BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G36580.1
Length=2026
Score E
Sequences producing significant alignments: (Bits) Value
Ahg480742 jgi|Araly1|480742|fgenesh2_kg.3__3443__AT2G18330.1 1661 0.0
Ahg490979 jgi|Araly1|490979|fgenesh2_kg.7__412__AT4G36580.1 1578 0.0
> Ahg480742 jgi|Araly1|480742|fgenesh2_kg.3__3443__AT2G18330.1
Length=2073
Score = 1661 bits (899), Expect = 0.0
Identities = 1576/1894 (83%), Gaps = 81/1894 (4%)
Strand=Plus/Plus
Query 14 ATGGCTGCTTCTAGATTGTGTTCCGCGGCGGCGATAGCTGCTGCGTTCACTTCAATGTCA 73
||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct 165 ATGGCTGCTTCTAGATTATGTTCGGCGGCGGCGATAGCTGCTGCGTTCACTTCAATGTCG 224
Query 74 ATGTCTCAGAACCGTGCTTACGCCGAttcttctcgattccggtttcctttcttttcttct 133
||||| |||||||| |||||||| || || | ||||| || ||||||||||| ||||||
Sbjct 225 ATGTCACAGAACCGCGCTTACGCTGA--CT-CGCGATTTCGCTTTCCTTTCTTCTCTTCT 281
Query 134 tctccttctcctcctccgtcagattctccGGC-GAATCAA---TCTTCATCGAA-GT--C 186
|| ||| | | | | ||| ||||| | || |||| ||||||||||| | |
Sbjct 282 TCACCT-C-CGGCA---GA-AGAATCTCCAACCGA-TCAAAAGTCTTCATCGAATGAGAC 334
Query 187 TAAAGCAGAG-CCTGATGAGCCTAAAGGATCGGGTTTTGATCCTGAGGCTCTTG-AGAGA 244
|||| | || || ||||| ||||||||||| ||||| ||||||||| || ||| | |||
Sbjct 335 TAAACCTGACTCC-GATGAACCTAAAGGATCTGGTTTCGATCCTGAGTCT-TTGGAAAGA 392
Query 245 GCTGCTAAAGCTCTTAGAGATATCAATAGCTCTCCCCATTCCAAGCAGGTGTTTGATCTC 304
| ||||||||||||| | || ||||| |||||||| ||||| || ||||||||||||||
Sbjct 393 GGTGCTAAAGCTCTTCGTGAAATCAACAGCTCTCCTCATTCGAAACAGGTGTTTGATCTA 452
Query 305 ATGAGGAAGCAGGAGAAAACTCGGTTAGCTGAATTAACGGCAGAGACTTCTCATTACGAA 364
||| | ||||||||||||||||| |||||||||||| | || |||| ||| | |||
Sbjct 453 ATGCGAAAGCAGGAGAAAACTCGATTAGCTGAATTAGCTGCTGAGAAAGAACATAATGAA 512
Query 365 GCTATTCAAGCACACAATGATATTGGCAGACAGCAGAAATTGGCTGAGGACCAGAGAAAT 424
||||||||||| ||||| || |||| ||||||| ||||||||||||||| |||||||||
Sbjct 513 GCTATTCAAGCTCACAAGGACATTGAAAGACAGCGGAAATTGGCTGAGGATCAGAGAAAT 572
Query 425 CTTT-TGCAGACA-CAGGCGCAAACCAAAGCGCAAAAT-CTGCGATATGAGGATGAATTG 481
|| ||||| || ||||| ||| | |||||||||| | || |||||||||||||| |||
Sbjct 573 -TTAGTGCAG-CAACAGGCACAAGCGAAAGCGCAAA-TGCTACGATATGAGGATGAGTTG 629
Query 482 GCCAGAAAGAGACA-GCAGACAGATCATGAAGCTCAGAGGCATCATAATG-TGGAATTGG 539
|| || |||||| | |||||||||| ||||||||||||| | ||||||| || ||||||
Sbjct 630 GCAAGGAAGAGA-ATGCAGACAGATAATGAAGCTCAGAGACGGCATAATGCTG-AATTGG 687
