BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G39180.1 Length=2321 Score E Sequences producing significant alignments: (Bits) Value Ahg943888 jgi|Araly1|943888|scaffold_700117.1 2693 0.0 Ahg481021 jgi|Araly1|481021|fgenesh2_kg.4__81__AT2G21540.1 950 0.0 Ahg944233 jgi|Araly1|944233|scaffold_700462.1 453 3e-126 Ahg938886 jgi|Araly1|938886|scaffold_503077.1 213 5e-54 Ahg888531 jgi|Araly1|888531|Al_scaffold_0007_517 115 1e-24 > Ahg943888 jgi|Araly1|943888|scaffold_700117.1 Length=1696 Score = 2693 bits (1458), Expect = 0.0 Identities = 1619/1696 (95%), Gaps = 13/1696 (1%) Strand=Plus/Plus Query 412 AGGACTTTAAATCATGGCGGATACAATGGTTGCTCATATGGACCGACATAATAAGATAGA 471 ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 8 AGGACTTTAAATCATGGCGGATACAATGGTTGCTCATTTGGATCGACATAATAAGATAGA 67 Query 472 TGTTGAGATCTCAGAAGATGACAAGAGATTAACAAAGCTTTGCTCTCTAAAGAAGAAGGC 531 ||||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||||| Sbjct 68 TGTTGAGATCTCAGAAGATGATAACAGATTAACAAAACTTTGCTCTCTGAAGAAGAAGGC 127 Query 532 TATAAATGCGACGAACAAGTTTAAGCACTCAATGACCAAGAAAGGTCGAAGGCATAGCCG 591 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 128 AATAAATGCGACGAACAAGTTTAAGCACTCCATGACCAAGAAAGGTCGAAGGCATAGCCG 187 Query 592 TGTGGCGTGTGTCTCAATCGTCGATGAAATCGATACAGAAGAGTTGCAAGCGGTTGATGC 651 ||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| Sbjct 188 TGTGGCGTGTGTCTCAATCGTTGATGAAATCGATACGGAAGAGCTGCAAGCGGTTGATGC 247 Query 652 TTTCCGTCAAGCTCTTATTTTAGACGAACTACTTCCCTCTAAGCATGATGATCATCACAT 711 |||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| Sbjct 248 TTTCCGTCAAGCTCTTATTTTAGACGAACTACTTCCTTCTAAACACGATGATCATCACAT 307 Query 712 GATGCTTAGGTTCTTGAGGGCAAGAAAGTTTGATCTCGAAAAGGCTAAGCAAATGTGGTC 771 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | Sbjct 308 GATGCTTAGGTTCTTGAGGGCAAGAAAGTTTGATCTCGAAAAGGCGAAGCATATGTGGGC 367 Query 772 TGATATGCTTAACTGGAGGAAAGAATATGGCGCAGACACGATCATGGAGGACTTTGATTT 831 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 368 TGATATGCTTAACTGGAGGAAAGAATATGGCGCAGACACGATCATGGAGGACTTTGATTT 427 Query 832 CAAAGAAATCGAAGAAGTGGTTAAGTATTATCCACAAGGATATCATGGTGTTGACAAGGA 891 |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 428 CAAAGAAATCGACGAAGTGGTTCAGTATTATCCACAAGGATATCATGGTGTTGACAAGGA 487 Query 892 AGGAAGACCTATCTATATTGAGAGGCTAGGCCAAGTTGATGCCACAAAGCTGATGAAAGT 951 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 488 AGGAAGACCTATCTATATTGAGAGGCTAGGCCAAGTTGATGCCACAAAGCTGATGAAAGT 547 Query 952 GACCACAATTGATAGGTACGTGAAGTACCATGTGAAAGAGTTCGAGAAGACTTTCAACGT 1011 |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 