BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G37390.1
Length=2131
Score E
Sequences producing significant alignments: (Bits) Value
Ahg490882 jgi|Araly1|490882|fgenesh2_kg.7__315__AT1G59500.1 2793 0.0
Ahg475364 jgi|Araly1|475364|fgenesh2_kg.2__494__AT4G37390.1 2505 0.0
Ahg481188 jgi|Araly1|481188|fgenesh2_kg.4__248__AT2G23170.1 1327 0.0
> Ahg490882 jgi|Araly1|490882|fgenesh2_kg.7__315__AT1G59500.1
Length=1812
Score = 2793 bits (1512), Expect = 0.0
Identities = 1713/1813 (94%), Gaps = 2/1813 (0%)
Strand=Plus/Plus
Query 66 ATGGCCGTTGATTCACCTCTTCAATCTCGGATGGTTTCAGCGACGACTTCTGAGAAAGAT 125
|||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 1 ATGGCCGTTGATTCGCCTCTTCAATCTCGGATGGTTTCACCGACGACCTCTGAGAAAGAT 60
Query 126 GTGAAAGCTCTCAAGTTCATTGAAGAAATGACTCGGAACCCTGACTCGGTTCAAGAGAAG 185
||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| |||
Sbjct 61 GTGAAGGCTCTCAAGTTCATTGAGGAGATGACTCGGAACCCTGACTCGGTTCAAGAAAAG 120
Query 186 GTTCTTGGAGAGATACTGACTCGTAACTCTAACACCGAATATCTGAAACGGTTCGATCTT 245
||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||| |
Sbjct 121 GTTCTTGGAGAGATACTAAGTCGTAACTCGAACACCGAATATCTGAAACGGTTCGATATC 180
Query 246 GATGGTGTCGTTGATCGGAAAACGTTCAAGAGCAAAGTTCCGGTGGTTACGTACGAAGAT 305
|||| | | |||||||||| |||||||||| |||||||||||||||||| |||||||||
Sbjct 181 AATGGGGCCATTGATCGGAATACGTTCAAGAACAAAGTTCCGGTGGTTACTTACGAAGAT 240
Query 306 TTGAAGCCGGAGATTCAACGTATATCCAACGGCGATTGTTCTCCGATCTTGTCTTCTCAC 365
|| ||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||
Sbjct 241 TTAAAGCCGGAGATTCAACGTATATCCAACGGTGATCGTTCTCCGATCTTGTCCTCTCAC 300
Query 366 CCCATCACCGAGTTTCTCACAAGCTCAGGAACATCTGCTGGTGAGAGGAAACTAATGCCA 425
|||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 301 CCCATCACCGAGTTTCTCACAAGCTCTGGAACATCTGCTGGTGAGAGGAAATTAATGCCG 360
Query 426 ACAATTGAAGAAGACTTAGACCGACGTCAGCTTTTATACAGTCTTCTCATGCCTGTGATG 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 ACAATTGAAGAAGACTTAGACCGACGTCAGCTTTTATACAGTCTTCTCATGCCTGTGATG 420
Query 486 AATCTCTACGTGCCGGGATTAGACAAAGGCAAAGGGTTATACTTCTTATTCGTGAAGTCG 545
||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 421 AATCTGTACGTGCCGGGATTAGACAAAGGCAAAGGCTTATACTTCTTATTTGTGAAGTCG 480
Query 546 GAGTCAAAGACGTCAGGTGGGTTACCGGCTCGTCCGGTTCTCACGAGTTATTACAAAAGC 605
||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 481 GAGTCTAAGACGTCAGGTGGGTTACCGGCTCGTCCAGTTCTCACGAGTTACTACAAAAGC 540
Query 606 GACCACTTCAAGAGACGACCGTACGATCCGTACAACGTCTACACTAGTCCTAACGAAGCC 665
