BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G37370.1
Length=1663
Score E
Sequences producing significant alignments: (Bits) Value
Ahg490885 jgi|Araly1|490885|fgenesh2_kg.7__318__AT4G37370.1 2300 0.0
Ahg490888 jgi|Araly1|490888|fgenesh2_kg.7__321__AT4G37320.1 538 5e-152
Ahg490886 jgi|Araly1|490886|fgenesh2_kg.7__319__AT4G37340.1 224 2e-57
Ahg490879 jgi|Araly1|490879|fgenesh2_kg.7__312__AT4G37410.1 76.8 5e-13
Ahg490876 jgi|Araly1|490876|fgenesh2_kg.7__309__AT4G37430.1 67.6 3e-10
> Ahg490885 jgi|Araly1|490885|fgenesh2_kg.7__318__AT4G37370.1
Length=1539
Score = 2300 bits (1245), Expect = 0.0
Identities = 1427/1516 (94%), Gaps = 7/1516 (0%)
Strand=Plus/Plus
Query 23 AAACATGGAAACCAAAACCCTAATTTTCTCAATTCTCTTCGTTGTTCTCTCTCTCA-TTT 81
||||||||||| ||||| |||||||| ||||||||||||| || || ||||||||| ||
Sbjct 1 AAACATGGAAATCAAAATCCTAATTTCCTCAATTCTCTTCATTATTATCTCTCTCAGATT 60
Query 82 ACTTAATTGGAAAACTCA-AGCGAAAGCCAAATCTACCTCCGAGTCCGGCATGGTCATTA 140
||| || |||||| ||| | |||||||||||||| |||||||||||||||||||| |||
Sbjct 61 -CTTGATCGGAAAAATCATA-CGAAAGCCAAATCTTCCTCCGAGTCCGGCATGGTCGTTA 118
Query 141 CCGGTGATTGGTCATCTCCGCCTTCTCAAACCACCGATTCATCGCACATTCCTCTCCCTC 200
|||||||||||||||||||| || ||||||||||||||| ||||||| ||||| || ||
Sbjct 119 CCGGTGATTGGTCATCTCCGTCTCCTCAAACCACCGATTTATCGCACTTTCCTTTCACTT 178
Query 201 TCTCAATCCCTAAACAATGCTCCGATCTTCTCCCTCCGACTCGGTAACCGACTCGTTTTC 260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 179 TCTCAATCCCTAAACAATGCTCCGATCTTCTCCCTCCGACTCGGTAACCGACTCGTTTTC 238
Query 261 GTGAACTCGTCACACTCGATCGCCGAGGAATGTTTCACCAAAAACGACGTCGTACTGGCG 320
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 239 GTGAACTCGTCGCACTCGATCGCCGAGGAATGTTTCACCAAGAACGACGTCGTACTCGCA 298
Query 321 AACAGACCAAACTTCATCCTCGCTAAACACGTTGCGTACGATTACACAACCATGATCGCA 380
||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 299 AACCGGCCAAACTTCATCCTCGCTAAACACGTCGCGTACGATTACACAACCATGATCGCA 358
Query 381 GCTTCCTACGGTGACCACTGGCGTAACCTCCGCCGCATCGGCTCCGTCGAGATATTCTCC 440
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 359 GCTTCTTACGGTGACCACTGGCGTAACCTCCGCCGCATCGGCTCCGTCGAGATATTCTCC 418
Query 441 AATCACCGTCTCAATAGCTTTTTGTCTATTCGTAAAGACGAGATCCGACGACTTGTGTTT 500
|||||||| || || |||||| | ||| ||||||||||||||||||| ||||||||||||
Sbjct 419 AATCACCGGCTTAACAGCTTTCTATCTGTTCGTAAAGACGAGATCCGGCGACTTGTGTTT 478