548 GACCACAATTGATAGGTATGTGAAGTACCATGTCAAAGAGTTCGAGAAGACTTTCAACGT 607 Query 1012 CAAATTCCCTGCTTGTTCCATCGCTGCGAAACGACACATTGATCAGAGCACAACGATCTT 1071 ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 608 CAAATTCCCGGCTTGTTCCATCGCTGCGAAAAGACACATTGATCAGAGCACAACGATCTT 667 Query 1072 GGATGTTCAAGGCGTGGGGCTTAGTAACTTCAACAAAGCTGCAAAAGATCTTCTTCAGAG 1131 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 668 GGATGTTCAAGGCGTGGGGCTTAATAACTTCAACAAAGCTGCAAAAGATCTTCTTCAGAG 727 Query 1132 TATTCAGAAAATCGACAACGATAACTACCCTGAGACGCTGAACCGTATGTTCATCATCAA 1191 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 728 TATTCAGAAAATCGACAACGATAACTACCCGGAGACGCTGAACCGTATGTTCATCATCAA 787 Query 1192 TGCTGGTTGTGGGTTTAGGCTTTTATGGAACACAGTGAAATCTTTCCTTGACCCAAAGAC 1251 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 788 TGCTGGTTATGGGTTTAGGCTTTTATGGAGCACAGTGAAATCTTTCCTTGACCCAAAGAC 847 Query 1252 TACAGCAAAGATTCACGTTCTTGGCAACAAATACCAAACCAAACTTCTAGAAATCATTGA 1311 |||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||||| Sbjct 848 TACAGCGAAGATTCACGTTCTTGGCAACAAATACCAAAGCAAACTGCTAGAAATCATTGA 907 Query 1312 CGCCAATGAACTGCCTGAGTTCTTGGGTGGTAAGTGCACCTGCGCAGACAAAGGTGGATG 1371 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 908 GGCCAATGAACTGCCTGAGTTCTTGGGTGGTAAGTGCACCTGCGCAGACAAAGGTGGATG 967 Query 1372 TATGCGTTCAGACAAAGGTCCATGGAACGACCCTGAGATCTTCAAGTTGGTTCAGAACGG 1431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 968 TATGCGTTCAGACAAAGGTCCATGGAACGACCCTGAGATCTTCAAGTTGGTTCAGAACGG 1027 Query 1432 TGAAGGTAGATGCCTGCGAAGGAGCTTGTCAGGGATCGAGGAAAAGACAATCTTTGAGTA 1491 |||||| ||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct 1028 TGAAGGGAGATGCCTGCGGAGGAGCTTGTCAGGGATCGAGGAAAAGACAATCTCTGAGTA 1087 Query 1492 TAACAACGAAACAAAGAAGAAATGCGAACCAGAAGAGACTCACAAGCAATCTGCTGCGGA 1551 ||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| Sbjct 1088 TAACAACGAAACAAAGAAGAAATGCGAACCAGACGAGACTTACAAGCAATCTGCTGCGGA 1147 Query 1552 GATGGAGAAGAAGTTCATCGACACGAATGTGGATGCTGCAGCGGCTGCTGATTGGCCTAC 1611 || |||||||||||||||||||| ||||||||||||||| || |||||||||| Sbjct 1148 GAAGGAGAAGAAGTTCATCGACAAGAATGTGGATGCTGC------TG---ATTGGCCTAC 1198 Query 1612 AAAGCTTAACAAGGCTGaaaaa-aaCCCTACCGACCTTAAAGATGTGTACTCAGCTGTGA 1670 |||| || |||||||| || || ||| ||||||| ||||||||||||||||| ||||||| Sbjct 1199 AAAGATTCACAAGGCT-AACAACAACTCTACCGAGCTTAAAGATGTGTACTCGGCTGTGA 1257 Query 1671 ATCCGTTGGAGAGGAAAGGGTACTTATATGGCAGCGTCATGGCATTGCTAATGGGGATAG 1730 ||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 1258 ATCCGTTGGAGAGGAGAGGGTACTTATATGGAAGCGTGATGGCATTGCTAATGGGGATAG 