BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G37410.1
Length=1722
Score E
Sequences producing significant alignments: (Bits) Value
Ahg490879 jgi|Araly1|490879|fgenesh2_kg.7__312__AT4G37410.1 1365 0.0
Ahg328029 jgi|Araly1|328029|fgenesh1_pm.C_scaffold_7000256 1181 0.0
Ahg490876 jgi|Araly1|490876|fgenesh2_kg.7__309__AT4G37430.1 501 7e-141
Ahg490885 jgi|Araly1|490885|fgenesh2_kg.7__318__AT4G37370.1 73.1 6e-12
> Ahg490879 jgi|Araly1|490879|fgenesh2_kg.7__312__AT4G37410.1
Length=1641
Score = 1365 bits (739), Expect = 0.0
Identities = 915/998 (92%), Gaps = 20/998 (2%)
Strand=Plus/Plus
Query 701 CTTTTTACTTTCATCACCACTAATAGTGGCGCGAGGCATCCTGGAGAATACTTGCCCTTC 760
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 654 CTTTTTACTTTCATCACCACTAATAGTGGCGCGAGGCATCCTGGAGAATACTTGCCATTC 713
Query 761 ATGAAGATATTCGGAGGGAGCTTTGAGAAGGAGGTGAAAGCTGCAGCAAAAGTCATCGAT 820
|||||||||||||| |||||||| |||||||||||||||||||| |||||||| ||||||
Sbjct 714 ATGAAGATATTCGGTGGGAGCTTCGAGAAGGAGGTGAAAGCTGCTGCAAAAGTTATCGAT 773
Query 821 GAAATGTTGCAGCGTCTGCTTGACGAGTGCAAGAGTGATAAAGACGGTAACACTATGGTT 880
|| |||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 774 GAGATGTTGCAGCGTTTGCTCGACGAGTGCAAGAGTGATAAAGACGGAAACACTATGGTT 833
Query 881 AATCACTTGCTCTCTTTGCAACAGGACGACCCTGAGTACTACACTGACATCATTATCAAA 940
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 834 AATCACTTGCTCTCTTTGCAACAAGATGACCCTGAGTACTACACTGACATCATTATCAAA 893
Query 941 GGCTTAATGCTGGGTATAATGGTTGCCTCATCAGAGACCTCCGCTTTGACAATAGAGTGG 1000
||| |||||||||| |||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 894 GGCCTAATGCTGGGCATAATGGTTGCCTCATCAGAGACCTCTGCTTTGACAATAGAATGG 953
Query 1001 GCGATGGCGAGTTTGTTGAACCACCCAAAAGTTTTGGACAAAGTAAAATTAGAGATCGAC 1060
|||||||||||||||||||| ||||||||| ||||||||||||||||| |||||| ||
Sbjct 954 GCGATGGCGAGTTTGTTGAATCACCCAAAAATTTTGGACAAAGTAAAACGAGAGATGGAT 1013
Query 1061 GAGATAATCGGACAAGACCGTTTGATCGAAGAATCAGACATAGCAAACCTTCCTTACCTC 1120
|||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 1014 GAGAAAATCGGACAAGACCGTTTGATCGAAGAATCAGACATTGCAAACCTGCCTTACCTC 1073
Query 1121 CAAAACGTAGTATCCGAGACACTCCGGCTACATCCAGCAGCGCCGGTTCTTGTGCCAAGA 1180
||||| ||||| |||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 1074 CAAAATGTAGTGTCCGAGACACTCCGACTACACCCAGCAGCGCCGGTTCTTGTGCCAAGA 1133