Query 501 CGTCTTTCTCGGAACTTTTCACAAGAGTTTGTGAAAGTGGATATGAAATCAATGTTATCT 560
||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||
Sbjct 479 CGTCTTTCTCGGAACTTTTCACAAGAGTTTGTGAAGGTGGAGATGAAATCGATGTTATCT 538
Query 561 GACTTAACATTCAACAACATTTTAAGAATGGTGGCCGGAAAACGTTACTACGGAGACGGT 620
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 539 GACTTAACATTCAACAACATTATAAGAATGGTGGCCGGAAAACGTTACTACGGAGACGGT 598
Query 621 GTTGAGGATGATCCGGAGGCTAAACGTGTCCGGCAGCTTATAGCGGATGTGGTGGCTTGT 680
|||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct 599 GTTGAGGATGATCCGGAGGCTAAACGAGTCCGGCAGCTTATTGCGGATGTGGTAGCTTGT 658
Query 681 GCTGGTGCTGGAAACGCTGTTGATTACTTACCGGTTTTGCGGTTGGTTTCAGATTACGAG 740
|||||||| ||||||||||||||||| |||||| |||||||||| || ||||||||||||
Sbjct 659 GCTGGTGCCGGAAACGCTGTTGATTATTTACCGATTTTGCGGTTAGTCTCAGATTACGAG 718
Query 741 ACACGGGTTAAGAAGTTGGCGGGTAGGCTCGACGAGTTCTTGCAAGGATTGGTTGATGAG 800
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 719 ACACGGGTTAAGAAGTTGGCGGGTAGGCTCGACGAGTTCTTGCAAGGATTGGTTGACGAG 778
Query 801 AAACGAGAAGCTAAGGAGAAAGGAAACACTATGATCGATCACTTGCTTACTCTGCAAGAA 860
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct 779 AAACGAGAAGCTAAGGAGAAAGGAAACACGATGATCGATCACTTGCTTACTCTCCAAGAA 838
Query 861 TCCCAACCGGATTACTTCACGGATCGTATCATTAAAGGAAACATGCTCGCTTTGATACTA 920
|||||||||||||||||||| ||||||||||| |||||||||||||| | ||||||||||
Sbjct 839 TCCCAACCGGATTACTTCACTGATCGTATCATCAAAGGAAACATGCTTGGTTTGATACTA 898
Query 921 GCAGGGACCGACACATCAGCGGTTACGTTAGAATGGGCATTGTCGAACGTGTTGAACCAT 980
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 899 GCAGGGACCGACACATCAGCGGTTACGTTAGAATGGGCATTGTCGAACCTGTTGAACCAT 958
Query 981 CCGGATGTATTGAACAAGGCGAGAGATGAAATCGATAGAAAGATAGGTTTAGACAGGCTT 1040
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 CCGGAGGTATTGAACAAGGCGAGAGATGAAATCGATAGAAAGATAGGTTTAGACAGGCTT 1018
Query 1041 ATGGATGAATCAGATATCTCAAACCTGCCTTATCTCCAAAACATTGTGTCTGAAACGTTG 1100
||||| |||||||| |||||||| ||||| ||||||||||||||||| ||||||||||||
Sbjct 1019 ATGGACGAATCAGACATCTCAAATCTGCCATATCTCCAAAACATTGTATCTGAAACGTTG 1078
Query 1101 CGCCTTTATCCTGCGGCTCCCATGCTTCTTCCTCACGTTGCCTCGGAAGATTGTAAAGTT 1160
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1079 CGCCTTTATCCTGCGGTTCCCATGCTTCTTCCTCACGTTGCCTCGGAGGATTGTAAAGTT 1138
Query 1161 GCAGGATACGATATGCCGCGTGGCACGATACTATTGACCAATGTGTGGGCTATACACAGA 1220