|||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 541 GACCACTTCAGGAGGCGACCGTACGATCCGTACAACGTCTACACTAGTCCTAACGAAGCC 600
Query 666 ATCCTCTGCTCCGACTCGTCCCAAAGCATGTATGCTCAAATGCTATGTGGTCTCTTAATG 725
||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||
Sbjct 601 ATCCTCTGCTCCGACTCTTCTCAAAGCATGTATGCTCAAATGCTATGTGGTCTATTAATG 660
Query 726 CGCCATGAAGTTCTCCGACTCGGCGCAGTGTTTGCTTCCGGTCTCCTCCGTGCCATAAGC 785
|||||||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||||
Sbjct 661 CGCCATGAAGTTCTCCGACTAGGCGCCGTGTTTGCTTCAGGTCTCCTCCGTGCCTTAAGC 720
Query 786 TTCCTCCAGAACAATTGGAAGGAACTTGCTCGTGATATCTCAACCGGAACCCTAAGTTCT 845
|| ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 721 TTTCTCCAGAACAATTGGAAGGAACTTGCTCGAGATATCTCAACGGGAACCCTAAGTTCT 780
Query 846 CGAATCTTCGATCCTGCCATTAAAAACCGCATGTCCAAGATTTTGACCAAACCTGATCAA 905
|||||||||||||| | ||||||||||||||||| |||||||||| |||||||||||||
Sbjct 781 AGAATCTTCGATCCTACGATTAAAAACCGCATGTCAAAGATTTTGATCAAACCTGATCAA 840
Query 906 GAACTGGCTGAGTTTTTGGTTGGGGTTTGTTCACAAGAGAATTGGGAAGGGATAATCACA 965
||||| |||||||||||| |||| |||||||| ||||||| |||||||||||||||||||
Sbjct 841 GAACTTGCTGAGTTTTTGATTGGTGTTTGTTCGCAAGAGAGTTGGGAAGGGATAATCACA 900
Query 966 AAGATATGGCCTAACACGAAGTACCTCGACGTGATTGTTACTGGAGCAATGGCTCAGTAT 1025
|||||||||||||||||||||||||| || |||||||||||||| || ||||||||||||
Sbjct 901 AAGATATGGCCTAACACGAAGTACCTTGATGTGATTGTTACTGGTGCGATGGCTCAGTAT 960
Query 1026 ATCCCGACGTTGGAGTACTATAGCGGTGGATTACCGATGGCTTGCACGATGTATGCTTCG 1085
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||
Sbjct 961 ATCCCGACGTTGGAGTACTATAGCGGCGGATTACCGATGGCTTGCACAATGTATGCTTCG 1020
Query 1086 TCCGAAAGTTATTTCGGGATTAACCTAAAGCCGATGTGTAAACCCTCGGAGGTTTCTTAC 1145
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1021 TCCGAAAGTTACTTCGGGATTAACCTAAAGCCGATGTGTAAACCCTCAGAGGTTTCTTAC 1080
Query 1146 ACAATCATGCCAAACATGGCCTACTTTGAATTCCTCCCACATAATCACGATGGAGATGGA 1205
||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1081 ACAATCATGCCCAACATGGCCTACTTCGAATTTCTCCCACATAATCACGATGGAGATGGA 1140
Query 1206 GCAGCAGAAGCATCATTAGACGAAACGTCACTTGTGGAGCTTGCTAATGTTGAGGTAGGA 1265
||| |||||||||||||||||||||| |||||||| ||||| ||| |||||||||| |||
Sbjct 1141 GCAACAGAAGCATCATTAGACGAAACCTCACTTGTAGAGCTAGCTGATGTTGAGGTCGGA 1200
Query 1266 AAAGAGTACGAACTCGTGATCACGACCTACGCGGGGCTCTACCGTTACAGAGTTGGCGAC 1325
|||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1201 AAAGAGTATGAACTCGTGATCACAACCTACGCGGGGCTCTACCGTTACAGAGTTGGCGAC 1260
Query 1326 ATTCTTCGTGTCACGGGGTTCCATAATTCCGCTCCACAGTTCAAATTCATACGGAGAAAG 1385
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1261 ATTCTCCGTGTCACGGGGTTCCATAATTCCGCTCCACAGTTCAAATTCATACGAAGAAAG 1320