Query 540 TTAAGATGCAAGAGGCGTCTTCTAT-CAGGAAAGAGAAGGCAAAAATCGCCACAGAAGAA 598
|| ||||||||||| ||||||||| | |||||||||| |||| ||| ||||| ||| ||
Sbjct 688 TTTCGATGCAAGAGGAGTCTTCTATAC-GGAAAGAGAAAGCAAGAATTGCCACGGAACAA 746
Query 599 CAGATCCAAGCTCAGCATCGCCAAACTGAGAAAGAGAGAGCTGAACTTGAGCGAGAGACG 658
||||| ||||| ||||| ||||| ||||||||||||||||||||||||||| |||| ||
Sbjct 747 CAGATTCAAGCACAGCAGCGCCAGACTGAGAAAGAGAGAGCTGAACTTGAGAGAGAAACA 806
Query 659 ATTCGTGTCAAGGCCATGGCTGAAGCTGAAGGTCGGGCTCATGAAGCCAAACTTACTGAA 718
||||| || |||||||||||||| |||||||| || ||||||||||| |||||||||||
Sbjct 807 ATTCGCGTTAAGGCCATGGCTGAGGCTGAAGGCCGAGCTCATGAAGCTAAACTTACTGAG 866
Query 719 GAGCAAAACAGAAGATTGCTTATGGA-AAGGATTAATGGTGAAAGAGAGAAGTGGCTTGC 777
||||| || |||||| ||||| |||| ||| |||||||||||||| ||||| ||||||||
Sbjct 867 GAGCAGAATAGAAGAATGCTTCTGGATAAG-ATTAATGGTGAAAGGGAGAAATGGCTTGC 925
Query 778 TGCAATCAACACAA-TGTTCAGTCACATCGAAGGGGGATTCAGGACCTTATTAACTGATC 836
||||||||||||| | |||||||| || ||||| ||| | |||||||||||||||||||
Sbjct 926 AGCAATCAACACAACT-TTCAGTCATATTGAAGGAGGAGTAAGGACCTTATTAACTGATC 984
Query 837 GAAATAAGCTGATTATGACTGTTGGAGGAGCTACTGCATTAGCTGCAGGGGTTTATACAA 896
||| ||| |||||||||||||||||||| ||| ||||||||||| |||||||| ||||
Sbjct 985 GAAGTAAATTGATTATGACTGTTGGAGGAATTACGGCATTAGCTGCTGGGGTTTACACAA 1044
Query 897 CTCGTGAAGGAGCTAGAGTTACATGGGGTTATATTAATAGGATGCTTGGACAACCGTCAC 956
|||| || || ||||| ||||| |||||||||||||| || || ||||| || || ||||
Sbjct 1045 CTCGAGAGGGTGCTAGGGTTACCTGGGGTTATATTAACAGAATTCTTGGGCAGCCATCAC 1104
Query 957 TTATTC-GAGAATCTTCCATGCGTAGATTTCCATGGACAGGCTCAGTGTCTCAATTTAAG 1015
| || | ||||||| |||||| ||||||| |||||| |||||||||||||||| ||||||
Sbjct 1105 TGAT-CAGAGAATCGTCCATGGGTAGATTCCCATGGGCAGGCTCAGTGTCTCAGTTTAAG 1163
Query 1016 AACAGGATCTCAGGG--GCTGCAGCAGCTTCTGCA---GCAGAAGGCA-AAAAGCCGCTT 1069
|||| | || || ||||||| || | ||| |||||||| | ||||||| |||
Sbjct 1164 AACAA-A-CTTAGCACAGCTGCAGGGGCCGCAGCATCTGCAGAAGG-AGAAAAGCCCCTT 1220
Query 1070 GATAATGTAATTCTCCATAC-TTCTTTGAAGAA-ACGAATCGAGCGTCTCGCTAGAGCTA 1127
|| ||||||||||||||| | ||||||||||| | |||| |||||||| || ||||| |
Sbjct 1221 GAAAATGTAATTCTCCAT-CGTTCTTTGAAGACGA-GAATTGAGCGTCTTGCAAGAGCCA 1278
Query 1128 CAGCAAACACCAAATCCCATCAAGCACCATTCCGCAACATGATGTTTTATGGACCTCCTG 1187
||||||| ||||| |||||| ||||||||||||| ||||||||||||||||| |||||||
Sbjct 1279 CAGCAAATACCAAGTCCCATAAAGCACCATTCCGAAACATGATGTTTTATGGGCCTCCTG 1338