Query 1181 TCAACAGCAGAAGACATCAAGATCGGAGGATACGATGTGCCACGTGACACAATGGTAATG 1240
||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct 1134 TCAACAGCAGAAGACATTAAGATCGGAGGATACGATGTGCCAAGTGACACAATGGTAATG 1193
Query 1241 GTGAACGCGTGGGCGATACATAGAGATCCAGATCTTTGGACCGAACCGGAGAGGTTTAAC 1300
|| ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1194 GTCAACGCGTGGGCTATACACAGAGATCCAGATCTTTGGACCGAACCGGAAAGGTTTAAC 1253
Query 1301 CCTGAGAGGTTCAACGGTGGAGAAGGAGAAAAAGATGATGTTCGTATGCTGATAGCGTTT 1360
||||||||||| ||||||||| ||||||||||||| |||||||||||||| |||||||||
Sbjct 1254 CCTGAGAGGTTTAACGGTGGACAAGGAGAAAAAGACGATGTTCGTATGCTAATAGCGTTT 1313
Query 1361 GGAAGCGGACGGAGAATATGTCCCGGTGTTGGACTAGCGCACAAGATTGTGACATTAGCG 1420
|||||||||||||| |||||||| || ||||| |||| |||||||||||||||||||||
Sbjct 1314 GGAAGCGGACGGAGGATATGTCCTGGCGTTGGGTTAGCTCACAAGATTGTGACATTAGCG 1373
Query 1421 TTAGGATCGTTAATTCAATGCTTTGATTGGA-AAAAGGTGAACGAAAAAGAGATTGATAT 1479
|||||||||| ||||||||||||||||||| |||| ||||||||| |||||||||||||
Sbjct 1374 CTAGGATCGTTGATTCAATGCTTTGATTGGAGAAAA-GTGAACGAACAAGAGATTGATAT 1432
Query 1480 GAGTGAGGGTCCGGGGATGGCTATGCGTATGATGGTGCCGTTACGAGCCTTGTGTAAGAC 1539
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1433 GAGTGAGGGTCCGGGGATGGCAATGCGTATGATGGTGCCGTTACGAGCCTTGTGTAAGAC 1492
Query 1540 TCGACCCATAATGAATAAGCTCCCGGCCTACACGAAAGTTTAGTTATGTTTTTGTA--TT 1597
||||||||||||||||||||| |||||| || |||| |||||||| |||||||||| ||
Sbjct 1493 TCGACCCATAATGAATAAGCTTCCGGCCCACTCGAAGGTTTAGTTCTGTTTTTGTAACTT 1552
Query 1598 TTTCAATGGAAAAATTGTTACATTATGTT---GT--GT--AACCAAGACTACGAGTGTAA 1650
||| | || |||||| ||||||| |||| || || ||| | ||||||| ||||
Sbjct 1553 TTT-ATTGAAAAAATA-TTACATTCTGTTTACGTTAGTGTAACGAGGACTACGTGTGT-- 1608
Query 1651 TGCGCGAATATATTGAAATAAAATGCTATATTTAGCAA 1688
| |||| |||||||||||| ||||| ||||||||
Sbjct 1609 -G----AATAAATTGAAATAAAAAGCTATGTTTAGCAA 1641
Score = 979 bits (530), Expect = 0.0
Identities = 614/655 (94%), Gaps = 3/655 (0%)
Strand=Plus/Plus
Query 11 TTTTCTACTATAAATAGATTACCAAATCATTCGATCGGAGACAATCACCAAAG-AAAGAA 69
||| ||||||||||||||||| ||||||||| |||||||||| |||||||||| ||| ||
Sbjct 1 TTTCCTACTATAAATAGATTATCAAATCATTTGATCGGAGAC-ATCACCAAAGAAAAAAA 59
