BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT4G39480.1 Length=1952 Score E Sequences producing significant alignments: (Bits) Value Ahg943924 jgi|Araly1|943924|scaffold_700153.1 2499 0.0 Ahg943925 jgi|Araly1|943925|scaffold_700154.1 1650 0.0 Ahg481190 jgi|Araly1|481190|fgenesh2_kg.4__250__AT2G23180.1 1474 0.0 > Ahg943924 jgi|Araly1|943924|scaffold_700153.1 Length=1589 Score = 2499 bits (1353), Expect = 0.0 Identities = 1507/1582 (95%), Gaps = 7/1582 (0%) Strand=Plus/Plus Query 292 TTCTCACTAATGGCTTTGGTCAGCTTACTTGAAATCTCCATTGCTTTCTTTTGTTTCCTT 351 ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 13 TTCTCCCTAATGGCTTTGGTCAGCTTACTCGAAATCTCCATTGCTTTCTTTTGTTTCCTT 72 Query 352 ATCTTTCGAATTTTCCTGATCAGCAAGAAACCACACCGTTCATTTCTCACAAACTGGCCG 411 ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 73 ATCTTTCAAATTTTCCTGATCAGCAAGAAACCGCACCGTTCATTTCTCACAAACTGGCCG 132 Query 412 CTCCTGGGCATGCTTCCGGGTTTACTTACCGTGCTCCCTCGAGTTTACGACTTTATAACC 471 ||||| || |||||||||||||||||| || ||||||||| || || ||||||||||| Sbjct 133 CTCCTCGGTATGCTTCCGGGTTTACTTCCCCAGCTCCCTCGTGTCTATGACTTTATAACT 192 Query 472 GAGGTTCTTGAGGACGGCAACTTAAACTATCTTTTCATAGGCCCTTTTTTAGGGGGCATC 531 ||||||||||||||||| ||||||||||||||||||| ||| |||||||| ||||||||| Sbjct 193 GAGGTTCTTGAGGACGGGAACTTAAACTATCTTTTCAAAGGACCTTTTTTGGGGGGCATC 252 Query 532 GACATGTTGTTCACCGTTGATCCTGCTAATATCCATCACATCATGAGCTCAAACTTTGCG 591 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 253 GACATGTTGTTCACCGTTGATCCTGCTAATATCCACCACATCATGAGCTCAAACTTTGCG 312 Query 592 AATTACCCGAAAGGAACCGAATTCAAGAAGTTATTTGACGTTTTGGGAGATGGGATTTTC 651 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 313 AATTACCCGAAAGGAACCGAATTCAAGAAGTTATTTGACGTTTTGGGAGATGGGATTTTC 372 Query 652 AACGCGGATTCAGATTTGTGGAAGGATCTAAGGAAATCTTCTCAAAGCATGATGAATCAT 711 |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct 373 AACGTGGATTCAGAGTTGTGGAAGGATCTAAGGAAATCTTCTCAAAGCATGATGAATGAT 432 Query 712 CCCGATTTTCAAAGGTTTTCATTAGCTACAAGCTTGAGTAAGCTAGAGAAAGGGCTTGTG 771 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 433 CCCGATTTTCAAAGGTTTTCATTAGCTACAAGCTTGAGTAAGCTAGAGAAAGGGCTTGTT 492 Query 772 CCACTTCTTGATCATGTTGCTAAAGAGAAACTCGTCGTGGACTTACAAGATGTTTTCCAA 831 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 