Query 1188 GTACCGGTAAAACTATGGTGGCAAGGGAAATAGCTCGGAAATCGGGTCTGGATTATGCTA 1247
|||| || |||||| ||||||| ||||| || ||||||||||||||||| ||||||||||
Sbjct 1339 GTACTGGAAAAACTTTGGTGGCGAGGGAGATTGCTCGGAAATCGGGTCTTGATTATGCTA 1398
Query 1248 TGATGACAGGAGGTGATGTTGCTCC-CTTGG-GATCACAAGCTGTTACTAAA-ATCCATC 1304
||||||||||||| ||||||||||| ||||| | |||| |||||||| ||| ||||||
Sbjct 1399 TGATGACAGGAGGAGATGTTGCTCCTCTTGGTG--CACAGGCTGTTAC-AAAGATCCATG 1455
Query 1305 AGATATTTGATTGGGCTAAGAAATCGAACAAAGGCTTACTTCTTTTCATTGATGAAGCCG 1364
| ||||||||||||||||||||||| |||||||| ||||| |||||||| |||||||| |
Sbjct 1456 AAATATTTGATTGGGCTAAGAAATCAAACAAAGGGTTACTGCTTTTCATCGATGAAGCTG 1515
Query 1365 ATGCTTTTCTATGCGAGCGTAACAGCACTTACATGAGTGAGGCTCAACGTAGTGCTCTGA 1424
||||||| |||||||| ||||||||||| ||||||||||||||||| || || |||||||
Sbjct 1516 ATGCTTTCCTATGCGAACGTAACAGCACGTACATGAGTGAGGCTCAGCGCAGCGCTCTGA 1575
Query 1425 ACGCTTTGCTCTTCCGAACTGGTGATCAATCTCGGGACATTGTTCTTGTCTTGGCTACAA 1484
|||| |||||||| ||||| ||||||||||| |||||||| ||||||||| |||||||||
Sbjct 1576 ACGCGTTGCTCTTTCGAACCGGTGATCAATCACGGGACATAGTTCTTGTCCTGGCTACAA 1635
Query 1485 ACAGACGTGGAGATCTCGATAGTGCGGTTACAGACAGGATTGATGAAGTCATTGAGTTCC 1544
|||||| |||||||| || ||||| || || |||||||| || ||||| || ||||| |
Sbjct 1636 ACAGACCCGGAGATCTGGACAGTGCAGTCACTGACAGGATCGACGAAGTAATCGAGTTTC 1695
Query 1545 CACTTCCAGGGGAAGAAGAACGTTTCAAGCTTCTCAATCTCTATCTCAACAAATATCTAA 1604
| || || || ||||||||||| |||||||| ||||| |||||||||||||| || ||||
Sbjct 1696 CTCTCCCTGGTGAAGAAGAACGCTTCAAGCTCCTCAAGCTCTATCTCAACAAGTACCTAA 1755
Query 1605 AGATGGGTGATA-ACAACGAA-GAC-ACAAAA-C-CGAA----A--TGGAGTCAT-TTGT 1652
||||||| | |||| ||| | | |||| | |||| | ||||| || ||||
Sbjct 1756 ---TGGGTGA-AGACAA-GAAAGGTGAGAAAAACTCGAACCTTAAATGGAG-CAACTTGT 1809
Query 1653 TTAAGAAGCTG---TCACAGAAGATTACCGTTGAAGAAGACTTAACTGATAAAGTGATTT 1709
| |||||| | ||||||||||| ||| |||||| |||| |||| || |||||||
Sbjct 1810 TCAAGAAGAAGAAGTCACAGAAGATAACCATTGAAGGAGACCTAACCGACCAAGTGATCA 1869
Query 1710 CTGAGGCTGCAAAGAAGACAGAAGGATTCTCTGGCCGTGAGATTGCAAAGCTTGTGGCTG 1769
|| |||||||| ||||||||||| |||||||| ||||| || || |||||||| || |
Sbjct 1870 AAGAAGCTGCAAAAAAGACAGAAGGCTTCTCTGGTCGTGAAATCGCTAAGCTTGTCGCCG 1929
Query 1770 GAGTACAAGCTG-GAGTGTACGGACGAGCGGATTGTGTTTTGGATTCACAGCTTTTTAAA 1828
| || ||||||| | || ||||||||| ||||||| || |||||||| ||||||||| ||
Sbjct 1930 GTGTTCAAGCTGCG-GTATACGGACGACCGGATTGCGTCTTGGATTCCCAGCTTTTTGAA 1988