Query 70 GTACAAAATGTTTAACTATGTGATTATTCTTCCTTTAGCTCTCTTCCTCTTGGCTTACAA 129
|| |||||| |||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 60 CTA-AAAATGCTTAACTATGTGATTATTCTTCCTTTAGCACTCTTTCTCTTGGCTTACAA 118
Query 130 ATTCTTCTTTACATCTAAAAAGCAGCGTTACTATCTCCCTCCCTCTCCATCTTACTCTCT 189
|||||||||||| || |||| |||||||||| ||||||||||||||||||||||||||||
Sbjct 119 ATTCTTCTTTACCTCCAAAAGGCAGCGTTACCATCTCCCTCCCTCTCCATCTTACTCTCT 178
Query 190 CCCAATCCTCGGCCACCACCTCCTCATCAAACCGCCGGTTCACCGTCTCTTCCACCGCCT 249
||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 179 CCCCGTCCTCGGTCACCACCTCCTCATCAAACCGCCGGTTCACCGTCTCTTCCACCGCCT 238
Query 250 TTCCAATATCCATGGCCCAATCTTCTACCTCCGACTTGGTTCCCGCCGTGCCGTCGTCAT 309
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 239 CTCCAATATCCACGGCCCAATCTTCTACCTCCGACTTGGTTCCCGCCGTGCCGTCGTCAT 298
Query 310 ATCTTCCTCCTCGCTGGCAAGAGAATGCTTCACAGGTCAAAACGATGTCATTGTATCAAA 369
|| |||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 299 CTCCTCCTCCTCACTGGCAAGAGAATGTTTCACAGGTCAAAACGATGTCGTTGTATCAAA 358
Query 370 CCGCCCTCGTTTTCTAACCTCCAAATACATTGCTTACAACTACACAACCATCGCAACAAC 429
|||||||||||| |||||||| ||||| | |||||||||||||||||||||||||| ||
Sbjct 359 CCGCCCTCGTTTCCTAACCTCTAAATATGTCGCTTACAACTACACAACCATCGCAACCAC 418
Query 430 ATCTTACGGTGACCACTGGCGTAACCTCCGCCGCATTTGCTCCCTCGAAATCGTCTCCTC 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 419 ATCTTACGGTGACCACTGGCGTAACCTCCGCCGCATTTGCTCCCTCGAAATCGTCTCCTC 478
Query 490 AAAACGTCTCGCCAACTTTCTCCACATCCGCAAAGAGGAGATCCAGCGCATGCTAACGAG 549
||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 479 AAAACGTCTAGCCAATTTTCTCCACATCCGCAAAGAGGAGATCCAGCGCATGCTCACGAG 538
Query 550 ACTCTCACGTGACGCCCGTGTCGGCAAAGAGGTCGAGCTCGAGTCTATCTTGTACGACCT 609
|||||||||||||||||||| ||||| ||||||||||||||||| |||| ||||||||
Sbjct 539 GCTCTCACGTGACGCCCGTGTTGGCAACGAGGTCGAGCTCGAGTCGGTCTTATACGACCT 598
Query 610 AACGTTCAACAATATCGTGAGGATGGTTACAGGGAAGATATACTACGGCGACGAT 664
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 599 AACGTTCAACAATATCGTGAGGATGGTTACAGGGAAGATATATTACGGCGACGAT 653
> Ahg328029 jgi|Araly1|328029|fgenesh1_pm.C_scaffold_7000256
Length=1500
Score = 1181 bits (639), Expect = 0.0
Identities = 1228/1511 (81%), Gaps = 46/1511 (3%)
Strand=Plus/Plus
