| ||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct 1284 TGGGAGTTCTTGAAGCAAACTTCATAGAACCAGCCCATGATAAGCAAGATTTTGAAAGGT 1343
Query 1383 CTTCTCTATTTCTGCGGCTGGAGGCGAGGCTGAAAAGGATAACCTCTGA-TTACTGGCAA 1441
|||||||||||| |||||||||||||||| |||||| ||| || | | ||||||| |
Sbjct 1344 CTTCTCTATTTCAGCGGCTGGAGGCGAGGTTGAAAAAGATTGTCTAT-AGTTACTGGTAT 1402
Query 1442 AATCACTGTCACATTTTCGGATACCAAACTGCTCAAATCCCTGCAGATAAGTCGAAAAGG 1501
| ||||| ||| |||| |||||||| ||| |||||| ||||||||||||||||||| |
Sbjct 1403 ACCCACTGCCACGTTTTTGGATACCATACTTATCAAATGCCTGCAGATAAGTCGAAAAAG 1462
Query 1502 ACAGTAATACCTGATCAACCGCCTACTGTCAATACATACAATCCTTCGCCTTTGCCTTCT 1561
| || |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 1463 ATAGCAATACCTGATCAACTGCCTACTGTCAATACATTCAATCCTTCGCCTTTGCCTTCT 1522
Query 1562 GATAGAATCAGTCATGGTGGTCCTATAATACGTGAAATCAATCTTAGTAACGCCACTTCA 1621
|||| ||| ||||| ||||||||||| |||| ||||||||||||||||||||||||||||
Sbjct 1523 GATAAAATAAGTCAAGGTGGTCCTATCATACATGAAATCAATCTTAGTAACGCCACTTCA 1582
Query 1622 AGCCGAACAGCTGCTGTTGCCGCGCCACATTTGAGAAATTACACAGGTTTAAGAAATAAC 1681
||||| |||| ||||||||| ||||||||| ||||||||| || |||||||||| ||||
Sbjct 1583 AGCCGTACAGTTGCTGTTGCAGCGCCACATATGAGAAATTCCATGGGTTTAAGAAGTAAC 1642
Query 1682 TTCCAACCCGTGCAGCTCAACCCACAACCACCTGCAGCTGGC-GATACTGGAAACAACCT 1740
|||||||| |||||||||||||||| | |||||| ||| || ||||||||||||| |||
Sbjct 1643 TTCCAACCTGTGCAGCTCAACCCAC-A--ACCTGCGGCT-GCTGATACTGGAAACACCCT 1698
Query 1741 CGTTGGCAAGTTAGCGGCTGAGATAC-GCGAAGAGAACTTACAACTCTTCATGAGGTGCG 1799
||||||||||| |||| |||||| | ||||||||||||| | |||||||||||||||||
Sbjct 1699 CGTTGGCAAGTCCGCGGGTGAGAT-CAGCGAAGAGAACTTGCGACTCTTCATGAGGTGCG 1757
Query 1800 AGGAATATGTAAAGAAAGAGAATGAAGTAGAACAGACGGTAAAGAGCTTAGAAAAAGAAC 1859
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1758 AGGAATATATAAAGAAAGAGAATGAAATAGAACAGACGGTAAAGAGCTTAGAAAAAGAAC 1817
Query 1860 TGGAAGAAATTAAAAGTAAATGTGCACAACTTGCTCTGCTTGTGGATGCTAAGAAGAAGG 1919
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1818 TGGAAGAAGTTAAAAGTAAATGTGCACAACTTGCTCTGCTTGTGGATGCTAAGAAGAAGG 1877
Query 1920 AGATGCAACAAGTTTAGTAAAAGCGTTACGAGTTAAAACTCTCTGGAACCTAAAAAACCC 1979
|||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 1878 AGATGCAACAAGTTTAGTAAAAGCGTTACGAGTTAAAACTCTCTGGAATCTAAAGAACCC 1937
Query 1980 TAGTTTGATTCAG 1992
|||||||||||||
Sbjct 1938 TAGTTTGATTCAG 1950
> Ahg944247 jgi|Araly1|944247|scaffold_700476.1
Length=1989
