BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT4G37640.1
Length=3426
Score E
Sequences producing significant alignments: (Bits) Value
Ahg490855 jgi|Araly1|490855|fgenesh2_kg.7__288__AT4G37640.1 5334 0.0
Ahg899595 jgi|Araly1|899595|Al_scaffold_0004_245 3166 0.0
> Ahg490855 jgi|Araly1|490855|fgenesh2_kg.7__288__AT4G37640.1
Length=3341
Score = 5334 bits (2888), Expect = 0.0
Identities = 3188/3331 (96%), Gaps = 27/3331 (1%)
Strand=Plus/Plus
Query 63 AAACAAAAAAGCCATTGAAGCTGGAAGACa-aaaaaaaCAGAGGAGATTGAAGAAGAAGA 121
||| |||||||||||||||||||||||| | |||||||||||| |||||||||||| | |
Sbjct 34 AAAAAAAAAAGCCATTGAAGCTGGAAGA-AGAAAAAAACAGAGAAGATTGAAGAAG-A-A 90
Query 122 GGGAGTAAGAAGATGGAGAGTTACCTAAACGAGAATTTCGATGTGAAAGCGAAGCATTCT 181
|||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 91 -GGAGGAAGAAGATGGAGAGTTACCTAAACGAGAATTTCGATGTGAAGGCGAAACATTCT 149
Query 182 TCAGAGGAAGTGCTTGAGAAATGGCGTAATCTCTGTGGCGTTGTTAAGAACCCTAAACGT 241
|||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct 150 TCAGAGGAAGTGCTTGAGAAATGGCGTAATCTCTGTAGCGTTGTCAAGAACCCTAAACGT 209
Query 242 CGGTTTCGTTTCACCGCTAATCTCTCTAAACGCTATGAAGCCGCCGCGATGCGTCGCACC 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 210 CGGTTTCGTTTCACCGCTAATCTCTCTAAACGCTATGAAGCCGCCGCGATGCGTCGCACC 269
Query 302 AACCAGGAGAAATTAAGGATCGCTGTTCTTGTTTCCAAAGCTGCTTTCCAATTTATCTCT 361
||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||
Sbjct 270 AACCAGGAGAAATTAAGGATCGCTGTTCTCGTGTCTAAAGCTGCTTTCCAATTTATCTCT 329
Query 362 GGTGTTTCTCCAAGTGACTACACTGTCCCTGAAGATGTCAAAGCTGCTGGCTTTGAGATT 421
|||||| ||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 330 GGTGTTGCTCCAAGTGACTACACTGTACCTGAAGAAGTCAAAGCTGCTGGCTTTGAGATT 389
Query 422 TGTGCTGACGAATTAGGATCAATTGTTGAAAGTCATGATGTTAAGAAGCTCAAGTTCCAT 481
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 390 TGTGCTGACGAATTGGGATCAATTGTTGAGAGTCATGATGTTAAGAAGCTCAAGTTCCAT 449
Query 482 GGTGGAGTTGATGGGCTTGCAGGTAAGCTCAAGGCATCTCCCACAGATGGCCTTTCTACT 541
||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||
Sbjct 450 GGTGGAGTTGATGGGCTTGCAGGTAAGCTCAAGGCTTCTCCTACAGATGGGCTTTCGACT 509
Query 542 GAGGCTGCTCAGTTATCCCAAAGGCAAGAGCTTTTCGGAATCAACAAGTTTGCAGAGAGC 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 510 GAGGCTGCTCAGTTATCCCAAAGGCAAGAGCTTTTCGGAATCAACAAGTTTGCAGAGAGC 569
Query 602 GAAATGAGGGGTTTCTGGGTGTTTGTATGGGAAGCTCTTCAGGATATGACTCTTATGATT 661
|||||| | ||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct 570 GAAATGCGCGGTTTCTGGGTGTTTGTTTGGGAAGCTCTTCAAGATATGACTCTTATGATT 629
Query 662 CTTGGTGTTTGTGCTTTCGTGTCTTTGATTGTTGGGATAGCTACTGAAGGATGGCCTAAA 721
||||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 630 CTTGGTGTTTGCGCTTTCGTGTCTTTGATCGTTGGGATTGCTACTGAAGGATGGCCTAAA 689
Query 722 GGATCACATGATGGTCTTGGCATTGCGGCTAGTATTCTCTTGGTTGTGTTTGTTACAGCT 781
|| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 690 GGGTCACATGATGGTCTTGGCATTGTGGCTAGTATTCTCTTGGTTGTGTTTGTTACAGCT 749