Query 1386 AATGTTCTGCTAAGCGTAGAATCCGATAAAACCGACGAGGCTGAGCTACAAAAAGCAGTG 1445
|||||| || ||||| | ||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1321 AATGTTTTGTTAAGCATCGAATCCGATAAAACCGACGAGGCTGAGCTACAAAAGGCAGTG 1380
Query 1446 GAGAATGCGTCGAGGTTGTTTGCAGAGCAAGGAACACGTGTGATCGAGTACACAAGCTAC 1505
|||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1381 GAGAATGCGTCGCGGTTGTTTGCAGAGCAAGGAACACGTGTGATCGAGTACACGAGCTAC 1440
Query 1506 GCAGAAACGAAGACTATACCGGGTCATTACGTAATCTACTGGGAGCTACTTGGTAGAGAT 1565
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 GCAGAAACGAAGACTATACCGGGTCATTACGTAATCTACTGGGAGCTACTTGGTAGAGAC 1500
Query 1566 CAAAGCAATGCTCTTA-TGAGCGAAGAAGTCATGGCTAAGTGCTGTTTGGAGATGGAGGA 1624
||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct 1501 CAAAGCAATGCTCTTCCT-AGCGAAGAAGTCATGGCTAAGTGCTGTTTGGAGATGGAGGA 1559
Query 1625 ATCTTTAAACTCGGTTTATAGACAAAGCCGGGTCGCTGATAAATCGATCGGCCCGTTGGA 1684
||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1560 ATCCCTAAACTCGGTTTATAGACAAAGCCGGGTCGCTGATAAATCGATCGGTCCATTGGA 1619
Query 1685 GATACGTGTGGTACGGAACGGTACGTTTGAGGAGCTCATGGACTATGCCATCTCGAGAGG 1744
||||||||| || | |||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1620 GATACGTGTAGTGCAAAACGGTACGTTTGAGGAGCTTATGGACTATGCCATCTCGAGAGG 1679
Query 1745 CGCATCGATTAATCAGTATAAGGTACCGAGGTGCGTGAGCTTCACACCTATCATGGAGCT 1804
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||
Sbjct 1680 CGCATCGATTAATCAGTATAAGGTCCCGAGGTGCGTGAGCTTCACACCGATCATGGAACT 1739
Query 1805 GCTTGACTCTAGAGTTGTGTCTGCTCATTTCAGCCCTTCGTTGCCGCATTGGTCACCAGA 1864
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 1740 GCTTGACTCTAGAGTTGTGTCTGCTCATTTCAGCCCTTCATTGCCGCACTGGTCACCAGA 1799
Query 1865 ACGACGTCGTTAG 1877
|||||||||||||
Sbjct 1800 ACGACGTCGTTAG 1812
> Ahg475364 jgi|Araly1|475364|fgenesh2_kg.2__494__AT4G37390.1
Length=1806
Score = 2505 bits (1356), Expect = 0.0
Identities = 1674/1827 (92%), Gaps = 24/1827 (1%)
Strand=Plus/Plus
Query 66 ATGGCCGTTGATTCACCTCTTCAATCTCGGATGGTTTCAGCGACGACTTCTGAGAAAGAT 125
|||||||||||||| ||||||||||||||||| | |||| ||||||| || ||||||||
Sbjct 1 ATGGCCGTTGATTCGCCTCTTCAATCTCGGATAGCTTCACCGACGACATCCGAGAAAGAC 60
Query 126 GTGAAAGCTCTCAAGTTCATTGAAGAAATGACTCGGAACCCTGACTCGGTTCAAGAGAAG 185
|||| ||||||| ||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 61 ATGAAGGCTCTCATGTTCATTGAGGAGATGACTCGGAACCCTGACTCGGTTCAAGAGAAG 120
Query 186 GTTCTTGGAGAGATACTGACTCGTAACTCTAACACCGAATATCTGAAACGGTTCGATCTT 245