493 CCACTTCTTGATCATGCTGCTAAAGAGAAACTCGTCGTGGACTTACAAGATGTTTTCCAA 552 Query 832 AGATTCACGTTTGACACTACCTTTGTTTTAGCAACCGGGTATGATCCAGGTTGTCTCTCG 891 |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| Sbjct 553 AGATTCACGTTTGACACTACGTTTGTTTTAGCAACCGGATATGATCCAGGTTGTCTCTCG 612 Query 892 GTGGAAATGCCGGAAATCGAGTTTGCAAGAGCCTTAGACGATGCAGAGGAAGCTATTTTC 951 || ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 613 GTCGAAATGCCGGAAATCGAGTTTGCAAGAGCTTTAGACGATGCAGAGGAAGCCATTTTC 672 Query 952 TACAGACATTTCAAGCCGGAGGTGGTGTGGAAGATGCAAAGATTGATTGGGGTTGGAGCT 1011 ||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| | Sbjct 673 TACAGACATGTCAAGCCGGAGATGGTGTGGAAGATGCAAAGATGGATTGGGGTTGGAGAT 732 Query 1012 GAGTTGAAGCTGAAAAGAGCTCACGCGATTTTCGATCGTGTTTGCTCTAAGTGCATAGCT 1071 ||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||| Sbjct 733 GAGTTGAAGCTGAAAAGAGCTCACGCGGTTTTCAATCGTGTTTGCTCTGAGTGCATAGCT 792 Query 1072 TCTAAGAGAGATGAGATCAGCCAAGGG-ATTGATTCTTCTTCTTCTAAAGATTTGTTGAT 1130 ||||||||||||||||||| || |||| | | ||||||||||||||| ||||||||||| Sbjct 793 TCTAAGAGAGATGAGATCAACCGAGGGGACGG-TTCTTCTTCTTCTAATGATTTGTTGAT 851 Query 1131 GTCTTCTATAAATGTTGACACGACTAAGTACAAGTTGTTGAATCCAAGTGATGACAGATT 1190 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 852 GTCTTCTTTAAATGTTGACACGACTAAGTACAAGTTGTTGAATCCAAGTGATGACAGATT 911 Query 1191 CCTTAGAGACACAATCTTGTCCTTCATGTTAGCTGGTAGAGACACAACAGGCTCAGCGCT 1250 |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||| Sbjct 912 CCTTAGAGACACAATCCTGTCCTTCATGTTAGCTGGCAGAGACACGACAGGCTCAGCGCT 971 Query 1251 CACTTGGTTCTTCTGGCTTCTATGCAATAACCAAGAAGCCATGACCAAGATTCGTCAAGA 1310 ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct 972 CACTTGGTTCTTCTGGCTTCTATGCAAAAACCAAGAAGCCATGGCCAAGATTCGTCAAGA 1031 Query 1311 AATCAACACAAATCTATTTCCAAGAAACAAGACCGACGACGGTTCTGTTTCTTATGATTC 1370 |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct 1032 AATCAACACAAATCTATTTCCAAGAAACAAGA---ATGACGGTTCTGTTTCTTATGATTC 1088 Query 1371 TGATTCATTCAATCCCCAAGAGG-TAAAGAAGTTGGTGTATTTACACGGCGCGGTTTGTG 1429 |||||||||||||||||||| || |||||||||||||||||||||||||||| |||||| Sbjct 1089 TGATTCATTCAATCCCCAAG-GGATAAAGAAGTTGGTGTATTTACACGGCGCAATTTGTG 1147 Query 1430 