BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G37120.1 Length=1814 Score E Sequences producing significant alignments: (Bits) Value Ahg490928 jgi|Araly1|490928|fgenesh2_kg.7__361__AT4G37120.1 2687 0.0 Ahg475672 jgi|Araly1|475672|fgenesh2_kg.2__802__AT4G37120.1 2050 0.0 Ahg937284 jgi|Araly1|937284|scaffold_501475.1 599 2e-170 > Ahg490928 jgi|Araly1|490928|fgenesh2_kg.7__361__AT4G37120.1 Length=1796 Score = 2687 bits (1455), Expect = 0.0 Identities = 1698/1813 (94%), Gaps = 26/1813 (1%) Strand=Plus/Plus Query 10 GAAGCTTAACGATCGTAACAATCATGGCGACGGCTTCAGTTGCTTTTAAGTCTAGGGAAG 69 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GAAGCTTAACGATCGTAATAATCATGGCGACGGCTTCAGTTGCTTTTAAGTCTAGGGAAG 60 Query 70 ATCACAGGAAGAAATTAGAATTAGAGGAAGCTCGTAAAGCTGGTCTCGCTCCTGCTGAGG 129 |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 61 ATCATAGGAAGAAATTAGAATTAGAGGAAGCTCGTAAAGCTGGTCTTGCTCCTGCTGAGG 120 Query 130 TAGACGAAGATGGCAAAGAAATCAATCCTCACATACCTGAGTATATGTCAAAAGCTCCAT 189 | || || |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 TCGATGAGGATGGCAAAGAAATCAATCCTCACATACCTGAGTATATGTCAAAAGCTCCAT 180 Query 190 GGTATCTCAAGTCTGAACAGCCGAGTTTGAAGCATCaaaaaaaTTGGAAAATTGAACCCG 249 |||||||||| |||||| | |||||||||||||||||||| |||||||||| |||||||| Sbjct 181 GGTATCTCAACTCTGAAAAACCGAGTTTGAAGCATCAAAAGAATTGGAAAACTGAACCCG 240 Query 250 AACCCAAAAAGATATGGTATGATAGAGGTAAAAAGATCTATCAAGCTGAACAATACCGCA 309 ||| |||||| |||||||||||||||||| ||||||| ||||||| ||| ||||||||| Sbjct 241 AACTCAAAAAAATATGGTATGATAGAGGTGCAAAGATCCATCAAGCCGAAAAATACCGCA 300 Query 310 AGGGAGCGTGTATAAACTGTGGTGCAATGACTCACAGTTCTAAAGCATGTATGGATAGAC 369 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 301 AGGGAGCGTGTATAAACTGTGGTGCAATGACGCACAGTTCTAAAGCATGTATGGATAGAC 360 Query 370 CTCGTAAGATTGGAGCTAAATACACAAACATGAACATTGCTGCTGATGAGAAAATCGAGA 429 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 361 CTCGTAAGATTGGAGCTAAATACACAAACATGAACATTGCAGCTGATGAGAAAATCGAGA 420 Query 430 GTTTTGAACTTGACTATGATGGGAAGAGGGACAGATGGAACGGTTATGATACTTCAACCT 489 |||||||||||||||||||||| ||||| ||||||||||| ||||||||| ||||| ||| Sbjct 421 GTTTTGAACTTGACTATGATGGCAAGAGAGACAGATGGAATGGTTATGATCCTTCATCCT 480 Query 490 ACCGTCATGTGGTAGATCGTTATGATGCTAAAGAGGAGGCACGAAAGAAGTATCTCAAGG 549 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 481 ACCGTCATGTGGTAGATCGTTATGATGCAAAAGAGGAGGCACGAAAGAAGTATCTCAAGG 540 Query 550 AGCAGCAACTTAAGAAACTAGAGGAGAAGAACAATAATGAAAACGGTGATGATGCAACCA 609 