|||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct 1139 GCAGGATATGATATGCCGCGTGGCACGATGCTATTGACCAATGCATGGGCTATACACAGA 1198
Query 1221 GATCCTCAGCTATGGGATGATCCAATGAGCTTCAAGCCAGAGAGGTTTGAGAAAGAAGGA 1280
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1199 GATCCTCGGCTATGGGATGATCCAATGAGCTTCAAGCCAGAGAGGTTTGAGAAAGAAGGA 1258
Query 1281 GAAGCTCAGAAGCTAATGCCGTTTGGGTTAGGAAGAAGGGCGTGTCCTGGTTCTGGACTG 1340
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1259 GAGGCTCAGAAGCTAATGCCGTTTGGGTTAGGAAGAAGGGCGTGTCCTGGTTCTGGACTG 1318
Query 1341 GCTCATCGGCTTATAAACCTGACTCTTGGATCATTGATTCAGTGTTTGGAATGGGAGAAG 1400
||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||| |
Sbjct 1319 GCTCATCGGCTAATAAACCTGACTATTGGATCATTGATTCAGTGTTTGGAATGGAAGAGG 1378
Query 1401 ATTGGAGA--A-GAAGTGGATATGAGTGAAGGCAAAGGTGTTACAATGCCTAAAGCCAAG 1457
|||||||| | |||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 1379 ATTGGAGATGAAGAAGTGGATATGAGTGAAGGCAAAGGACTTACAATGCCTAAAGCCATG 1438
Query 1458 CCTTTGGAAGCCATGTGCAGAGCACGTCCCTCTGTTGTTAAAATCTTCAACGAGTCCGTT 1517
||| | ||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |
Sbjct 1439 CCTCTCGAAGCCATGTGCAGAGCACGTGCCTCTGTTGTTAAACTCTTCAACGAGGCCGCT 1498
Query 1518 TGACGTTTAGACTTTT 1533
|||| |||||||||||
Sbjct 1499 TGACTTTTAGACTTTT 1514
> Ahg490888 jgi|Araly1|490888|fgenesh2_kg.7__321__AT4G37320.1
Length=1553
Score = 538 bits (291), Expect = 5e-152
Identities = 1083/1452 (75%), Gaps = 108/1452 (7%)
Strand=Plus/Plus
Query 103 GAAAGCCAAATCTACCTCCGAGTCCGGCATGGTCATTACCGGTGATTGGTCATCTCCGCC 162
|||| || ||||| ||||| |||||| | | |||||||| || || || |||| ||
Sbjct 118 GAAA-CCTAATCTTCCTCCTTCTCCGGCTTACCCTTTACCGGTTATCGGCCACCTCCACC 176
Query 163 TTCTCAAACCACCGATTCATCGCACATTCCTCTCCCTCTCTCAATCCCT-AAACAATGCT 221
||||||| | |||| | || || |||||||||||| ||||||| ||||| | | ||||||
Sbjct 177 TTCTCAAGCAACCGGTCCACCGAACATTCCTCTCCATCTCTCAGTCCCTCAGA-AATGCT 235
Query 222 CCGATCTTCTCCCTCCGACTCGGTAACCGACTCGTTTTCGTGAACTCGTCACACTCGATC 281
|||||||||| |||||| || || ||||| ||||||| ||| | ||| ||||| || ||
Sbjct 236 CCGATCTTCTACCTCCGCCTGGGAAACCGCCTCGTTTACGTTATCTCCTCACATTCTATA 295
Query 282 GCCGAGGAATGTTTCACCAAAAACGACGTCGTACTGGCGAA-CAGACCAAACT-TCATCC 339
||||| |||||||||||||||||||||||||| || ||||| | | || | | |||||
Sbjct 296 GCCGAAGAATGTTTCACCAAAAACGACGTCGTTCTTGCGAATC-GTCCTGA-TATCATCA 353