Query 782 ACTAGCGATTACCGCCAGTCTTTGCAGTTCCGTGATTTGGATAAAGAGAAGAAGAAGATC 841
||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 750 ACTAGCGATTATCGCCAGTCTTTGCAGTTCCGGGATTTGGATAAGGAGAAGAAGAAGATC 809
Query 842 ACTGTTCAGGTGACAAGGAACGGGTTTAGACAGAAACTGTCGATTTACGACTTGCTTCCT 901
|||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||
Sbjct 810 ACTGTTCAGGTGACGAGGAACGGGTTTAGACAGAAACTGTCGATATATGACTTGCTTCCC 869
Query 902 GGTGACATTGTTCATCTGGCGATTGGAGATCAGGTTCCTGCTGATGGTCTTTTCCTCTCG 961
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 870 GGTGACATTGTTCATCTGGCGATTGGAGATCAGGTTCCTGCTGATGGTCTTTTCCTCTCC 929
Query 962 GGATTCTCTGTGGTGATAGATGAATCGAGTTTGACTGGTGAAAGTGAGCCTGTGATGGTG 1021
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 930 GGATTCTCCGTGGTGATAGATGAATCGAGTTTGACTGGCGAAAGTGAGCCTGTGATGGTG 989
Query 1022 AATGCGCAGAATCCTTTCCTTATGTCTGGAACCAAAGTGCAAGATGGATCTTGTAAGATG 1081
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 990 AATGCGCAGAATCCTTTCCTTATGTCTGGAACCAAAGTGCAAGATGGATCTTGTAAGATG 1049
Query 1082 ATGATTACTACAGTTGGGATGAGGACTCAATGGGGAAAGCTAATGGCGACTTTGACCGAA 1141
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1050 ATGATTACTACAGTTGGGATGAGGACTCAATGGGGAAAGCTAATGGCGACTTTGACTGAA 1109
Query 1142 GGAGGGGATGATGAAACTCCACTGCAGGTGAAACTCAATGGAGTTGCTACCATCATTGGC 1201
||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1110 GGAGGGGATGACGAAACTCCTTTGCAGGTGAAACTCAATGGAGTTGCTACCATCATTGGC 1169
Query 1202 AAAATTGGTCTTTTCTTTGCGGTGGTTACTTTCGCGGTTCTGGTGCAAGGAATGTTTATG 1261
||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||
Sbjct 1170 AAAATTGGTCTTTTCTTTGCGGTTGTTACTTTCGCAGTTTTGGTGCAAGGAATGTTTATG 1229
Query 1262 AGGAAGCTTTCAACGGGAACTCACTGGGTCTGGTCTGGTGATGAAGCATTGGAGCTCTTG 1321
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1230 AGGAAGCTTTCAACGGGAACTCACTGGATCTGGTCTGGTGATGAAGCATTGGAGCTCTTG 1289
Query 1322 GAATACTTTGCTATTGCTGTGACAATCGTTGTGGTTGCGGTTCCTGAAGGATTGCCTTTA 1381
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1290 GAATACTTTGCTATTGCCGTGACAATCGTTGTGGTTGCGGTTCCTGAGGGATTGCCTTTA 1349
Query 1382 GCTGTGACTCTAAGTCTTGCGTTTGCCATGAAGAAAATGATGAACGATAAAGCTCTTGTG 1441
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1350 GCTGTGACTCTTAGTCTTGCGTTTGCGATGAAGAAAATGATGAACGATAAAGCTCTTGTC 1409
Query 1442 AGGCATTTAGCAGCATGTGAGACTATGGGATCTGCAACGACGATTTGCAGTGACAAGACT 1501
| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 1410 CGACATTTAGCAGCATGTGAGACTATGGGATCTGCGACAACGATTTGCAGTGACAAGACC 1469
Query 1502 GGTACACTCACAACCAATCACATGACCGTTGTGAAGTCTTGCATTTGCATGAATGTGCAA 1561
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1470 GGTACACTCACAACCAATCACATGACCGTTGTGAAGTCTTGCATTTGCATGAACGTGCAA 1529
Query 1562 GATGTAGCAAATAAAGGTTCTAGCTTGCAATCAGAAATCCCGGAATCTGCGGTGAAGTTG 1621
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1530 GATGTAGCAAATAAAGGTTCTAGCTTGCAATCAGAAATCCCGGAATCTGCTGTGAAGTTG 1589