Query 77 ATGTTTAACTATGTGATTATTCTTCCTTTAGCTCTCTTCCTCTTGGCTTACAAATTCTTC 136
|||||| ||||||||||| |||| |||||||||||||| || |||||||||||||| |||
Sbjct 1 ATGTTTTACTATGTGATTGTTCTCCCTTTAGCTCTCTTTCTTTTGGCTTACAAATTATTC 60
Query 137 TTTACATCTAAAAAGCAGCGTTACTATCTCCCTCCCTCTCCATCTTACTCTCTCCCAATC 196
|| || || ||| |||||||| | | ||||||||||||||| |||| ||||||||||||
Sbjct 61 TTCACCTCCAAACCGCAGCGTTTCAACCTCCCTCCCTCTCCACCTTATTCTCTCCCAATC 120
Query 197 CTCGGCCACCACCTCCTCATCAAACCGCCGGTTCACCGTCTCTTCCACCGCCTTTCCAAT 256
||||||||||||| |||| | ||||||||||| ||||||| ||||||||||||||||||
Sbjct 121 CTCGGCCACCACCACCTCCTAAAACCGCCGGTCCACCGTCACTTCCACCGCCTTTCCAAA 180
Query 257 ATCCATGGCCCAATCTTCTACCTCCGACTTGGTTCCCGCCGTGCCGTCGTCATATCTTCC 316
|| || ||||||||||||| ||||| | |||| ||||||||||||||||| || || |||
Sbjct 181 ATACACGGCCCAATCTTCTCCCTCCAATTTGGCTCCCGCCGTGCCGTCGTAATCTCCTCC 240
Query 317 TCCTCGCTGGCAAGAGAATGCTTCACAGGTCAAAACGATGTCATTGTATCAAACCGCCCT 376
||||| || |||| | ||||||||||||| |||||||| ||||| |||||||||| |||
Sbjct 241 TCCTCACTCGCAACACAATGCTTCACAGGCCAAAACGACATCATTTTATCAAACCGGCCT 300
Query 377 CGTTTTCTAACCTCCAAATACATTGCTTACAACTACACAACCATCGCAACAACATCTTAC 436
|||| |||||| | ||||| | |||||||||||||||||| | | ||| | ||||
Sbjct 301 TGTTTCCTAACCGCTAAATATGTCGCTTACAACTACACAACCGTTGGAACCGCGCCTTAT 360
Query 437 GGTGACCACTGGCGTAACCTCCGCCGCATTTGCTCCCTCGAAATCGTCTCCTCAAAACGT 496
|| ||||||||||||||||||||||||||||||||||| |||||| ||||||| || |||
Sbjct 361 GGGGACCACTGGCGTAACCTCCGCCGCATTTGCTCCCTGGAAATCCTCTCCTCGAACCGT 420
Query 497 CTCGCCAACTTTCTCCACATCCGCAAAGAGGAGATCCAG-CGCATGCTAACGAGACTCTC 555
||| | ||||| ||||||||||||||||| || |||| | |||||||| |||||||| ||
Sbjct 421 CTCACAAACTTCCTCCACATCCGCAAAGACGAAATCC-GCCGCATGCTCACGAGACTTTC 479
Query 556 ACGTGACGCCCGTGTCGGCAAAGAGGTCGAGCTCGAGTCTATCTTGTACGACCTAACGTT 615
|||||| | ||| ||||||| ||||||||||| | |||||| ||| ||||||||
Sbjct 480 ACGTGA----C--GTCAACAAAGAGATCGAGCTCGAGCCGCTCTTGTCCGATCTAACGTT 533
Query 616 CAACAATATCGTGAGGATGGTTACAGGGAAGATATACTACGGCGACGATGT-CAGCGACA 674
|||||| ||||| ||||||||||| ||||||| ||||||||||||||| || || ||
Sbjct 534 CAACAACATCGTAAGGATGGTTACTGGGAAGAGATACTACGGCGACGAAGTCCA-TAACG 592
Query 675 AAGAAGAAGCAG-A-GTTGTTCAAGAAGCT-TTTTACTTTCATC-ACCACTAATAGTGGC 730