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 541 AGCAGCAACTTAAGAAACTAGAGGAGAAGAACAATAATGAAAACGGTGATGATGCAACCA 600 Query 610 GTGATGGGGAGGAAGACCTTGACGACTTGAGGGTCGATGAAGCTAAGGTTGATGAGAGTA 669 |||||||||||||| || ||||||||| |||||||||||||| |||||||||||||| | Sbjct 601 GTGATGGGGAGGAATACAATGACGACTTAAGGGTCGATGAAGCCAAGGTTGATGAGAGCA 660 Query 670 GGCAAATGGATTTTGCAAAGGTTGAGAAACGTGTTCGAACAACTGGTGGTGGTAGCACAG 729 |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 661 GGCAGATGGATTTTGCAAAGGTTGAAAAACGTGTTCGAACAACTGGTGGTGGTAGCACAG 720 Query 730 GAACTGTTAGGAATCTGCGTATCAGAGAAGACACTGCTAAATACCTGTTGAATCTTGATG 789 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 721 GAACTGTTAGGAATCTGCGTATCAGAGAAGACACTGCAAAATACCTGTTGAATCTTGATG 780 Query 790 TAAACTCAGCTCATTATGACCCTAAAACTCGGTCCATGCGTGAAGATCCACTTCCAGATG 849 | |||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| Sbjct 781 TCAACTCAGCTCATTATGACCCGAAAACTCGATCCATGCGTGAAGATCCACTTCCAGATG 840 Query 850 CAGATCCAAATGAAAAATTCTATTTGGGAGATAATCAATATAGAAACAGTGGCCAAGCTC 909 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 CAGATCCAAATGAAAAATTCTATTTGGGAGATAATCAATATAGAAACAGTGGCCAAGCTT 900 Query 910 TGGAGTTCAAACAGATAAACATCCATTCATGTGAAGCATTTGACAAGGGACATGACATGC 969 |||||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||| Sbjct 901 TGGAGTTCAAACAGCTAAACGTCCATTCATGTGAAGCATTTGACAAGGGACAGGACATGC 960 Query 970 ATATGCAAGCGGCTCCATCCCAAGCTGAATTGCTCTATAAGAACTTTAAAGTTGCAAAGG 1029 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 961 ATATGCAAGCGGCTCCTTCCCAAGCTGAATTGCTCTATAAGAACTTTAAAGTTGCAAAGG 1020 Query 1030 AAAAACTGAAAA-CTCAGACAAAGGACACCATTATGGAAAAGTATGGGAATGCAGCTAC- 1087 ||||||| |||| |||||||||| ||||| || ||||||||||| |||||||||||||| Sbjct 1021 AAAAACT-AAAATCTCAGACAAAAGACACAATCATGGAAAAGTACGGGAATGCAGCTACC 1079 Query 1088 AGAAGGTGAAATTCCGATGGAGCTTTTGCTTGGCCAAAGTGAAAGACAAATTGAGTATGA 1147 | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1080 A-AAGGTGAAATTCCGATGGAGCTTTTGCTTGGCCAAAGTGAAAGACAAGTTGAGTATGA 1138 Query 1148 CAGGGCAGGGAGGATTATGAAGGGACAGGAGGTGATAATTCCAAAGAGCAAATATGAAGA 1207 ||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1139 CAGGGCAGGCAGGATTATAAAGGGACAGGAGGTGATAATTCCAAAGAGCAAATATGAAGA 1198 Query 1208 AGATGTTCATGCTAACAATCACACAAGTGTTTGGGGATCATGGTGGAAAGATCACCAATG 1267 |||||||||||| ||||||||||||||||||||||| |||||||||||||| || || || Sbjct 1199 AGATGTTCATGCCAACAATCACACAAGTGTTTGGGGTTCATGGTGGAAAGACCATCAGTG 1258 Query 1268 