||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||||
Sbjct 121 GTTCTTGGAGAGATACTAAGTCGTAACTCGAACACCGAATATCTGAAACGGTTCGATCTT 180
Query 246 GATGGTGTCGTTGATCGGAAAACGTTCAAGAGCAAAGTTCCGGTGGTTACGTACGAAGAT 305
|||| | ||||||| ||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct 181 AATGGGGCCGTTGATAGGAAAACTTTCAAGAGCAAAGTTCCGGTGGTTATGTACGAAGAT 240
Query 306 TTGAAGCCGGAGATTCAACGTATATCCAACGGCGATTGTTCTCCGATCTTGTCTTCTCAC 365
|||||| ||||||||||||||||||||||||| ||| |||||||||||||||| ||||||
Sbjct 241 TTGAAGACGGAGATTCAACGTATATCCAACGGTGATCGTTCTCCGATCTTGTCCTCTCAC 300
Query 366 CCCATCACCGAGTTTCTCACAAGCTCAGGAACATCTGCTGGTGAGAGGAAACTAATGCCA 425
||||||| |||||||||||||||||| ||||||||| |||||||||||||| |||||||
Sbjct 301 CCCATCAACGAGTTTCTCACAAGCTCTGGAACATCTTCTGGTGAGAGGAAATTAATGCCG 360
Query 426 ACAATTGAAGAAGACTTAGACCGACGTCAGCTTTTATACAGTCTTCTCATGCCTGTGATG 485
||||||||||||||| || ||||||||||||||||| |||||| |||||||||||||||
Sbjct 361 ACAATTGAAGAAGACATACACCGACGTCAGCTTTTAGGCAGTCTACTCATGCCTGTGATG 420
Query 486 AATCTCTACGTGCCGGGATTAGACAAAGGCAAAGGGTTATACTTCTTATTCGTGAAGTCG 545
||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct 421 AATCTCTACCTGCCGGGATTAGACAAAGGCAAAGGCTTATACTTCTTATTTGTGAAGTCG 480
Query 546 GAGTCAAAGACGTCAGGTGGGTTACCGGCTCGTCCGGTTCTCACGAGTTATTACAAAAGC 605
||||| ||||||||||||||||||||||||||||||| |||||| ||||| |||||||||
Sbjct 481 GAGTCTAAGACGTCAGGTGGGTTACCGGCTCGTCCGGCTCTCACTAGTTACTACAAAAGC 540
Query 606 GACCACTTCAAGAGACGACCGTACGATCCGTACAACGTCTACACTAGTCCTAACGAAGCC 665
||||||||| | | || ||| ||||| | | |||| |||||||||||||| ||||||
Sbjct 541 GACCACTTC---A-A-GA-CGTCCGATCTGCAAAACGACTACACTAGTCCTAGGGAAGCC 594
Query 666 ATCCTCTGCTCCGACTCGTCCCAAAGCATGTATGCTCAAATGCTATGTGGTCTCTTAATG 725
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 595 ATCCTCTGCTCCGACTCGTCACAAAGCATGTATGCGCAAATGCTATGTGGTCTCTTAATG 654
Query 726 CGCCATGAAGTTCTCCGACTCGGCGCAGTGTTTGCTTCCGGTCTCCTCCGTGCCATAAGC 785
||||||||||||||||||||||| || |||||| ||||||||||||||||||||||||||
Sbjct 655 CGCCATGAAGTTCTCCGACTCGGTGCGGTGTTTCCTTCCGGTCTCCTCCGTGCCATAAGC 714
Query 786 TTCCTCCAGAACAATTGGAAGGAACTTGCTC-GTGATATCTCAACCGGAACCCTAAGTTC 844
||||||||||| ||||||||||||||||||| | |||||||||||||||| |||||||||
Sbjct 715 TTCCTCCAGAATAATTGGAAGGAACTTGCTCAG-GATATCTCAACCGGAATCCTAAGTTC 773
Query 845 TCGAATCTTCGATCCTGCCATTAAAAACCGCATGTCCAAGATTTTGACCAAACCTGATCA 904
| |||||| |||||||| |||| ||||| ||||| |||||||||| |||||||||| |
Sbjct 774 TAAAATCTTTGATCCTGCGGTTAACAACCGAATGTCGAAGATTTTGAACAAACCTGATGA 833
Query 905 AGAACTGGCTGAGTTTTTGGTTGGGGTTTGTTCACAAGAGAATTGGGAAGGGATAATCAC 964