Query 340 TCGCTAAACACGT-TGCGTACGA--TTACACAACCATGATCGCAGCTTCC-TACGGTGAC 395
| || |||||||| || || | |||| ||| ||||| ||||| || ||||| |||
Sbjct 354 TGGCCAAACACGTCGGC-TATAACTTTAC-CAA-TATGATTGCAGC-ACCTTACGGCGAC 409
Query 396 CACTGGCGTAACCTCCGCCGCATCGGCTCCGTCGAGATATTCTCCAATCACCGTCTCAAT 455
||||||||||||||||||||||||| | |||||||||| || || ||| | ||| |
Sbjct 410 CACTGGCGTAACCTCCGCCGCATCGCCGCCGTCGAGATTTTTTCTTCTCATAGAATCAGT 469
Query 456 AGCTTTTT-GTCTATTCGTAAAGACGAGATCCGACGACTTGTGTTTCGTCTTTCTCG-GA 513
| ||||| |||||| |||||||||||||||||||| || | | ||| ||| | ||
Sbjct 470 A-CTTTTAAGTCTATCCGTAAAGACGAGATCCGACGGCTCATAACACTTCTCTCTAGAGA 528
Query 514 ACTT-TTCACAAG-AGTTTGT-GAAAGTGGA-TATGAAATCAATGTTATCTGACTTAACA 569
|| || ||| | | ||||| ||| ||||| | |||||||| | ||| | |||| ||
Sbjct 529 -CTCCTT-ACACGGA-TTTGTTGAA-GTGGAGT-TGAAATCATTATTAGCCAACTTGGCA 583
Query 570 TTCAACAACATTTTAA-GAATGGTGGCCGGAAAACGTTACTACGG-AGACGGTGTTGAGG 627
||||||||||| | | || |||| |||||||| || || ||||| || |||| || |
Sbjct 584 TTCAACAACATCATCATGA-TGGTAGCCGGAAAGCGATATTACGGTAG-CGGTACAGAAG 641
Query 628 ATGATCCGGAGGCTAAACGT-GTCCGGCAGCTTATAGCGGATGTGGTGGCTTGTGCTGGT 686
| || || || || | | || || | |||||| |||| || ||| | | || ||
Sbjct 642 ACAATGATGAAGCCAAGC-TCGTGAGGGAACTTATATCGGAGGTAGTGACCGGCGCCAGT 700
Query 687 GCTGGAAACGCTGT-TGATTA-CTTACCGGTTTTGCGGTTGGTTT-CAGA-TTACGAGAC 742
|||| || || ||| || ||| ||| | | |||| | || | || ||||
Sbjct 701 TCTGGCAATT-TGGCTGACTATCTT-CCGATCATAAA-TTGGGTCACAAACTTT-GAGA- 755
Query 743 ACGGGTT-AAGAAGTTGGCGGG-TAGGCTCGAC-GAGTTCTTGCAAGGATTGGTTGATGA 799
|| | |||| |||| || | | ||||| || ||| ||||| | ||||||||||
Sbjct 756 ACCAGACCAAGATTTTGG-GGAATCGACTCGATAGA-TTCCTGCAAAAACTGGTTGATGA 813
Query 800 GAAACGAGAAGCTAAGGAGAAAGGA--AACACTATGATCGATCACTTGCTTACTCTGCAA 857
|||||| | || || || ||||| || ||| ||||| |||| |||||| || | |||
Sbjct 814 GAAACGTGCAGAGAAAGA-AAAGGGTCAA-ACTTTGATCAATCATTTGCTTTCTTTCCAA 871
Query 858 GAATCCCAACCGGATTACT-TCACGGATCGT-ATCATTAAAGGAAACATGCTCGCTTTGA 915
||| || |||| ||||||| | || ||| || ||||| ||||||| ||| |||||| ||
Sbjct 872 GAAACCGAACCCGATTACTAT-ACTGAT-GTCATCATCAAAGGAATCATACTCGCTCTGG 929
Query 916 TACTAGCAGGGACCGACACATCAGCGGTTACGTTAGAATGGGCATTGTCGAACGTGTTGA 975
|||| || ||||| || ||||| || || ||||| ||||||||| |||| || ||||||
Sbjct 930 TACTTGCGGGGACAGATACATCTGCAGTGACGTTGGAATGGGCAATGTCAAATTTGTTGA 989