AAGCCCTCAGGCTCTATCCACCTGTTCCCTTTAACCACAAGTCTCCTGCTAAACCCGACG 1489 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1148 AAGCCCTCAGGCTCTATCCACCTGTTCCCTTTAACCACAAGTCTCCTACTAAACCCGACG 1207 Query 1490 TGCTTCCAAGCGGCCACAAAGTCAAGGCCAATTCGAGGATTTTGTTCTGTCTTTACTCAT 1549 | ||||||||||||||||||||||| |||||||||| || ||||||||||||||||||| Sbjct 1208 TCCTTCCAAGCGGCCACAAAGTCAAAGCCAATTCGAAAATATTGTTCTGTCTTTACTCAT 1267 Query 1550 TAGGGAGAATGAAATCGGTTTGGGGAGAAGATGCAATGGAATTTAAACCGGAGAGATGGA 1609 ||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct 1268 TAGGGAGAATGAAATCGGTTTGGGGAGAAGATGCATTGGAATTCAAACCGGAGAGATGGA 1327 Query 1610 TTTCTGAGAGTGGAAGATCGGTACATGAGCCATCTTATAAGTTCCTATCGTTTAACGCCG 1669 ||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||| | Sbjct 1328 TTTCTGAGAGTGGAAGATCGGTACACGAGCCATCTTATAAGTTCTTATCATTTAACGCAG 1387 Query 1670 GTCCAAGAACTTGTTTGGGGAAAGAAGTGGCTATGACGCAAATGAAGACAGTGGCTGTGA 1729 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1388 GTCCAAGAACTTGTTTGGGGAAAGAAGTGGCTATGATGCAAATGAAGACAGTGGCTGTGA 1447 Query 1730 AAATCATACAAAATTATGACATTAATGTCGTTGAAGGGCACAAGATCAAGCCAGCTCCTT 1789 ||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1448 AAATCATACAAAACTATGAGATTAATGTCGTTGAAGGGCACAAGATCAAGCCAGCTCCTT 1507 Query 1790 CGGTTATTCTCCACATGAAGCATGGTCTTAAAGTCACTGTCTCTAAAAGATGTTTGTCTT 1849 ||||||| ||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct 1508 CGGTTATCCTCCACATGAAGCATGGTCTTAAAGTCACAGTCTCTAAAAGATGTTGGTCTT 1567 Query 1850 GAATGTTTTAACTAGAATGTAG 1871 ||||||||||||||||| |||| Sbjct 1568 GAATGTTTTAACTAGAAAGTAG 1589 > Ahg943925 jgi|Araly1|943925|scaffold_700154.1 Length=1601 Score = 1650 bits (893), Expect = 0.0 Identities = 1365/1589 (86%), Gaps = 47/1589 (3%) Strand=Plus/Plus Query 298 CTAATGGCTTTGGTCAGCTTACTTGAAATCTCCATTGCTTTCTTTTGTTTCCTTATCTTT 357 |||||||||||| | ||||| |||||||||||||||||||||||||||| || |||| Sbjct 19 CTAATGGCTTTGATAAGCTTGTTTGAAATCTCCATTGCTTTCTTTTGTTTTCTCCTCTTC 78 Query 358 CGA-ATTTTCCTGATCAGCAAGAAACCACACCGTTCATTT-CTC-ACAAACTGGCCGCTC 414 ||| |||| | |||||| ||||||||| |||||| | | | | | ||||||||||| || Sbjct 79 CGATATTT-CTTGATCAACAAGAAACCTCACCGT-C-TGTGCCCCACAAACTGGCCATTC 135 Query 415 CTGGGCATGCTTCCGGGTTTACTTACCGTGCTCCCTCGAGTTTACGACTTTATAACCGAG 474 || || ||| |||||||||| || || | ||| ||| ||||||||||||||||||||| Sbjct 136 CTTGGTATGATTCCGGGTTTGCTCGTCGAGATCCATCGTGTTTACGACTTTATAACCGAG 195 Query 475 GTTCTTGAGGACGGCAACT-TAAACTATCTTTTCATAGGCCCTTTTTTAGGGGGCATCGA 533 |||| |||| | ||| | ||| ||||| || ||||||||| | ||| | | |||| Sbjct 196 ATTCTCGAGGTCA-CAAATCTAACCTATCCTTGCATAGGCCCGTGTTTCGCAAACCTCGA 254 Query 534 CATGTTGTTCACCGTTGATCCTGCTAATATCCATCACATCATGAGCTCAAACTTTGCGAA 593 |||| || |||| |||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 255 CATGCTGGTCACGGTTGATCCTGCTAATATCCACCACATCATGAGCTCAAACTTCGCGAA 314 Query 594 TTACCCGAAAGGAACCGAATTCAAGAAGTTATTTGACGTTTTGGGAGATGGGATTTTCAA 653 |||||||||||| ||||||||||||||||||| ||| |||||||||| ||||||||||| Sbjct 315 CTACCCGAAAGGACCCGAATTCAAGAAGTTATTCGACATTTTGGGAGACGGGATTTTCAA 374 Query 654 CGCGGATTCAGATTTGTGGAAGGATCTAAGGAAATCTTCTCAAAGCATGATGAATCA-TC 712 || ||||| || |||||||| ||||| |||||||| ||||||||||||||| | | || Sbjct 375 TGCAGATTCGGAATTGTGGAAAGATCTGAGGAAATCAGCTCAAAGCATGATGA-TGAATC 433 Query 713 CCGATTTTCAAAGGTTTTCATTAGCTACAAGCTTGAGTAAGCTAGAGAAAGGGCTTGTGC 772 |||| ||||||| |||||||||||||||||||| | ||||||||||||||||||||| | Sbjct 434 CCGAGTTTCAAAAGTTTTCATTAGCTACAAGCTCAAATAAGCTAGAGAAAGGGCTTGTCC 493 Query 773 CACTTCTTGATCATGTTGCTAAAGAGAAACTCGTCGTGGACTTACAAGATGTTTTCCAAA 832 |||||||||| ||||||||||||||||||||||| |||||||| ||||| | ||||||| Sbjct 494 CACTTCTTGACCATGTTGCTAAAGAGAAACTCGTTGTGGACTTGCAAGACATGTTCCAAA 553 Query 833 GATTCACGTTTGACACTACCTTTGTTTTAGCAACCGGGTATGATCCAGGTTGTCTCTCGG 892 |||||||||| ||||| || ||||||||||| ||||||||||||||||| |||||||| | Sbjct 554 GATTCACGTTCGACACCACATTTGTTTTAGCGACCGGGTATGATCCAGGCTGTCTCTCCG 613 Query 893 TGGAAATGCCGGAAATCGAGTTTGCAAGAGCCTTAGACGATGCAGAGGAAGCTATTTTCT 952 | |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| Sbjct 614 TCGAAATGCCGGAAGTCGAGTTTGCAAGAGCTTTAGACGATGCAGAGGAAGCTATTTTCT 673 Query 953 ACAGACATTTCAAGCCGGAGGTGGTGTGGAAGATGCAAAGATTGATTGGGGTT-GGAGCT 1011 ||||||| |||| || ||| | |||||| | ||||| | ||| ||||| || |||| | Sbjct 674 TCAGACATATCAAACCAGAGATCTTGTGGAGGCTGCAAGGCTTGCTTGGG-TTAGGAGAT 732 Query 1012 GAGTTGAAGCTGAA-AAGAGCTCACGCGATTTTCGATCGTGTTTGCTCTAAGTGCATAGC 1070 ||| |||| ||| || ||||| ||||| ||| |||||||||||||| |||| |||||| Sbjct 733 GAGAAGAAGATGACGAA-AGCTCGCGCGACTTTAGATCGTGTTTGCTCCAAGTACATAGC 