Query 1622 TTGATTCA-ATCGATTTTCAATAACACAGGAGGCGAAGTTGTTGTCAACAAACATGGGAA 1680
|||||||| | |||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 1590 TTGATTCAGA-CGATTTTCAATAACACGGGAGGCGAAGTTGTTGTCAACAAACACGGGAA 1648
Query 1681 AACCGAGCTTTTGGGGACGCCAACAGAGACTGCTATATTAGAGTTGGGGTTATCTCTTGG 1740
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1649 AACCGAGCTTTTGGGGACGCCAACAGAGACAGCTATATTAGAGTTTGGGTTATCTCTTGG 1708
Query 1741 AGGTAAGTTCCAAGAAGAGAGGAAGTCTTACAAAGTGATCAAAGTTGAGCCTTTCAACTC 1800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1709 AGGTAAGTTCCAAGAAGAGAGGAAGTCTTACAAAGTGATCAAAGTTGAGCCTTTCAACTC 1768
Query 1801 CACAAAGAAGCGAATGGGAGTTGTAATCGAGCTTCCTGAGGGAGGACGTATGCGTGCTCA 1860
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 1769 CACAAAGAAGCGAATGGGAGTTGTAATCGAGCTTCCTGAGGGAGGAAGTCTGCGTGCTCA 1828
Query 1861 CACGAAAGGAGCTTCCGAGATTGTTTTAGCTGCTTGTGACAAAGTTGTAAACTCGAGCGG 1920
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 1829 CACGAAAGGAGCTTCCGAGATAGTTTTAGCTGCTTGTGATAAAGTTGTAAACTCGAGCGG 1888
Query 1921 TGAGGTTGTTCCACTTGATGAAGAATCAATCAAGTATCTGAATGTTACAATCAACGAGTT 1980
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1889 TGAAGTTGTTCCACTTGATGAAGAATCAATCAAGTATCTGAATGTTACCATCAACGAGTT 1948
Query 1981 TGCTAATGAAGCTCTTCGAACTCTTTGCCTTGCTTATATGGATATTGAAGGCGGGTTTTC 2040
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1949 TGCTAATGAAGCTCTTCGAACTCTTTGCCTTGCTTATATGGATATTGAAGGCGGGTTTTC 2008
Query 2041 GCCGGATGATGCAATCCCGGCTTCTGGATTTACTTGCGTAGGGATTGTGGGAATCAAAGA 2100
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2009 GCCGGATGATGCAATCCCGGCTTCTGGATTTACTTGCGTAGGGATTGTGGGGATCAAAGA 2068
Query 2101 TCCCGTACGTCCTGGAGTTAAAGAATCTGTTGAGCTTTGTCGCCGTGCTGGAATCACTGT 2160
||| || ||||||||||| |||||||| |||||||||||||| |||||||||||||||||
Sbjct 2069 TCCTGTTCGTCCTGGAGTCAAAGAATCCGTTGAGCTTTGTCGTCGTGCTGGAATCACTGT 2128
Query 2161 GAGGATGGTTACAGGAGATAACATTAACACCGCGAAAGCAATTGCTAGAGAATGTGGGAT 2220
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2129 GAGAATGGTTACAGGAGATAACATTAACACCGCGAAAGCAATTGCTAGAGAATGTGGGAT 2188
Query 2221 TTTAACTGATGACGGTATAGCCATCGAAGGTCCCGTATTCAGAGAGAAGAATCAAGAAGA 2280
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2189 TTTAACTGATGACGGTATAGCCATCGAGGGTCCCGTATTCAGAGAGAAGAATCAAGAAGA 2248
Query 2281 GTTACTAGAACTGATTCCAAAGATTCAGGTGATGGCTCGTTCTTCACCAATGGATAAGCA 2340
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||
Sbjct 2249 GTTACTAGAACTGATTCCAAAGATTCAGGTGATGGCCCGTTCTTCGCCAATGGATAAACA 2308
Query 2341 TACACTTGTGAAACAGTTAAGGACAACGTTTGATGAAGTTGTTGCTGTCACTGGAGATGG 2400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2309 TACACTTGTGAAACAGTTAAGGACAACGTTTGATGAAGTTGTTGCTGTCACTGGAGATGG 2368
Query 2401 AACAAATGATGCACCTGCACTTCATGAAGCTGATATTGGACTAGCAATGGGAATTGCTGG 2460
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 2369 AACAAATGATGCACCTGCACTTCATGAAGCTGATATCGGACTAGCTATGGGAATTGCTGG 2428
Query 2461 AACTGAAGTGGCGAAAGAGAGCGCTGATGTCATCATTCTCGACGATAACTTCAGCACGAT 2520