Query 976 ACCATCC-GG-ATGTATTGA-ACAAGGCGAGAGATGAAATCGATAGAAAGA-TAGGTTTA 1031
| ||||| || || |||| | ||| |||||| ||||||||| |||| | | |||| |
Sbjct 990 ATCATCCAGGGATAC-TTGAGA-AAG-CGAGAGCGGAAATCGAT-GAAAAAATCGGTTCA 1045
Query 1032 GACAGGCTTA-TGGATGAATCAGATATCTC-AAACCTGCC-TTATCTCCAAAACATTGTG 1088
||| || ||| | || |||||||| || | ||| || || |||||||||||||||||||
Sbjct 1046 GACCGG-TTAGTTGAAGAATCAGACAT-TGGAAATCT-CCATTATCTCCAAAACATTGTG 1102
Query 1089 TCTGAAACGTTGCGCCTT-TATCCTGCGGCTCC-CATGCTTCTTCCTCACGTTGC-C-TC 1144
|| ||||| | || || |||||||||| ||| | | || || ||||| || | | ||
Sbjct 1103 TCGGAAACACTACGT-TTGTATCCTGCGGTTCCAC-TACTACTCCCTCAT-TT-CTCATC 1158
Query 1145 GGAAGATTGTAAAGTTGCAGGATACGATATGCCGCGTGGCACGATACTATTGACCAATGT 1204
||| || |||||||| || || ||||||||||| ||| ||||| | |||| || || ||
Sbjct 1159 GGATGAATGTAAAGTGGCGGGCTACGATATGCCACGTCGCACGTTGTTATTAACAAACGT 1218
Query 1205 GTGGGCTATACACAGAGATCCTCAGCT--ATGGGATGATCCA-ATGAGCTTCAAGCCAGA 1261
||||| || || |||||||| || | |||||| || ||| | ||| ||||| || ||
Sbjct 1219 ATGGGCGATGCATAGAGATCC--AGGTTTATGGGAAGAGCCAGA-GAGGTTCAAACCGGA 1275
Query 1262 GAGGTTTGAGAAAGAAGGAGA-AGCTCAGAA-GCTAATGCCGTTTGGGTTAGGAAGAAGG 1319
|||||| |||||||||||||| | ||| ||| |||||||||||||||| | ||| || |
Sbjct 1276 GAGGTTCGAGAAAGAAGGAGAGA-CTC-GAAAGCTAATGCCGTTTGGGATGGGACGACGA 1333
Query 1320 GCGTGTCCTGGTTCTG-GACT-GGCTCATCGGCTTA-TAAACCT-GACTCTTGGATCATT 1375
|| |||||||| | | | || || | ||| ||| ||| || | || |||| | ||
Sbjct 1334 GCTTGTCCTGGAGCCGAG-CTTGGGA-AGCGG-TTAGTAAGTCTTG-CTATTGGCTGTTT 1389
Query 1376 GATTCAGTGTTTGGAATGGGAGA-AGATTGGAGAAGAA---GTGGATATGAGTGAAGGCA 1431
|||||||||||| || ||||||| || |||| |||||| ||||| |||| |||||||
Sbjct 1390 GATTCAGTGTTTCGAGTGGGAGAGAG-TTGGTGAAGAACTTGTGGACATGACTGAAGGCG 1448
Query 1432 AAGGTGTT-ACAATGCCTAAAGCCAAGCCTTTG-GAAGCCATGTGCAGAG-CACGTCCC- 1487
|||| | | || ||||||||||| | || ||| || || ||||||| || ||||| ||
Sbjct 1449 AAGG-GATCACTATGCCTAAAGCTACTCCGTTGCGA-GCTATGTGCA-AGGCACGTGCCG 1505
Query 1488 TCTGTTGTTAAA 1499
| ||||| ||||
Sbjct 1506 T-TGTTGGTAAA 1516
> Ahg490886 jgi|Araly1|490886|fgenesh2_kg.7__319__AT4G37340.1
Length=1336
Score = 224 bits (121), Expect = 2e-57
Identities = 307/395 (78%), Gaps = 20/395 (5%)
Strand=Plus/Plus
Query 138 TTACCGGTGATTGGTCATCTCCGCCTTCTCAAACCACCGATTCATC-GCACATTCCTCTC 196
||||||||||||||||| |||||||||||||| |||||| | || | | ||||||||