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 834 AGAACTGGCTGAGTTTTTGATAGGGGTTTGTTCACAAGAGAATTGGGAAGGGATAATCAC 893
Query 965 AAAGATATGGCCTAACACGAAGTACCTCGACGTGATTGTTACTGGAGCAATGGCTCAGTA 1024
||||||||||||||||||||||||||| || |||||| ||||||||||||||||||||||
Sbjct 894 AAAGATATGGCCTAACACGAAGTACCTTGATGTGATTATTACTGGAGCAATGGCTCAGTA 953
Query 1025 TATCCCGACGTTGGAGTACTATAGCGGTGGATTACCGATGGCTTGCACGATGTATGCTTC 1084
|||||||| ||| |||||||||||||||||||||||||| || ||||||| ||||||||
Sbjct 954 TATCCCGATGTTAGAGTACTATAGCGGTGGATTACCGATTGCAAGCACGATCTATGCTTC 1013
Query 1085 GTCCGAAAGTTATTTCGGGATTAACCTAAAGCCGATGTGTAAACCCTCGGAGGTTTCTTA 1144
||| |||||||| ||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 1014 GTCGGAAAGTTACTTCGGGATTAACCTAAATCCCATGTGTAAACCCTCGGAGGTTTCTTA 1073
Query 1145 CACAATCATGCCAAACATGGCCTACTTTGAATTCCTCCCACATAATCACGATGGAGATGG 1204
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1074 CACAATCATGCCAAACATGGCCTACTTCGAATTCCTCCCACATAATCACGATGGAGATGG 1133
Query 1205 AGCAGCAGAAGCATCATTAGACGAAACGTCACTTGTGGAGCTTGCTAATGTTGAGGTAGG 1264
|||| | | ||| ||||| |||||||||||||| ||| |||||||||| ||
Sbjct 1134 AGCA---------T--T-AGATGAAACCTCACTTGTGGAGCTAGCTGATGTTGAGGTCGG 1181
Query 1265 AAAAGAGTACGAACTCGTGATCACGACCTACGCGGGGCTCTACCGTTACAGAGTTGGCGA 1324
||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1182 AAAAGAGTATGAACTCGTGATCACGACCTACGCAGGGCTATACCGTTACAGAGTTGGCGA 1241
Query 1325 CATTCT-TCGTGTCACGGGGTTCCATAATTCCGCTCCACAGTTCAAATTCATACGGAGAA 1383
||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1242 CATCCTCT-GTGTCACGGGGTTCCATAATTCCGCTCCACAGTTCAAATTCATACGGAGAA 1300
Query 1384 AGAATGTTCTGCTAAGCGTAGAATCCGATAAAACCGACGAGGCTGAGCTACAAAAAGCAG 1443
|||||||| |||||||| | ||||| |||||||| ||||||||||| ||||||| ||||
Sbjct 1301 AGAATGTTTTGCTAAGCATTGAATCTGATAAAACAGACGAGGCTGATTTACAAAAGGCAG 1360
Query 1444 TGGAGAATGCGTCGAGGTTGTTTGCAGAGCAAGGAACACGTGTGATCGAGTACACAAGCT 1503
|||| ||||||||||||||| ||||||||||||||||| |||||||||||||||| ||||
Sbjct 1361 TGGACAATGCGTCGAGGTTGCTTGCAGAGCAAGGAACAAGTGTGATCGAGTACACGAGCT 1420
Query 1504 ACGCAGAAACGAAGACTATACCGGGTCATTACGTAATCTACTGGGAGCTACTTGGTAGAG 1563
| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1421 ATGCAGAAACGAAGACTATACCGGGTCATTACGTAATCTACTGGGAGTTACTTGGTAGAG 1480
Query 1564 ATCAAAGCAATGCTCTTA-TGAGCGAAGAAGTCATGGCTAAGTGCTGTTTGGAGATGGAG 1622
| ||||||||||||||| | ||||| |||||||||||||||||||||||||||||||||
Sbjct 1481 ACCAAAGCAATGCTCTTCCT-AGCGACGAAGTCATGGCTAAGTGCTGTTTGGAGATGGAG 1539
Query 1623 GAATCTTTAAACTCGGTTTATAGACAAAGCCGGGTCGCTGATAAATCGATCGGCCCGTTG 1682