791 Query 1071 TTCTAAGAGAGATGAGATCAGCCAAGGGATTGAT--TCTTC-TTCT--T-CTAAAGATTT 1124 | | |||||||||||| | |||| |||| | | | || |||| | |||||||||| Sbjct 792 TACAAAGAGAGATGAGGTAAGCCGTGGGACTAACAATGTTGATTCTCATTCTAAAGATTT 851 Query 1125 GTTGATGTCTT-CTATAAATGTTG-ACACGACTAAGTACAAGTTGTTGAATCCAAGTGAT 1182 | ||| ||||| | || ||| ||| | ||||| |||||||||||| |||||||||||||| Sbjct 852 GCTGACGTCTTAC-ATGAAT-TTGGATACGACCAAGTACAAGTTGCTGAATCCAAGTGAT 909 Query 1183 GACAGATTCCTTAGAGACACAATCTTGTCCTTCATGTTAGCTGGTAGAGACACAACAGGC 1242 || |||||||| ||||||||||||||| ||||||||||||| ||| ||||||| ||||| Sbjct 910 GAAAGATTCCTCAGAGACACAATCTTGACCTTCATGTTAGCGGGTCGAGACACGACAGGA 969 Query 1243 TCAGCG-CTCACTTGGTTCTTCTGGCTTCT-ATGCAATAACCAAGAAGCCAT-GACCAAG 1299 || | | ||||||||||||||||||||||| || || | || ||||| ||| | ||||| Sbjct 970 TCTG-GACTCACTTGGTTCTTCTGGCTTCTCATT-AAGACCCCAGAAGTCATTG-CCAAG 1026 Query 1300 ATTCGTCAAGAAATCAACACAAATCTATTTCCAAGAAACAAG---ACCGAC-GACGGTTC 1355 |||||||||||||| ||||||||||| |||| ||||| |||| | | | || | ||| Sbjct 1027 ATTCGTCAAGAAATAAACACAAATCTGTTTCAAAGAAGCAAGGTTAATG-CTGATGCTTC 1085 Query 1356 TGTTTCTTATGATTCTGATTCATTCAATCCCCAAGAGGTAAAGAAGTTGGTGTATTTACA 1415 || | |||| |||||||||||||||||||||||| ||||||| ||||||||| |||| Sbjct 1086 TGACAATAATGACTCTGATTCATTCAATCCCCAAGAGTTAAAGAAATTGGTGTATCTACA 1145 Query 1416 CGGCGCGGTTTGTGAAGCCCTCAGGCTCTATCCACCTGTTCCCTTT-AACCACAAGTCTC 1474 ||||||| |||||||||||||||| ||||||||||||||||||||| ||| ||||||||| Sbjct 1146 CGGCGCGATTTGTGAAGCCCTCAGACTCTATCCACCTGTTCCCTTTCAAC-ACAAGTCTC 1204 Query 1475 CTGCTAAACCCGACGTGCTTCCAAGCGGCCACAAAGTCAAGGCCAATTCGAGGATTTTGT 1534 || | ||||| ||||| |||||||| || ||||||||| | ||||| |||| |||||||| Sbjct 1205 CTACAAAACCAGACGTTCTTCCAAGTGGACACAAAGTCGACGCCAACTCGAAGATTTTGT 1264 Query 1535 TCTGTCTTTACTCATTAGGGAGAATGAAATCGGTTTGGGGAGAAGATGCAATGGAATTTA 1594 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | Sbjct 1265 TCTGTCTTTACTCATTAGGGAGAATGAAATCGGTTTGGGGAGAAGATGCATTGGAATTCA 1324 Query 1595 AACCGGAGAGATGGATTTCTGAGAGTGGAAGAT-CGGTACATGAGCCATCTTATAAGTTC 1653 |||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||| Sbjct 1325 AACCGGAGAGATGGATTTCTGAGAGTGGAA-ATTCGGTACACGAGCCATCTTATAAGTTC 1383 Query 1654 CTATCGTTTAACGCCGGTCCAAGAACTTGTTTGGGGAAAGAAGTGGCTATGACGCAAATG 