GGGATATAAATGTTGCCAGCAGACAATTCGCAACAGCTATTGCACAGGTTCTGCTGGAAT 1327 |||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 1259 GGGATATAAATGCTGCCAGCAGACCATTCGCAACAGCTACTGCACAGGTTCTGCTGGAAT 1318 Query 1328 TGAAGCTGCAGAGGCGTCCATTGATCTGATGAAGGCTAATATTGCTCGCAAAGAAGCTTC 1387 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1319 TGAAGCTGCAGAGGCGTCCCTTGATCTGATGAAGGCTAATATTGCTCGCAAAGAAGCTTC 1378 Query 1388 TAAAGAGAGTCCGAAGAAGGTTGAAGAGAAGAAAATGGCGACATGGGGAACTGATATTCC 1447 |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 1379 TAAAGAGAGTCCGAAGAAGGTTGAAGAGAAGAGAATGGCGACATGGGGAACCGATATTCC 1438 Query 1448 TGAAGATTTGGAATTGAACGAGGAGGCACTTGCAAATGCTCTTAAAAAGGAGGATCTAAG 1507 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct 1439 TGAAGATTTGGAATTGAACGAGGAGGCTCTTGCCAATGCTCTTAAAAAGGAGGATCTAAG 1498 Query 1508 TAGGAGGGAAGAAAAAGATGAGAGGAAACGCAAATACAATGTCAATTACACCAACGATGT 1567 || |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1499 TAAGAGGGAAGAAAAAGATGAGAGGAAACGCAAATACAATGTCAAATACACCAACGATGT 1558 Query 1568 GACCTCCGAGGAGATGGAAGCTTACAGAATGAAGAGAGTTCACCACGAGGACCCAATGAG 1627 ||| || || || ||||||||||| |||||||||||||||||||| ||||| ||||||| Sbjct 1559 GACTTCGGAAGATATGGAAGCTTATAGAATGAAGAGAGTTCACCATGAGGATCCAATGA- 1617 Query 1628 AA-ATTTCCCCGGCTGAT--AAATGTCTTTTCCCTTTCACCATATTAAGCTGAAGAAACC 1684 || |||||| |||||||| ||| ||||| ||||||||||||||||| ||||||||||| Sbjct 1618 AAGATTTCCTCGGCTGATTTAAAC-TCTTT-CCCTTTCACCATATTAACCTGAAGAAACC 1675 Query 1685 TTGTTTTTAAGTTTCATGTCTTTAAATAAGAC-CCTTG-TTATTCATGTCATTATTTGTT 1742 || ||||| | | |||||||||||||| |||| |||||||| |||||||||||| Sbjct 1676 TTATTTTTTA-----A-GTCTTTAAATAAGAGACCTTTCTTATTCATATCATTATTTGTT 1729 Query 1743 ACTGTCTTCATG-TCCACCCAAAGATTCATTAT-ATAACGTATGAAACTAGAATAAATTT 1800 | ||||||| | | || | |||| ||| | ||| ||||||||||||||||| || Sbjct 1730 A--GTCTTCAAGATTCATT-AT-GATT--TTAACAAAACTTATGAAACTAGAATAAAATT 1783 Query 1801 TCTTAGCCAAATC 1813 ||||||||||||| Sbjct 1784 TCTTAGCCAAATC 1796 > Ahg475672 jgi|Araly1|475672|fgenesh2_kg.2__802__AT4G37120.1 Length=1636 Score = 2050 bits (1110), Expect = 0.0 Identities = 1476/1651 (89%), Gaps = 31/1651 (2%) Strand=Plus/Plus Query 8 TCGAAGCTTAACGATCGTAACAATCATGGCGACGGCTTCAGTTGCTTTTAAGTCTAGGGA 67 ||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct 2 TCGAAGCTTCACGATCGT-ATAATCATGGCGACGGCTTCAGTTGCTTTTAAGTCTAGGGA 60 Query 68 AGATCACAGGAAG-AAATTAGAATTAGAGGAAGCTCGTAAAGCTGGTCTCGCTCCTGCTG 126 |||||| |||||| ||| | ||||||||||||||||||||||| || || ||||| |||| Sbjct 