1317 Query 1731 TGGGAGTGATGAGGCTAACCAAGAACATGCCAAGGAGGCTCACCGAGGCAAATGTTTATA 1790 |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||| Sbjct 1318 TGGGAGTGATGAGGCTAACCAAGAACATGCCAAGGAAGCTCACCGAGGCAAATGTGTATA 1377 Query 1791 GCCGTGAAGGCAGCGCCGTCTACCAGGACGGAGTGACTGTTATGTCGAAGCAGGAGTATA 1850 |||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||| Sbjct 1378 GCCGCGAAGGCAGCGCCGTGTACCAGGACGGAGTGACTGTTATGTCGAGGCAGGAGTATA 1437 Query 1851 TTGCGATGGTGAAGAAGATAACAGATCTTGAGGAGAAATGTAAGTCCATGGAAGCTCAGG 1910 | |||||||||||||| || |||||||| |||||||| |||||||||||||||||||||| Sbjct 1438 TGGCGATGGTGAAGAAAATGACAGATCTCGAGGAGAAGTGTAAGTCCATGGAAGCTCAGG 1497 Query 1911 CTGCGTTTT-ATATGGAGAGGGAGAAGACTCTAGACGCTGCACTTCGTCGTATTGACCAG 1969 ||||||||| | ||||||||||||||| |||||||||||||||||||||| |||||||| Sbjct 1498 CTGCGTTTTCAC-TGGAGAGGGAGAAGATTCTAGACGCTGCACTTCGTCGTGTTGACCAG 1556 Query 1970 CTCGAGCTTCAGTTGTCTGAAACCAACAAGGCACTAGACGAGACAATGACGAGGCAACAT 2029 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1557 CTCGAGCTTCAGTTGTCTGAAACCAACAAGGCACTGGACGAGACAATGACGAGGCAACAT 1616 Query 2030 GAGATAATGGCTTTCATCGAGAAGAAAAAGAAGAAGAAGCGGAAGTTCTTATTATTCTAG 2089 ||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||| Sbjct 1617 GAGATAATGGCTTACATCGAGAAGAAAAAGAAGAAGAAGAGAAAGTTCTTATTATTCTAG 1676 Query 2090 AAGACTGCATCAGAGG 2105 |||||||||||||||| Sbjct 1677 AAGACTGCATCAGAGG 1692 > Ahg481021 jgi|Araly1|481021|fgenesh2_kg.4__81__AT2G21540.1 Length=2055 Score = 950 bits (514), Expect = 0.0 Identities = 902/1087 (83%), Gaps = 35/1087 (3%) Strand=Plus/Plus Query 414 GACTTTAAATCATGGCGGATACAATGGT-TGCTCATATGGACCGACATAATAAGATAGAT 472 |||| |||| |||| |||||||||| || | |||||||||| |||||||||||| ||||| Sbjct 165 GACTATAAAGCATGACGGATACAAT-GTCTACTCATATGGATCGACATAATAAGCTAGAT 223 Query 473 GT-TGA-GATCTCAGAAGATGACAAGAGATTA-ACAAAGCTTTGCT-CTCTAAAGAAGAA 528 | ||| | ||| || ||||| || ||| | ||||||||||| | || | |||||||| Sbjct 224 -TATGATG-GCTCGGAGGATGA-AA-AGA--AGACAAAGCTTTGTTCCT-TGAAGAAGAA 276 Query 529 GGCTATAAATGCGACGAACAAGTTTAAGCACTCAATGACCAAGA-AAGGTCGAAGGCATA 587 || || ||||| | ||||| || || ||||| | ||||||| || ||||||| | | Sbjct 277 AGCAATCAATGCCTCCAACAAATTCAAACACTCTTTCACCAAGAGAA-CTCGAAGGAACA 335 Query 588 GCCGTGTGGCGTGTGTCTCAATCGTCGATGAAATCGATAC-AGAAGAG-TTGCAAGCGGT 645 |||| || || |||||| ||||| || || || ||| | |||||| || ||||| || Sbjct 336 GCCGAGTCATGTCTGTCTCTATCGTTGACGACATTGAT-CTTGAAGAGCTT-CAAGCTGT 393 Query 646 TGATGCTTTCCGTCAAGCTCTTATTTTAGACGAACTACTTCCCTCTAAGCATGATGATCA 705 ||| |||||||||||||||||||| || ||||| || ||||| || || || |||||||| Sbjct 