1713 ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1384 TTATCGTTTAACGCTGGTCCAAGAACTTGTTTGGGGAAAGAAGTGGCTATGACGCAAATG 1443 Query 1714 AAGACAGTGGCTGTGAAAATCATACAAAATTATGACATTAATG-TCGTTGAAGGGCA-CA 1771 |||||||||||||||||||||||||| |||||||| || || | ||||||||||||| || Sbjct 1444 AAGACAGTGGCTGTGAAAATCATACAGAATTATGAGATGAA-GATCGTTGAAGGGCAACA 1502 Query 1772 AGATCAAGCCAGCTCCTTCGGTTATTCTCCACATGAAGCATGGTCTTAAAGTCACTGTCT 1831 | ||| ||||||||||||| || |||||||||||||||||||||||||||||||| || | Sbjct 1503 A-ATCGAGCCAGCTCCTTCTGTAATTCTCCACATGAAGCATGGTCTTAAAGTCACAGT-T 1560 Query 1832 -CTAAAAGATGTTTG-TCTTGAATGTTTT 1858 |||| ||||||||| | |||| |||||| Sbjct 1561 ACTAAGAGATGTTTGGT-TTGATTGTTTT 1588 > Ahg481190 jgi|Araly1|481190|fgenesh2_kg.4__250__AT2G23180.1 Length=1648 Score = 1474 bits (798), Expect = 0.0 Identities = 1333/1585 (84%), Gaps = 61/1585 (4%) Strand=Plus/Plus Query 284 TTTCTCAATTCTCACTAATGGCTTTGGTCAGCTTACTTGAAATCTCCATTGCTTT-C-TT 341 ||||||||||||| ||||||||| | | | |||||||||| |||| ||| |||| | || Sbjct 21 TTTCTCAATTCTCTCTAATGGCTCTAATAACCTTACTTGAAGTCTCAATTTCTTTACTTT 80 Query 342 TTGTTTCCTTATCTTT-CGAAT-TTTCCTGATCAGCAAGAAACCACACCGTTCATTTCTC 399 || | ||||| |||| || || || | |||| ||||||||||| || ||||| |||||| Sbjct 81 TTATCTCCTT-CCTTTACGGATATTGCTTGATTAGCAAGAAACCTCATCGTTCGTTTCTC 139 Query 400 ACAAACTGGCCGCTCCTGGGCATGCTTCCGGGTTTACTTACCGTGCTCCCTCGAGTTTAC 459 || ||||||||| |||| || ||||||||||||||||| | | ||||||| ||||| Sbjct 140 ACTAACTGGCCGTTCCTCGGTATGCTTCCGGGTTTACTCGTGGAGATCCCTCGTGTTTAT 199 Query 460 GACTTTATAACCGAGGTTCTTGAGGACGGC-AACTTAAAC-TATCTTTTCATAGGCCCTT 517 |||| | |||||||| |||| |||| | | ||||| ||| |||| ||||| ||| || | Sbjct 200 GACTATGTAACCGAGCTTCTCGAGG-CCTCAAACTT-AACTTATCCTTTCAAAGGTCCGT 257 Query 518 TTTTAGGGGG-CATCGACATGTTGTTCACCGTTGATCCTGCTAATATCCATCACATCATG 576 ||| ||||| | ||||||||||| ||||||||||||| ||||||||||| ||||||||| Sbjct 258 ATTTCGGGGGTC-TCGACATGTTGATCACCGTTGATCCGGCTAATATCCACCACATCATG 316 Query 577 AGCTCAAACTTTGCGAATTACCCGAAAGGAACCGAATTCAAGAAGTTATTTGACGTTTTG 636 ||||||||||| |||||||||||||||||| |||| ||||||||| |||| || |||||| Sbjct 317 AGCTCAAACTTCGCGAATTACCCGAAAGGATCCGAGTTCAAGAAGATATTCGATGTTTTG 376 Query 637 GGAGATGGGATTTTCAACGCGGATTCAGATTTGTGGAAGGATCTAAGGAAATCTTCTCAA 