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2429 AACTGAAGTGGCGAAAGAGAGCGCTGATGTCATCATTCTCGACGATAACTTCAGCACGAT 2488
Query 2521 CGTCACAGTTGCTAAATGGGGACGTTCTGTTTACATAAACATCCAGAAATTCGTTCAGTT 2580
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2489 CGTCACAGTTGCTAAATGGGGACGTTCTGTTTACATAAACATACAGAAATTCGTTCAGTT 2548
Query 2581 TCAGCTTACCGTTAATGTTGTTGCACTGGTTGTTAACTTCTCTTCAGCTTGTTTAACCGG 2640
||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 2549 TCAGCTTACGGTTAATGTTGTTGCTCTGGTTGTTAACTTCTCTTCAGCTTGCTTAACCGG 2608
Query 2641 AAGTGCTCCTTTAACTGCTGTTCAATTGTTGTGGGTGAACATGATCATGGACACACTTGG 2700
|||||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||
Sbjct 2609 AAGTGCTCCTTTAACTGCTGTTCAGTTGCTATGGGTGAACATGATCATGGACACACTTGG 2668
Query 2701 AGCTCTTGCTTTAGCTACAGAGCCACCAAACGACGAGCTGATGAAGCGTTTACCTGTTGG 2760
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct 2669 AGCTCTTGCTTTAGCTACAGAGCCACCAAATGACGAGCTGATGAAGCGTTTACCCGTTGG 2728
Query 2761 AAGGAGAGGCAATTTCATCACTAATGCGATGTGGAGGAACATTTTAGGACAAGCTGTTTA 2820
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2729 AAGGAGAGGGAATTTCATCACTAATGCGATGTGGAGGAACATTTTAGGACAAGCTGTTTA 2788
Query 2821 CCAATTCATCGTAATTTGGATTCTCCAAGCCAAAGGGAAGGCTATGTTTGGTCTCGACGG 2880
||||||||||| ||||||||||||||||||||||||||| ||||||||||||| || ||
Sbjct 2789 TCAATTCATCGTCATTTGGATTCTCCAAGCCAAAGGGAAGTCTATGTTTGGTCTTGAAGG 2848
Query 2881 TCCTGACTCAACTCTCATGTTAAACACTCTTATCTTCAACTGCTTCGTCTTCTGTCAGGT 2940
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2849 CCCTGACTCAACTCTCATGTTAAACACTCTTATCTTCAACTGCTTCGTCTTCTGTCAGGT 2908
Query 2941 GTTTAACGAGATAAGCTCGCGAGAGATGGAAGAGATCGATGTTTTCAAAGGAATACTGGA 3000
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2909 GTTTAACGAGATAAGCTCGCGAGAGATGGAAGAGATCGATGTTTTCAAGGGAATACTGGA 2968
Query 3001 CAATTACGTCTTTGTGGTTGTGATCGGTGCAACGGTTTTCTTTCAGATCATAATCATCGA 3060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 2969 CAATTACGTCTTTGTGGTTGTGATCGGTGCAACGGTTTTCTTTCAGATCATAATCATTGA 3028
Query 3061 GTTCTTGGGCA-CATTTGCAAGCACAACACCACTCACAATAACACAATGGATCTTCAGTA 3119
||||||||| | | |||||||||||||||||||||||| | || ||||||||||||||||
Sbjct 3029 GTTCTTGGG-ATCTTTTGCAAGCACAACACCACTCACATTGACCCAATGGATCTTCAGTA 3087
Query 3120 TCTTCATAGGTTTCTTGGGTATGCCAATCGCCGCTGGACTGAAGACGATTCCCGTTTGAT 3179
|| || ||||||||||||||||||||||||| || ||| |||||||||||||||||||||
Sbjct 3088 TCGTCGTAGGTTTCTTGGGTATGCCAATCGCTGCAGGATTGAAGACGATTCCCGTTTGAT 3147
Query 3180 CGTTCCATCAAAATTGGCTCGAAACCACTCTTTAAAGATCTCTATATTAGACCAGTTACT 3239
|| |||||| |||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 3148 CGATCCATCGAAATTGGCGCGAAACCTCTCTTTAAAGATCTCTATATTAGACCAGTTACT 3207
Query 3240 TCAAAGTTT-AGAACGGACAAGTCTTCTAACAAAGTTTTTGCATTATGCAATGACTCTGT 3298
|||| |||| |||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 3208 TCAA-GTTTTAGAACGGACAAGTCTTCTAACAAAGTTTTTGCCTTTTGCAATGACTCTGT 3266