Score = 1714 bits (928), Expect = 0.0
Identities = 1633/1960 (83%), Gaps = 102/1960 (5%)
Strand=Plus/Plus
Query 33 CGAAAAATTAC-ACAGTCGCCGATGTCGTAAATATCGACAGTGACAGTGACAGTGACGAC 91
||||||| | | |||||| | |||||||| || |||||||||||||||||||||||||
Sbjct 36 CGAAAAA-TGCAACAGTCTCTGATGTCGTTTATCTCGACAGTGACAGTGACAGTGACGAT 94
Query 92 GACAACGGAGGAGTAATAGGAATG-GTTCCG-AGCTTGGCATCTCTAATAGAGAATCAGA 149
| | | ||||| || ||| | | || | ||| |||| || ||||| |||||||||
Sbjct 95 G--GA-GTAGGAGGAAGAGG-A-GCTTTTAGAAGCATGGCGTCGCTAATGGAGAATCAGC 149
Query 150 AAGTT-----T-CGATCGCTGATGCTGCGACGGTGGCTCCTCGAGAAACCCTAGAGTGCC 203
||||| | | ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 150 AAGTTCCAAGTACAATCGCTGATGCTGCGACGGTGGCTCCTCGAGAAACCCTAGAATGCC 209
Query 204 GAAGTTTCTGGAAAGCCGGCGAAAACTTTGTGATCCCTTCAA--GTGTTACTCTAACTGC 261
| |||||||||||||||||||||||||||| |||||| | || ||||||| | |||||
Sbjct 210 GGAGTTTCTGGAAAGCCGGCGAAAACTTTGCGATCCC-T-AACGGTGTTACCCCAACTG- 266
Query 262 CAT-AGGTATGGTTGAGCATGCTCGTGTTCATCCAAAGTTTCTTCACTCGAATGCTACTT 320
| | ||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 267 CTTCAGGTATGGTTGAGCATGCTCGAGTACATCCAAAGTTTCTTCACTCGAATGCTACTT 326
Query 321 CACATAAATGGGCTTTTGGAGCAATCGCCGAGCTACTTGACAATGCGGTTGATGAGATAC 380
|||| |||||||||||||||||||||||||| || ||||||||||| ||||| |||||||
Sbjct 327 CACACAAATGGGCTTTTGGAGCAATCGCCGAACTGCTTGACAATGCTGTTGACGAGATAC 386
Query 381 AAAACGGTGCTACCG-TTGTCAAGATTGATAAGATCAATATTGTTAAAGATAATACACCT 439
|||| || |||| || |||| ||||||||||||||| ||||||| ||||||||| | ||
Sbjct 387 AAAATGGCGCTA-CGTTTGTTAAGATTGATAAGATCGATATTGTCAAAGATAATTCTCCA 445
Query 440 GCCTTAGTTTTCCAAGATAATGGTGGTGGGATGGATCCTAATGGGA-TCAGAAAATGCAT 498
|| ||||||||||||||| |||| ||||||||||||||| || ||| |||||||||||||
Sbjct 446 GCTTTAGTTTTCCAAGATGATGGCGGTGGGATGGATCCTGAT-GGACTCAGAAAATGCAT 504
Query 499 GAGCTTAGGCTACTCGTCAAAGAAGTCTAATACGACAATTGGACAATATGGAAATGGTTT 558
||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 505 GAGCTTAGGCTACTCATCAAAGAAGTCTAATACAACAATTGGACAGTATGGAAATGGTTT 564
Query 559 CAAGACAAGTACAATGAGACTTGGAGCTGATGCCATGGTTTTTAGTCGCTCAACTCGTGG 618
|||||||||||| |||||||||||||||||||| || |||||||||||||||| ||||||
Sbjct 565 CAAGACAAGTACCATGAGACTTGGAGCTGATGCTATCGTTTTTAGTCGCTCAAGTCGTGG 624
Query 619 AGGCAAATCTACACAGAGCATTGGTCTTCTGTCCTATACATTCCTTAGGAAAACTGGTCA 678
|||||||||||| |||||| ||||||||||||| || || ||||| || |||||| ||||