Query 1829 GAGATTGTTGAATATAAGGTTGAAGAACATCACC 1862
|||||||| || ||||| | |||||||||||||
Sbjct 1989 GAGATTGTGGATTATAAAATCGAAGAACATCACC 2022
> Ahg490979 jgi|Araly1|490979|fgenesh2_kg.7__412__AT4G36580.1
Length=1869
Score = 1578 bits (854), Expect = 0.0
Identities = 937/978 (96%), Gaps = 2/978 (0%)
Strand=Plus/Plus
Query 936 GGATGCTTGGACAACCGTCACTTATTCGAGAATCTTCCATGCGTAGATTTCCATGGACAG 995
|||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||
Sbjct 893 GGATGCTTGGACAACCATCACTTATTCGAGAATCTTCCATGGGTAGATTTCCATGGGCAG 952
Query 996 GCTCAGTGTCTCAATTTAAGAACAGGATCTCAGGGGCTGCAGCAGCTTCTGCAGCAGAAG 1055
||||| |||||||||| |||||||| |||||||| || |||||||| |||||||||||||
Sbjct 953 GCTCAATGTCTCAATTGAAGAACAGAATCTCAGGTGCAGCAGCAGCATCTGCAGCAGAAG 1012
Query 1056 GCAAAAAGCCGCTTGATAATGTAATTCTCCATACTTCTTTGAAGAAACGAATCGAGCGTC 1115
| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1013 GGAAAAAGCCACTTGATAATGTAATTCTCCATACTTCTTTGAAGAAACGAATCGAGCATC 1072
Query 1116 TCGCTAGAGCTACAGCAAACACCAAATCCCATCAAGCACCATTCCGCAACATGATGTTTT 1175
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1073 TCGCTAGAGCTACAGCAAATACCAAATCCCATCAAGCACCATTCCGCAACATGATGTTTT 1132
Query 1176 ATGGACCTCCTGGTACCGGTAAAACTATGGTGGCAAGGGAAATAGCTCGGAAATCGGGTC 1235
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1133 ATGGACCTCCTGGTACCGGTAAAACTATGGTCGCAAGGGAAATAGCTCGAAAATCGGGTC 1192
Query 1236 TGGATTATGCTATGATGACAGGAGGTGATGTTGCTCCCTTGGGATCACAAGCTGTTACTA 1295
|||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 1193 TGGATTATGCTATGATGACAGGTGGAGATGTTGCTCCCTTGGGATCACAAGCTGTTACTA 1252
Query 1296 AAATCCATCAGATATTTGATTGGGCTAAGAAATCGAACAAAGGCTTACTTCTTTTCATTG 1355
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1253 AAATCCATCAGATATTTGATTGGGCCAAGAAATCGAACAAAGGCTTACTTCTTTTCATTG 1312
Query 1356 ATGAAGCCGATGCTTTTCTATGCGA-GCGTAACAGCACTTACATGAGTGAGGCTCAACGT 1414
||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 1313 ATGAAGCCGATGCTTTTCTATGC-AGGCGTAACAGCACTTACATGAGTGAGGCTCAACGT 1371
Query 1415 AGTGCTCTGAACGCTTTGCTCTTCCGAACTGGTGATCAATCTCGGGACATTGTTCTTGTC 1474
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1372 AGTGCTCTGAATGCTTTGCTCTTCCGAACCGGTGATCAATCTCGGGACATTGTTCTTGTC 1431
Query 1475 TTGGCTACAAACAGACGTGGAGATCTCGATAGTGCGGTTACAGACAGGATTGATGAAGTC 1534
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1432 TTAGCTACAAACAGACCTGGAGATCTCGATAGTGCGGTTACAGACAGGATTGATGAAGTC 1491