696 |||||||| |||||||| || ||||| || || ||||| |||||||||||||| ||||| Sbjct 377 GGAGATGGCATTTTCAATGCAGATTCTGAGTTATGGAAAGATCTAAGGAAATCAGCTCAA 436 Query 697 AGCATGATGAATCATCCCGATTTTCAAAGGTTTTCA-TTAGCTACAAGCTTGAGTAAGCT 755 |||||||||| ||||| ||||||||||||||| || | || |||||| |||||||||| Sbjct 437 AGCATGATGACTCATCAAGATTTTCAAAGGTTTACACTAAG-AACAAGCATGAGTAAGCT 495 Query 756 AGAGAAAGGGCTTGTGCCACTTCTTGATCATGTTGCTAAAG-AGAAACTCGTCG-TGGAC 813 |||||||||||| || |||||||||||| | |||||| || ||||| | |||| | ||| Sbjct 496 AGAGAAAGGGCTCGTCCCACTTCTTGATTACGTTGCT-GAGAAGAAAATAGTCGCT-GAC 553 Query 814 TTACAAGATGTTTTCCAAAGATTCACGTTTGACACTACCTTTGTTTTAGCAACC-GGGTA 872 ||||||||||| ||||||||||| ||||| |||||| | ||| ||||||| ||| |||| Sbjct 554 TTACAAGATGTGTTCCAAAGATTTACGTTCGACACTTCGTTTATTTTAGCGACCGGGGT- 612 Query 873 TGATCCAGGTTGTCTCT-CG-GTGGAAATGCCGGAAATCGAGTTTGCAAGAGCCTTAGAC 930 ||||||||||||||| | || | ||||||||| ||||||||||||| ||||| |||||| Sbjct 613 TGATCCAGGTTGTCT-TGCGACT-GAAATGCCGCAAATCGAGTTTGCTAGAGCTTTAGAC 670 Query 931 GATGCAGAGGAAGCTATTTTCTACAGACATTTCAAGCCGGAGGTGGTGTGGAAGATGCAA 990 || ||||||| ||| ||||||| ||| ||| ||||||||||| |||| |||||||||||| Sbjct 671 GAAGCAGAGGCAGCAATTTTCTTCAGGCATGTCAAGCCGGAGATGGTTTGGAAGATGCAA 730 Query 991 AGATTGATTGGGGTTGGAGCTGAGTTGAAGCTGA-AAAGAGCTCACGCGATTTTCGATCG 1049 |||| |||||| |||||| |||||||||| ||| ||| ||||||| |||||||||| || Sbjct 731 GGATTTATTGGGTTTGGAGATGAGTTGAAGATGAGAAA-AGCTCACTCGATTTTCGACCG 789 Query 1050 TGTTTGCTCTAAGTGCATAGCTTCTAAGAGAGATGAGATCAGCCAA--GGG--ATTGA-T 1104 ||||||||||| ||||||||||||||||||||||| || | | || ||| ||| | Sbjct 790 AGTTTGCTCTAAATGCATAGCTTCTAAGAGAGATGAAAT-AACTAATGGGGTTATTAACA 848 Query 1105 TC--TTCTTCTTCTAAAGATTTGTTGATGTCTT-CTATAAATGTTGACACGACTAAGTAC 1161 || |||||||||||||||||||||||||||| | || | ||| || ||||| |||||| Sbjct 849 TCGACTCTTCTTCTAAAGATTTGTTGATGTCTTAC-ATGAGTGTGGATACGACCAAGTAC 907 Query 1162 AAGTTGTTGAATCCAAGTGATGACAGATTCCTTAGAGACACAATCTTGTCCTTCATGTTA 1221 ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| || Sbjct 908 AAGTTGTTGAATCCAAGTGATGACAAATTCCTTAGAGACATGATCTTAAGCTTCATGATA 967 Query 1222 GCTGGTAGAGACACAACAGGCTCAGCGCTCACTTGGTTCTTCTGGCTTCTATGCAATAA- 1280 |||||||||||||| |||||||| || |||||||||||||| |||||||| | ||| || Sbjct 968 