||||| | |||||||||||||||||||| ||||| | |||||||| ||||| ||||||
Sbjct 1540 GAATCGCTGAACTCGGTTTATAGACAAAGTCGGGTTTCAGATAAATCTATCGGTCCGTTG 1599
Query 1683 GAGATACGTGTGGTACGGAACGGTACGTTTGAGGAGCTCATGGACTATGCCATCTCGAGA 1742
|||||||||||||| | ||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1600 GAGATACGTGTGGTGCAGAACGGTACGTTTGATGAGCTCATGGACTATGCCATCTCGAGA 1659
Query 1743 GGCGCATCGATTAATCAGTATAAGGTACCGAGGTGCGTGAGCTTCACACCTATCATGGAG 1802
|| |||||||||||||||||||||| ||||||||||||||| ||||||| ||| ||||
Sbjct 1660 GGTTCATCGATTAATCAGTATAAGGTCCCGAGGTGCGTGAGCCTCACACCGATCTTGGAA 1719
Query 1803 CTGCTTGACTCTAGAGTTGTGTCTGCTCATTTCAGCCCTTCGTTGCCGCATTGGTCACCA 1862
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1720 CTGCTTGACTCTAGAGTTGTGTCTGCTCATTTCAGCACTTCGTTGCCGCATTGGTCACCA 1779
Query 1863 GAACGACGTCGTTAGATAAAACTTTAT 1889
|||||||||| ||||||||||||||||
Sbjct 1780 GAACGACGTCATTAGATAAAACTTTAT 1806
> Ahg481188 jgi|Araly1|481188|fgenesh2_kg.4__248__AT2G23170.1
Length=1901
Score = 1327 bits (718), Expect = 0.0
Identities = 1444/1785 (81%), Gaps = 87/1785 (5%)
Strand=Plus/Plus
Query 126 GTGAAAGCTCTCAAGTTCATTGAAGAAATGACT-CGGAACCCT-GA-CTCGGTTCAAG-A 181
||||| ||||| | ||||||||| || |||| | || || | | || || |||| || |
Sbjct 99 GTGAAGGCTCTGAGGTTCATTGAGGAGATGA-TACGTAA-CGTCGATTTC-GTTC-AGAA 154
Query 182 GAAGGTTC-TTGGAGAGATACTGAC-TCGTAACTCTAACACCGAATATCTGAAACGGTTC 239
|| | || || |||||||||| | ||| ||||| | || || || |||||||||||
Sbjct 155 TAAAG-TCATTAGAGAGATACT-TCGTCGCAACTCGGAGACTGAGTACCTGAAACGGTTT 212
Query 240 GATCTTGATGG-TGTCGTTGATCGGAAAACGTTCAAGAGCAAAGTTCCGGTGGTTACGTA 298
| ||| | || | || ||| |||||| | || |||| |||||||||||||||||| ||
Sbjct 213 GGTCTCAAGGGAT-TCACTGACCGGAAAGCATTTAAGACCAAAGTTCCGGTGGTTACCTA 271
Query 299 CGAAGAT-TTGAAGCCGGAGATTCAACGTATATCCAACGGCGATTGTTCTCCGATCTTGT 357
||| ||| || || |||||||||||||||||| |||| || || | ||| ||||||||
Sbjct 272 CGATGATCTT-AAACCGGAGATTCAACGTATAGCCAATGGTGACCGGTCTATGATCTTGT 330
Query 358 CTTCTCACCCCATCACCGAGTTTCTCACAAGCTCAGGAACATCTGCTGGTGAGAGGAAAC 417
| || ||||||||||||||||| ||||||||||| || ||||| |||||||| |||||
Sbjct 331 CATCACACCCCATCACCGAGTTCCTCACAAGCTCTGGGACATCAGCTGGTGAAAGGAAGT 390
Query 418 TAATGCCAACAATTGAAGAAGACTTAGACCGACGTCAGCTTTTATACAGTCTTCTCATGC 477
| ||||| || |||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 391 TGATGCCCACCATTGAAGAAGACATGGACCGACGTCAGCTTTTATACAGTCTTCTCATGC 450
Query 478 CTGTGATGAATCTCTACGTGCCGGGATTAGACAAAGGCAAAGGGT-TATACTTCTTATTC 536
|||||||||||||||||||||| ||||||||||||||||| || | |||| || || |||