Query 3299 TTTTTATTCTTGACTTTTATTTTTCAGTTTGATTAGTGCTATTAAGGACAAATATCTGAT 3358
||||| || || | | |||||||||| |||||||||||||||||||||||
Sbjct 3267 TTTTT-TT-TT--C----A-------GTTTGATTAGGGCTATTAAGGACAAATATCTGAT 3311
Query 3359 TTCCTCCATTTTTGTAAAACTCTCTGTATCT 3389
||| ||||||||||||||||||||||| |||
Sbjct 3312 TTC-TCCATTTTTGTAAAACTCTCTGTTTCT 3341
> Ahg899595 jgi|Araly1|899595|Al_scaffold_0004_245
Length=3048
Score = 3166 bits (1714), Expect = 0.0
Identities = 2626/3070 (86%), Gaps = 47/3070 (2%)
Strand=Plus/Plus
Query 134 ATGGAGAGTTACCTAAAC-GAGAATTTCGATGTGAAAGCGAAGCATTCTTCAGAGGAAGT 192
|||||||||||||| ||| | |||||||| || || ||||||||||| |||||||||||
Sbjct 1 ATGGAGAGTTACCTCAACTCA-AATTTCGACGTTAAGGCGAAGCATTCGTCAGAGGAAGT 59
Query 193 GCTTGAGAAATGGCGTAATCTCTGTGGCGTTGTTAAGAACCCTAAACGTCGGTTTCGTTT 252
||||| |||||||| ||||| || | || || || ||||| |||||||||||||| ||
Sbjct 60 TCTTGAAAAATGGCGGAATCTTTGCAGTGTCGTCAAAAACCCGAAACGTCGGTTTCGCTT 119
Query 253 CACCGCTAATCTCTCTAAACGCTATGAAGCCGCCGCGATGCGTCGCACCAACCAGGAGAA 312
||| || |||||||| || || || ||||| || || ||||| ||||||||||| || ||
Sbjct 120 CACTGCCAATCTCTCCAAGCGTTACGAAGCTGCTGCCATGCGACGCACCAACCAAGAAAA 179
Query 313 ATTAAGGATCGCTGTTCTTGTTTCCAAAGCTGCTTTCCAATTTATCTCTGGTGTTTCTCC 372
||||||||| || |||||||| || ||||| || |||||||| |||||||||||||||||
Sbjct 180 ATTAAGGATTGCAGTTCTTGTGTCAAAAGCCGCATTCCAATTCATCTCTGGTGTTTCTCC 239
Query 373 AAGTGACTACACTGTCCCTGAAGATGTCAAAGCTGCTGGCTTTGAGATTTGTGCTGACGA 432
||||||||| | || |||||||| || ||||| || |||||||| |||||||| || ||
Sbjct 240 AAGTGACTATAAGGTGCCTGAAGAAGTTAAAGCAGCAGGCTTTGACATTTGTGCAGATGA 299
Query 433 ATTAGGATCAATTGTTGAAAGTCATGATGTTAAGAAGCTCAAGTTCCATGGTGGAGTTGA 492
||||||||||| || ||| |||||||||| ||||||||||||||||||||||| |||||
Sbjct 300 GTTAGGATCAATAGTGGAAGGTCATGATGTGAAGAAGCTCAAGTTCCATGGTGGTGTTGA 359
Query 493 TGGGCTTGCAGGTAAGCTCAAGGCATCTCCCACA-GATGGCCTTTCTACTGAGG---CTG 548
||| ||| |||||||||| ||||||| ||||| | | ||| || || || | || |||
Sbjct 360 TGGTCTTTCAGGTAAGCTTAAGGCATGTCCCA-ATGCTGGTCTCTCAACAGGGGAACCTG 418
Query 549 -CTCAGTTATCCCAAA-GGCAAGAGCTTTTCGGAATCAACAAGTTTGCAGAGAGCGAAAT 606
| |||||| |||| | |||||||||||||||||||| |||||||| ||||| | |||
Sbjct 419 AC-CAGTTA-AACAAACGACAAGAGCTTTTCGGAATCAATAAGTTTGCGGAGAGTG-AAT 475
Query 607 GA-GGGGTTTCTGGGTGTTTGTATGGGAAGCTCTTCAGGATATGACTCTTATGATTCTTG 665
| || |||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||
Sbjct 476 TACGGAGTTTTTGGGTGTTTGTTTGGGAAGCACTTCAAGATATGACTCTTATGATTCTTG 535
Query 666 GTGTTTGTGCTTTCGTGTCTTTGATTGTTGGGATAGCTACTGAAGGATGGCCTAAAGGAT 725
||||||| |||||||| |||||||| ||||| || || |||||||||||||| |||| |
Sbjct 536 GTGTTTGCGCTTTCGTTTCTTTGATAGTTGGAATTGCAACTGAAGGATGGCCCCAAGGGT 595
Query 726 CACATGATGGTCTTGGCATTGCGGCTAGTATTCTCTTGGTTGTGTTTGTTACAGCTACTA 785
||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||
Sbjct 596 CACATGATGGTCTTGGCATTGTTGCTAGTATTCTTTTGGTTGTGTTTGTGACAGCTACTA 655
Query 786 GCGATTACCGCCAGTCTTTGCAGTTCCGTGATTTGGATAAAGAGAAGAAGAAGATCACTG 845