61 AGATCATAGGAAGCAAA-TCGAATTAGAGGAAGCTCGTAAAGCCGGGCTTGCTCCAGCTG 119 Query 127 AGGTAGACGAAGATGGCAAA-GAAATCAATCCTCACATACCTG-AGTATATGTCAAAAGC 184 |||| || || ||||| ||| |||||||||||||| || || | ||||||||||| || Sbjct 120 AGGTTGATGAGGATGG-AAAGGAAATCAATCCTCATAT-CCCGCAGTATATGTCATCTGC 177 Query 185 TCCATGGTATCTCAAGTCTGAACAGCCGAGTTTGAAGCATCaaa-aaaaTTGGAAAATTG 243 |||||||||||| || |||||| | ||||||||||||||||||| ||| ||||| | || Sbjct 178 TCCATGGTATCTTAATTCTGAAAAACCGAGTTTGAAGCATCAAAGGAAA-TGGAAGAGTG 236 Query 244 AACCCGAA-CCCAAAAAGAT-ATGGTATGATAGAGGTAAAAAGATCTATCAAGCTGAACA 301 | || || || ||| | ||||||||| |||||| |||||||| |||||||||| | Sbjct 237 -ATCCTAATTACACTAAG-TCATGGTATGACAGAGGTGCAAAGATCTTTCAAGCTGAAAA 294 Query 302 ATACCGCAAGGGAGCGTGT-ATAAACTGTGGTGCAATGACTCACAGTTCTAAAGCATGTA 360 |||||| |||||||||||| | |||||||||||||||||| || | | ||||||| |||| Sbjct 295 ATACCGAAAGGGAGCGTGTCA-AAACTGTGGTGCAATGACGCATACTGCTAAAGCTTGTA 353 Query 361 TGGATAGACCTCGTAAGATTGGAGCTAAA-TACACAAACATGAACATTGCTGCTGATGAG 419 ||||||| ||||||||| |||| || ||| |||||||||| ||||||||| |||||||| Sbjct 354 TGGATAGGCCTCGTAAGGTTGGGGC-AAAGTACACAAACAAGAACATTGCACCTGATGAG 412 Query 420 AAAATCGAGAGTTTTGAACTTGACTATGATGGGAAGAGGGACAGATGGAACGGTTATGAT 479 ||||| ||||||||||| |||||||| ||||| ||||| ||| ||||||| ||||||||| Sbjct 413 AAAATTGAGAGTTTTGAGCTTGACTACGATGGCAAGAGAGACCGATGGAATGGTTATGAT 472 Query 480 ACTTCAACCTACCGTCATGTGGTAGATCGTTATGATGCTAAAGAGGAGGCACGAAAGAAG 539 |||||||||||| || |||| |||||| |||||| || |||||||| || ||||||||| Sbjct 473 CCTTCAACCTACCATCGTGTGATAGATCTTTATGAAGCAAAAGAGGATGCTCGAAAGAAG 532 Query 540 TATC-TCAAGGAGCAGCAACTTAAGAAACTAGAGGAGAAGAACAATAATGAAAACGGTGA 598 || | | ||||||||||||||||||||||| ||||| ||||||||||| ||||| ||||| Sbjct 533 TA-CTTGAAGGAGCAGCAACTTAAGAAACTGGAGGAAAAGAACAATAACGAAAAAGGTGA 591 Query 599 TGATGCAACCAGTGATGGGGAGGAAGACCTTGACGACTTGAGGGTCGATGAAGCTAAGGT 658 ||| ||||||||||||||||||||||| || ||||| ||||| |||||||| ||||| Sbjct 592 TGAGGCAACCAGTGATGGGGAGGAAGAAGAAGATGACTTAAGGGTTGATGAAGCCAAGGT 651 Query 659 TGATGAGAGTAGGCAAATGGATTTTGCAAAGGTTGAGAAA-CGTGTTCGAACAACTGGTG 717 ||||||||| ||||| |||||||||||||||||||| ||| ||||||||||||||||||| Sbjct 652 TGATGAGAGCAGGCAGATGGATTTTGCAAAGGTTGA-AAAGCGTGTTCGAACAACTGGTG 710 Query 718 GTGGTAGCACAGGAACTGTTAGGAATCTGCGTATCAGAGAAGACACTGCTAAATACCTGT 777 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 711 GTGGTAGCACAGGAACTGTTAGGAATCTGCGTATCAGAGAAGACACTGCAAAATACCTGT 770 Query 778 TGAATCTTGATGTAAACTCAGCTCATTATGACCCTAAAACTCGGTCCATGCGTGAAGATC 