||||||| || | | ||| |||||||| || | | | ||| || ||| ||| |||
Sbjct 593 AAGAAGAGGC-GAATGTT-TTCAAGAAACTGGTCGCCGAT-ATCAACGACT-GTAGCGGC 648
Query 731 GCGAGGCATCCTGGAGAATACTTGCCCTTCATGAAGATATTCGGAGGGAGCTTTGAGAAG 790
||||||||||| ||||| ||||| |||||||||||||| |||||||||||||||||||||
Sbjct 649 GCGAGGCATCCCGGAGATTACTTACCCTTCATGAAGATGTTCGGAGGGAGCTTTGAGAAG 708
Query 791 GAGGTGAAAGCTGC-AGCAAAAGT-CATCGATGAAATGTTGCAGCGTCTGCTTGACGAGT 848
| ||||||||| | || || | ||| ||||| || ||||||||| ||||||| ||||
Sbjct 709 AAAGTGAAAGCT-CTTGCGGAA-TCCATGGATGAGATCTTGCAGCGTTTGCTTGAAGAGT 766
Query 849 GCAAGAGTGATAAAGACGGTAACACTATGGTTAATCACTTGCTCTCT-TTGCAACAGGAC 907
| ||||| ||||||||||||||||||||||||||||| ||||||||| || ||||| |
Sbjct 767 GTAAGAGAGATAAAGACGGTAACACTATGGTTAATCATTTGCTCTCTCTT-CAACAACAT 825
Query 908 GACCCTGAGTACTACACTGACATCATTATCAAAGGCTTAATGCTGGGTATAATGGTTGCC 967
|| || ||||| ||||||||| ||| |||||||||| |||||||||| || ||| | |||
Sbjct 826 GAACCAGAGTATTACACTGACGTCACTATCAAAGGCCTAATGCTGGGCATGATGATCGCC 885
Query 968 TCATCAGAGACCTCCGCTTTGACAATAGAGTGGGCGATGGCGAGTTTGTTGAACCACCCA 1027
| |||| || || || |||| | |||||||||||| |||||||| | || || |||
Sbjct 886 GGAACAGATACTTCTGCCGTGACGCTGGAGTGGGCGATGTCGAGTTTGCTAAATCATCCA 945
Query 1028 AAAGT-TTTGGACAAAGTAAAATTAGAGATCGACGAGATAATCGGACAAGACCGTTTGAT 1086
| || |||| | |||| ||| ||||||| ||||||| |||||||||||| ||||||||
Sbjct 946 GA-GTCTTTGAAAAAAGCGAAACTAGAGATTGACGAGAAAATCGGACAAGAACGTTTGAT 1004
Query 1087 CGAAGAATCAGACATAGCAAACCTT-CCTTACCTCCAAAACGTAGTATCCGAGACACTCC 1145
||| ||| ||||||| |||||| || |||||||| |||||| |||| | || ||| |||
Sbjct 1005 CGACGAACCAGACATCGCAAAC-TTGCCTTACCTTCAAAACATAGTGTTGGAAACATTCC 1063
Query 1146 GGCTACATCCAGCAGCGCCGGTTCTTGTGCCAAGATCAACAG-CAGAAGACATCAA-GAT 1203
|| || | || || |||||| |||| || ||||||||| | | | || || || || | |
Sbjct 1064 GGTTATACCCGGCGGCGCCGCTTCTAGTACCAAGATCACC-GTCGGAGGATATTAAAGTT 1122
Query 1204 CGGAGGATACGATGTGCCACGTGACACAATGGTAATGGTGAACGCGTGGGCGATACATAG 1263
||||||||||| |||||||||| ||| ||||| ||||| || || ||||| ||||| ||
Sbjct 1123 -GGAGGATACGACGTGCCACGTGGCACGATGGTGATGGTTAATGCCTGGGCTATACACAG 1181
Query 1264 AGATCCAGATCTTTGGACCGAACCGGAGAGGTTTAACCCTGAGAGGTTCAACGGTGGAGA 1323
|||||||| || |||| |||||||||| |||||| || |||||||| |||| |||||
Sbjct 1182 GGATCCAGAGCTCTGGAATGAACCGGAGAAGTTTAAACCAGAGAGGTTTAACGACGGAGA 1241