GCTGGTAGAGACACCACAGGCTCTGCTCTCACTTGGTTCTTTTGGCTTCTCTCCAAGAAC 1027 Query 1281 CCAAGAAGCCATGACCAAGATTCGTCAAGAAATCAACACAAATCTATTTCCAAGAAACAA 1340 |||| ||||||| ||||||||||||||||||||||||||||| |||| ||||| | Sbjct 1028 CCAA-AAGCCATAACCAAGATTCGTCAAGAAATCAACACAAAACTATCGCCAAG-----A 1081 Query 1341 GACCGACGACGGTTCTGTTTCTTATGATTCTGATTCATTCAATCCCCAAGAGGTAAAGAA 1400 ||| | | | | | || ||||||||||||||||| | | |||||| |||| || Sbjct 1082 -ACC-A--A-----C-G-AT-TT-TGATTCTGATTCATTCAGTTCTCAAGAGTTAAACAA 1128 Query 1401 GTTGGTGTATTTACACGGCGCGGTT-TGTGAAGCCCTCAGGCTCTATCCACCTGTTCCCT 1459 ||||||||||||||| ||||| || ||||||||||||||||| |||||||| ||||| | Sbjct 1129 GTTGGTGTATTTACATGGCGC-ATTATGTGAAGCCCTCAGGCTATATCCACCGGTTCCAT 1187 Query 1460 TTAACCACAAGTCTCCTGCTAAACCCGACGTGCTTCCAAGCGGCCACAAAGTCAAGGCCA 1519 || | |||||||||||| | ||||| ||||| |||||||| || |||| |||| | || | Sbjct 1188 TTCAGCACAAGTCTCCTACAAAACCTGACGTTCTTCCAAGTGGACACAGAGTCGATGCGA 1247 Query 1520 ATTCGAGGATTTTGTTCTGTCTTTACTCATTAGGGAGAATGAAATCGGTTTGGGGAGAAG 1579 ||||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1248 GTTCGAAGATTGTGTTCTGTCTTTACTCATTGGGGAGAATGAAATCGGTTTGGGGAGAAG 1307 Query 1580 ATGCAAT-GGAATTTAAACCGGAGAGATGGATTTCTGAGAGTGGAAGATCGGTACATGAG 1638 ||||| | ||||||||||||||||||||||||||| ||||||||||| | | | |||| | Sbjct 1308 ATGCA-TCGGAATTTAAACCGGAGAGATGGATTTCAGAGAGTGGAAGGTTGATTCATGTG 1366 Query 1639 CCATCTTATAAGTTCCTATCGTTTAACGCCGGTCCAAGAACTTGTTTGGGGAAAGAAGTG 1698 ||||||| ||||||| ||||||| || ||||||||||| ||||||||||||||||||||| Sbjct 1367 CCATCTTTTAAGTTCTTATCGTTCAATGCCGGTCCAAGGACTTGTTTGGGGAAAGAAGTG 1426 Query 1699 GCTATGACGCAAATGAAGACAGTGGCTGTGAAAATCATACAAAATTATGACATTAATG-T 1757 || ||||| || |||||||||||||||||||||| |||||||| ||||| || || | | Sbjct 1427 GCCATGACACAGTTGAAGACAGTGGCTGTGAAAATTATACAAAACTATGAGATAAA-GAT 1485 Query 1758 CGTTGAAGGGCACAAGATCAAGCCAGCTCCTTCGGTTATTCTCCACATGAAGCATGGTCT 1817 |||||| || ||||||||| |||||| |||||| |||| || |||||||||||||| || Sbjct 1486 CGTTGATGGACACAAGATCGAGCCAGTTCCTTCTATTATCCTTCACATGAAGCATGGGCT 1545 Query 1818 TAAAGTCACTGTCTCTAAAAGATGT 1842 |||||| || ||| |||| |||||| Sbjct 1546 TAAAGTTACAGTCACTAAGAGATGT 1570 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 73361811870 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5