||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| |
Sbjct 656 GCGATTATCGCCAGTCTTTGCAGTTCCGGGATTTGGATAAGGAGAAGAAGAAGATCACGG 715
Query 846 TTCAGGTGACAAGGAACGGGTTTAGACAGAA-ACTGTCGATTTACGACTTGCTTCCTGGT 904
|||| || || | ||||||||||||||||| | |||| || || || ||||| ||||||
Sbjct 716 TTCAAGTTACGCGAAACGGGTTTAGACAGAAGA-TGTCTATATATGATTTGCTCCCTGGT 774
Query 905 GACATTGTTCATCTGGCGATTGGAGATCAGGTTCCTGCTGATGGTCTTTTCCTCTCGGGA 964
|| |||||||||| || ||||||||||| ||||| || |||||||||||||||||||||
Sbjct 775 GATGTTGTTCATCTTGCTATTGGAGATCAAGTTCCCGCGGATGGTCTTTTCCTCTCGGGA 834
Query 965 TTCTCTGTGGTGATAGATGAATCGAGTTTGACTGGTGAAAGTGAGCCTGTGATGGTGAAT 1024
|||||||| || || |||||||||||||| |||||||| ||||||||||||||||||| |
Sbjct 835 TTCTCTGTTGTTATCGATGAATCGAGTTTAACTGGTGAGAGTGAGCCTGTGATGGTGACT 894
Query 1025 GCGCAGAATCCTTTCCTTATGTCTGGAACCAAAGTGCAAGATGGATCTTGTAAGATGATG 1084
|| || || ||||| ||| | |||||||||||||| |||||||| |||||||||||| ||
Sbjct 895 GCACAAAACCCTTTTCTTCTCTCTGGAACCAAAGTTCAAGATGGGTCTTGTAAGATGCTG 954
Query 1085 ATTACTACAGTTGGGATGAGGACTCAATGGGGAAAGCTAATGGCGAC-TTTGACCGAAGG 1143
|||| |||||||||||||| ||||||||||||||| ||||||| || || | |||||
Sbjct 955 GTTACAACAGTTGGGATGAGAACTCAATGGGGAAAGTTAATGGCAACACTT-AGTGAAGG 1013
Query 1144 AGGGGATGATGAAACTCCACTGCAGGTGAAACTCAATGGAGTTGCTACCATCATTGGCAA 1203
||| ||||| |||||||| |||| |||||||| ||||||||||| ||||||||||| ||
Sbjct 1014 AGGCGATGACGAAACTCCGTTGCAAGTGAAACTTAATGGAGTTGCAACCATCATTGGAAA 1073
Query 1204 AATTGGTCTTTTCTTTGCGGTGGTTA-CTTTCGCGGTTCTGGTGCAAGGAATGTTTATGA 1262
||| ||||||||||| || | |||| |||| |||||| |||||||||||||||||||||
Sbjct 1074 AATCGGTCTTTTCTTCGCTATTGTTACCTTT-GCGGTTTTGGTGCAAGGAATGTTTATGA 1132
Query 1263 GGAAGCTTTCAACGGGAACTCACTGGGT-CTGGTCTGGTGATGAAGCATTGGAGCTCTTG 1321
||||||||||| ||||||||| | ||| |||||||| ||||| ||||||||||| |||
Sbjct 1133 GGAAGCTTTCATTGGGAACTCA-TTGGTGGTGGTCTGGAGATGATGCATTGGAGCTTTTG 1191
Query 1322 GAATACTTTGCTATTGCTGTGACAATCGTTGTGGTTGCGGTTCCTGAAGGATTGCCTTTA 1381
|| || |||||||||||||| ||||| ||||| || |||||||||||||| || || |||
Sbjct 1192 GAGTATTTTGCTATTGCTGTCACAATTGTTGTCGTCGCGGTTCCTGAAGGTTTACCATTA 1251
Query 1382 GCTGTGACTCTAAGTCTTGCGTTTGCCATGAAGAAAATGATGAACGATAAAGCTCTTGTG 1441
||||| ||||| ||||| || ||||| |||||||| ||||||||||||||||| |||||
Sbjct 1252 GCTGTCACTCTTAGTCTCGCCTTTGCGATGAAGAAGATGATGAACGATAAAGCGCTTGTT 1311
Query 1442 AGGCATTTAGCAGCATGTGAGACTATGGGATCTGCAACGACGATTTGCAGTGACAAGACT 1501
| ||||| ||||| ||||| || |||||||||||||| || ||||| ||||||||||||
Sbjct 1312 CGTCATTTGGCAGCTTGTGAAACAATGGGATCTGCAACTACTATTTGTAGTGACAAGACT 1371
Query 1502 GGTACACTCACAACCAATCACATGACCGTTGTGAAGTCTTGCATTTGCATGAATGTGCAA 1561
|||||| | ||||| ||||||||||| |||||||| ||||||||||| |||||||| |||
Sbjct 1372 GGTACATTAACAACAAATCACATGACTGTTGTGAAATCTTGCATTTGTATGAATGTTCAA 1431
Query 1562 GATGTAGCAAATAAAGGTTCTAGCTTGCAATCAGAAATCCCGGAA-TCTGCGGTG-AAGT 1619
|||||||| | |||||||| || || || || ||||| || ||| | ||| || || |
Sbjct 1432 GATGTAGCTAGCAAAGGTTCAAGTTTACAGTCTGAAATACCTGAAGT-TGCTTTGAAACT 1490