Query 1324 AGGAGAAAAAGATGATGTTCGTATGCTGATAGC-GTTTGG-AAGCGGACGGAGAATA-TG 1380
||||| | ||| || |||| || |||||| || |||||| || ||||||||| | ||
Sbjct 1242 AGGAGGAGGAGAAGACGTTCATAAGCTGAT-GCCGTTTGGGAAT-GGACGGAGA-TCGTG 1298
Query 1381 TCCCGGTGTTGGACTAGCGCACAAGATTGTGACATTAGCGTTAGGATCGTTAATTCAATG 1440
|||||| | ||| ||| ||| ||||| ||||| || |||||||| ||||| ||||||||
Sbjct 1299 TCCCGGCGCCGGATTAGGGCAGAAGATCGTGACGTTGGCGTTAGGTTCGTTGATTCAATG 1358
Query 1441 CTTTGATTGG-AAAAAGGTGAACGAAAAAG-AGATTGATATGA-GTGAGGGTCCGGGGAT 1497
||| || ||| |||||| | || | ||| || | ||||||| | ||| |||||| ||
Sbjct 1359 CTTCGACTGGGAAAAAG-TCAATGGCGAAGCAG-TCGATATGACG-GAGACTCCGGGTAT 1415
Query 1498 GGCTATGCGTATGATGGTGCCGTTACGAGCCTTGTGT-AAGACTCGACCCATAATGAATA 1556
||| ||||||| || ||||| ||| | || || ||| || |||| |||||||||||||
Sbjct 1416 GGCGATGCGTAAGAAAGTGCCTTTATGGGCTTTATGTCAAT-CTCGGCCCATAATGAATA 1474
Query 1557 AGCTCCCGGCC 1567
|||| | ||||
Sbjct 1475 AGCTTCAGGCC 1485
> Ahg490876 jgi|Araly1|490876|fgenesh2_kg.7__309__AT4G37430.1
Length=1637
Score = 501 bits (271), Expect = 7e-141
Identities = 1051/1418 (74%), Gaps = 92/1418 (6%)
Strand=Plus/Plus
Query 198 TCGGCCACCACCTCCTCATCAAACCGCCGGTTCACCGTCTCTTCCACCGCCTT--TCCAA 255
||||||| | || |||||| ||||||||| | ||||||||| |||| || || ||| |
Sbjct 193 TCGGCCATCTCCACCTCATGAAACCGCCGATCCACCGTCTCCTCCAACG--TTACTCC-A 249
Query 256 TATCC-AT--GGCCCAATCTTCTACCTCCGACTT-GGTTCCCGCCGTGCCGTCGTCATAT 311
| || || ||||||||||| | |||||| || || |||||||||| ||| ||||||
Sbjct 250 -A-CCAATACGGCCCAATCTTTTCCCTCCG-TTTCGGCTCCCGCCGTGTCGTGGTCATAA 306
Query 312 CTTCCTCC-TCGCT-GGCAAGAGAATGCTTCACAGGTCAAAACGATGTCATTGTATCAAA 369
||||| || || || | | | ||||| |||||| || |||||||| || || | || |
Sbjct 307 CTTCC-CCTTCCCTCGCCCA-AGAATCCTTCACCGGCCAAAACGACATCGTTCTTTCTAG 364
Query 370 CC-GCC-CTCGTTTTCTAACCTCCAAATACATTGCTTACAACTACACAACCATCGCAACA 427
|| ||| ||| || ||| |||||||| | || |||||| |||||||| | | ||||
Sbjct 365 CCGGCCGCTC--CAACTCACCGCCAAATACGTCGCATACAACCACACAACCGTTGGAACA 422
Query 428 ACAT-CTTACGGTGACCACTGGCGTAACCTCCGCCGCATTTGCTCCCTCGAAAT-CGTCT 485
| | |||||||||||||||||||||||||||||||||||||||| | || || | |||
Sbjct 423 GC-TCCTTACGGTGACCACTGGCGTAACCTCCGCCGCATTTGCTCTCAAGAGATTC-TCT 480