Sbjct 4 TTACCGGTGATTGGTCACCTCCGCCTTCTCAAGCCACCGCTCCA-CGGGGTTTTCCTCTC 62
Query 197 CCTCTCTCAATCCCTAAACAATGCTCCGATCTTCTCCCTCCGACTCGGTAACCGACTCGT 256
| |||| ||||||||| | | |||||||| |||||||||| || || |||||||| ||
Sbjct 63 CGTCTCGCAATCCCTAGGCGACACTCCGATCATCTCCCTCCGTCTTGGCAACCGACTGGT 122
Query 257 TTTCG-TGAACTCGTCACACTCGATCGCCGAGGAATGTTTCACCAAAAACGACGTCGTAC 315
||||| || ||| |||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 123 TTTCGTTG-TCTCTTCACACTCGATCGCCGAGGAATGTTTCACCAAGAACGATGTCGTAC 181
Query 316 TGGCGAACAGACCA-AACTTCATCCTCGCT--AAA-CACGT-TGCGTACGATTACACAAC 370
| |||||| | | |||| | ||| ||| ||| ||| | | | || | | ||| ||
Sbjct 182 TCGCGAACCG-CTTTAACT-C--CCTTGCTTCAAAACACATCT-CATATGGCTGCACCAC 236
Query 371 CATGATCGCAGCTTCCTACGGTGACCACTGGCGTAACCTCCGCCGCATCGGC-TCCGTCG 429
| || | ||||||| ||| | ||||||||| | || ||||| | ||| ||| | || |
Sbjct 237 CGTGGTTACAGCTTCGTACAGCGACCACTGGAGAAATCTCCGACACATTGGCGTT-GTTG 295
Query 430 AGATATTCTCCAATCACCGTCTCAATAGCTTTTTGTCTATTCGTAAAGACGAGATCC-GA 488
|||||||||| |||||| ||||||||||||| ||||| || ||||||||||| |
Sbjct 296 AGATATTCTCGGCTCACCGGCTCAATAGCTTTTCATCTATCCGCCGAGACGAGATCCAG- 354
Query 489 CGACTTGTGT-TTCGTCTTTCTCGGAACTTTTCAC 522
|| ||| | || |||| || ||||||| |||||
Sbjct 355 CGGCTTATAACTT-GTCTCTCACGGAACTCTTCAC 388
> Ahg490879 jgi|Araly1|490879|fgenesh2_kg.7__312__AT4G37410.1
Length=1641
Score = 76.8 bits (41), Expect = 5e-13
Identities = 81/100 (81%), Gaps = 4/100 (4%)
Strand=Plus/Plus
Query 343 CTAAACACGTTGCGTACGATTACACAACCAT-G-ATCGCAGCTTCCTACGGTGACCACTG 400
||||| | || || ||| | ||||||||||| | | | || | || ||||||||||||||
Sbjct 379 CTAAATATGTCGCTTACAACTACACAACCATCGCAAC-CA-CATCTTACGGTGACCACTG 436
Query 401 GCGTAACCTCCGCCGCATCGGCTCCGTCGAGATATTCTCC 440
|||||||||||||||||| ||||| |||| || |||||
Sbjct 437 GCGTAACCTCCGCCGCATTTGCTCCCTCGAAATCGTCTCC 476
> Ahg490876 jgi|Araly1|490876|fgenesh2_kg.7__309__AT4G37430.1
Length=1637
Score = 67.6 bits (36), Expect = 3e-10
Identities = 54/62 (87%), Gaps = 4/62 (6%)
Strand=Plus/Plus
Query 379 CAGCTTCC-TACGGTGACCACTGGCGTAACCTCCGCCGCATCGGCTCCGTCGAGATATTC 437
|||| ||| |||||||||||||||||||||||||||||||| |||| || ||| ||||
Sbjct 421 CAGC-TCCTTACGGTGACCACTGGCGTAACCTCCGCCGCATTTGCTC--TCAAGAGATTC 477
Query 438 TC 439
||
Sbjct 478 TC 479
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 62353731065
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5