Query 1620 TGTTGATTCAATCGATTTTCAATAACACAGGAGGCGAAGTTGTTGTCAACAAACATGGGA 1679
|| | ||||||||||| ||||| || || |||||||||||||| ||| ||| ||| |
Sbjct 1491 ACTT-CTCCAATCGATTTTTAATAATACCGGTGGCGAAGTTGTTGTGAACGAACGTGGCA 1549
Query 1680 AAACCGAGCTTTTGGGGACGCCAACAGAGACTGCTATATTAGAGTTGGGGTTATCTCTTG 1739
| || ||| | |||||||| ||||||||||| |||||||||||||| |||||||||||||
Sbjct 1550 AGACTGAGATATTGGGGACACCAACAGAGACAGCTATATTAGAGTTTGGGTTATCTCTTG 1609
Query 1740 GAGGTAAGTTCCAAGAAGAGAGG-AAGTCTTACAAAGTGATCAAAGTTGAGCCTTTCAAC 1798
|||||||||||||||||||||| || ||||||||||| ||||||||||||||||| |||
Sbjct 1610 GAGGTAAGTTCCAAGAAGAGAGACAA-TCTTACAAAGTTATCAAAGTTGAGCCTTTTAAC 1668
Query 1799 TCCACAAAGAAGCGAATGGGAGTTGTAATCGAGCTTCCTGAGGGAGGACGTATGCGTGCT 1858
|||||||||||| |||||||||| || || ||||| ||||| |||||||| || ||||||
Sbjct 1669 TCCACAAAGAAGAGAATGGGAGTAGTGATTGAGCTGCCTGAAGGAGGACGCATTCGTGCT 1728
Query 1859 CACACGAAAGGAGCTTCCGAGATTGTTTTAGCTGCTTGTGACAAAGTTGTAAACTCGAGC 1918
||||||||||||||||| ||||| |||||||| ||||| || ||||| | ||||| |||
Sbjct 1729 CACACGAAAGGAGCTTCAGAGATAGTTTTAGCGGCTTGCGATAAAGTCATCAACTCAAGC 1788
Query 1919 GGTGAGGTTGTTCCACTTGATGAAGAATCAATCAAGTATCT-GAATGTTACAATCAACGA 1977
||||| |||||||| |||||||| ||||| ||||||| ||| |||||| |||||| | ||
Sbjct 1789 GGTGAAGTTGTTCCGCTTGATGACGAATCTATCAAGT-TCTTGAATGTCACAATCGATGA 1847
Query 1978 GTTTGCTAATGAAGCTCTTCGAACTCTTTGCCTTGCTTATATGGATATTGAAGGCGGGTT 2037
|||||| |||||||||||||| || ||||||||||||||||||||||| ||| |||||
Sbjct 1848 GTTTGCAAATGAAGCTCTTCGTACACTTTGCCTTGCTTATATGGATATCGAAAATGGGTT 1907
Query 2038 TTC-GCCGGATGATGCAATCCCGGCTTCTGGATTTACTTGCGTAGGGATTGTGGGAATCA 2096
||| || |||||| | || |||||| || ||||||||| |||||||||| || ||||
Sbjct 1908 TTCTGC-GGATGAAGGTATTCCGGCTAGAGGGTTTACTTGCATAGGGATTGTTGGTATCA 1966
Query 2097 AAGATCCC-GTACGTCCTGGAGTTAAAGAA-TCTGTTGAGCTTTGTCGCCGTGCTGGAAT 2154
|||| ||| |||||||||||||||| ||| || || || ||||||||||| || || ||
Sbjct 1967 AAGA-CCCTGTACGTCCTGGAGTTAG-GAAGTCCGTGGAACTTTGTCGCCGAGCAGGTAT 2024
Query 2155 CACTG-TGAGGATGGTTACAGGAGATAACATTAACACCGCGAAAG-CAATTGCTAGAGAA 2212
| || |||| ||||||||||||||||||||||||||||| |||| | ||||||||||||
Sbjct 2025 TA-TGGTGAGAATGGTTACAGGAGATAACATTAACACCGC-AAAGGCTATTGCTAGAGAA 2082
Query 2213 TGTGGGATTTTAACTGATGACGGTATAGCCATCGAAGGTCCCGTATTCAGAGAGAAGAAT 2272
||||| ||| | |||||||| |||||||| || |||||||| || || ||||||||||||
Sbjct 2083 TGTGGAATTCTCACTGATGATGGTATAGCAATTGAAGGTCCTGTGTTTAGAGAGAAGAAT 2142
Query 2273 CAAGAAGAGTTACTAGAACTGATTCCAAAGATTCAGGTGATGGCTCGTTCTTCACCAATG 2332
||||||||| | || ||||| ||||| |||||||||||||||||||||||||| || |||
Sbjct 2143 CAAGAAGAGATGCTGGAACTCATTCCCAAGATTCAGGTGATGGCTCGTTCTTCGCCTATG 2202
Query 2333 GATAAGCATACACTTGTGAAACAGTTAAGGACAACGTTTGATGAAGTTGTTGCTGTCACT 2392
|| ||||||||||| ||||| ||||||||||| || ||||||||||||||||| || |||
Sbjct 2203 GACAAGCATACACTGGTGAAGCAGTTAAGGACCACTTTTGATGAAGTTGTTGCCGTGACT 2262
Query 2393 GGAGATGGAACAAATGATGCACCTGCACTTCATGAAGCTGATATTGGACTAGCAATGGGA 2452