Query 1535 ATTGAGTTCCCACTTCCAGGGGAAGAAGAACGTTTCAAGCTTCTCAATCTCTATCTCAAC 1594
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1492 ATTGAGTTCCCACTTCCAGGGGAAGAAGAACGTTTCAAGCTTCTCAATCTCTATCTCAAT 1551
Query 1595 AAATATCTAAAGATGGGTGATAACAACGAAGACACAAAACCGAAATGGAGTCATTTGTTT 1654
||||||||||||| |||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct 1552 AAATATCTAAAGAGGGGTGACAACAACAAAGACACAAAACCGAAATGGAGTCATTTGTTT 1611
Query 1655 AAGAAGCTGTCACAGAAGATTACCGTTGAAGAAGACTTAACTGATAAAGTGATTTCTGAG 1714
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||
Sbjct 1612 AAGAAGCTGTCACAGAAGATTACCGTTGAAGCAGACCTAACTGATAAAGTGATTTCTGAG 1671
Query 1715 GCTGCAAAGAAGACAGAAGGATTCTCTGGCCGTGAGATTGCAAAGCTTGTGGCTGGAGTA 1774
||||| |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 1672 GCTGCGAAGAAGACGGAAGGATTCTCTGGCCGTGAAATTGCAAAGCTTGTGGCCGGAGTA 1731
Query 1775 CAAGCTGGAGTGTACGGACGAGCGGATTGTGTTTTGGATTCACAGCTTTTTAAAGAGATT 1834
|||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||
Sbjct 1732 CAAGCTGGAGTGTACGGACGAGAGGATTGTGTATTGGATTCACAGCTTTTCAAAGAGATT 1791
Query 1835 GTTGAATATAAGGTTGAAGAACATCACCGAAGGCATATGCTTGCTTCTGAAGGTTTTCAG 1894
|||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||
Sbjct 1792 GTTGAATATAAGGTTGAAGAACATCACCAAAGGCTTAGGCTTGCTTCTGAAGGTTTTCAA 1851
Query 1895 CCATTACTCTTCTCTTAG 1912
||||||||||||||||||
Sbjct 1852 CCATTACTCTTCTCTTAG 1869
Score = 1395 bits (755), Expect = 0.0
Identities = 858/904 (95%), Gaps = 22/904 (2%)
Strand=Plus/Plus
Query 8 AAATCGATGGCTGCTTCTAGATTGTGTTCCGCGGCGGCGATAGCTGCTGCGTTCACTTCA 67
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 AAATCCATGGCTGCTTCTAGATTGTGTTCCGCGGCGGCGATAGCTGCTGCGTTCACTTCA 60
Query 68 ATGTCAATGTCTCAGAACCGTGCTTACGCCGAttcttctcgattccggtttcctttcttt 127
||||| ||||| ||||||||||| |||||||| ||||||||||||||||||||||
Sbjct 61 ATGTCGATGTCACAGAACCGTGCGTACGCCGA---TTCTCGATTCCGGTTTCCTTTC--- 114
Query 128 tcttcttctccttctcctcctccgtcagattctccGGCGAATCAA---TCTTC--A-TC- 180
| ||| | | ||||||||||||||||||||||||||||||||||| ||||| | ||
Sbjct 115 TATTC-T-T-CTTCTCCTCCTCCGTCAGATTCTCCGGCGAATCAATCTTCTTCGAACTCT 171
Query 181 -G-AAGTCTAAAGCAGAGCCTGATGAGCCTAAAGGATCGGGTTTTGATCCTGAGGCTCTT 238
| ||||||||| ||||| ||||||||||||||||||||||||||||||||||| | |||
Sbjct 172 AGTAAGTCTAAACCAGAGGCTGATGAGCCTAAAGGATCGGGTTTTGATCCTGAGTCCCTT 231