Query 486 CCTCAAAACGTCTCGCCAACTTTCTCCACATCCGCAAAGAGGAGATCC-AGCGCATGCTA 544
||||| | ||||||| |||||| | |||||||||||||| |||||| | || |||||
Sbjct 481 CCTCACACCGTCTCGTCAACTTCCAACACATCCGCAAAGACGAGATCTTA-CGAATGCTC 539
Query 545 ACGAGACTCTCACGTGACGCCCGTGTCGGCAAAG-AGGT--CGAG--C--TCG-A--GT- 593
|| | ||||||||| || | | | ||||| | | ||| | || | |
Sbjct 540 ACTCGCCTCTCACGTTACACACAAACCTCCAAAGGAAGCAACGACTTCACTCACATCGAA 599
Query 594 CT--A-----TCTTGTACGACCTAACGTTCAACAATATCGTGAGGATGGTTACAGGGAAG 646
|| | |||| | ||| ||||| |||||||| || || || |||||||||||||||
Sbjct 600 CTCGAACCGCTCTTATCCGATCTAACATTCAACAACATAGTAAGAATGGTTACAGGGAAG 659
Query 647 ATATACTACGGCGACGATGTCAGCGACAAAGAAGAAGCAGAGTTGTTCAAGAAGCTTTT- 705
| ||| |||||||||||||||| | |||| |||||||||||| | ||||||||||| |
Sbjct 660 AGATATTACGGCGACGATGTCAACAACAAGGAAGAAGCAGAGCTATTCAAGAAGCTCGTC 719
Query 706 TACTTTCATCACCAC-TAATAGTGGCGCGAGGCAT-CCTGGAGAATACTTGCCCTT-CAT 762
||| | ||| ||| || ||| ||||| | ||| || | || ||||| || | | |
Sbjct 720 TACGAT-ATCGCCATGTA-TAGCGGCGCTAACCATTCC-GCCGATTACTTACCAATAC-T 775
Query 763 GAAGATATTCGGAGGGAGCTTTGAGAAGGAGGTGAAAGCTGCAG-CAAAAGTCATCGATG 821
|| ||||||||| | || ||||| || || |||||| || |||| | || ||||
Sbjct 776 AAAAATATTCGGAAACAAATTCGAGAAAGAAGTTAAAGCTATAGGCAAATCT-ATGGATG 834
Query 822 AAATGTTGCAGCGTCTGCTTGACGAGTGCAAGA-GTGATAAAGACGGTAACACTATGGTT 880
| || ||||| ||| |||| || || || | || | ||| |||| |||||||| |||||
Sbjct 835 ATATATTGCAACGTTTGCTCGATGAATGTA-GAAGAGATCAAGAAGGTAACACAATGGTC 893
Query 881 AATCACTTGCTCTCTTTGCAACAGGACGACCCTGAGTACTACACTGACATCATTATCAAA 940
||||| ||||||||| | ||||| | || |||||||| ||||||||| | || ||||||
Sbjct 894 AATCATTTGCTCTCTCTACAACAACAAGAACCTGAGTATTACACTGACGTTATCATCAAA 953
Query 941 GGC-TTAATGCTGG-GTATAATGGTTGCCTC-ATCAGAGACCTCCGCTTTGACAATAGAG 997
||| ||| || || | || ||| | ||| | | ||||||||||| | ||| |||||
Sbjct 954 GGCCTTA-TGATGTCG-ATGATGCTCGCCGGGA-CTGAGACCTCCGCCGTAACATTAGAG 1010
Query 998 TGGGCGATGGCGAGTTTGTTGA-ACCACCCAAAAGTTTTGGACAAAGTAAAATTAGAGAT 1056
||||||||||||| ||| ||| | | ||| |||| ||||| || | | || |||||
Sbjct 1011 TGGGCGATGGCGAATTTACTGAGAA-ATCCACAAGTATTGGAGAAGGCGAGATCGGAGAT 1069
Query 1057 CGACGAGATA-ATCGGACAAGACCGTTTGATCGAAGAATCA-GACATAGCAAACCTTCCT 1114
|| |||| | |||||| |||| || | ||||| || || ||||| || ||||||