837 |||| || ||||| ||||||||||||||||||||||||||||| || ||||||||||| | Sbjct 771 TGAACCTCGATGTCAACTCAGCTCATTATGACCCTAAAACTCGTTCTATGCGTGAAGACC 830 Query 838 CACTTCCAGATGCAGATCCAAATGAAAAATTCTATTTGGGAGATAATCAATATAGAAACA 897 | ||||||||||||||||||||||| || || ||| |||||||||||||||||||||||| Sbjct 831 CGCTTCCAGATGCAGATCCAAATGACAAGTTTTATCTGGGAGATAATCAATATAGAAACA 890 Query 898 GTGGCCAAGCTCTGGAGTTCAAACAGATAAACATCCATTCATGTGAAGCATTTGACAAGG 957 ||||||||||| |||||||||||||| ||||||||||||| || |||||||||||||||| Sbjct 891 GTGGCCAAGCTTTGGAGTTCAAACAGCTAAACATCCATTCGTGGGAAGCATTTGACAAGG 950 Query 958 GACATGACATGCATATGCAAGCGGCTCCATCCCAAGCTGAATTGCTCTATAAGAACTTTA 1017 |||| ||||||||||||||||||||||| || |||||||||||||||||||||| |||| Sbjct 951 GACAGGACATGCATATGCAAGCGGCTCCCTCTCAAGCTGAATTGCTCTATAAGAGCTTTC 1010 Query 1018 AAGTTGCAAAGGAAAAACTGAAAACTCAGACAAAGGACACCATTATGGAAAAGTATGGGA 1077 | ||||| ||||| ||||||||| |||||||||||||||| || ||||| ||||| |||| Sbjct 1011 AGGTTGCGAAGGAGAAACTGAAATCTCAGACAAAGGACACAATCATGGACAAGTACGGGA 1070 Query 1078 ATGCAGCTACAGAAGGTGAAATTCCGATGGAGCTTTTGCTTGGCCAAAGTGAAAGACAAA 1137 ||||||||||||||| ||||||||| ||||||||||||||||| ||||| ||||||||| Sbjct 1071 ATGCAGCTACAGAAGATGAAATTCCAATGGAGCTTTTGCTTGGGCAAAGCGAAAGACAAG 1130 Query 1138 TTGAGTATGA-CAGGGCAGGGAGGATTATGAAGGGACAGGAGGTGATAATT-CCAAAGAG 1195 |||||||||| | | |||||||||||||| |||||||||||||||||| || |||||||| Sbjct 1131 TTGAGTATGATC-GAGCAGGGAGGATTATAAAGGGACAGGAGGTGATA-TTGCCAAAGAG 1188 Query 1196 CAAATATGAAGAAGATGTTCATGCTAACAATCACACAAGTGTTTGGGGATCATGGTGGAA 1255 ||||||||||||||||||||||||||||||||||| ||||| ||||| |||| ||||| Sbjct 1189 TAAATATGAAGAAGATGTTCATGCTAACAATCACACTAGTGTGTGGGGCTCATATTGGAA 1248 Query 1256 AGATCACCAATGGGGATATAAATGTTGCCAGCAGA-CAATTCGCAACAGCTATTGCACAG 1314 |||||| |||||||||||||||||||||||||||| || ||||||| || || ||||||| Sbjct 1249 AGATCATCAATGGGGATATAAATGTTGCCAGCAGATCA-TTCGCAATAGTTACTGCACAG 1307 Query 1315 GTTCTGCTGGAATTGAAGCTGCAGAGGC-GTCCATTGATCTGATGAAGGCTAATATTGCT 1373 |||||||||||||||||||||||||||| | || |||||||||||||||||||||||||| Sbjct 1308 GTTCTGCTGGAATTGAAGCTGCAGAGGCTGCCC-TTGATCTGATGAAGGCTAATATTGCT 1366 Query 1374 CGCAAAGAAGCTTCTAAAGAGAGTCCGAAGAAGGTTGAAGAGAAGAAAATGGCGACATGG 1433 ||||||||||| ||| ||||||| || ||||||||||||||||||| |||||| ||||| Sbjct 1367 CGCAAAGAAGCATCTGAAGAGAGCCCAAAGAAGGTTGAAGAGAAGAGAATGGCCTCATGG 1426 Query 1434 GGAACTGATATTCCTGAAGATTTGGAATTGAACGAGGAGGCACTTGCAAATGCTCTTAAA 1493 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 