Query 239 GAGAGAGCTGCTAAAGCTCTTAGAGATATCAATAGCTCTCCCCATTCCAAGCAGGTGTTT 298
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 232 GAGAGAGCTGCAAAAGCTCTTAGAGATATCAATAGCTCTCCCCATTCCAAACAGGTGTTT 291
Query 299 GATCTCATGAGGAAGCAGGAGAAAACTCGGTTAGCTGAATTAACGGCAGAGACTTCTCAT 358
|||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 292 GATCTCATGAGGAAGCAGGAGAAAACTCGGTTAGCTGAATTAGCGGCAGAGTCTTCTCAA 351
Query 359 TACGAAGCTATTCAAGCACACA-ATGATATTG-GCAGACAGCAGAAATTGGCTGAGGACC 416
|||||||||||||||||||||| | ||||||| | ||||| |||||||||||||||||||
Sbjct 352 TACGAAGCTATTCAAGCACACAGA-GATATTGAG-AGACAACAGAAATTGGCTGAGGACC 409
Query 417 AGAGAAATCTTTTGCAGACACAGGCGCAAACCAAAGCGCAAAATCTGCGATATGAGGATG 476
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 410 AGAGAAATCTTTTGCAGACACAGGCGCAAACCAAAGCGCAAATTCTGCGATATGAGGATG 469
Query 477 AATTGGCCAGAAAGAGACAGCAGACAGATCATGAAGCTCAGAGGCATCATAATGTGGAAT 536
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 470 AATTAGCCAGAAAGAGACAGCAGACAGATCATGAAGCTCAGAGACATCATAATGTGGAAT 529
Query 537 TGGTTAAGATGCAAGAGGCGTCTTCTATCAGGAAAGAGAAGGCAAAAATCGCCACAGAAG 596
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 530 TGGTTAAGATGCAAGAGGCGTCTTCTATCAGGAAAGAGAGGGCAAAAATCGCCACAGAAG 589
Query 597 AACAGATCCAAGCTCAGCATCGCCAAACTGAGAAAGAGAGAGCTGAACTTGAGCGAGAGA 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 590 AACAGATCCAAGCTCAGCATCGCCAAACTGAGAAAGAGAGAGCTGAACTTGAGCGAGAGA 649
Query 657 CGATTCGTGTCAAGGCCATGGCTGAAGCTGAAGGTCGGGCTCATGAAGCCAAACTTACTG 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 650 CGATTCGTGTCAAGGCCATGGCTGAAGCTGAAGGTCGGGCTCATGAAGCCAAACTTACTG 709
Query 717 AAGAGCAAAACAGAAGATTGCTTATGGAAAGGATTAATGGTGAAAGAGAGAAGTGGCTTG 776
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 710 AAGAGCAAAACAGAAGATTGCTTCTGGAAAGGATTAATGGTGAAAGGGAGAAGTGGCTTG 769
Query 777 CTGCAATCAACACAATGTTCAGTCACATCGAAGGGGGATTCAGGACCTTATTAACTGATC 836
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 770 CTGCAATCAACACCATGTTCAGTCACATCGAAGGGGGATTCAGGACCTTATTAACCGATC 829
Query 837 GAAATAAGCTGATTATGACTGTTGGAGGAGCTACTGCATTAGCTGCAGGGGTTTATACAA 896
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 830 GAAATAAGCTGATTATGACTGTTGGAGGAGCTACTGCATTAGCTGCAGGGATTTATACAA 889
Query 897 CTCG 900
||||
Sbjct 890 CTCG 893
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 76180490000
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5