Sbjct 1070 AGATGAGA-AGATCGGAAAAGATCGACTAATCGACGAG-CAAGACATCGCCGTGCTTCCT 1127
Query 1115 TACCTCCAAAACGTAGTATCCGAGACACTCCGGCTACATCCAGCAGCGCCGGTTCTTGTG 1174
|||||||| ||||| || ||||| ||| |||||||| ||| | || ||| |||| |
Sbjct 1128 TACCTCCAGAACGTCGTCTCCGAAACATTCCGGCTATTTCCGGTGGCACCGTTTCTAATC 1187
Query 1175 CCAAGATCAAC-AGCAGAAGACATCAAGATCGGAGGATACGATGTGCCACGTGACACAAT 1233
|| ||||| | | | || || || || ||||| || ||||| || || || || || ||
Sbjct 1188 CCTCGATCACCGA-CGGAGGATATGAAAATCGGCGGTTACGACGTCCCGCGAGATACGAT 1246
Query 1234 GGTAATGGTGAACGCGTGGGCGATACATAGAGATCCAGATCTTTGG-ACCGAACCGGAGA 1292
|| ||||| ||||| ||||| ||||||||||||||||| |||||| | || || ||||
Sbjct 1247 AGTGATGGTAAACGCTTGGGCTATACATAGAGATCCAGAGCTTTGGGAG-GAGCCAGAGA 1305
Query 1293 GGTTTAACCCTGAGAGGT-TCAACGGTGGA-GAAGGA-GAAAAAGATGATGTTCGTATGC 1349
|||||| || || ||| | |||| ||| | ||| | | || ||||| | ||
Sbjct 1306 AGTTTAATCCAGATCGGTAT-AACGAAGGATGC-GGAAGTGATT-ATTATGTTTACAAGC 1362
Query 1350 TGATAGC-GTTTGG-AAGCGGACGGAGAA-TATGTCCCGGTGTTGGACTAGCG-CACAAG 1405
|||| || |||||| || || ||||||| | |||||||| | ||| ||| | || | |
Sbjct 1363 TGAT-GCCGTTTGGGAAT-GGCCGGAGAACT-TGTCCCGGCGCCGGATTAG-GTCAGAGG 1418
Query 1406 ATTGTGACATTAGCG-TTAGGATCGTTAATTCAATGCTTTGATTGGAAAAAGGTGAACGA 1464
||||||||||| ||| || |||||||| |||||||||||||| ||| | || ||||| |
Sbjct 1419 ATTGTGACATTGGCGCTT-GGATCGTTGATTCAATGCTTTGAATGGGAGAATGTGAAAGG 1477
Query 1465 AAAAGAGATTGATATGAGTGAGGGTCCGGGGATGGCTATGCGTATGATGG-TGCCGTTAC 1523
| ||||||| |||||| |||| || | ||| ||| |||||||| ||||| | || ||||
Sbjct 1478 AGAAGAGATGGATATGTCTGAGAGTGCTGGGTTGGGTATGCGTAAGATGGAT-CCTTTAC 1536
Query 1524 GAGCCTTGTGTAAGACTC-GACCCATAATGAATAAGCT 1560
| ||| |||||| | | | | ||||| ||| ||||||
Sbjct 1537 GGGCCATGTGTAGGCC-CAGGCCCATTATGTCTAAGCT 1573
> Ahg490885 jgi|Araly1|490885|fgenesh2_kg.7__318__AT4G37370.1
Length=1539
Score = 73.1 bits (39), Expect = 6e-12
Identities = 51/57 (89%), Gaps = 0/57 (0%)
Strand=Plus/Plus
Query 431 TCTTACGGTGACCACTGGCGTAACCTCCGCCGCATTTGCTCCCTCGAAATCGTCTCC 487
||||||||||||||||||||||||||||||||||| ||||| |||| || |||||
Sbjct 362 TCTTACGGTGACCACTGGCGTAACCTCCGCCGCATCGGCTCCGTCGAGATATTCTCC 418
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 64601055520
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5