Sbjct 451 CTGTGATGAATCTCTACGTGCCCGGATTAGACAAAGGCAA-GGCTCTATATTTTTTGTTC 509
Query 537 GTGAAGTCGGAGTCAAAGACGTCAGGTGGGTTACCGGCTCGTCCGGTTCTCACGAGTTAT 596
|||||| |||| || ||||| | ||||| |||||||| |||||||||||||||||||||
Sbjct 510 GTGAAGACGGAATCGAAGACACCCGGTGGATTACCGGCACGTCCGGTTCTCACGAGTTAT 569
Query 597 TACAAAAGCGACCACTTCAAGAGACGACCGTACGATCCGTACAACGTCTACACTAGTCCT 656
||||||||||| || ||||||||||| || ||||||||||||||||| ||||| || |||
Sbjct 570 TACAAAAGCGAACAATTCAAGAGACGTCCTTACGATCCGTACAACGTGTACACGAGCCCT 629
Query 657 AACGAAGCCATCCTCTGCTCC-GACTCGTCCCAAAGCATGTATGCTCAAATGCTATGTGG 715
||||||||||| || || ||| |||||||||||||||||||| |||| ||||| |||||
Sbjct 630 AACGAAGCCATTCTTTG-TCCCGACTCGTCCCAAAGCATGTACACTCAGATGCTTTGTGG 688
Query 716 TCTC-TTAATGCGCCATGAAGTTCTCCGACTCGGCGCAGTGTTTGCTTCCGGTCTCCTCC 774
|||| ||| |||| || ||||| ||||| ||||| || || || ||||||||||||||||
Sbjct 689 TCTCCTTA-TGCGTCACGAAGTCCTCCGTCTCGGTGCCGTCTTCGCTTCCGGTCTCCTCC 747
Query 775 GTGCCATAAGCTTCCTCCAGAAC-AATTGGAAGGAACTTGCTCGT-GATATCTCAACCGG 832
| |||||| | ||||| || ||| |||||||| ||||| || | |||||||| |||||
Sbjct 748 GAGCCATAGGGTTCCTTCA-AACCAATTGGAAAGAACTCGC-CAACGATATCTCCACCGG 805
Query 833 AACCCTAAGTTCTCGAATCT-TCGATCCTGCCATTAAAAACCGCATGTCCAAGATTTTGA 891
||||||||||| |||||| | ||||| || |||||| | ||||||||||||| ||||
Sbjct 806 TACCCTAAGTTCAAGAATCTCT-GATCCGGCTATTAAAGAGAGCATGTCCAAGATCTTGA 864
Query 892 CCAAACCTGATCAAGAACTGGCTGAGTTTT-TGG-TTGGGGTTTGTTCACAAGAGAAT-- 947
||||||| || |||||||||||||| ||| | || || | ||| ||||| |||
Sbjct 865 CCAAACCGGACCAAGAACTGGCTGA-TTTCATAACTTCGG-TATGTGGTCAAGACAATAA 922
Query 948 T-GGGAAGGGATAATCACAAAGATATGGCCTAACACGAAGTACCTCGACGTGATTGTTAC 1006
| ||||||| || || || ||||| ||||||||||| |||||||| ||||| || |||||
Sbjct 923 TTGGGAAGGTATTATTACTAAGATTTGGCCTAACACTAAGTACCTTGACGTCATCGTTAC 982
Query 1007 TGGAGCAATGGCTCAGTATATCCCGACG-TTGGAGTACTATAGCGGTGGATTACCGATGG 1065
|||||| ||||||||||||||||||| | ||| ||||||||||||| || ||||||||||
Sbjct 983 TGGAGCCATGGCTCAGTATATCCCGATGCTTG-AGTACTATAGCGGCGGGTTACCGATGG 1041
Query 1066 CTTGCACGATGTATGCTTCGTCCGAAAGTTA-TTTCGGGATTAACCT-AAAGCCGATGTG 1123
|||||||||||||||| || ||||| ||||| ||| ||||| ||| | ||| || |||||
Sbjct 1042 CTTGCACGATGTATGCATCCTCCGAGAGTTACTTT-GGGATCAACTTGAAA-CCAATGTG 1099
Query 1124 TAAACCCTCGGAGGTTTCTTACACAATCATGCCAAACATGGCCTACTTTGAATTCCTCCC 1183
|||||| || |||||||||||||| || |||||||||||||||||||| || || |||||
Sbjct 1100 TAAACCTTCTGAGGTTTCTTACACCATTATGCCAAACATGGCCTACTTCGAGTTTCTCCC 1159
Query 1184 ACATAATCACGATGGAGATGGAGCAGCAGAAGCATCATTAGACGAAACGTCACTTGTGGA 1243
||| | | | | | | | | | || ||| |||| | | | || ||