Sbjct 625 AGGCAAATCTACTCAGAGCGTTGGTCTTCTGTCTTACACGTTCCTCAGAAAAACTAGTCA 684
Query 679 GGATGATGTGATCGTTCCTATGATTGAT-TTCGATATATCC-AGTGATAGCCCCCAACCA 736
||||||||| || ||||||||||||||| || ||||||||| || || | || ||||||
Sbjct 685 GGATGATGTCATTGTTCCTATGATTGATATT-GATATATCCAAG-GAGCGACCACAACCA 742
Query 737 ATTATTTATGGGTCTCCCGGAGATTGGTCTACCAACCTT-AACATTCTTCTCAAATGGTC 795
||||| ||||| ||||| | ||||||| || |||||||| || ||||| |||||||||||
Sbjct 743 ATTATCTATGGATCTCCAGAAGATTGGGCTGCCAACCTTCAA-ATTCTACTCAAATGGTC 801
Query 796 CCCGTTTTCAACA-ATGG-TCGAACTTTTGCAGCAGTTCGAGGATATTGGAACACATGGA 853
|||||||| ||| | || | ||||||| ||||||||||| ||| |||||||||||||||
Sbjct 802 TCCGTTTTCTACAGA-GGAT-GAACTTTGGCAGCAGTTCGTGGAAATTGGAACACATGGA 859
Query 854 ACAAAAGTAATTATATACAACTTGTGGCTTAATGATGAAGGAATCTATGAGCTGAGTTTT 913
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 860 ACAAAAGTAATTATATACAACTTGTGGCTTAATGATGAAGGAATTTATGAGCTGAGTTTT 919
Query 914 GACGACGAT-GATGTGGATATACGGCTCCGAGATGAAAATGCCCAGGACGGGAAACGGTT 972
|||||||| | || ||| || ||||||| ||||||| || ||| || |||||||||||
Sbjct 920 GACGACGACAG-TGAGGACATCCGGCTCCAAGATGAAGGTGTCCATGATGGGAAACGGTT 978
Query 973 GCACGCTAAAACATTGGAAGTAAGATCTCATATTTCGTACCGCT-ATCGACATTCTCTAA 1031
|| | ||||| ||||||| | ||||||||||| || |||| | | || | ||||| |
Sbjct 979 GCCCCCTAAAGTATTGGAACTGAGATCTCATATATCATACCAATTA-CGTTACTCTCTGA 1037
Query 1032 GGGCTTACATTTCCATGTTATATCTCAAAAAGTTCAAAAACTTCAAAATTATTCTTCGGG 1091
|||||||| ||| |||||||||||| | |||||| |||| ||||||||||| || || |
Sbjct 1038 GGGCTTACGCTTCAATGTTATATCTCGAGAAGTTCGAAAATTTCAAAATTATACTACGAG 1097
Query 1092 GAGTCTCTGTGGCGCAATTCAACATTGCTGATGAATTCAGACAT-CCTGAGACAATAATG 1150
|| || |||||| ||| |||||||||||||||||| ||||| || || ||| |||| |
Sbjct 1098 GAATCCCTGTGGAGCAGTTCAACATTGCTGATGAACTCAGATATTCCA-AGATTATAAAG 1156
Query 1151 TACAAACCCCA-AGCAGCTGC-AGTGGATTATGCTGCCACTGGAATTAAAGTTGGATTCA 1208
||||| ||| | | |||| | | |||| | ||| ||||| ||| ||||||||||| |
Sbjct 1157 TACAAGCCCTATAA-AGCTACTA-TGGAACAAGCTACCACTAAAATCAAAGTTGGATTTA 1214
Query 1209 TCAAGGAGGCCCCTAAACTTCCAATTTGTGGTTTCAATGTCTATCACAAAAACCGTCTCA 1268
| ||||||| ||||| ||| || ||||||||| |||||| ||||| |||||||||||||
Sbjct 1215 TAAAGGAGGGGCCTAAGCTTGCAGTTTGTGGTTACAATGTTTATCATAAAAACCGTCTCA 1274
Query 1269 TCCGGCCATTCTGGAAGGTCGTTCTGGA-AGGGTCAACGAGAGGCAA--TGGTGTTATG- 1324
||||| | | | | || ||| || ||| | | ||| | ||||
Sbjct 1275 TCCGGGTAAA--G-ACC-T-GTA--GGAGAGACTCATT-A-AT-CAAAATC-TGTTCCCC 1323