1427 GGAACTGATATTCCTGAAGATTTGGAATTGAACGAGGAGGCTCTTGCTAATGCTCTTAAA 1486 Query 1494 AAGGAGGATCTAAGTAGGAGGGAAGAAAAAGATGAGAGGAAACGCAAATACAATGTCAAT 1553 ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct 1487 AAGGAGGATCTCAGTAGGAAGGAAGAAAAAGATGAGAGGAAACGTAAATACAATGTCAAA 1546 Query 1554 TACACCAACGATGTGACCTCCG-AGGAGATGGAAGCTTACAGAATGAAGAGAGTTCACCA 1612 |||| |||||||||||| |||| | ||||||||||||||||||||||||||||||||||| Sbjct 1547 TACAACAACGATGTGAC-TCCGGAAGAGATGGAAGCTTACAGAATGAAGAGAGTTCACCA 1605 Query 1613 CGAGGACCCAATGAGAAATTTCCCCGGCTGA 1643 ||||| ||||||||| |||||| ||||||| Sbjct 1606 TGAGGATCCAATGAGAGATTTCCTCGGCTGA 1636 > Ahg937284 jgi|Araly1|937284|scaffold_501475.1 Length=1148 Score = 599 bits (324), Expect = 2e-170 Identities = 460/525 (88%), Gaps = 12/525 (2%) Strand=Plus/Plus Query 653 TAA-GGTTGATGAGAGTAGGCAAATGGATTTTGCAAAGGTTGAGAAACGTGTTCGAACAA 711 ||| |||||||||||| | ||| ||||||||||||||||| | |||||||| ||||||| Sbjct 598 TAAGGGTTGATGAGAGCAAGCAGGTGGATTTTGCAAAGGTTAAAAAACGTGTACGAACAA 657 Query 712 CTGGTGGTGGTAGCACAGGAACTGTTAGGAATCTGCGTATCAGAGAAGACACTGCTAAAT 771 ||| |||||| |||||||||||||| |||||||||||||| |||||||| ||||| |||| Sbjct 658 CTGATGGTGGAAGCACAGGAACTGTAAGGAATCTGCGTATTAGAGAAGATACTGCAAAAT 717 Query 772 ACCTGTTGAATCTTGATGTAAACTCAGCTCATTATGACCCTAAAACTCGGTCCATGCGTG 831 || ||||||| |||||||| ||||||||| |||||||||||||| |||| |||||||||| Sbjct 718 ACTTGTTGAACCTTGATGTTAACTCAGCTTATTATGACCCTAAATCTCGATCCATGCGTG 777 Query 832 AAGATCCACTTCCAGATGCAGATCCAAATGAAAAATTCTATTTGGGAGATAATCAATATA 891 ||||||| || ||||||||| |||||||||| ||||| | |||||||||||||||||||| Sbjct 778 AAGATCCGCTCCCAGATGCAAATCCAAATGAGAAATTTTGTTTGGGAGATAATCAATATA 837 Query 892 GAAACAGTGGCCAAGCTCTGGAGTTCAAACAGA-TAAACATCCATTCATGTGAAGCATTT 950 ||||||||||||||||||| ||||||||||| | ||||||| ||||||||||||||||| Sbjct 838 GAAACAGTGGCCAAGCTCTAGAGTTCAAACA-ACTAAACATGTATTCATGTGAAGCATTT 896 Query 951 GACAAGGGACATGACATGCATATGCAAGCGGCTCCATCCCAAGCTGAATTGCTCT-ATAA 1009 | ||| ||||| ||||| |||||||||||||||||||| |||||||| ||| | | |||| Sbjct 897 GGCAAAGGACAAGACATACATATGCAAGCGGCTCCATCTCAAGCTGAGTTG-TGTTATAA 955 Query 1010 GAACTTTAAAGTTGCAAAGGAAAAACTGAA-AACTCAGACAAAGGACACCATTATGGAAA 1068 || |||| ||| |||||||||||||||| || ||||| ||| ||||| || |||| || Sbjct 956 GAGGGTTAAGGTTACAAAGGAAAAACTGAATAA-TCAGATAAAAGACACAATCATGGCAA 1014 Query 1069 AGTATGGGAATGCAGCTACAGAAGGTGAAATTCCGATGGAGCTTTTGCTTGGCCAAAGTG 1128 ||||||||||||||||| || ||| ||| ||||||||||||||||||||||| ||||| | Sbjct 