Sbjct 1160 TCATGA--A-G-TCCC-A---ACCGG-A-AA--ATC------CGAA-C-T---T-GTAGA 1195
Query 1244 GCTTGCTAATGTTGAGGTAGGAAAAGAGTACGAACTCGTGATCACGACCTACGCGGGGCT 1303
||| ||| |||| ||||| || ||||||||||| || |||||||| ||||| || |||||
Sbjct 1196 GCTAGCTGATGTCGAGGTTGGGAAAGAGTACGAGCTTGTGATCACAACCTATGCAGGGCT 1255
Query 1304 CTA-CCGTTACAGAGTTGGCGACATTCTTCGTGTCACGGGGTTCCATAATTCCGCTCCAC 1362
|| |||||| |||||||| || ||||||| || || || ||| | |||||||||||||
Sbjct 1256 -TAACCGTTATAGAGTTGGTGATATTCTTCAAGTGACTGGATTCTACAATTCCGCTCCAC 1314
Query 1363 AGTTCAAATTCATACGGAG-AAAGAATGTTCTGCTAAGCGTAGAATCCGATAAAACCGAC 1421
||||||| || | ||||| ||| || ||| |||| ||| | || || |||||||||||
Sbjct 1315 AGTTCAAGTTTGTGCGGAGGAAA-AACGTTTTGCTTAGCATTGAGTCGGATAAAACCGAT 1373
Query 1422 GAGGCTGAGCTACAAAAAGCAGTGGAGAATGCGTCGAG-GTTGTTTGCAGAGCAAGGAAC 1480
|| |||||||| ||||| || || |||||||| ||| | ||| ||| |||||||||||
Sbjct 1374 GAAGCTGAGCTCCAAAAGGCGGTTGAGAATGCATCG-GTGTTACTTGGAGAGCAAGGAA- 1431
Query 1481 A-CGTGTGATCGAGTACACAAGCTACGCAGAAACGAAGACTATACCGGGTCATTACGTAA 1539
| || |||||||||||||||||||||||||| || ||||||||||| || ||||| || |
Sbjct 1432 ATCGCGTGATCGAGTACACAAGCTACGCAGAGACAAAGACTATACCTGGCCATTATGTCA 1491
Query 1540 TCTACTGGGAGCTACTTGGTAGA-G-ATCAAAGCAATGCTCTTA-TGAGCGAAGAAGTCA 1596
||||||||||| | || ||| || | |||||| |||| | | | ||| ||| | ||||
Sbjct 1492 TCTACTGGGAGTTTCT-GGT-GAAGGATCAAACCAATCCACCAAATGA-CGA-G--GTCA 1545
Query 1597 TGGCTAAGTGCTGTTTGGAGATGGAGGAATCTTTAAACTCGGTTTATAGACAAAGCCGGG 1656
||||| |||||| ||||| |||||||| || || ||||| || ||||||||||| ||||
Sbjct 1546 TGGCTCGGTGCTGCTTGGAAATGGAGGAGTCGTTGAACTCTGTGTATAGACAAAGTCGGG 1605
Query 1657 TCGCTGATAAATCGATCGGCCCGTTGGAGATACGTGTGGT-ACGGAACGGTACGTTTGAG 1715
| || ||||| ||||| || || | |||||||||||||| | | || || ||||| |||
Sbjct 1606 TTGCGGATAAGTCGATAGGGCCACTCGAGATACGTGTGGTGAAG-AATGGAACGTTCGAG 1664
Query 1716 GAGCTCATGGACTATGCCATCTCGAGAGGCGCATCGATTAATCAGTATAAGGTACCGAGG 1775
||||||||||||||||||||||||||||| || ||||| || ||||| ||||| ||| ||
Sbjct 1665 GAGCTCATGGACTATGCCATCTCGAGAGGAGCCTCGATCAACCAGTACAAGGTGCCGCGG 1724
Query 1776 TGCGTGAGCTTCACACCTATCA-TGGAGCTGCTTGACTCTAGAGTTGTGTCTGCTCATTT 1834
|| ||||| ||||| || || | |||||||||||||||| || ||||| ||| | || ||
Sbjct 1725 TGTGTGAGTTTCACGCCAAT-AGTGGAGCTGCTTGACTCAAGGGTTGTATCTACACACTT 1783
Query 1835 CAGCCCTTCGTTGCCGCATTGGTCACCAGAACGACGTCGTT-AGA 1878
||| || | ||||| ||||||||||||||||| ||| ||| |||
Sbjct 1784 CAGTCCAGCTTTGCCACATTGGTCACCAGAACGCCGTTGTTGAGA 1828
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 80179965725
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5