Query 1325 -GGAGTTCTTGAGGCAAACTTCATAGAACCAGCCCACGACAAGCAAGATTTTGAGAGGTC 1383
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1324 AGGAGTTCTTGAAGCAAACTTCATAGAACCAGCCCACGATAAGCAAGATTTTGAGAGGTC 1383
Query 1384 TTCTCTATTTCTGCGGCTGGAGGCGAGGCTGAAAAGGATAA-CCTCTGATTACTGGCAAA 1442
|||||||||| |||||||||||||||| |||||| ||| || |||||||||||| |
Sbjct 1384 GTCTCTATTTCAGCGGCTGGAGGCGAGGTTGAAAAAGATTGTCCA-TGATTACTGGCAGA 1442
Query 1443 ATCACTGTCACA--TTTTCGGATACCAA-ACTGCTCAAA-TCCCTGCA---GAT---AAG 1492
|| |||| || |||| |||||| || | | | ||| | |||||| | | |||
Sbjct 1443 GCCA-TGTC-CAAGTTTTTGGATAC-AATATTTAT-AAAGTGCCTGCACCTGCTGTTAAG 1498
Query 1493 TCGAAAAGGACAGTAATACCTGATCAACCGCCTACTGTCAATACATACAATCCTTCGCCT 1552
||||||| || || ||||| ||||||||| |||||||| ||||||| ||||| || |||
Sbjct 1499 TCGAAAAAGATAGCAATACGTGATCAACCACCTACTGTTAATACATTCAATCATTTACCT 1558
Query 1553 TTGCCTTCTGATAGAATCAGTCATGGTGGTCCTATAATACGTGAAATCAATCTTAGTAAC 1612
||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||
Sbjct 1559 TTGCCTTCTGATAGAATCAGTCAAGGTGGTCCGATAATACGTGAAATCAGTCTTAGTAAT 1618
Query 1613 GCCACTTCAAGCCGAACAGCTGCTGTTGCCGCGCCACATTTGAGAAATTACACAGGTTTA 1672
|||||||||||||| |||| ||||||||| ||||||||||||||||||| ||| ||| ||
Sbjct 1619 GCCACTTCAAGCCGTACAGTTGCTGTTGCAGCGCCACATTTGAGAAATTCCACGGGTCTA 1678
Query 1673 AGAAATAACTTCCAACCCGTGCAGCTCAACCCACAACCA-C--CTGC---A-G------- 1718
|||| |||||||||||| |||||||||| ||| ||||| | || | | |
Sbjct 1679 AGAAGTAACTTCCAACCAGTGCAGCTCAGCCCTCAACCTGCAGCTACCGTAAGTGAAATA 1738
Query 1719 -CTG----GC-G-ATACTGGAAACAACCTCGTTGGCAAGTTAGCGGCTGAGATACGCGAA 1771
|| || | |||||| ||||||||| ||||||| || ||||| ||||||| |||||
Sbjct 1739 TCTTCCCAGCTGGATACTGAAAACAACCTTGTTGGCATGTCAGCGGATGAGATAAGCGAA 1798
Query 1772 GAGAACTTACAACTCTTCATGAGGTGCGAGGAATATGTAAAGAAAGAGA-ATGAAGTAGA 1830
|||||| | |||||||||||||||||||||||||||||||||||||| | | ||| | ||
Sbjct 1799 GAGAACATGCAACTCTTCATGAGGTGCGAGGAATATGTAAAGAAAGAAACA-GAAATGGA 1857
Query 1831 ACAGACGGTAAAG-AGCTTAGAAAAAGAACTGGAAGAAATTAAAAGTAAATGTGCACAAC 1889
|||| |||||| | | ||||||||| ||||||||||||| ||||||||||||||||| ||
Sbjct 1858 ACAGGCGGTAA-GTAACTTAGAAAAGGAACTGGAAGAAACTAAAAGTAAATGTGCACGAC 1916
Query 1890 TTGCTCTGCTTGTGGATGCTAAGAAGAAGGAGATGCAACA 1929
|||| ||||| ||||||||||||| || ||||||||||||
Sbjct 1917 TTGCACTGCTCGTGGATGCTAAGAGGAGGGAGATGCAACA 1956
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80560868175
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5