1015 AGTATGGGAATGCAGCTGCAAAAGATGATATTCCGATGGAGCTTTTGCTTGGGCAAAGCG 1074 Query 1129 AAAGACAAATTGAGTATGA-C-AG--GGCAGGGAGGATTATGAAG 1169 |||||||| |||||||||| | || |||||| |||||||| ||| Sbjct 1075 AAAGACAAGTTGAGTATGATCGAGCAGGCAGG-AGGATTATAAAG 1118 Score = 486 bits (263), Expect = 2e-136 Identities = 460/553 (83%), Gaps = 22/553 (4%) Strand=Plus/Plus Query 33 ATGGCGACGGCTTCAGTTGCTTTTAAGTCTAGGGAAGATCACAGGAAG-AAATTAGAATT 91 |||||||||||||||||||||||||||||||||||||||| |||||| ||| |||||| Sbjct 21 ATGGCGACGGCTTCAGTTGCTTTTAAGTCTAGGGAAGATCGTAGGAAGCAAAA-AGAATT 79 Query 92 AGAGGAAGCTCGTAAAGCTGGTCTCGCTCCTGCTGAGGTAGACGAAGA-TGGCAAAG-AA 149 ||| |||||| | ||||| || || | ||| |||||||||||||| || ||| |||| || Sbjct 80 AGACGAAGCTAGAAAAGCCGGGCTTGTTCCGGCTGAGGTAGACGA-GAATGG-AAAGGAA 137 Query 150 ATCAATCCTCACATACCTGAGTATATGTCAAAAGCTCCATGGTAT-CTCAAGTCTGAACA 208 ||||||||||||||| || ||||| ||| | |||||| ||| | |||||||||| | Sbjct 138 ATCAATCCTCACATAGCTAAGTATTTGTTATCTCCTCCATTCTATGC-CAAGTCTGAAAA 196 Query 209 GCCGAGTTTGAAGCATCaaaaaaaTTGGAAAATTGAACCCGAACCCA-AAAAG-ATATGG 266 |||||||||||||||||||| |||||||||| | |||||| ||| ||||| |||| Sbjct 197 ACCGAGTTTGAAGCATCAAAAGAATTGGAAAACTAAACCCGTTTCCACAAAAGCATAT-- 254 Query 267 TATGATAGAGGTAAAAAGATCT-ATCAAGCTGAACAATACCGCAAGGGAGCGTGT-ATAA 324 ||||| |||||| ||||| || ||||||| ||| |||| ||||| ||||||||| | || Sbjct 255 TATGACAGAGGTGCAAAGA-CTTATCAAGCCGAAAAATATCGCAAAGGAGCGTGTCA-AA 312 Query 325 ACTGTGGTGCAATGACTCACAGTTCT-AAAGCATGTATGGATAGACCTCGTAAGATTGGA 383 |||||||||||||||| || | | | ||| ||||||| || |||||||||||| |||| Sbjct 313 ACTGTGGTGCAATGACACAT-GATATGAAAACATGTATAGAAAGACCTCGTAAGGTTGGT 371 Query 384 GCTAAATACACAAACATGAACATTGCTGCTGATGAGAAAATCGAGAGTTTTGAACTTGAC 443 || ||||||||||||| ||||||||| ||||||||||||| |||||| ||||| |||| Sbjct 372 GCAAAATACACAAACAAGAACATTGCACCTGATGAGAAAATTGAGAGTCTTGAATTTGAT 431 Query 444 TATGATGGGAAGAGGGACAGATGGAACGGTTATGATACTTCAACCTACCGTCATGTG-GT 502 |||||||| ||||| ||| ||||||| ||||||||| |||| | || ||||||||| | Sbjct 432 TATGATGGTAAGAGAGACCGATGGAATGGTTATGATCCTTCGTCTTATCGTCATGTGAG- 490 Query 503 AGATCGTTATGATGCTAAAGAGGAGGCACGAAAGAAGTATCTC-AAGGAGCAGCAACTTA 561 ||||| |||||| || |||||| | |||||| |||| || || |||||||| ||||||| Sbjct 491 AGATCTTTATGAAGCAAAAGAGAATGCACGAGAGAATTA-CTTGAAGGAGCAACAACTTA 549 Query 562 AGAAACTAGAGGA 574 ||||||||||||| Sbjct 550 AGAAACTAGAGGA 562 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 68105358060 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5