394 TGACGCTTTCCGTCAAGCTCTTATCTTGGACGAGCTCCTTCCTTCGAAACACGATGATCA 453 Query 706 TCACATGATGCTTAGGTTCTTGAGGGCAAGAAAGTTTGATCTCGA-AAAGGCTAAGCAAA 764 |||||||||||||||||| ||||||||||| ||||||||||| || ||| || ||||||| Sbjct 454 TCACATGATGCTTAGGTTTTTGAGGGCAAGGAAGTTTGATCTTGACAAA-GCAAAGCAAA 512 Query 765 TGTGGTCTGATATGCTTAACTGGAGGAAAGAATATGGCGCAGACACGATCATGGAGGACT 824 ||||| |||||||| | | ||||||||||| | ||| | ||||| ||||||||||||| Sbjct 513 TGTGGACTGATATGATCCATTGGAGGAAAGAGTTTGGTGTTGACACAATCATGGAGGACT 572 Query 825 TTGATTTCAAAGAAATCGAAGAAGTGGTTAAGTATTATCCACAAGGATATCATGGTGTTG 884 |||||||||| ||||| || ||||| | ||||| ||||| ||||| || |||||||||| Sbjct 573 TTGATTTCAAGGAAATAGACGAAGTCCTCAAGTACTATCCTCAAGGTTACCATGGTGTTG 632 Query 885 ACAAGGAAGGAAGACCTATCTATATTGAGAGGCTAGGCCAAGTTGATGCCACAAAGCTGA 944 |||| || ||||| ||| | || || ||||||||||||||||| |||||||||||||||| Sbjct 633 ACAAAGAGGGAAGGCCTGTTTACATAGAGAGGCTAGGCCAAGTGGATGCCACAAAGCTGA 692 Query 945 TGAAAGTGACCACAATTGATAGGTACGTGAAGTACCATGTGAAAGAGTTCGAGAAGACTT 1004 || |||| || || || |||||||| || ||||||||||||| |||||| |||||||||| Sbjct 693 TGCAAGTCACTACCATCGATAGGTATGTCAAGTACCATGTGAGAGAGTTTGAGAAGACTT 752 Query 1005 TCAACGTCAAATTCCCTGCTTGTTCCATCGCTGCGAA-ACGACACATTGATCAGAGCACA 1063 |||| ||||||| || ||||| ||||| ||||| || | | || |||||||||||||| Sbjct 753 TCAATATCAAATTACCAGCTTGCTCCATTGCTGCCAAGAAG-CATATTGATCAGAGCACC 811 Query 1064 ACGATCTTGGATGTTCAAGGCGTGGGGCTT--AGTAACTTCAACAAAGCTGCAAAAGATC 1121 || ||||||||||| |||||||||||| || || ||||||| || ||||||| |||| Sbjct 812 ACCATCTTGGATGTGCAAGGCGTGGGG-TTGAAG-AACTTCAGTAAGGCTGCAAGGGATC 869 Query 1122 TTCTTCAGAGTATTCAGAAAATCGACAACGATAACTACCCTGAGACGCTGAACCGTATGT 1181 |||||||| |||| ||||| ||||| | ||| |||||||||||||| |||||||||||| Sbjct 870 TTCTTCAGCGTATCCAGAAGATCGATAGCGACAACTACCCTGAGACATTGAACCGTATGT 929 Query 1182 TCATCATCAATGCTGGTTGTGGGTTTAGGCTTTTATGGAACACAGTGAAATCTTTCCTTG 1241 |||| ||||| ||||||| ||| || |||||| | |||| ||| |||||||||||||||| Sbjct 930 TCATTATCAACGCTGGTTCTGGATTCAGGCTTCTGTGGAGCACTGTGAAATCTTTCCTTG 989 Query 1242 ACCCAAAGACTACAGCAAAGATTCACGTTCTTGGCAACAAATACCAAACCAAACTTCTAG 1301 |||||||||| || |||||||| |||||||||||||||||||| |||| ||| ||||| | Sbjct 990 ACCCAAAGACCACCGCAAAGATCCACGTTCTTGGCAACAAATATCAAAGCAAGCTTCTTG 1049 Query 1302 AAATCATTGACGCCAATGAACTGCCTGAGTTCTTGGGTGGTAAGTGCACCTGCGCAGACA 1361 | || || ||| |||||||||| |||||||||||||||||||| ||||| || ||||||| Sbjct 1050 AGATTATCGACTCCAATGAACTTCCTGAGTTCTTGGGTGGTAACTGCACTTGTGCAGACA 1109 Query 1362 AAGGTGGATGTATGCGTTCAGACAAAGGTCCATGGAACGACCCTGAGATCTTCAAGTTGG 1421 ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct 1110 AAGGTGGGTGTATGCGTTCAGACAAAGGTCCATGGAACGACCCTGACATCTTCAAGATGG 1169 Query 1422 TTCAGAACGGTGAAGGTA-GATGCCTGCGAAGGA-G-C-TTGTCAGGGATCGAGGAAAAG 1477 |||| ||||| ||||| | | |||| | ||||| | | |||||| || || || ||| Sbjct 1170 TTCAAAACGGAGAAGGGAAG-TGCC--C-AAGGAAGACATTGTCAAACATTGAAGAGAAG 1225 Query 1478 ACAATCT 1484 ||||||| Sbjct 1226 ACAATCT 1232 > Ahg944233 jgi|Araly1|944233|scaffold_700462.1 Length=1672 Score = 453 bits (245), Expect = 3e-126 Identities = 636/822 (77%), Gaps = 38/822 (5%) Strand=Plus/Plus Query 632 GAGTTGCAAGCGGTTGATG-CTTTCCGTCAAGCTCTTATTTTAGACGAACTACTTCCC-T 689 |||||| |||| ||||||| |||| || ||| | |||||| | || || |||| |||| Sbjct 174 GAGTTGAAAGCCGTTGATGCCTTT-CGCCAATCGCTTATTCTCGATGAGCTAC-TCCCGG 231 Query 690 CTAAGCATGATGATC-ATCACATGATGCTTAGGTTCTTGAGGGCAAGAAAGTTTGATCTC 748 || || || || | | || ||||||||||| || |||| ||||||||| |||||||| Sbjct 232 AGAAACACGACGA-CTACCATATGATGCTTAGATTTTTGAAGGCAAGAAAATTTGATCTT 290 Query 749 GA-AAAGGCTAAGCAAATGTGGTCTGATATGCTTA-ACTGGAGGAAAGAATATGGCGCAG 806 || ||| | || || |||||| |||| ||||||| | ||||||||||||| ||| || | Sbjct 291 GAGAAA-ACCAAACAGATGTGGACTGAAATGCTTAGA-TGGAGGAAAGAATTTGGTGCTG 348 Query 807 ACAC-GATCATGGAGGACTTTGATTTCAAAGAAATCGAAGAAGTGGTT-AAGTATTATCC 864 |||| | |||||||||| ||||||||||| ||||| || ||||| ||| || || || || Sbjct 349 ACACTG-TCATGGAGGAGTTTGATTTCAAGGAAATTGATGAAGT-GTTGAAATACTACCC 406 Query 865 ACAAGGATATCATGGTGTTGACAAGGAAGGAAGACCTATCTATATTGAGAGGCTAGGCCA 924 |||||| | ||||| ||||||||||||||| ||||| | || ||||||||||| || Sbjct 407 TCAAGGACACCATGGAGTTGACAAGGAAGGACGACCTGTGTACATTGAGAGGCTTGGTTT 466 Query 925 AGTTGA-TGCCACAAAGCTGATGAAAGTGACCACAATTGATAGGTACGTGAAGTACCATG 983 ||| || | | || ||| ||||| |||| || || || |||||||| || || ||||||| Sbjct 467 AGTAGACT-CTACCAAGTTGATGCAAGTCACAACCATGGATAGGTATGTTAACTACCATG 525 Query 984 TGAAAGAGTTCGAGAAGACTTTCAACGTCAAATTCCCTGCTTGTTCCATCGCTGCGAAAC 1043 | | ||||| |||| ||| ||||| || || ||||| || || || ||||| || ||| Sbjct 526 TTATGGAGTTTGAGAGGACCTTCAATGTTAAGTTCCCAGCGTGCTCTATCGCCGC-AAA- 583 Query 1044 G-A-CACATTGATCAGAGCACAACGA-TCTTGGATGTTCAAGGCGTGGGGCTTAGTAACT 1100 | | || |||||||| |||||||| | |||| ||||| ||||| ||||| || | |||| Sbjct 584 GAAGCATATTGATCAAAGCACAACTATTCTT-GATGTCCAAGGAGTGGGACTCAAAAACT 642 Query 1101 TCAACAAAGCTGCAAAAGATCTT-CTTCA-GAGTATTCAGAAA-ATCGACAACGATAACT 1157 ||||||| ||||||| ||| ||| || | || |||| ||| |||| || |||| Sbjct 643 TCAACAAGGCTGCAAGAGA-CTTGATT-ACTCGTCTTCA-AAAGGTCGATGGTGACAACT 699 Query 1158 ACCCTGAGACGC-TGAACCGTATGTTCATCATCAATGCTGGTTGTGGGTTTAGGCTTTTA 1216 | |||||||| | ||||| | ||||| |||||||||||||| | || || || | || Sbjct 