|| || || ||||| |||||||| ||||| || || ||||| || ||| ||||||||||
Sbjct 2263 GGTGACGGGACAAACGATGCACCAGCACTCCACGAGGCTGACATAGGATTAGCAATGGGC 2322
Query 2453 ATTGCTGGAACTGAAGTGGCGAAAGAGAGCGCTGATGTCATCATTCTCGACGATAACTTC 2512
||||| ||||| ||||| |||||||||||||| ||||||||||||||||||||||| |||
Sbjct 2323 ATTGCCGGAACAGAAGTAGCGAAAGAGAGCGCGGATGTCATCATTCTCGACGATAATTTC 2382
Query 2513 AGCACGATCGTCACAGTTGCTAAATGGGGACGTTCTGTTTACATAAACATCCAGAAATTC 2572
||||| ||||||||||| || ||||||||||||||||||||||| ||||| ||||||||
Sbjct 2383 AGCACAATCGTCACAGTAGCGAAATGGGGACGTTCTGTTTACATTAACATACAGAAATTT 2442
Query 2573 GTTCAGTTTCAGCTTACCGTTAATGTTGTTGCACTGGTTGTTAACTTCTCTTCAGCTTGT 2632
|| ||||||||||| || || ||||||||||| || ||||||||||||||||||||||
Sbjct 2443 GTGCAGTTTCAGCTAACAGTCAATGTTGTTGCCCTCATTGTTAACTTCTCTTCAGCTTGC 2502
Query 2633 TTAACCGGAAGTGCTCCTTTAACTGCTGTTCAATTG-TTGTGGGTGAACATGATCATGGA 2691
|| || ||||||||||| |||||||||| ||| || || ||||| |||||||| |||||
Sbjct 2503 TTGACTGGAAGTGCTCCCCTAACTGCTGTGCAACTGCTT-TGGGTCAACATGATAATGGA 2561
Query 2692 CACACTTGGAGCTCTTGCTTTAGCTACAGAGCCACCAAACGACGAGCTGATGAAGCGTTT 2751
||||||||||||||||||| |||||||||| || || ||| ||||||||||||| ||| |
Sbjct 2562 CACACTTGGAGCTCTTGCTCTAGCTACAGAACCTCCGAACAACGAGCTGATGAAACGTAT 2621
Query 2752 ACCTGTTGGAAGGAGAGGCAATTTCATCACTAATGCGATGTGGAGGAACATTTTAGGACA 2811
||||||||||||||||| |||||||| || |||||||||||||||||||| ||||||||
Sbjct 2622 GCCTGTTGGAAGGAGAGGGAATTTCATTACCAATGCGATGTGGAGGAACATCTTAGGACA 2681
Query 2812 AGCTGTTTACCAATTCATCGTAATTTGGATTCTCCAAGCCAAAGGGAAGGCTATGTTTGG 2871
|||||| || |||||||| | ||||||||||| || |||||||||||| | ||||||||
Sbjct 2682 AGCTGTGTATCAATTCATTATCATTTGGATTCTTCAGGCCAAAGGGAAGTCCATGTTTGG 2741
Query 2872 TCTCGACGGTCCTGACTCAACTCTCATGTTAAACACTCTTATCTTCAACTGCTTCGTCTT 2931
||| | ||| ||||||| ||||| | |||||||| ||||||||||||||||| |||||
Sbjct 2742 TCTTGTTGGTTCTGACTCTACTCTTGTATTAAACACACTTATCTTCAACTGCTTTGTCTT 2801
Query 2932 CTGTCAGGTGTTT-AACGA-GATAAGCTCGCGAGAGATGGAAGAGATCGATGTTTTCAAA 2989
||||||||| ||| || || | ||||||| | ||||||||||||||||||||||| |||
Sbjct 2802 CTGTCAGGT-TTTCAATGAAG-TAAGCTCAAGGGAGATGGAAGAGATCGATGTTTTAAAA 2859
Query 2990 GGAATACTGGACAATTACGTCTTTGTGGTTGTGATCGGTGCAACGGTTTTCTTTCAGATC 3049
|| ||||| ||||| || |||||||||||||| || ||||||||||||||||||||||||
Sbjct 2860 GGCATACTCGACAACTATGTCTTTGTGGTTGTTATTGGTGCAACGGTTTTCTTTCAGATC 2919
Query 3050 ATAATCATCGAGTTCTTGGGCACATTTGCAAGCACAACACCACTCACAATAACACAATGG 3109
|||||||| |||||||||||||||||||||||||||||||| || |||||| ||||||
Sbjct 2920 ATAATCATTGAGTTCTTGGGCACATTTGCAAGCACAACACCTCTTACAATAGTTCAATGG 2979
Query 3110 ATCTTCAGTATCTTCATAGGTTTCTTGGGTATGCCAATCGCCGCTGGACT-GAAGACGAT 3168
||||||| || || | || |||||||||||||| ||||| ||||| || ||||| ||
Sbjct 2980 TTCTTCAGCATATTTGTTGGCTTCTTGGGTATGCCGATCGCTGCTGG-CTTGAAGAAAAT 3038
Query 3169 TCCCGTTTGA 3178
||||| |||
Sbjct 3039 ACCCGTGTGA 3048
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 129357690627
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5