700 ATCCTGAGAC-CTTGAACAGGATGTTTATCATCAATGCTGGCTCAGGATTCAGAATGTTG 758 Query 1217 TGGAACACAGTGAAATCTTTCCTTGACCCAAAGACTACAGCAAAGATTCACGTTCTTGGC 1276 |||||||| || || || ||||||||||||||||||||||||||||| || ||||||||| Sbjct 759 TGGAACACGGTTAAGTCCTTCCTTGACCCAAAGACTACAGCAAAGATCCATGTTCTTGGC 818 Query 1277 AACAAATACCAAACCAAACTT-CTAGAAATCATTGACGCCAATGAACTGCCTGAGTT-CT 1334 ||||| ||||||| ||| || || || |||||||| | | |||||| ||||| || || Sbjct 819 AACAAGTACCAAAGCAAG-TTGCTTGAGATCATTGATGATAGTGAACTTCCTGAATTTCT 877 Query 1335 TGGGTGGTA-AGTGCACCTGCGCAGACAAAGGTGGATGTATGCGTTCAGACAAAGGTCCA 1393 ||| ||| | || || || || ||||| ||||| || ||||| || |||||||| ||| Sbjct 878 TGGA-GGTTCA-TGTACATGTGCTGACAATGGTGGCTGCATGCGCTCTGACAAAGGCCCA 935 Query 1394 TGGAACGACCCTGAGATCTTCAAGTTG-GTTCAGAACGGTGA 1434 ||||| | || |||||| | ||| | ||||| || ||||| Sbjct 936 TGGAAAAATCCAGAGATCATGAAGA-GAGTTCACAATGGTGA 976 > Ahg938886 jgi|Araly1|938886|scaffold_503077.1 Length=232 Score = 213 bits (115), Expect = 5e-54 Identities = 191/225 (85%), Gaps = 16/225 (7%) Strand=Plus/Plus Query 97 GACTGATCACTGATGTGCTTTCCTTCTCTCGTGACAACAATCTTCAATCAATCGAGTTCA 156 |||||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||| Sbjct 9 GACTGATCACTGATGTGCTTTCGATCTCTCGTGAAAAC-ATCTTCAATCAATCGAGTTCA 67 Query 157 CTTTTTAGTTCGTGACTCCCTAATTTCACACGATCAAAGATCTCGCCACCGAAACGCTTT 216 ||||||||||||| |||||||||||||||||||| ||||||||| |||| ||||||||| Sbjct 68 GTTTTTAGTTCGTGTCTCCCTAATTTCACACGATCTAAGATCTCGTCACCAAAACGCTTT 127 Query 217 CACCCAA-G-GATTCTTTCAACGGCGGCGAAGGATATGATTACACGACGGAGAAGGACGA 274 |||| || | ||| |||| ||| ||| ||||| ||| ||| | ||| |||| Sbjct 128 CACCGAAGGAGATGGTTTC-ACGACGGAGAAGG--ATG------CGA--G-GAA-GACGG 174 Query 275 TGGCCAAGAGAGGGATAGTGAAATTGACGACCAGTTGGCAGATTC 319 |||| |||||||||||||||||||||||||||| || |||| ||| Sbjct 175 TGGCGAAGAGAGGGATAGTGAAATTGACGACCAATTAGCAGGTTC 219 > Ahg888531 jgi|Araly1|888531|Al_scaffold_0007_517 Length=294 Score = 115 bits (62), Expect = 1e-24 Identities = 102/119 (86%), Gaps = 11/119 (9%) Strand=Plus/Plus Query 203 CACCGAAACGCTTTCACCCAAGGATTCTTTCAACGGCGGCGAAGGATATGATTACACGAC 262 |||||||||||||||||| ||||||||||| |||||| ||||||| ||||||||||||| Sbjct 174 CACCGAAACGCTTTCACCGGAGGATTCTTTCGACGGCGACGAAGGAGATGATTACACGAC 233 Query 263 -G-GA--GA----A-G--GACGATGGCCAAGAGAGGGATAGTGAAATTGACGACCAGTT 310 | || || | | ||||||||| ||||||||||||||||||||||||||||||| Sbjct 234 GGAGACGGATGCGAGGAAGACGATGGCGAAGAGAGGGATAGTGAAATTGACGACCAGTT 292 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 87417112275 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5